Query 015217
Match_columns 411
No_of_seqs 232 out of 3580
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 08:44:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us3_A Calsequestrin-1; calciu 100.0 3E-41 1E-45 317.0 32.7 313 25-375 8-353 (367)
2 1sji_A Calsequestrin 2, calseq 100.0 4.9E-40 1.7E-44 307.6 31.9 310 25-373 6-349 (350)
3 2r2j_A Thioredoxin domain-cont 100.0 1.6E-38 5.5E-43 300.6 30.2 314 30-384 5-344 (382)
4 3f8u_A Protein disulfide-isome 100.0 3.9E-37 1.3E-41 300.6 34.2 309 31-377 2-341 (481)
5 3apo_A DNAJ homolog subfamily 100.0 2.3E-37 7.9E-42 319.2 32.4 306 30-371 440-768 (780)
6 3idv_A Protein disulfide-isome 100.0 1.1E-35 3.8E-40 263.8 24.2 220 27-267 12-237 (241)
7 2b5e_A Protein disulfide-isome 100.0 3.5E-35 1.2E-39 288.2 29.7 306 23-375 7-345 (504)
8 3apo_A DNAJ homolog subfamily 100.0 3.3E-35 1.1E-39 303.2 29.4 331 25-370 111-656 (780)
9 3uem_A Protein disulfide-isome 100.0 2E-30 6.9E-35 243.8 25.1 227 30-266 117-356 (361)
10 1a8l_A Protein disulfide oxido 100.0 2.7E-30 9.1E-35 226.8 19.9 196 47-266 21-225 (226)
11 2ywm_A Glutaredoxin-like prote 100.0 1.1E-29 3.9E-34 223.2 21.0 196 46-267 18-220 (229)
12 3ed3_A Protein disulfide-isome 100.0 3.2E-28 1.1E-32 221.2 21.6 229 25-284 12-281 (298)
13 3uem_A Protein disulfide-isome 100.0 1.8E-26 6E-31 216.9 33.4 306 28-370 15-357 (361)
14 2hls_A Protein disulfide oxido 99.9 2.8E-26 9.5E-31 202.4 21.8 201 38-267 15-226 (243)
15 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.2E-23 4E-28 186.4 24.5 216 22-260 4-232 (244)
16 3ed3_A Protein disulfide-isome 99.9 8.3E-24 2.8E-28 192.1 21.8 207 156-368 13-265 (298)
17 3idv_A Protein disulfide-isome 99.9 3.4E-23 1.2E-27 183.2 23.4 206 158-370 13-237 (241)
18 1sji_A Calsequestrin 2, calseq 99.9 2.5E-23 8.6E-28 194.2 20.5 207 158-380 9-235 (350)
19 3us3_A Calsequestrin-1; calciu 99.9 4.4E-23 1.5E-27 193.4 22.1 199 158-371 11-228 (367)
20 3f8u_A Protein disulfide-isome 99.9 5.5E-22 1.9E-26 193.4 22.9 204 161-378 2-225 (481)
21 3t58_A Sulfhydryl oxidase 1; o 99.9 1.1E-21 3.9E-26 190.2 23.0 220 22-263 4-236 (519)
22 2r2j_A Thioredoxin domain-cont 99.9 6.5E-22 2.2E-26 186.8 18.6 197 160-371 5-219 (382)
23 4f9z_D Endoplasmic reticulum r 99.9 7.1E-21 2.4E-25 166.4 19.3 199 159-372 8-227 (227)
24 2h8l_A Protein disulfide-isome 99.9 1.2E-20 4.2E-25 167.6 20.9 207 158-380 4-239 (252)
25 2b5e_A Protein disulfide-isome 99.9 1.1E-20 3.9E-25 185.1 21.0 224 32-267 223-467 (504)
26 3h79_A Thioredoxin-like protei 99.9 6.9E-21 2.4E-25 150.8 13.4 112 23-134 8-126 (127)
27 3ec3_A Protein disulfide-isome 99.8 1.6E-19 5.5E-24 160.0 21.0 202 158-375 4-233 (250)
28 3q6o_A Sulfhydryl oxidase 1; p 99.8 5.7E-19 2E-23 156.2 23.4 205 158-368 10-238 (244)
29 4f9z_D Endoplasmic reticulum r 99.8 4.3E-19 1.5E-23 155.0 21.4 206 30-267 9-225 (227)
30 2dml_A Protein disulfide-isome 99.8 8.9E-20 3E-24 145.0 13.6 114 23-136 10-124 (130)
31 3gnj_A Thioredoxin domain prot 99.8 7.4E-20 2.5E-24 141.1 11.8 107 29-135 3-109 (111)
32 3zzx_A Thioredoxin; oxidoreduc 99.8 6.5E-20 2.2E-24 139.3 10.1 100 33-134 3-104 (105)
33 1a8l_A Protein disulfide oxido 99.8 8.6E-19 2.9E-23 153.3 18.2 184 178-369 22-225 (226)
34 2trx_A Thioredoxin; electron t 99.8 1.4E-19 4.8E-24 138.8 11.6 106 30-135 2-107 (108)
35 2qsi_A Putative hydrogenase ex 99.8 9.8E-20 3.4E-24 142.4 10.6 108 29-136 14-123 (137)
36 3hz4_A Thioredoxin; NYSGXRC, P 99.8 2.3E-19 7.8E-24 144.5 12.6 114 29-142 5-118 (140)
37 1x5d_A Protein disulfide-isome 99.8 1.9E-19 6.6E-24 143.6 11.8 110 28-137 5-118 (133)
38 2av4_A Thioredoxin-like protei 99.8 1.7E-19 6E-24 143.0 10.1 108 32-139 23-142 (160)
39 3tco_A Thioredoxin (TRXA-1); d 99.8 2.3E-19 8E-24 137.7 10.5 106 29-135 3-108 (109)
40 2ywm_A Glutaredoxin-like prote 99.8 2.3E-18 8E-23 150.8 18.3 189 169-370 10-220 (229)
41 2o8v_B Thioredoxin 1; disulfid 99.8 2.9E-19 1E-23 141.4 10.8 107 29-135 21-127 (128)
42 2i4a_A Thioredoxin; acidophIle 99.8 3.4E-19 1.1E-23 136.4 10.3 104 30-133 2-105 (107)
43 1t00_A Thioredoxin, TRX; redox 99.8 5.6E-19 1.9E-23 136.4 11.4 106 30-135 5-110 (112)
44 3h79_A Thioredoxin-like protei 99.8 1.9E-18 6.4E-23 136.7 14.5 108 158-265 13-126 (127)
45 3die_A Thioredoxin, TRX; elect 99.8 3.6E-19 1.2E-23 136.0 9.9 102 30-133 3-104 (106)
46 1thx_A Thioredoxin, thioredoxi 99.8 7.8E-19 2.7E-23 136.2 11.5 107 29-135 6-112 (115)
47 1w4v_A Thioredoxin, mitochondr 99.8 4.7E-19 1.6E-23 138.4 10.3 108 28-135 11-118 (119)
48 1dby_A Chloroplast thioredoxin 99.8 5.9E-19 2E-23 135.1 10.4 104 31-134 2-105 (107)
49 3aps_A DNAJ homolog subfamily 99.8 5.4E-19 1.8E-23 138.8 10.1 108 29-136 2-113 (122)
50 2qgv_A Hydrogenase-1 operon pr 99.8 2.2E-19 7.6E-24 140.9 7.3 104 31-135 18-124 (140)
51 1nsw_A Thioredoxin, TRX; therm 99.8 5.1E-19 1.8E-23 134.9 9.1 102 32-134 2-103 (105)
52 2dj1_A Protein disulfide-isome 99.8 7.8E-19 2.7E-23 141.4 10.6 107 27-135 14-123 (140)
53 2voc_A Thioredoxin; electron t 99.8 6.9E-19 2.4E-23 135.9 9.8 103 31-135 2-104 (112)
54 3p2a_A Thioredoxin 2, putative 99.8 2.1E-18 7.1E-23 140.3 13.0 108 28-136 36-143 (148)
55 3qfa_C Thioredoxin; protein-pr 99.8 4.7E-19 1.6E-23 137.7 8.5 104 28-134 10-115 (116)
56 3hxs_A Thioredoxin, TRXP; elec 99.8 9.3E-19 3.2E-23 141.1 10.6 110 26-135 18-138 (141)
57 3uvt_A Thioredoxin domain-cont 99.8 1.5E-18 5.1E-23 133.7 11.0 104 29-134 4-110 (111)
58 1fb6_A Thioredoxin M; electron 99.8 1.1E-18 3.7E-23 133.0 10.1 103 32-134 2-104 (105)
59 3t58_A Sulfhydryl oxidase 1; o 99.8 4.5E-17 1.5E-21 158.0 23.0 205 158-367 10-237 (519)
60 2ppt_A Thioredoxin-2; thiredox 99.8 1.6E-18 5.4E-23 141.9 10.7 106 29-135 46-151 (155)
61 2yzu_A Thioredoxin; redox prot 99.8 1.2E-18 3.9E-23 133.8 9.3 104 31-135 2-105 (109)
62 1x5d_A Protein disulfide-isome 99.8 4E-18 1.4E-22 135.9 12.6 124 157-281 4-131 (133)
63 3apq_A DNAJ homolog subfamily 99.8 2.1E-18 7.2E-23 148.9 11.7 111 25-136 92-202 (210)
64 2e0q_A Thioredoxin; electron t 99.8 2.7E-18 9.1E-23 130.5 10.6 102 32-135 1-102 (104)
65 2l5l_A Thioredoxin; structural 99.8 5.1E-18 1.7E-22 135.9 12.4 107 28-135 7-125 (136)
66 1mek_A Protein disulfide isome 99.8 9E-19 3.1E-23 136.9 7.2 109 26-135 3-116 (120)
67 2i1u_A Thioredoxin, TRX, MPT46 99.8 3.9E-18 1.3E-22 133.6 10.4 107 28-134 10-116 (121)
68 3ga4_A Dolichyl-diphosphooligo 99.8 7.4E-18 2.5E-22 138.7 12.3 107 29-135 17-152 (178)
69 2dj3_A Protein disulfide-isome 99.8 2.6E-18 8.8E-23 137.1 9.2 108 28-135 5-117 (133)
70 4euy_A Uncharacterized protein 99.7 7.6E-19 2.6E-23 134.0 5.6 97 36-134 7-103 (105)
71 2pu9_C TRX-F, thioredoxin F-ty 99.7 1.1E-17 3.8E-22 128.9 12.2 104 29-134 4-109 (111)
72 3f3q_A Thioredoxin-1; His TAG, 99.7 4.4E-18 1.5E-22 130.6 9.9 102 30-134 7-108 (109)
73 1oaz_A Thioredoxin 1; immune s 99.7 6.4E-19 2.2E-23 138.4 5.2 105 30-134 3-121 (123)
74 2djj_A PDI, protein disulfide- 99.7 3.8E-18 1.3E-22 133.7 9.5 105 28-135 5-116 (121)
75 1ep7_A Thioredoxin CH1, H-type 99.7 6.8E-18 2.3E-22 130.2 10.3 104 31-135 3-110 (112)
76 1x5e_A Thioredoxin domain cont 99.7 6.9E-18 2.4E-22 133.2 10.3 104 28-135 5-109 (126)
77 2dml_A Protein disulfide-isome 99.7 3E-17 1E-21 130.3 13.9 112 157-268 14-125 (130)
78 1r26_A Thioredoxin; redox-acti 99.7 1.4E-17 4.8E-22 131.0 11.7 104 29-135 18-122 (125)
79 3dxb_A Thioredoxin N-terminall 99.7 7E-18 2.4E-22 146.8 10.9 110 26-135 8-117 (222)
80 3gix_A Thioredoxin-like protei 99.7 8.6E-18 3E-22 136.5 10.6 104 35-138 9-123 (149)
81 1gh2_A Thioredoxin-like protei 99.7 1.3E-17 4.4E-22 127.5 10.8 102 32-135 3-106 (107)
82 2vlu_A Thioredoxin, thioredoxi 99.7 1.2E-17 4.1E-22 131.0 10.8 104 30-135 13-119 (122)
83 3gnj_A Thioredoxin domain prot 99.7 2.4E-17 8.4E-22 126.8 12.3 109 158-267 2-110 (111)
84 1xwb_A Thioredoxin; dimerizati 99.7 9.7E-18 3.3E-22 127.9 9.8 101 32-133 2-104 (106)
85 3ul3_B Thioredoxin, thioredoxi 99.7 5.2E-18 1.8E-22 134.3 8.3 98 35-133 30-127 (128)
86 3d6i_A Monothiol glutaredoxin- 99.7 1.6E-17 5.6E-22 128.1 10.9 104 32-136 2-109 (112)
87 2wz9_A Glutaredoxin-3; protein 99.7 1.2E-17 4.1E-22 136.5 10.6 126 29-173 11-139 (153)
88 2dj0_A Thioredoxin-related tra 99.7 2.6E-18 8.8E-23 137.8 6.5 107 28-134 5-119 (137)
89 1syr_A Thioredoxin; SGPP, stru 99.7 6.8E-18 2.3E-22 130.3 8.3 104 28-134 7-110 (112)
90 1faa_A Thioredoxin F; electron 99.7 1.3E-17 4.5E-22 131.2 9.6 105 28-134 16-122 (124)
91 1v98_A Thioredoxin; oxidoreduc 99.7 1.5E-17 5.1E-22 133.9 9.9 105 30-135 33-137 (140)
92 3zzx_A Thioredoxin; oxidoreduc 99.7 3.9E-17 1.3E-21 123.9 11.6 101 162-265 2-104 (105)
93 3m9j_A Thioredoxin; oxidoreduc 99.7 2.3E-17 7.9E-22 125.6 10.0 96 36-134 7-104 (105)
94 2oe3_A Thioredoxin-3; electron 99.7 1.3E-17 4.5E-22 129.0 8.4 101 30-132 12-112 (114)
95 3ga4_A Dolichyl-diphosphooligo 99.7 9.9E-17 3.4E-21 131.9 13.9 111 158-268 16-154 (178)
96 3qou_A Protein YBBN; thioredox 99.7 2.1E-17 7.3E-22 149.8 10.7 106 29-135 6-113 (287)
97 2xc2_A Thioredoxinn; oxidoredu 99.7 2.6E-17 9E-22 128.0 9.1 100 32-134 15-116 (117)
98 2trx_A Thioredoxin; electron t 99.7 9.3E-17 3.2E-21 122.9 12.0 106 160-266 2-107 (108)
99 1xfl_A Thioredoxin H1; AT3G510 99.7 5.5E-17 1.9E-21 127.5 10.9 105 28-134 14-122 (124)
100 2vim_A Thioredoxin, TRX; thior 99.7 4.4E-17 1.5E-21 123.7 10.1 100 33-134 2-103 (104)
101 1qgv_A Spliceosomal protein U5 99.7 4.2E-17 1.4E-21 131.3 10.1 102 36-137 10-122 (142)
102 2qsi_A Putative hydrogenase ex 99.7 5.6E-17 1.9E-21 126.8 10.2 107 160-267 15-123 (137)
103 1w4v_A Thioredoxin, mitochondr 99.7 5.8E-17 2E-21 126.4 10.4 111 155-266 8-118 (119)
104 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.1E-16 3.9E-21 123.5 11.4 105 29-135 3-111 (113)
105 1zma_A Bacterocin transport ac 99.7 2.9E-17 1E-21 128.0 7.8 102 30-132 12-117 (118)
106 2voc_A Thioredoxin; electron t 99.7 1.3E-16 4.5E-21 123.0 11.3 103 162-267 3-105 (112)
107 2es7_A Q8ZP25_salty, putative 99.7 3E-17 1E-21 131.6 7.7 103 31-135 18-124 (142)
108 2i4a_A Thioredoxin; acidophIle 99.7 1.8E-16 6E-21 121.1 11.6 105 160-265 2-106 (107)
109 2l6c_A Thioredoxin; oxidoreduc 99.7 5E-17 1.7E-21 124.9 8.6 100 32-134 5-104 (110)
110 2l57_A Uncharacterized protein 99.7 6.3E-17 2.1E-21 127.6 9.3 104 32-135 6-116 (126)
111 3hxs_A Thioredoxin, TRXP; elec 99.7 1.7E-16 6E-21 127.7 12.0 109 157-266 19-138 (141)
112 2av4_A Thioredoxin-like protei 99.7 1.2E-16 4.1E-21 126.8 10.6 106 162-267 23-139 (160)
113 3hz4_A Thioredoxin; NYSGXRC, P 99.7 1.2E-16 4.1E-21 128.5 10.9 109 158-267 4-112 (140)
114 3die_A Thioredoxin, TRX; elect 99.7 1.8E-16 6.1E-21 120.8 11.3 103 160-265 3-105 (106)
115 2j23_A Thioredoxin; immune pro 99.7 4.5E-17 1.5E-21 127.5 8.1 105 28-134 13-119 (121)
116 2yj7_A LPBCA thioredoxin; oxid 99.5 1.9E-18 6.4E-23 131.8 0.0 103 32-134 3-105 (106)
117 1thx_A Thioredoxin, thioredoxi 99.7 2.3E-16 7.9E-21 122.1 11.9 108 159-267 6-113 (115)
118 3evi_A Phosducin-like protein 99.7 9.1E-17 3.1E-21 124.2 9.0 88 31-122 4-93 (118)
119 3emx_A Thioredoxin; structural 99.7 2.8E-17 9.6E-22 131.3 6.4 102 29-135 15-125 (135)
120 2f51_A Thioredoxin; electron t 99.7 1E-16 3.5E-21 124.8 9.4 103 30-134 3-111 (118)
121 3aps_A DNAJ homolog subfamily 99.7 1.7E-16 6E-21 124.3 10.8 107 160-267 3-113 (122)
122 2dj1_A Protein disulfide-isome 99.7 3.8E-16 1.3E-20 125.5 13.0 111 158-271 15-128 (140)
123 2o8v_B Thioredoxin 1; disulfid 99.7 2.1E-16 7E-21 124.9 10.9 106 160-266 22-127 (128)
124 2hls_A Protein disulfide oxido 99.7 1.9E-15 6.5E-20 133.0 18.2 187 169-370 16-226 (243)
125 1t00_A Thioredoxin, TRX; redox 99.7 3.7E-16 1.3E-20 120.4 12.0 106 160-266 5-110 (112)
126 2c0g_A ERP29 homolog, windbeut 99.7 3.1E-16 1.1E-20 136.8 12.9 146 27-208 13-174 (248)
127 2l5l_A Thioredoxin; structural 99.7 6.9E-16 2.4E-20 123.3 13.8 110 159-269 8-128 (136)
128 3qfa_C Thioredoxin; protein-pr 99.7 1.7E-16 5.8E-21 123.2 9.7 107 156-265 8-115 (116)
129 2djj_A PDI, protein disulfide- 99.7 2.8E-16 9.7E-21 122.9 11.0 107 158-267 5-117 (121)
130 2qgv_A Hydrogenase-1 operon pr 99.7 4.7E-17 1.6E-21 127.7 6.4 109 161-271 18-129 (140)
131 1dby_A Chloroplast thioredoxin 99.7 3.5E-16 1.2E-20 119.4 11.1 104 162-266 3-106 (107)
132 3uvt_A Thioredoxin domain-cont 99.7 4.3E-16 1.5E-20 119.8 11.7 104 159-265 4-110 (111)
133 3tco_A Thioredoxin (TRXA-1); d 99.7 5.4E-16 1.9E-20 118.7 12.1 106 159-266 3-108 (109)
134 3d22_A TRXH4, thioredoxin H-ty 99.7 3.2E-16 1.1E-20 125.8 11.2 106 29-136 23-132 (139)
135 2vm1_A Thioredoxin, thioredoxi 99.7 2.7E-16 9.3E-21 122.3 10.2 104 30-135 6-113 (118)
136 3p2a_A Thioredoxin 2, putative 99.7 8.3E-16 2.8E-20 124.8 12.9 109 158-268 36-144 (148)
137 2dj3_A Protein disulfide-isome 99.7 2.8E-16 9.5E-21 125.1 9.8 110 158-267 5-118 (133)
138 1fb6_A Thioredoxin M; electron 99.7 6.1E-16 2.1E-20 117.6 11.3 103 162-265 2-104 (105)
139 1x5e_A Thioredoxin domain cont 99.7 7.6E-16 2.6E-20 121.4 11.9 106 158-268 5-111 (126)
140 2ppt_A Thioredoxin-2; thiredox 99.7 5.6E-16 1.9E-20 126.6 11.2 107 159-267 46-152 (155)
141 2i1u_A Thioredoxin, TRX, MPT46 99.7 3.5E-16 1.2E-20 122.3 9.5 108 158-266 10-117 (121)
142 1nsw_A Thioredoxin, TRX; therm 99.6 6.2E-16 2.1E-20 117.6 10.2 102 162-265 2-103 (105)
143 3apq_A DNAJ homolog subfamily 99.6 1.3E-15 4.6E-20 131.2 13.4 108 158-267 95-202 (210)
144 3dxb_A Thioredoxin N-terminall 99.6 1.2E-15 4E-20 132.7 12.8 121 156-277 8-128 (222)
145 2dbc_A PDCL2, unnamed protein 99.6 9.4E-16 3.2E-20 122.3 10.8 102 28-133 8-118 (135)
146 2yzu_A Thioredoxin; redox prot 99.6 1.1E-15 3.7E-20 117.0 10.8 104 161-266 2-105 (109)
147 2e0q_A Thioredoxin; electron t 99.6 1.5E-15 5.1E-20 115.1 11.3 102 162-266 1-102 (104)
148 3qcp_A QSOX from trypanosoma b 99.6 1.6E-16 5.6E-21 150.0 7.2 107 21-127 14-131 (470)
149 3cxg_A Putative thioredoxin; m 99.6 2.4E-16 8.2E-21 125.4 6.5 104 29-135 19-128 (133)
150 1xwb_A Thioredoxin; dimerizati 99.6 2.7E-15 9.3E-20 114.2 11.3 102 162-265 2-105 (106)
151 1gh2_A Thioredoxin-like protei 99.6 4.2E-15 1.4E-19 113.4 12.0 102 162-266 3-106 (107)
152 1oaz_A Thioredoxin 1; immune s 99.6 4.4E-16 1.5E-20 122.0 6.5 106 160-266 3-122 (123)
153 2pu9_C TRX-F, thioredoxin F-ty 99.6 5.6E-15 1.9E-19 113.5 12.6 106 158-266 3-110 (111)
154 2vlu_A Thioredoxin, thioredoxi 99.6 3.4E-15 1.2E-19 116.8 11.4 107 158-267 11-120 (122)
155 2h8l_A Protein disulfide-isome 99.6 8.9E-14 3E-18 123.2 22.0 204 32-270 8-233 (252)
156 1r26_A Thioredoxin; redox-acti 99.6 5.6E-15 1.9E-19 116.0 12.6 105 159-267 18-123 (125)
157 1mek_A Protein disulfide isome 99.6 1.2E-15 4E-20 119.0 8.5 108 159-267 6-117 (120)
158 1ep7_A Thioredoxin CH1, H-type 99.6 3.4E-15 1.2E-19 114.9 10.8 104 161-266 3-110 (112)
159 1wmj_A Thioredoxin H-type; str 99.6 2.6E-16 8.7E-21 124.8 4.3 109 25-135 9-121 (130)
160 2kuc_A Putative disulphide-iso 99.6 1.1E-15 3.9E-20 121.0 7.8 103 33-135 9-120 (130)
161 2qc7_A ERP31, ERP28, endoplasm 99.6 5.8E-15 2E-19 128.4 12.7 100 30-134 5-117 (240)
162 1v98_A Thioredoxin; oxidoreduc 99.6 3.6E-15 1.2E-19 119.8 10.5 106 160-267 33-138 (140)
163 3f3q_A Thioredoxin-1; His TAG, 99.6 5E-15 1.7E-19 113.4 10.8 103 159-265 6-108 (109)
164 4euy_A Uncharacterized protein 99.6 8.7E-16 3E-20 116.9 6.4 98 166-266 7-104 (105)
165 2oe3_A Thioredoxin-3; electron 99.6 2.5E-15 8.5E-20 116.1 8.7 104 158-264 10-113 (114)
166 2dj0_A Thioredoxin-related tra 99.6 5.5E-16 1.9E-20 124.1 5.1 105 158-263 5-117 (137)
167 3fk8_A Disulphide isomerase; A 99.6 1.7E-15 5.9E-20 120.5 7.8 90 45-134 26-131 (133)
168 1syr_A Thioredoxin; SGPP, stru 99.6 4.9E-15 1.7E-19 114.1 10.1 105 157-265 6-110 (112)
169 3d6i_A Monothiol glutaredoxin- 99.6 7.6E-15 2.6E-19 113.0 11.2 104 162-267 2-109 (112)
170 3m9j_A Thioredoxin; oxidoreduc 99.6 7.8E-15 2.7E-19 111.4 11.1 100 163-265 3-104 (105)
171 2fwh_A Thiol:disulfide interch 99.6 3.7E-15 1.3E-19 118.7 9.4 98 36-134 18-126 (134)
172 1fo5_A Thioredoxin; disulfide 99.6 1.9E-15 6.4E-20 110.1 7.0 82 49-134 3-84 (85)
173 2djk_A PDI, protein disulfide- 99.6 2.7E-15 9.1E-20 119.3 8.4 112 32-154 8-125 (133)
174 2l57_A Uncharacterized protein 99.6 5.3E-15 1.8E-19 116.5 9.9 97 175-271 23-121 (126)
175 3qou_A Protein YBBN; thioredox 99.6 6.4E-15 2.2E-19 133.4 11.8 108 158-266 5-113 (287)
176 2vim_A Thioredoxin, TRX; thior 99.6 1.2E-14 4E-19 110.2 11.1 100 163-265 2-103 (104)
177 1xfl_A Thioredoxin H1; AT3G510 99.6 1.7E-14 5.8E-19 113.2 12.2 106 158-266 14-123 (124)
178 3gix_A Thioredoxin-like protei 99.6 9.4E-15 3.2E-19 118.4 10.9 102 165-267 9-121 (149)
179 2xc2_A Thioredoxinn; oxidoredu 99.6 8.8E-15 3E-19 113.6 10.2 100 162-265 15-116 (117)
180 1nho_A Probable thioredoxin; b 99.6 2.3E-15 7.7E-20 109.7 6.2 82 50-135 3-84 (85)
181 1wou_A Thioredoxin -related pr 99.6 4E-15 1.4E-19 116.6 8.0 100 32-132 7-121 (123)
182 3ul3_B Thioredoxin, thioredoxi 99.6 2.5E-15 8.4E-20 118.8 6.6 96 168-264 32-127 (128)
183 1faa_A Thioredoxin F; electron 99.6 2.5E-14 8.4E-19 112.3 11.7 105 158-265 16-122 (124)
184 3evi_A Phosducin-like protein 99.6 1.2E-14 4E-19 112.3 9.6 101 160-265 3-112 (118)
185 3f9u_A Putative exported cytoc 99.6 9.5E-15 3.3E-19 121.7 9.4 106 33-138 29-168 (172)
186 2trc_P Phosducin, MEKA, PP33; 99.6 3.1E-15 1.1E-19 128.8 6.4 103 29-133 98-210 (217)
187 1qgv_A Spliceosomal protein U5 99.5 2E-14 7E-19 115.4 10.0 103 166-268 10-122 (142)
188 2es7_A Q8ZP25_salty, putative 99.5 9.1E-15 3.1E-19 117.1 7.8 104 161-267 18-125 (142)
189 2c0g_A ERP29 homolog, windbeut 99.5 5.1E-14 1.8E-18 122.8 13.1 104 158-267 14-132 (248)
190 2wz9_A Glutaredoxin-3; protein 99.5 4.1E-14 1.4E-18 115.4 11.8 109 158-269 10-120 (153)
191 1a0r_P Phosducin, MEKA, PP33; 99.5 7.6E-15 2.6E-19 128.0 7.7 92 29-122 111-205 (245)
192 1ti3_A Thioredoxin H, PTTRXH1; 99.5 4.2E-14 1.4E-18 108.9 10.7 104 160-266 4-111 (113)
193 3ec3_A Protein disulfide-isome 99.5 1.3E-12 4.6E-17 115.4 21.7 203 32-269 8-230 (250)
194 2f51_A Thioredoxin; electron t 99.5 3.4E-14 1.2E-18 110.4 9.9 106 160-267 3-113 (118)
195 2vm1_A Thioredoxin, thioredoxi 99.5 5.4E-14 1.9E-18 109.2 10.9 106 159-267 5-114 (118)
196 2yj7_A LPBCA thioredoxin; oxid 99.3 7.2E-16 2.4E-20 117.3 0.0 103 162-265 3-105 (106)
197 2j23_A Thioredoxin; immune pro 99.5 2.8E-14 9.6E-19 111.4 9.0 106 158-266 13-120 (121)
198 3emx_A Thioredoxin; structural 99.5 8.8E-15 3E-19 116.7 5.9 105 159-269 15-128 (135)
199 3d22_A TRXH4, thioredoxin H-ty 99.5 9.9E-14 3.4E-18 111.1 12.1 108 158-268 22-133 (139)
200 3iv4_A Putative oxidoreductase 99.5 1.6E-14 5.3E-19 108.2 6.7 96 32-130 8-110 (112)
201 2djk_A PDI, protein disulfide- 99.5 1.3E-13 4.6E-18 109.4 12.4 109 159-269 5-117 (133)
202 2lst_A Thioredoxin; structural 99.3 1E-15 3.5E-20 121.3 0.0 97 38-135 10-115 (130)
203 2l6c_A Thioredoxin; oxidoreduc 99.5 2.8E-14 9.5E-19 109.4 8.1 101 162-266 5-105 (110)
204 3dml_A Putative uncharacterize 99.5 1.2E-14 4.2E-19 110.4 5.3 92 46-137 16-111 (116)
205 2qc7_A ERP31, ERP28, endoplasm 99.5 1.9E-13 6.4E-18 118.9 13.3 103 159-266 4-118 (240)
206 1zma_A Bacterocin transport ac 99.5 2.7E-14 9.2E-19 111.0 6.4 103 159-263 11-117 (118)
207 3cxg_A Putative thioredoxin; m 99.5 4.4E-14 1.5E-18 112.2 7.7 108 157-267 17-129 (133)
208 2b5x_A YKUV protein, TRXY; thi 99.5 2.4E-13 8.3E-18 109.9 12.2 102 33-135 15-144 (148)
209 2dbc_A PDCL2, unnamed protein 99.5 3E-13 1E-17 107.6 12.2 104 158-266 8-120 (135)
210 1sen_A Thioredoxin-like protei 99.5 1.6E-14 5.6E-19 119.1 4.5 100 38-138 37-150 (164)
211 2kuc_A Putative disulphide-iso 99.5 1.2E-13 4E-18 109.3 9.2 107 162-268 8-122 (130)
212 2ju5_A Thioredoxin disulfide i 99.5 6.4E-14 2.2E-18 114.3 7.5 89 46-135 45-151 (154)
213 1lu4_A Soluble secreted antige 99.5 1.1E-13 3.9E-18 110.1 8.7 101 32-135 9-135 (136)
214 3or5_A Thiol:disulfide interch 99.5 2.5E-13 8.4E-18 112.1 11.0 110 26-136 13-151 (165)
215 3kp8_A Vkorc1/thioredoxin doma 99.5 9E-15 3.1E-19 110.9 2.0 76 46-132 10-91 (106)
216 1zzo_A RV1677; thioredoxin fol 99.4 2.7E-13 9.2E-18 107.8 9.3 101 32-135 10-134 (136)
217 1fo5_A Thioredoxin; disulfide 99.4 2.2E-13 7.5E-18 99.0 7.7 82 179-265 3-84 (85)
218 2trc_P Phosducin, MEKA, PP33; 99.4 2.8E-13 9.6E-18 116.5 9.5 104 159-265 98-211 (217)
219 2fwh_A Thiol:disulfide interch 99.4 8E-13 2.7E-17 105.1 10.9 106 159-265 10-126 (134)
220 3qcp_A QSOX from trypanosoma b 99.4 8.6E-14 3E-18 131.5 6.0 99 158-256 21-129 (470)
221 3erw_A Sporulation thiol-disul 99.4 2.2E-13 7.6E-18 109.7 7.6 97 33-131 21-144 (145)
222 3fk8_A Disulphide isomerase; A 99.4 4E-13 1.4E-17 106.7 9.0 90 176-265 27-131 (133)
223 1wmj_A Thioredoxin H-type; str 99.4 7.6E-14 2.6E-18 110.4 4.7 108 158-268 12-123 (130)
224 1nho_A Probable thioredoxin; b 99.4 2.9E-13 9.9E-18 98.3 7.4 82 180-266 3-84 (85)
225 1wou_A Thioredoxin -related pr 99.4 5.9E-13 2E-17 104.1 8.5 101 161-263 6-121 (123)
226 3ira_A Conserved protein; meth 99.4 6.1E-13 2.1E-17 109.4 8.8 104 32-136 24-144 (173)
227 1a0r_P Phosducin, MEKA, PP33; 99.4 9.9E-13 3.4E-17 114.6 10.4 105 159-266 111-225 (245)
228 1ilo_A Conserved hypothetical 99.4 4.9E-13 1.7E-17 95.2 6.9 74 51-131 2-76 (77)
229 1hyu_A AHPF, alkyl hydroperoxi 99.4 1.5E-11 5.2E-16 120.4 19.9 181 46-264 16-197 (521)
230 3hcz_A Possible thiol-disulfid 99.4 7.3E-13 2.5E-17 107.0 8.7 105 29-134 13-144 (148)
231 2f9s_A Thiol-disulfide oxidore 99.4 8.2E-13 2.8E-17 107.3 8.5 101 34-135 13-137 (151)
232 2lja_A Putative thiol-disulfid 99.4 1.7E-12 5.7E-17 105.5 10.2 104 31-135 14-142 (152)
233 3raz_A Thioredoxin-related pro 99.4 1.7E-12 5.9E-17 105.4 10.1 90 46-135 22-139 (151)
234 1z6n_A Hypothetical protein PA 99.4 1E-12 3.5E-17 108.0 8.4 96 34-133 40-140 (167)
235 2l5o_A Putative thioredoxin; s 99.4 3.3E-12 1.1E-16 103.9 10.7 104 32-136 13-141 (153)
236 4evm_A Thioredoxin family prot 99.4 2E-12 6.9E-17 102.8 9.1 99 34-133 9-136 (138)
237 3iv4_A Putative oxidoreductase 99.4 1.1E-12 3.9E-17 98.1 7.0 98 161-261 7-110 (112)
238 3ph9_A Anterior gradient prote 99.4 2.1E-12 7.1E-17 104.0 9.0 88 43-132 39-138 (151)
239 3lor_A Thiol-disulfide isomera 99.4 4.2E-12 1.5E-16 104.1 11.1 105 30-135 12-154 (160)
240 3eyt_A Uncharacterized protein 99.3 5.1E-12 1.8E-16 103.4 10.7 105 30-135 9-151 (158)
241 2b1k_A Thiol:disulfide interch 99.3 2.5E-12 8.5E-17 106.5 8.6 108 29-139 30-163 (168)
242 2h30_A Thioredoxin, peptide me 99.3 5.2E-13 1.8E-17 110.0 4.1 104 31-135 22-155 (164)
243 3f9u_A Putative exported cytoc 99.3 4.3E-12 1.5E-16 105.5 9.3 105 163-267 29-166 (172)
244 2lrn_A Thiol:disulfide interch 99.3 6.1E-12 2.1E-16 102.2 10.0 99 33-135 15-140 (152)
245 3fkf_A Thiol-disulfide oxidore 99.3 4E-12 1.4E-16 102.6 8.6 103 29-135 13-145 (148)
246 1kng_A Thiol:disulfide interch 99.3 4.4E-12 1.5E-16 103.5 8.7 97 38-137 33-153 (156)
247 2fgx_A Putative thioredoxin; N 99.3 2.5E-12 8.4E-17 96.4 6.4 77 50-131 30-106 (107)
248 3gl3_A Putative thiol:disulfid 99.3 1.3E-11 4.5E-16 100.2 10.6 99 36-135 17-141 (152)
249 3lwa_A Secreted thiol-disulfid 99.3 1.2E-11 4.1E-16 103.9 10.5 104 32-136 42-181 (183)
250 3ia1_A THIO-disulfide isomeras 99.3 5.3E-12 1.8E-16 102.8 7.5 103 29-135 13-143 (154)
251 2lst_A Thioredoxin; structural 98.9 3.5E-13 1.2E-17 106.5 0.0 94 175-268 16-117 (130)
252 1nm3_A Protein HI0572; hybrid, 99.3 6.1E-11 2.1E-15 104.2 14.0 148 47-238 32-225 (241)
253 3ha9_A Uncharacterized thiored 99.3 1.6E-11 5.5E-16 101.2 9.7 102 31-135 21-163 (165)
254 1ttz_A Conserved hypothetical 99.3 2.3E-12 7.9E-17 93.3 3.9 73 52-134 3-75 (87)
255 2lrt_A Uncharacterized protein 99.3 1.8E-11 6E-16 99.5 9.4 97 30-127 18-139 (152)
256 3kcm_A Thioredoxin family prot 99.2 2.4E-11 8.3E-16 98.8 9.6 103 32-135 13-142 (154)
257 3hdc_A Thioredoxin family prot 99.2 2.2E-11 7.5E-16 99.6 9.0 101 30-131 24-147 (158)
258 1i5g_A Tryparedoxin II; electr 99.2 3.9E-11 1.3E-15 96.5 10.2 83 31-114 12-122 (144)
259 2ju5_A Thioredoxin disulfide i 99.2 2.5E-11 8.7E-16 98.8 9.1 91 176-267 45-152 (154)
260 3fw2_A Thiol-disulfide oxidore 99.2 6.1E-11 2.1E-15 96.0 11.1 104 29-136 13-148 (150)
261 3ewl_A Uncharacterized conserv 99.2 1.8E-11 6.2E-16 98.1 7.8 100 32-134 12-139 (142)
262 2b5x_A YKUV protein, TRXY; thi 99.2 9.6E-11 3.3E-15 94.4 12.0 104 163-267 15-145 (148)
263 3kh7_A Thiol:disulfide interch 99.2 3.6E-11 1.2E-15 100.2 9.5 104 31-138 40-169 (176)
264 3dml_A Putative uncharacterize 99.2 1.2E-11 4E-16 94.0 5.8 87 177-267 17-110 (116)
265 1lu4_A Soluble secreted antige 99.2 6.6E-11 2.3E-15 93.9 10.3 88 177-266 23-135 (136)
266 1o8x_A Tryparedoxin, TRYX, TXN 99.2 6.2E-11 2.1E-15 95.5 9.6 82 31-114 13-122 (146)
267 2ywi_A Hypothetical conserved 99.2 7.1E-11 2.4E-15 100.3 10.1 101 34-135 32-173 (196)
268 1o73_A Tryparedoxin; electron 99.2 8.7E-11 3E-15 94.3 10.1 69 46-114 26-122 (144)
269 2cvb_A Probable thiol-disulfid 99.2 8.7E-11 3E-15 99.0 10.4 103 32-135 18-158 (188)
270 3kp8_A Vkorc1/thioredoxin doma 99.2 2.2E-11 7.4E-16 92.1 5.9 75 178-264 12-92 (106)
271 1ilo_A Conserved hypothetical 99.2 5.3E-11 1.8E-15 84.4 7.6 74 181-262 2-76 (77)
272 1sen_A Thioredoxin-like protei 99.2 1.8E-11 6.2E-16 100.7 5.9 94 175-268 43-149 (164)
273 3s9f_A Tryparedoxin; thioredox 99.2 8.5E-11 2.9E-15 96.8 9.7 78 32-111 34-137 (165)
274 3eur_A Uncharacterized protein 99.2 4.1E-11 1.4E-15 96.0 7.4 99 30-132 14-141 (142)
275 1jfu_A Thiol:disulfide interch 99.2 1.4E-10 4.8E-15 97.5 10.9 103 32-135 45-179 (186)
276 1zzo_A RV1677; thioredoxin fol 99.2 1.5E-10 5.1E-15 91.7 10.5 88 177-266 24-134 (136)
277 2hyx_A Protein DIPZ; thioredox 99.2 1E-10 3.5E-15 107.7 10.4 92 46-137 80-200 (352)
278 2lja_A Putative thiol-disulfid 99.2 2.4E-10 8.3E-15 92.6 11.2 94 177-270 29-146 (152)
279 3erw_A Sporulation thiol-disul 99.2 1.5E-10 5E-15 92.9 9.7 86 177-262 33-144 (145)
280 2dlx_A UBX domain-containing p 99.1 1.4E-10 4.7E-15 93.4 9.1 91 45-136 39-136 (153)
281 2fgx_A Putative thioredoxin; N 99.1 8.1E-11 2.8E-15 88.2 7.0 77 180-262 30-106 (107)
282 3raz_A Thioredoxin-related pro 99.1 3.4E-10 1.2E-14 91.7 11.3 91 177-267 23-140 (151)
283 3or5_A Thiol:disulfide interch 99.1 3.3E-10 1.1E-14 93.1 10.9 92 177-268 33-152 (165)
284 2f9s_A Thiol-disulfide oxidore 99.1 2.4E-10 8.2E-15 92.5 9.7 92 177-268 25-139 (151)
285 3ph9_A Anterior gradient prote 99.1 3E-10 1E-14 91.3 9.2 92 174-266 40-144 (151)
286 1z6n_A Hypothetical protein PA 99.1 9.5E-11 3.2E-15 96.2 6.2 95 165-263 41-139 (167)
287 3ia1_A THIO-disulfide isomeras 99.1 3E-10 1E-14 92.2 9.1 89 179-269 31-146 (154)
288 3gl3_A Putative thiol:disulfid 99.1 5.6E-10 1.9E-14 90.4 10.4 95 177-271 27-146 (152)
289 2l5o_A Putative thioredoxin; s 99.1 9.4E-10 3.2E-14 89.2 11.6 93 177-269 27-143 (153)
290 3kp9_A Vkorc1/thioredoxin doma 99.1 6.1E-11 2.1E-15 105.4 4.6 71 51-132 200-276 (291)
291 2rli_A SCO2 protein homolog, m 99.1 5.3E-10 1.8E-14 92.5 9.9 105 32-137 11-165 (171)
292 3u5r_E Uncharacterized protein 99.1 7E-10 2.4E-14 95.8 10.7 106 28-135 39-186 (218)
293 3hcz_A Possible thiol-disulfid 99.1 3.4E-10 1.2E-14 91.1 8.2 90 177-266 30-145 (148)
294 1ttz_A Conserved hypothetical 99.1 1.6E-10 5.6E-15 83.5 5.4 74 182-266 3-76 (87)
295 4evm_A Thioredoxin family prot 99.1 7.8E-10 2.7E-14 87.6 10.0 88 177-264 21-136 (138)
296 3lor_A Thiol-disulfide isomera 99.1 7.4E-10 2.5E-14 90.5 10.1 91 177-267 29-155 (160)
297 3drn_A Peroxiredoxin, bacterio 99.1 1.2E-09 4E-14 89.6 11.0 108 30-138 11-147 (161)
298 4fo5_A Thioredoxin-like protei 99.1 1.6E-10 5.6E-15 92.6 5.7 94 34-131 19-140 (143)
299 2ggt_A SCO1 protein homolog, m 99.0 5.5E-10 1.9E-14 91.7 8.5 102 33-135 9-160 (164)
300 2h30_A Thioredoxin, peptide me 99.0 2.1E-10 7.2E-15 94.2 5.8 105 161-266 22-155 (164)
301 3bj5_A Protein disulfide-isome 99.0 1.4E-09 4.9E-14 87.2 10.0 105 271-376 12-133 (147)
302 2lrn_A Thiol:disulfide interch 99.0 2.3E-09 7.7E-14 86.9 11.1 88 177-267 28-141 (152)
303 3eyt_A Uncharacterized protein 99.0 1.5E-09 5.2E-14 88.5 10.1 91 177-267 27-152 (158)
304 2lus_A Thioredoxion; CR-Trp16, 98.6 3.6E-11 1.2E-15 96.4 0.0 68 47-114 24-121 (143)
305 2ls5_A Uncharacterized protein 98.6 3.8E-11 1.3E-15 98.3 0.0 101 32-134 18-146 (159)
306 2e7p_A Glutaredoxin; thioredox 99.0 1.6E-10 5.5E-15 89.1 3.3 83 43-133 15-105 (116)
307 3fkf_A Thiol-disulfide oxidore 99.0 1.6E-09 5.5E-14 87.1 9.2 87 177-266 32-145 (148)
308 3ira_A Conserved protein; meth 99.0 1.2E-09 4.3E-14 89.6 8.5 78 166-244 28-116 (173)
309 3lwa_A Secreted thiol-disulfid 99.0 2.1E-09 7.2E-14 90.0 10.1 90 177-266 58-180 (183)
310 3cmi_A Peroxiredoxin HYR1; thi 99.0 1.3E-09 4.5E-14 90.2 8.5 101 33-135 18-167 (171)
311 2v1m_A Glutathione peroxidase; 99.0 2.8E-09 9.5E-14 87.9 9.9 102 33-135 17-166 (169)
312 2b1k_A Thiol:disulfide interch 99.0 1E-09 3.6E-14 90.5 7.0 88 176-266 49-159 (168)
313 3ha9_A Uncharacterized thiored 98.9 4.3E-09 1.5E-13 86.4 10.5 87 177-266 36-163 (165)
314 2vup_A Glutathione peroxidase- 98.9 2.5E-09 8.4E-14 90.2 9.0 103 32-135 33-184 (190)
315 2k6v_A Putative cytochrome C o 98.9 5.8E-10 2E-14 92.3 5.0 87 47-133 34-170 (172)
316 2k8s_A Thioredoxin; dimer, str 98.9 5.8E-10 2E-14 79.6 4.2 61 51-113 3-64 (80)
317 3hdc_A Thioredoxin family prot 98.9 4.1E-09 1.4E-13 85.9 9.6 89 177-265 40-150 (158)
318 2p5q_A Glutathione peroxidase 98.9 2.1E-09 7.2E-14 88.7 7.9 102 33-135 18-167 (170)
319 3kcm_A Thioredoxin family prot 98.9 3.5E-09 1.2E-13 85.8 9.0 91 177-267 27-143 (154)
320 1kng_A Thiol:disulfide interch 98.9 2.2E-09 7.6E-14 87.2 7.5 89 177-267 41-152 (156)
321 3ewl_A Uncharacterized conserv 98.9 3.8E-09 1.3E-13 84.3 8.8 86 177-265 26-139 (142)
322 3kij_A Probable glutathione pe 98.9 4.5E-09 1.6E-13 87.7 9.6 108 32-140 23-174 (180)
323 2lrt_A Uncharacterized protein 98.9 4.5E-09 1.5E-13 85.1 9.3 84 178-261 35-142 (152)
324 2l4c_A Endoplasmic reticulum r 98.9 1.1E-08 3.7E-13 79.2 10.8 97 160-265 21-122 (124)
325 1we0_A Alkyl hydroperoxide red 98.9 3E-09 1E-13 89.4 7.7 89 47-135 30-156 (187)
326 2dlx_A UBX domain-containing p 98.9 1.2E-08 4.2E-13 82.0 10.6 102 168-270 29-139 (153)
327 1wjk_A C330018D20RIK protein; 98.9 1.4E-09 4.8E-14 81.1 4.7 78 47-133 14-93 (100)
328 3dwv_A Glutathione peroxidase- 98.9 3.3E-09 1.1E-13 89.2 7.5 105 30-135 29-182 (187)
329 1hyu_A AHPF, alkyl hydroperoxi 98.9 4.3E-09 1.5E-13 103.0 9.3 94 34-133 103-197 (521)
330 1xvw_A Hypothetical protein RV 98.9 4.2E-09 1.4E-13 86.0 7.9 100 32-132 20-152 (160)
331 3eur_A Uncharacterized protein 98.9 6.6E-09 2.3E-13 83.0 8.8 83 178-263 31-141 (142)
332 1ego_A Glutaredoxin; electron 98.9 4.4E-09 1.5E-13 75.9 7.0 75 51-134 2-82 (85)
333 3s9f_A Tryparedoxin; thioredox 98.9 1.2E-08 4.1E-13 83.8 10.1 66 177-242 47-138 (165)
334 2ywi_A Hypothetical conserved 98.9 1.1E-08 3.8E-13 86.6 10.1 90 179-268 47-175 (196)
335 2p31_A CL683, glutathione pero 98.8 2E-09 6.9E-14 90.0 5.1 102 32-134 34-179 (181)
336 1i5g_A Tryparedoxin II; electr 98.8 1.3E-08 4.5E-13 81.4 9.4 67 177-243 27-120 (144)
337 1o8x_A Tryparedoxin, TRYX, TXN 98.8 1.6E-08 5.4E-13 81.2 9.9 67 177-243 27-120 (146)
338 2cvb_A Probable thiol-disulfid 98.8 1.7E-08 5.8E-13 84.8 10.3 90 177-268 32-160 (188)
339 2hyx_A Protein DIPZ; thioredox 98.8 1.8E-08 6.2E-13 92.7 10.8 93 177-269 81-201 (352)
340 3fw2_A Thiol-disulfide oxidore 98.8 3.1E-08 1.1E-12 79.8 11.1 87 177-266 32-147 (150)
341 2bmx_A Alkyl hydroperoxidase C 98.8 7.5E-09 2.5E-13 87.6 7.6 89 47-135 44-169 (195)
342 3kh7_A Thiol:disulfide interch 98.8 1E-08 3.5E-13 85.2 8.1 88 177-267 57-167 (176)
343 2gs3_A PHGPX, GPX-4, phospholi 98.8 1.1E-08 3.8E-13 85.7 8.2 102 32-134 34-184 (185)
344 1o73_A Tryparedoxin; electron 98.8 2.1E-08 7.1E-13 80.2 9.3 67 177-243 27-120 (144)
345 1zof_A Alkyl hydroperoxide-red 98.8 5E-09 1.7E-13 88.9 5.7 88 47-134 32-159 (198)
346 1jfu_A Thiol:disulfide interch 98.8 3.7E-08 1.3E-12 82.5 10.9 91 177-267 59-180 (186)
347 2f8a_A Glutathione peroxidase 98.8 1.6E-08 5.3E-13 86.4 8.5 89 47-135 46-206 (208)
348 2obi_A PHGPX, GPX-4, phospholi 98.8 6E-09 2E-13 87.2 5.7 100 32-132 32-180 (183)
349 3gyk_A 27KDA outer membrane pr 98.8 3.5E-08 1.2E-12 81.8 9.8 83 47-135 21-172 (175)
350 1eej_A Thiol:disulfide interch 98.7 2.2E-08 7.5E-13 86.1 8.4 82 47-135 85-210 (216)
351 3kp9_A Vkorc1/thioredoxin doma 98.7 6.9E-09 2.4E-13 92.2 4.7 71 182-264 201-277 (291)
352 3u5r_E Uncharacterized protein 98.7 5E-08 1.7E-12 84.0 9.8 88 180-269 61-189 (218)
353 2ggt_A SCO1 protein homolog, m 98.7 7.4E-08 2.5E-12 78.8 9.9 91 177-267 22-161 (164)
354 2b7k_A SCO1 protein; metalloch 98.7 7.5E-08 2.6E-12 81.7 10.2 105 31-136 25-179 (200)
355 2rli_A SCO2 protein homolog, m 98.7 1.2E-07 4.3E-12 78.0 11.0 91 178-268 26-165 (171)
356 2jsy_A Probable thiol peroxida 98.7 9.3E-08 3.2E-12 78.6 10.0 101 32-134 29-165 (167)
357 4fo5_A Thioredoxin-like protei 98.7 1.1E-07 3.8E-12 75.9 10.1 83 177-262 31-140 (143)
358 1un2_A DSBA, thiol-disulfide i 98.7 5.6E-08 1.9E-12 82.0 8.4 117 91-221 39-159 (197)
359 1wjk_A C330018D20RIK protein; 98.7 2.5E-08 8.5E-13 74.3 5.3 79 178-266 15-95 (100)
360 1uul_A Tryparedoxin peroxidase 98.7 7.2E-08 2.4E-12 82.0 8.8 88 47-134 35-163 (202)
361 2k8s_A Thioredoxin; dimer, str 98.6 1.1E-08 3.7E-13 72.9 2.9 58 181-238 3-61 (80)
362 1qmv_A Human thioredoxin perox 98.6 9.8E-08 3.4E-12 80.8 9.5 88 47-134 33-161 (197)
363 1t3b_A Thiol:disulfide interch 98.6 6.5E-08 2.2E-12 82.7 8.4 80 47-133 85-208 (211)
364 2h01_A 2-Cys peroxiredoxin; th 98.6 1.3E-07 4.3E-12 79.7 9.0 87 47-133 30-156 (192)
365 3h93_A Thiol:disulfide interch 98.6 1.5E-07 5.1E-12 79.3 9.0 90 47-138 24-186 (192)
366 3drn_A Peroxiredoxin, bacterio 98.6 2E-07 6.9E-12 76.0 9.3 76 178-253 28-131 (161)
367 3ztl_A Thioredoxin peroxidase; 98.6 1.8E-07 6.1E-12 80.8 9.1 79 47-125 68-183 (222)
368 2i81_A 2-Cys peroxiredoxin; st 98.6 1.6E-07 5.5E-12 80.4 8.8 88 47-134 51-178 (213)
369 1zye_A Thioredoxin-dependent p 98.6 8.6E-08 3E-12 82.6 7.1 88 47-134 55-183 (220)
370 1xvq_A Thiol peroxidase; thior 98.6 2.3E-07 7.7E-12 76.9 8.8 86 47-134 43-163 (175)
371 3hd5_A Thiol:disulfide interch 98.5 4.4E-07 1.5E-11 76.6 10.7 44 46-89 23-66 (195)
372 2k6v_A Putative cytochrome C o 98.5 9.1E-08 3.1E-12 78.9 6.3 88 177-265 34-171 (172)
373 2vup_A Glutathione peroxidase- 98.5 3.4E-07 1.2E-11 76.9 9.7 91 177-267 47-185 (190)
374 3gkn_A Bacterioferritin comigr 98.5 3.9E-07 1.3E-11 74.4 9.6 75 47-121 34-144 (163)
375 1xzo_A BSSCO, hypothetical pro 98.5 1E-07 3.5E-12 78.7 5.9 102 33-135 19-171 (174)
376 3cmi_A Peroxiredoxin HYR1; thi 98.5 2.6E-07 8.9E-12 76.2 8.2 89 177-266 31-167 (171)
377 2ls5_A Uncharacterized protein 97.9 1.3E-08 4.3E-13 83.1 0.0 87 177-264 32-145 (159)
378 2lus_A Thioredoxion; CR-Trp16, 97.9 1.3E-08 4.5E-13 81.2 0.0 67 178-244 25-120 (143)
379 2v1m_A Glutathione peroxidase; 98.5 6E-07 2.1E-11 73.6 9.6 91 177-267 30-167 (169)
380 2p5q_A Glutathione peroxidase 98.5 4.7E-07 1.6E-11 74.4 8.8 90 177-266 31-167 (170)
381 2bmx_A Alkyl hydroperoxidase C 98.5 3.4E-07 1.2E-11 77.2 8.1 89 178-266 45-169 (195)
382 1v58_A Thiol:disulfide interch 98.5 2.7E-07 9.3E-12 80.6 7.5 86 47-135 96-232 (241)
383 1we0_A Alkyl hydroperoxide red 98.5 3.3E-07 1.1E-11 76.8 7.6 91 177-267 30-157 (187)
384 2i3y_A Epididymal secretory gl 98.5 5.5E-07 1.9E-11 77.0 9.1 56 32-89 40-97 (215)
385 2e7p_A Glutaredoxin; thioredox 98.5 4.3E-08 1.5E-12 75.2 1.9 79 179-265 20-106 (116)
386 1ego_A Glutaredoxin; electron 98.4 2E-07 7E-12 67.0 5.2 76 181-266 2-83 (85)
387 1zof_A Alkyl hydroperoxide-red 98.4 2.4E-07 8.3E-12 78.4 6.4 90 177-266 32-160 (198)
388 2r37_A Glutathione peroxidase 98.4 8.7E-07 3E-11 75.3 9.2 91 47-138 37-195 (207)
389 2a4v_A Peroxiredoxin DOT5; yea 98.4 4.4E-07 1.5E-11 73.8 7.1 76 48-124 35-139 (159)
390 2p31_A CL683, glutathione pero 98.4 6.3E-07 2.2E-11 74.6 7.9 89 177-265 48-179 (181)
391 1xvw_A Hypothetical protein RV 98.4 9.1E-07 3.1E-11 71.9 8.5 85 179-263 37-156 (160)
392 2l4c_A Endoplasmic reticulum r 98.4 2.3E-06 7.9E-11 66.0 10.2 97 29-134 20-122 (124)
393 1r7h_A NRDH-redoxin; thioredox 98.4 5.2E-07 1.8E-11 63.0 6.0 68 52-131 3-73 (75)
394 3dwv_A Glutathione peroxidase- 98.4 1.1E-06 3.9E-11 73.5 9.1 91 177-267 45-183 (187)
395 2f8a_A Glutathione peroxidase 98.3 2.2E-06 7.4E-11 73.0 9.9 43 177-219 46-89 (208)
396 3ixr_A Bacterioferritin comigr 98.3 2.9E-06 9.9E-11 70.4 10.4 88 32-120 36-159 (179)
397 1h75_A Glutaredoxin-like prote 98.3 4.9E-07 1.7E-11 64.2 4.3 68 52-131 3-73 (81)
398 3bj5_A Protein disulfide-isome 98.3 9.7E-06 3.3E-10 64.7 12.1 111 158-269 12-129 (147)
399 3hz8_A Thiol:disulfide interch 98.3 5E-06 1.7E-10 69.8 10.9 42 47-88 23-64 (193)
400 3kij_A Probable glutathione pe 98.3 3.4E-06 1.1E-10 70.1 9.6 90 177-266 37-169 (180)
401 2obi_A PHGPX, GPX-4, phospholi 98.3 1.4E-06 4.7E-11 72.7 7.1 87 177-263 46-180 (183)
402 1qmv_A Human thioredoxin perox 98.3 2.7E-06 9.3E-11 71.8 8.7 89 177-265 33-161 (197)
403 2gs3_A PHGPX, GPX-4, phospholi 98.3 2.5E-06 8.5E-11 71.2 8.3 88 177-264 48-183 (185)
404 2c0d_A Thioredoxin peroxidase 98.3 1.8E-06 6.1E-11 74.2 7.5 88 47-134 55-182 (221)
405 2hze_A Glutaredoxin-1; thiored 98.3 2E-07 6.9E-12 71.2 1.3 60 50-114 19-85 (114)
406 3me7_A Putative uncharacterize 98.2 3.1E-06 1.1E-10 69.6 8.3 103 31-134 12-160 (170)
407 1n8j_A AHPC, alkyl hydroperoxi 98.2 3.6E-06 1.2E-10 70.4 8.7 88 47-134 29-154 (186)
408 4g2e_A Peroxiredoxin; redox pr 98.2 6.7E-07 2.3E-11 72.6 4.0 57 32-89 15-73 (157)
409 4dvc_A Thiol:disulfide interch 98.2 4.4E-06 1.5E-10 69.5 8.9 86 47-134 20-180 (184)
410 1uul_A Tryparedoxin peroxidase 98.2 2.8E-06 9.4E-11 72.1 7.7 89 178-266 36-164 (202)
411 1eej_A Thiol:disulfide interch 98.2 2.9E-06 9.8E-11 72.8 7.3 82 177-266 85-210 (216)
412 1kte_A Thioltransferase; redox 98.2 1.6E-06 5.3E-11 65.1 4.9 59 51-114 13-78 (105)
413 3gyk_A 27KDA outer membrane pr 98.2 5.5E-06 1.9E-10 68.4 8.7 83 177-266 21-172 (175)
414 2h01_A 2-Cys peroxiredoxin; th 98.2 4E-06 1.4E-10 70.4 8.0 89 177-265 30-157 (192)
415 2i81_A 2-Cys peroxiredoxin; st 98.2 5.2E-06 1.8E-10 71.0 8.6 89 177-265 51-178 (213)
416 2b7k_A SCO1 protein; metalloch 98.2 6E-06 2.1E-10 69.8 8.8 91 177-267 40-179 (200)
417 1zye_A Thioredoxin-dependent p 98.2 4.7E-06 1.6E-10 71.6 8.1 89 178-266 56-184 (220)
418 2yzh_A Probable thiol peroxida 98.2 2.8E-06 9.5E-11 69.9 6.4 42 47-89 46-88 (171)
419 1t3b_A Thiol:disulfide interch 98.2 5.8E-06 2E-10 70.5 8.4 80 177-264 85-208 (211)
420 2pn8_A Peroxiredoxin-4; thiore 98.1 6.6E-06 2.2E-10 70.2 8.4 88 47-134 47-175 (211)
421 2jsy_A Probable thiol peroxida 98.1 1.2E-05 4.1E-10 65.7 9.7 88 177-265 43-165 (167)
422 2znm_A Thiol:disulfide interch 98.1 9.1E-06 3.1E-10 68.4 9.2 91 47-141 21-185 (195)
423 1r7h_A NRDH-redoxin; thioredox 98.1 7E-06 2.4E-10 57.1 7.1 68 182-262 3-73 (75)
424 3qpm_A Peroxiredoxin; oxidored 98.1 8.6E-06 2.9E-10 70.9 8.8 76 47-122 76-188 (240)
425 3uma_A Hypothetical peroxiredo 98.1 1.4E-05 4.7E-10 66.5 9.0 63 27-89 32-101 (184)
426 3gv1_A Disulfide interchange p 98.1 8.5E-06 2.9E-10 64.9 7.3 80 46-134 12-137 (147)
427 3l9v_A Putative thiol-disulfid 98.1 6.2E-06 2.1E-10 69.0 6.8 41 48-88 14-57 (189)
428 2wfc_A Peroxiredoxin 5, PRDX5; 98.1 9.6E-06 3.3E-10 66.4 7.7 43 47-89 30-76 (167)
429 2cq9_A GLRX2 protein, glutared 98.1 5.5E-06 1.9E-10 64.7 5.8 66 38-114 18-90 (130)
430 3p7x_A Probable thiol peroxida 98.1 9.2E-06 3.2E-10 66.4 7.4 83 32-117 31-144 (166)
431 3ztl_A Thioredoxin peroxidase; 98.0 1.4E-05 4.6E-10 68.8 8.7 88 177-264 68-195 (222)
432 1tp9_A Peroxiredoxin, PRX D (t 98.0 5.4E-06 1.8E-10 67.6 5.5 43 47-89 34-80 (162)
433 2rem_A Disulfide oxidoreductas 98.0 4E-05 1.4E-09 64.2 11.1 42 47-88 24-65 (193)
434 1xzo_A BSSCO, hypothetical pro 98.0 1.2E-05 4.1E-10 66.1 7.5 90 177-266 32-171 (174)
435 4gqc_A Thiol peroxidase, perox 98.0 2.1E-06 7.2E-11 70.1 2.8 103 32-134 16-158 (164)
436 2ht9_A Glutaredoxin-2; thiored 98.0 3.8E-06 1.3E-10 66.9 4.1 65 39-114 41-112 (146)
437 3a2v_A Probable peroxiredoxin; 98.0 8.8E-06 3E-10 70.9 6.6 88 47-134 32-160 (249)
438 3feu_A Putative lipoprotein; a 98.0 9.9E-06 3.4E-10 67.5 6.7 30 48-77 22-51 (185)
439 2ec4_A FAS-associated factor 1 98.0 3.8E-05 1.3E-09 63.1 9.7 95 45-139 52-171 (178)
440 1un2_A DSBA, thiol-disulfide i 98.0 2.4E-06 8.3E-11 71.9 2.5 45 47-91 112-159 (197)
441 2lqo_A Putative glutaredoxin R 98.0 2E-05 6.7E-10 57.1 6.9 74 50-134 4-82 (92)
442 3gkn_A Bacterioferritin comigr 98.0 2.8E-05 9.4E-10 63.2 8.7 86 178-263 35-158 (163)
443 3ic4_A Glutaredoxin (GRX-1); s 98.0 1.1E-05 3.7E-10 58.7 5.6 70 51-132 13-91 (92)
444 1z6m_A Conserved hypothetical 98.0 3.9E-05 1.3E-09 63.2 9.6 41 47-87 26-68 (175)
445 1psq_A Probable thiol peroxida 97.9 1.4E-05 4.9E-10 65.0 6.6 70 34-105 29-102 (163)
446 1xvq_A Thiol peroxidase; thior 97.9 2.1E-05 7.3E-10 64.8 7.5 71 178-250 44-146 (175)
447 2klx_A Glutaredoxin; thioredox 97.9 1.3E-05 4.4E-10 57.9 5.3 55 51-113 7-64 (89)
448 3tjj_A Peroxiredoxin-4; thiore 97.9 1.9E-05 6.5E-10 69.2 7.3 74 47-120 90-200 (254)
449 1q98_A Thiol peroxidase, TPX; 97.9 1.2E-05 4.1E-10 65.6 5.5 57 47-104 42-102 (165)
450 3c1r_A Glutaredoxin-1; oxidize 97.9 7.5E-06 2.6E-10 62.7 4.0 58 52-114 27-92 (118)
451 1v58_A Thiol:disulfide interch 97.9 2.3E-05 7.9E-10 68.2 7.5 86 178-266 97-232 (241)
452 1h75_A Glutaredoxin-like prote 97.9 2.4E-05 8.2E-10 55.3 6.1 69 182-263 3-74 (81)
453 3qmx_A Glutaredoxin A, glutare 97.9 2.8E-05 9.6E-10 57.4 6.4 60 47-114 13-77 (99)
454 3h93_A Thiol:disulfide interch 97.9 3.2E-05 1.1E-09 64.8 7.6 42 177-218 24-65 (192)
455 2yan_A Glutaredoxin-3; oxidore 97.9 3.1E-05 1.1E-09 57.8 6.6 62 43-114 12-82 (105)
456 1kte_A Thioltransferase; redox 97.8 1E-05 3.5E-10 60.5 3.7 55 181-238 13-74 (105)
457 3mng_A Peroxiredoxin-5, mitoch 97.8 6.4E-05 2.2E-09 61.7 8.7 55 35-89 30-88 (173)
458 3l9s_A Thiol:disulfide interch 97.8 5.7E-05 1.9E-09 63.2 8.2 40 48-87 21-63 (191)
459 4hde_A SCO1/SENC family lipopr 97.8 8.4E-05 2.9E-09 60.9 9.1 60 29-89 14-77 (170)
460 1nm3_A Protein HI0572; hybrid, 97.8 0.00031 1.1E-08 61.0 13.3 44 177-220 32-79 (241)
461 3hd5_A Thiol:disulfide interch 97.8 0.0001 3.5E-09 61.8 9.4 43 177-219 24-66 (195)
462 2i3y_A Epididymal secretory gl 97.8 0.00021 7.3E-09 60.8 11.2 42 177-219 55-97 (215)
463 3zrd_A Thiol peroxidase; oxido 97.8 2.8E-05 9.7E-10 65.6 5.5 70 33-104 64-137 (200)
464 1fov_A Glutaredoxin 3, GRX3; a 97.7 5.2E-05 1.8E-09 53.6 5.8 55 52-114 3-61 (82)
465 2khp_A Glutaredoxin; thioredox 97.7 5.7E-05 1.9E-09 54.8 5.8 55 51-113 7-65 (92)
466 3nzn_A Glutaredoxin; structura 97.7 8.3E-05 2.8E-09 55.3 6.8 73 48-131 20-101 (103)
467 2a4v_A Peroxiredoxin DOT5; yea 97.7 0.00012 4.1E-09 59.2 8.3 75 178-253 35-137 (159)
468 2pwj_A Mitochondrial peroxired 97.7 3E-05 1E-09 63.6 4.5 57 49-105 45-108 (171)
469 2cq9_A GLRX2 protein, glutared 97.7 3.9E-05 1.3E-09 59.8 4.9 51 182-238 29-86 (130)
470 2c0d_A Thioredoxin peroxidase 97.7 0.00012 4E-09 62.8 8.4 89 177-265 55-182 (221)
471 2hze_A Glutaredoxin-1; thiored 97.7 1.5E-05 5.3E-10 60.6 2.4 56 180-238 19-81 (114)
472 2lqo_A Putative glutaredoxin R 97.6 0.0002 6.7E-09 51.8 7.8 75 181-267 5-84 (92)
473 3ixr_A Bacterioferritin comigr 97.6 0.00026 8.8E-09 58.5 9.6 86 178-263 51-174 (179)
474 1n8j_A AHPC, alkyl hydroperoxi 97.6 0.00017 6E-09 59.9 8.5 89 178-266 30-155 (186)
475 3a2v_A Probable peroxiredoxin; 97.6 7E-05 2.4E-09 65.2 6.1 86 180-265 36-160 (249)
476 3rhb_A ATGRXC5, glutaredoxin-C 97.6 7.7E-05 2.6E-09 56.5 5.5 62 43-114 14-83 (113)
477 3me7_A Putative uncharacterize 97.6 0.00029 9.9E-09 57.6 9.1 90 178-267 28-162 (170)
478 2r37_A Glutathione peroxidase 97.6 0.00047 1.6E-08 58.3 10.5 42 177-219 37-79 (207)
479 2pn8_A Peroxiredoxin-4; thiore 97.6 0.00024 8.1E-09 60.4 8.6 89 177-265 47-175 (211)
480 3qmx_A Glutaredoxin A, glutare 97.6 0.00013 4.4E-09 53.7 6.0 55 178-238 14-73 (99)
481 3ic4_A Glutaredoxin (GRX-1); s 97.6 8.8E-05 3E-09 53.8 5.0 70 181-263 13-91 (92)
482 2klx_A Glutaredoxin; thioredox 97.5 7.9E-05 2.7E-09 53.7 4.4 52 181-238 7-61 (89)
483 3c1r_A Glutaredoxin-1; oxidize 97.5 4.3E-05 1.5E-09 58.4 3.0 54 182-238 27-88 (118)
484 3msz_A Glutaredoxin 1; alpha-b 97.5 0.00013 4.3E-09 52.4 5.3 73 50-134 4-85 (89)
485 2yzh_A Probable thiol peroxida 97.5 0.00027 9.1E-09 57.8 7.5 42 178-220 47-89 (171)
486 4g2e_A Peroxiredoxin; redox pr 97.5 9.3E-05 3.2E-09 59.7 4.3 87 177-263 29-154 (157)
487 3qpm_A Peroxiredoxin; oxidored 97.5 0.00049 1.7E-08 59.7 9.1 88 177-264 76-203 (240)
488 2ht9_A Glutaredoxin-2; thiored 97.4 0.00014 4.8E-09 57.7 5.2 51 182-238 51-108 (146)
489 3keb_A Probable thiol peroxida 97.4 0.00066 2.3E-08 57.7 9.6 99 32-135 33-175 (224)
490 2ec4_A FAS-associated factor 1 97.4 0.0025 8.6E-08 52.2 12.6 92 176-267 53-168 (178)
491 1psq_A Probable thiol peroxida 97.4 0.00048 1.6E-08 55.8 8.0 43 177-220 41-84 (163)
492 2v2g_A Peroxiredoxin 6; oxidor 97.4 0.00057 1.9E-08 58.9 8.7 87 48-134 29-163 (233)
493 3f4s_A Alpha-DSBA1, putative u 97.4 0.002 6.8E-08 55.2 12.1 40 47-86 38-80 (226)
494 1xcc_A 1-Cys peroxiredoxin; un 97.4 0.00033 1.1E-08 59.9 7.2 85 50-134 34-164 (220)
495 1prx_A HORF6; peroxiredoxin, h 97.4 0.0011 3.8E-08 56.8 10.5 85 50-134 34-167 (224)
496 3gv1_A Disulfide interchange p 97.4 0.00057 1.9E-08 54.3 7.7 80 177-266 13-138 (147)
497 1wik_A Thioredoxin-like protei 97.3 0.00046 1.6E-08 51.8 6.7 66 38-114 6-80 (109)
498 3gha_A Disulfide bond formatio 97.3 0.0012 4.1E-08 55.5 10.0 85 47-136 28-192 (202)
499 1q98_A Thiol peroxidase, TPX; 97.3 0.00061 2.1E-08 55.3 7.7 42 178-220 43-85 (165)
500 2znm_A Thiol:disulfide interch 97.3 0.0014 4.7E-08 54.8 9.8 42 177-218 21-62 (195)
No 1
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=3e-41 Score=316.98 Aligned_cols=313 Identities=17% Similarity=0.287 Sum_probs=261.2
Q ss_pred ccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhh------HHHHHHHHHhCC-CeEEEEEeccccHhHHHh
Q 015217 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALT------PIWEKAATVLKG-VATVAALDANEHQSLAQE 97 (411)
Q Consensus 25 ~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~------~~~~~~~~~~~~-~i~~~~vd~~~~~~~~~~ 97 (411)
.+...+.+.+|+.++|+ .++.++++++|.||||||++|+... |.|++++..+++ .+.+++|||++++++|++
T Consensus 8 ~~~~~~~v~~lt~~~f~-~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~ 86 (367)
T 3us3_A 8 EYDGVDRVINVNAKNYK-NVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKK 86 (367)
T ss_dssp CCCCCCCCEECCTTTHH-HHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHH
T ss_pred CCCCCCccEECCHHHHH-HHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHH
Confidence 45567789999999999 5567789999999999999974333 689999999987 599999999999999999
Q ss_pred cCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhc
Q 015217 98 YGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLK 176 (411)
Q Consensus 98 ~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~ 176 (411)
|+|+++||+++|++|+. ..|.|.++.+.|.+|+.+.+ .+.+..+++ .++.+++..
T Consensus 87 ~~V~~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~-----------------------~~~v~~i~~~~~~~~~~~~ 142 (367)
T 3us3_A 87 LGLTEEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVL-----------------------EDPVELIEGERELQAFENI 142 (367)
T ss_dssp HTCCSTTEEEEEETTEE-EECCSCCSHHHHHHHHHHHH-----------------------SCSEEECCSHHHHHHHHHC
T ss_pred cCCCcCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhc-----------------------CCCcEEcCCHHHHHHHhcc
Confidence 99999999999998864 69999999999999999875 467888865 677776532
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCC-CCH
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-RTA 255 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~~~ 255 (411)
.+++++|.|++++| ....+.|.++|..+++.+.|+.++ +..++++|+++. |+|++|+...+.+..|.|. .+.
T Consensus 143 ~~~~~vv~ff~~~~---~~~~~~f~~~A~~~~~~~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~ 215 (367)
T 3us3_A 143 EDEIKLIGYFKNKD---SEHYKAFKEAAEEFHPYIPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSE 215 (367)
T ss_dssp CSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCH
T ss_pred CCCcEEEEEECCCC---chHHHHHHHHHHhhcCCcEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCH
Confidence 56789999999886 577899999999999999999875 578999999995 9999998866668999995 899
Q ss_pred HHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcC--Ccc--EEE----------eHHHHHHHHHHhhcC-ccEEEEecCC
Q 015217 256 GAIESFALEQLETNVAPPEVTELTSQDVMEEKCG--SAA--ICF----------YLEMLLSVAEKFKRG-HYSFVWAAAG 320 (411)
Q Consensus 256 ~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~--~~~--~~~----------~~~~~~~~a~~~~~~-~~~f~~i~~~ 320 (411)
++|.+|+..+. .|.+.+++.++....+.. ... ++| +.+.++.+|++|+++ .+.|+|+|..
T Consensus 216 ~~l~~fi~~~~-----~p~v~elt~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~ 290 (367)
T 3us3_A 216 EEIVNFVEEHR-----RSTLRKLKPESMYETWEDDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPD 290 (367)
T ss_dssp HHHHHHHHHTC-----SCSEEECCGGGHHHHHHSCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGG
T ss_pred HHHHHHHHHcC-----ccceeecChhhHHHHHhhccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCc
Confidence 99999999885 499999999887666553 222 233 457899999999984 4999999998
Q ss_pred CchhhH----HHhCCCCCCCCeEEEeecCCC--ccccCCC---CCChhHHHHHHHHHccCCCCC
Q 015217 321 KQPDLE----NRVGVGGYGYPALVALNVKKG--VYTPLKS---AFELEHIVEFVKEAGRGGKGN 375 (411)
Q Consensus 321 ~~~~~~----~~f~~~~~~~P~l~v~~~~~~--~~~~~~~---~~~~~~i~~fi~~~~~g~~~~ 375 (411)
.++..+ +.||+. .++|++++++..++ ++..+++ .+|.++|.+|+++++.|+.++
T Consensus 291 ~~~~~l~~~~~~fgl~-~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~~~~Gkl~p 353 (367)
T 3us3_A 291 DFPLLVPYWEKTFDID-LSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLEDVLEGEINT 353 (367)
T ss_dssp GCTTTHHHHHHHHTCC-TTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHHHHHTSSCC
T ss_pred cchhHHHHHHHhcCCC-CCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHHHHcCCcCc
Confidence 777654 469998 47999999997765 3444554 699999999999999996653
No 2
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=100.00 E-value=4.9e-40 Score=307.57 Aligned_cols=310 Identities=19% Similarity=0.280 Sum_probs=259.9
Q ss_pred ccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHH-------HHHHHHHhCC-CeEEEEEeccccHhHHH
Q 015217 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPI-------WEKAATVLKG-VATVAALDANEHQSLAQ 96 (411)
Q Consensus 25 ~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~-------~~~~~~~~~~-~i~~~~vd~~~~~~~~~ 96 (411)
.+...+.+.+|++++|+ .++.++++++|.|||+||+ |+.+.|. |+++++.+++ .+.++.|||++++++|+
T Consensus 6 ~~~~~~~v~~l~~~~f~-~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~ 83 (350)
T 1sji_A 6 TYDGKDRVVSLTEKNFK-QVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAK 83 (350)
T ss_dssp CCCCCCCCEEECHHHHH-HHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHH
T ss_pred CCCCCCccEECCHHHHH-HHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHH
Confidence 34556779999999999 5667789999999999999 9999998 9999999987 59999999999999999
Q ss_pred hcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeC-ccchHHHHh
Q 015217 97 EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELN-SSNFDELVL 175 (411)
Q Consensus 97 ~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~-~~~~~~~~~ 175 (411)
+|+|+++||+++|++|+ ..+|.|.++.+.|.+|+.+.+ .+.+..++ .+++.+++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~-----------------------~~~~~~l~~~~~~~~~~~ 139 (350)
T 1sji_A 84 KLGFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLI-----------------------EDPVEIINSKLEVQAFER 139 (350)
T ss_dssp HHTCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTS-----------------------SCSEEECCSHHHHHHHHH
T ss_pred hcCCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHhc-----------------------CCcceeccchHHHHHHhc
Confidence 99999999999999887 689999999999999998663 56688886 466777643
Q ss_pred cCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCC-CC
Q 015217 176 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-RT 254 (411)
Q Consensus 176 ~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~~ 254 (411)
..++.++|.|++++| ....+.|.++|..+++++.|+.++ ++.+++++++. .|++++|+..++.+..|.|. .+
T Consensus 140 ~~~~~~vv~ff~~~~---~~~~~~~~~~A~~~~~~~~f~~~~---~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~ 212 (350)
T 1sji_A 140 IEDQIKLIGFFKSEE---SEYYKAFEEAAEHFQPYIKFFATF---DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYT 212 (350)
T ss_dssp CCSSCEEEEECSCTT---SHHHHHHHHHHHHTTTTSEEEEEC---CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCC
T ss_pred cCCCcEEEEEECCCC---cHHHHHHHHHHHhhccCcEEEEEC---CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCC
Confidence 155678999999886 556789999999999999999875 67899999999 89999998766668899997 89
Q ss_pred HHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCc-c---EEE----------eHHHHHHHHHHhhc-CccEEEEecC
Q 015217 255 AGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSA-A---ICF----------YLEMLLSVAEKFKR-GHYSFVWAAA 319 (411)
Q Consensus 255 ~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~-~---~~~----------~~~~~~~~a~~~~~-~~~~f~~i~~ 319 (411)
.++|.+|+..+. .|.+.+++..+.......+. . ++| +.+.++.+|++|++ ..+.|+|+|+
T Consensus 213 ~~~l~~fi~~~~-----~p~v~elt~~~~~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~ 287 (350)
T 1sji_A 213 EEELVEFVKEHQ-----RPTLRRLRPEDMFETWEDDLNGIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDP 287 (350)
T ss_dssp HHHHHHHHHHHC-----CCSEEECCTTTHHHHHHSCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECG
T ss_pred HHHHHHHHHHcC-----ccchhhcChhhHHHHhcCCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECc
Confidence 999999999885 48999999987765444322 2 223 35789999999996 3499999999
Q ss_pred CCchhhH----HHhCCCCCCCCeEEEeecCCC-cccc-CC---CCCChhHHHHHHHHHccCCC
Q 015217 320 GKQPDLE----NRVGVGGYGYPALVALNVKKG-VYTP-LK---SAFELEHIVEFVKEAGRGGK 373 (411)
Q Consensus 320 ~~~~~~~----~~f~~~~~~~P~l~v~~~~~~-~~~~-~~---~~~~~~~i~~fi~~~~~g~~ 373 (411)
..++.++ +.||++ ...|++++++..++ +|.. ++ +.++.++|.+|++++++|+.
T Consensus 288 ~~~~~~~~~~~~~~gi~-~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d~~~Gkl 349 (350)
T 1sji_A 288 DDFPLLVAYWEKTFKID-LFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIEDVLSGKI 349 (350)
T ss_dssp GGCHHHHHHHHHHCCSC-TTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHHHHTSCC
T ss_pred hhhHHHHHHHHhhcCCC-ccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHHHhcCcc
Confidence 8888877 889998 36899999997554 5643 43 47999999999999999976
No 3
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=300.55 Aligned_cols=314 Identities=22% Similarity=0.297 Sum_probs=235.0
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHh------CCCeEEEEEeccccHhHHHhcCCCcc
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVL------KGVATVAALDANEHQSLAQEYGIRGF 103 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~------~~~i~~~~vd~~~~~~~~~~~~i~~~ 103 (411)
+.+.+|++++|+ .++.++++++|+||++||++|+++.|.|+++++.+ .+++.++.|||+++.++|++|+|+++
T Consensus 5 ~~v~~l~~~~f~-~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 5 SEITSLDTENID-EILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ---CBCCTTTHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CceEECCHHHHH-HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 457899999999 56677899999999999999999999999999998 34699999999999999999999999
Q ss_pred cEEEEEeCCCCCc-ccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhcCCCeE
Q 015217 104 PTIKVFVPGKPPV-DYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLKSKDLW 181 (411)
Q Consensus 104 P~~~~~~~g~~~~-~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~~~~~~ 181 (411)
|++++|++|+.+. .|.|.++.+.|.+|+.+.+ .+.+..+++ .++.. + ..+..+
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~-----------------------~~~v~~l~~~~~l~~-l-~~~~~~ 138 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQK-----------------------SDPIQEIRDLAEITT-L-DRSKRN 138 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH-----------------------SCCCEEC--------------CCE
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc-----------------------cCCceecCCHHHHHH-h-cCCCCE
Confidence 9999999987655 5999999999999999886 355677754 45655 3 556678
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCC-CCCcccccCCC-CHHHHH
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGAD-KDSPIPYEGAR-TAGAIE 259 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~-~~~~~~y~g~~-~~~~i~ 259 (411)
+|.|+++++. ...+.|.++|..+++++.|+...+ .+++++++.+.| ++++..+ ......|.|.+ +.++|.
T Consensus 139 ~v~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~----~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~ 210 (382)
T 2r2j_A 139 IIGYFEQKDS---DNYRVFERVANILHDDCAFLSAFG----DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTY 210 (382)
T ss_dssp EEEEESCSSS---HHHHHHHHHHHHHTTTCEEEEEES----CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHH
T ss_pred EEEEECCCCC---hhHHHHHHHHHHhhccceEEEEeh----hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHH
Confidence 8889888764 457789999999999999988775 367889999889 5444432 23468899998 899999
Q ss_pred HHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEEE-------------eHHHHHHHHHHhhcCccEEEEecCCCchhhH
Q 015217 260 SFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICF-------------YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLE 326 (411)
Q Consensus 260 ~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~a~~~~~~~~~f~~i~~~~~~~~~ 326 (411)
+|+..+.. |.+.+++..+....++.+.++++ +.+.+.++|.+++++ +.|+|+|+..+..++
T Consensus 211 ~fi~~~~~-----p~v~elt~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~-i~f~~id~~~~~~~~ 284 (382)
T 2r2j_A 211 NWIQDKCV-----PLVREITFENGEELTEEGLPFLILFHMKEDTESLEIFQNEVARQLISEKGT-INFLHADCDKFRHPL 284 (382)
T ss_dssp HHHHHHHS-----CSSEECCHHHHHHHHTTCCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTTT-SEEEEEETTTTHHHH
T ss_pred HHHHhccc-----CceEecChhhHHHHhcCCCcEEEEEecCCchHHHHHHHHHHHHHHHHhCCe-eEEEEEchHHhHHHH
Confidence 99999874 88999999887777777766554 223445556677765 999999999999999
Q ss_pred HHhCCCCCCCCeEEEeecCCCcc--ccCCCCCChhHHHHHHHHHccCCCCCCC-CCCCCcc
Q 015217 327 NRVGVGGYGYPALVALNVKKGVY--TPLKSAFELEHIVEFVKEAGRGGKGNLP-LDGTPSI 384 (411)
Q Consensus 327 ~~f~~~~~~~P~l~v~~~~~~~~--~~~~~~~~~~~i~~fi~~~~~g~~~~~~-~~~~p~~ 384 (411)
..||++..++|++++++.. ..| ..+++.++.++|.+|+++++.|+++..- .+.+|.-
T Consensus 285 ~~~gl~~~~~P~i~i~~~~-~~y~~~~~~~~~~~~~i~~F~~d~~~Gkl~p~~kse~~P~~ 344 (382)
T 2r2j_A 285 LHIQKTPADCPVIAIDSFR-HMYVFGDFKDVLIPGKLKQFVFDLHSGKLHREFHHGPDPTD 344 (382)
T ss_dssp HHTTCCGGGCSEEEEECSS-CEEECCCSGGGGSTTHHHHHHHHHHHTTTSSCC--------
T ss_pred HHcCCCccCCCEEEEEcch-hcCCCCccccccCHHHHHHHHHHHHCCCccccccCCCCCCC
Confidence 9999987779999998753 334 2234567889999999999999996652 2226643
No 4
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=100.00 E-value=3.9e-37 Score=300.63 Aligned_cols=309 Identities=27% Similarity=0.476 Sum_probs=260.3
Q ss_pred CcEEeCccchhHHHhcCC---CeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 31 PVVQLTPNNFKSKVLNAN---GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~---~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
.+.+|++++|++ .+.++ ++++|+||++||++|+++.|.|+++++.+++.+.++.|||++++++|++|||.++|+++
T Consensus 2 ~v~~l~~~~f~~-~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFES-RISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHH-HTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHH-HHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 578999999994 55666 89999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCc-cchHHHHhcCCCeEEEEEe
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNS-SNFDELVLKSKDLWIVEFF 186 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~~~~~~~~~lv~f~ 186 (411)
+|++|+.+.+|.|.++.+.|.+|+.+.+ .+.+..+++ +++.+ +.+.+..++|.|+
T Consensus 81 ~~~~g~~~~~~~G~~~~~~l~~~~~~~~-----------------------~~~~~~i~~~~~~~~-~~~~~~~~vv~~~ 136 (481)
T 3f8u_A 81 IFRDGEEAGAYDGPRTADGIVSHLKKQA-----------------------GPASVPLRTEEEFKK-FISDKDASIVGFF 136 (481)
T ss_dssp EEETTEEEEECCSCSSHHHHHHHHHHHT-----------------------SCSEEEECSHHHHHH-HTTSSSCEEEEEE
T ss_pred EEeCCceeeeecCccCHHHHHHHHHhhc-----------------------ccCceecCCHHHHHH-HHhcCCcEEEEEE
Confidence 9999977889999999999999999874 567888854 55555 4566778888899
Q ss_pred CCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEc------CCCCCccccc-CCCCHHHHH
Q 015217 187 APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG------ADKDSPIPYE-GARTAGAIE 259 (411)
Q Consensus 187 ~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~------~~~~~~~~y~-g~~~~~~i~ 259 (411)
.++| ......|.++|..+++++.|+.++ +..++++|++...| +++|+ ...+....|. |..+.+.|.
T Consensus 137 ~~~~---~~~~~~f~~~a~~~~~~~~F~~~~---~~~~~~~~~v~~~~-i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~ 209 (481)
T 3f8u_A 137 DDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNGEG-IILFRPSHLTNKFEDKTVAYTEQKMTSGKIK 209 (481)
T ss_dssp SCTT---CHHHHHHHHHHHHHTTTSCEEEEC---CHHHHHHHCSSSEE-EEEECCGGGCBTTBCSEEECCCSSCCHHHHH
T ss_pred CCCc---cchHHHHHHHHHHhccCceEEEEC---CHHHHHHhCCCCCc-EEEEecccccCccCCcccccCCCCCCHHHHH
Confidence 8776 566889999999999999999864 77899999999754 88887 3344578888 788999999
Q ss_pred HHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEEE--------------eHHHHHHHHHHhhcCc--cEEEEecCCCch
Q 015217 260 SFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICF--------------YLEMLLSVAEKFKRGH--YSFVWAAAGKQP 323 (411)
Q Consensus 260 ~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~--------------~~~~~~~~a~~~~~~~--~~f~~i~~~~~~ 323 (411)
+||..+.. |.+.+++..+.......+..+++ +...+..+|++|+++. +.|+++|..+..
T Consensus 210 ~fi~~~~~-----p~v~e~t~~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~i~F~~~D~~~~~ 284 (481)
T 3f8u_A 210 KFIQENIF-----GICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFS 284 (481)
T ss_dssp HHHHHHTT-----TTSCEECTTTHHHHTTSSEEEEEECCCTTTCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTH
T ss_pred HHHHHhCC-----CCccccChhHHHHhcCCCceEEEEecccccchhhHHHHHHHHHHHHHHhcCCCceEEEEEEcHHHHH
Confidence 99999864 89999999776554433333443 2456889999999764 999999998889
Q ss_pred hhHHHhCCC--CCCCCeEEEeecCCCccccCCCCCChh--HHHHHHHHHccCCCCCCC
Q 015217 324 DLENRVGVG--GYGYPALVALNVKKGVYTPLKSAFELE--HIVEFVKEAGRGGKGNLP 377 (411)
Q Consensus 324 ~~~~~f~~~--~~~~P~l~v~~~~~~~~~~~~~~~~~~--~i~~fi~~~~~g~~~~~~ 377 (411)
..++.||++ ....|++++++..+.+| .++++++.+ .|++|+++++.|+....-
T Consensus 285 ~~l~~~gl~~~~~~~P~~~i~~~~~~ky-~~~~~~t~e~~~l~~f~~~~~~g~~~~~~ 341 (481)
T 3f8u_A 285 HELSDFGLESTAGEIPVVAIRTAKGEKF-VMQEEFSRDGKALERFLQDYFDGNLKRYL 341 (481)
T ss_dssp HHHGGGTCCCCTTCSCEEEEECSSSCEE-ECCSCCCTTSHHHHHHHHHHHHTCCCCCC
T ss_pred HHHHHcCCCcccCCCcEEEEEcCCCccc-CCCcccCccHHHHHHHHHHHhcCCccccc
Confidence 999999998 34799999998555566 677889999 999999999999886554
No 5
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-37 Score=319.21 Aligned_cols=306 Identities=27% Similarity=0.472 Sum_probs=262.5
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
..+.+++.++|. .. .+++++|.||++||++|+.+.|.|.++++.+++++.|+.|||++++.+|+.|||.++|+++++
T Consensus 440 ~~v~~l~~~~~~-~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 516 (780)
T 3apo_A 440 SHVTTLGPQNFP-AS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVF 516 (780)
T ss_dssp SCEEECCTTTSC-TT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CCCEecCHHHHH-Hc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEE
Confidence 347789999988 44 789999999999999999999999999999998999999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcC--CCeEEEEEeC
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKS--KDLWIVEFFA 187 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~--~~~~lv~f~~ 187 (411)
++|+. .+|.|.++.+.|.+|+.+.+ .+++..++.++|.+.+... +..++|.||+
T Consensus 517 ~~g~~-~~~~g~~~~~~l~~fi~~~~-----------------------~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~a 572 (780)
T 3apo_A 517 NQSSI-HEYEGHHSAEQILEFIEDLR-----------------------NPSVVSLTPSTFNELVKQRKHDEVWMVDFYS 572 (780)
T ss_dssp ETTEE-EEECSCSCHHHHHHHHHHHH-----------------------SCSEEECCHHHHHHHTTTCCTTCCEEEEEEC
T ss_pred cCCce-eeecCcccHHHHHHHHHhhc-----------------------ccceeecCcccHHHHhhccCCCCeEEEEEEC
Confidence 87764 88999999999999999886 3679999999999976553 4689999999
Q ss_pred CCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCC---CcccccC-CCCHHHHHHHHH
Q 015217 188 PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD---SPIPYEG-ARTAGAIESFAL 263 (411)
Q Consensus 188 ~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~---~~~~y~g-~~~~~~i~~fi~ 263 (411)
+||++|+.+.+.|.++|+.+++++.|+.+||+.+..+|++|+|.++|++++|+.+.. .+..|.| .++.++|.+|+.
T Consensus 573 p~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~ 652 (780)
T 3apo_A 573 PWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGL 652 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHH
T ss_pred CCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999987653 3677999 899999999998
Q ss_pred HHhhhcCCCCCceEeCChhHHHHhcC-CccEEE------------eHHHHHHHHHHhhcCccEEEEecCCCchhhHHHhC
Q 015217 264 EQLETNVAPPEVTELTSQDVMEEKCG-SAAICF------------YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVG 330 (411)
Q Consensus 264 ~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~~~~------------~~~~~~~~a~~~~~~~~~f~~i~~~~~~~~~~~f~ 330 (411)
+.. ++.+.+++..+..+.... +..+++ +.+.+.++|.+|+++ +.|+.+|.+.++.++++||
T Consensus 653 ~~~-----~~~v~~l~~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~la~~~~~~-~~~~~vd~~~~~~~~~~~~ 726 (780)
T 3apo_A 653 GFL-----PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWSGPSQNFAPEFELLARMIKGK-VRAGKVDCQAYPQTCQKAG 726 (780)
T ss_dssp TTS-----CCCSEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTTCHHHHHHTT
T ss_pred hhc-----ccccccCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-ceEEEEECCCCHHHHHhcC
Confidence 875 366888887655444443 333333 347889999999887 9999999999999999999
Q ss_pred CCCCCCCeEEEeecCCCccccCCC----CCChhHHHHHHHHHccC
Q 015217 331 VGGYGYPALVALNVKKGVYTPLKS----AFELEHIVEFVKEAGRG 371 (411)
Q Consensus 331 ~~~~~~P~l~v~~~~~~~~~~~~~----~~~~~~i~~fi~~~~~g 371 (411)
+.. +|++++++ .++....+.| ..+.+.|.+||...+..
T Consensus 727 v~~--~Pt~~~~~-~g~~~~~~~G~~~g~~~~~~l~~~l~~~l~~ 768 (780)
T 3apo_A 727 IKA--YPSVKLYQ-YERAKKSIWEEQINSRDAKTIAALIYGKLET 768 (780)
T ss_dssp CCS--SSEEEEEE-EETTTTEEEEEEECCCCHHHHHHHHHHHTTC
T ss_pred CCc--CCEEEEEc-CCCccccccCcccCCcCHHHHHHHHHHHHHH
Confidence 986 99999994 3333223333 68999999999999754
No 6
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=100.00 E-value=1.1e-35 Score=263.79 Aligned_cols=220 Identities=39% Similarity=0.760 Sum_probs=195.4
Q ss_pred CCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC---eEEEEEeccccHhHHHhcCCCcc
Q 015217 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV---ATVAALDANEHQSLAQEYGIRGF 103 (411)
Q Consensus 27 ~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---i~~~~vd~~~~~~~~~~~~i~~~ 103 (411)
.....+..+++++|+ .+..++++++|+||++||++|+.+.|.|.++++.+++. +.++.|||++++++|++|+|.++
T Consensus 12 ~~~~~v~~l~~~~~~-~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 90 (241)
T 3idv_A 12 KEENGVLVLNDANFD-NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGY 90 (241)
T ss_dssp EEETTEEEECTTTHH-HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSS
T ss_pred ccCCCcEEecccCHH-HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcC
Confidence 345779999999999 66678999999999999999999999999999999875 99999999999999999999999
Q ss_pred cEEEEEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEE
Q 015217 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIV 183 (411)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv 183 (411)
|++++|++|+. .+|.|.++.+.+.+|+.+.+... .......+..++..++.+.+ ..+++++|
T Consensus 91 Pt~~~~~~g~~-~~~~g~~~~~~l~~~i~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~v 152 (241)
T 3idv_A 91 PTIKILKKGQA-VDYEGSRTQEEIVAKVREVSQPD----------------WTPPPEVTLVLTKENFDEVV-NDADIILV 152 (241)
T ss_dssp SEEEEEETTEE-EECCSCSCHHHHHHHHHHHHSTT----------------CCCCCCSSEECCTTTHHHHH-HHCSEEEE
T ss_pred CEEEEEcCCCc-ccccCcccHHHHHHHHhhccCcc----------------cccccccceeccHHHHHHhh-ccCCeEEE
Confidence 99999998875 57999999999999998765210 11234568889999999865 56679999
Q ss_pred EEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHH
Q 015217 184 EFFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIES 260 (411)
Q Consensus 184 ~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~ 260 (411)
.||++||++|+.+.+.|.++++.+.++ +.|+.||++.+++++++|+|.++|++++|++|. .+.|.|..+.++|.+
T Consensus 153 ~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~--~~~~~g~~~~~~l~~ 230 (241)
T 3idv_A 153 EFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGR--PYDYNGPREKYGIVD 230 (241)
T ss_dssp EEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTE--EEECCSCCSHHHHHH
T ss_pred EEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCe--EEEecCCCCHHHHHH
Confidence 999999999999999999999999765 999999999999999999999999999998765 667999999999999
Q ss_pred HHHHHhh
Q 015217 261 FALEQLE 267 (411)
Q Consensus 261 fi~~~~~ 267 (411)
|+.++..
T Consensus 231 ~l~~~~~ 237 (241)
T 3idv_A 231 YMIEQSG 237 (241)
T ss_dssp HHHHHTT
T ss_pred HHHhhhC
Confidence 9999875
No 7
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=100.00 E-value=3.5e-35 Score=288.22 Aligned_cols=306 Identities=23% Similarity=0.380 Sum_probs=253.8
Q ss_pred ccccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccHhHHHhcCCC
Q 015217 23 DALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIR 101 (411)
Q Consensus 23 ~~~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~ 101 (411)
...+...+.+..|++++|+ .++.++++++|.||++||++|+.+.|.|+++++.+++. +.++.|||++++.+|++|+|+
T Consensus 7 ~~~~~~~~~v~~l~~~~f~-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~ 85 (504)
T 2b5e_A 7 EAVAPEDSAVVKLATDSFN-EYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIP 85 (504)
T ss_dssp CSSCCTTSSCEECCTTTHH-HHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCC
T ss_pred CCCCCCCCCcEECCHHHHH-HHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCC
Confidence 3456667889999999999 56678999999999999999999999999999999984 999999999999999999999
Q ss_pred cccEEEEEeCCCC--CcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCC-
Q 015217 102 GFPTIKVFVPGKP--PVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSK- 178 (411)
Q Consensus 102 ~~P~~~~~~~g~~--~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~- 178 (411)
++|++++|++|+. ..+|.|.++.+.|.+|+.+.+ .+.+..+++ +..++....
T Consensus 86 ~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~-----------------------~~~v~~i~~--~~~~~~~~~~ 140 (504)
T 2b5e_A 86 GFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQS-----------------------QPAVAVVAD--LPAYLANETF 140 (504)
T ss_dssp SSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHT-----------------------SCSEEECSC--HHHHHHHSCC
T ss_pred cCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhc-----------------------CCcceeHHH--HHHHHhcCCC
Confidence 9999999999986 889999999999999999875 567888887 777654444
Q ss_pred CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCC-C---C
Q 015217 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA-R---T 254 (411)
Q Consensus 179 ~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~-~---~ 254 (411)
...+|.|+.+.. ....+.|.++|..+++++.|+.++ ++++++++. +++|+..+ ....|.|. + +
T Consensus 141 ~~~~v~~f~~~~---~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~ 207 (504)
T 2b5e_A 141 VTPVIVQSGKID---ADFNATFYSMANKHFNDYDFVSAE-----NADDDFKLS----IYLPSAMD-EPVVYNGKKADIAD 207 (504)
T ss_dssp SSCEEEEEESCC---HHHHHHHHHHHHHTTTTCEEEEEE-----CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTS
T ss_pred ceEEEEEeCCCC---chHHHHHHHHHHHhhcCcEEEEEH-----HHHHhcCCe----EEecCCCC-cccccCCcccccCC
Confidence 145555555443 567889999999999999999887 467788876 77776533 47889998 6 8
Q ss_pred HHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEEE-----------eHHHHHHHHHHhhcCccEEEEecCCCch
Q 015217 255 AGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICF-----------YLEMLLSVAEKFKRGHYSFVWAAAGKQP 323 (411)
Q Consensus 255 ~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~a~~~~~~~~~f~~i~~~~~~ 323 (411)
.+.|.+||..+.. |.+.+++..+.......+..+++ +...++++|++|+++ +.|+|+|+..++
T Consensus 208 ~~~l~~fi~~~~~-----p~v~~~t~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~a~~~~~~-i~F~~id~~~~~ 281 (504)
T 2b5e_A 208 ADVFEKWLQVEAL-----PYFGEIDGSVFAQYVESGLPLGYLFYNDEEELEEYKPLFTELAKKNRGL-MNFVSIDARKFG 281 (504)
T ss_dssp HHHHHHHHHHHSS-----CSSCBCCHHHHHHHHHTTSCEEEEEESSHHHHHHHHHHHHHHHHHTTTT-CEEEEEEHHHHT
T ss_pred HHHHHHHHHhccc-----CCcccCCHhHHHHHhcCCCcEEEEEecCcccHHHHHHHHHHHHHhcCCe-eEEEEEehhhhH
Confidence 9999999988854 88999998776555544444333 457899999999987 999999998888
Q ss_pred hhHHHhCCCCCCCCeEEEeecCC-CccccCC--CC-----------CChhHHHHHHHHHccCCCCC
Q 015217 324 DLENRVGVGGYGYPALVALNVKK-GVYTPLK--SA-----------FELEHIVEFVKEAGRGGKGN 375 (411)
Q Consensus 324 ~~~~~f~~~~~~~P~l~v~~~~~-~~~~~~~--~~-----------~~~~~i~~fi~~~~~g~~~~ 375 (411)
.+++.||+ ..+.|++++++..+ .+| .++ ++ ++.+.|.+|+.+++.|+..+
T Consensus 282 ~~~~~~gl-~~~~P~v~i~~~~~~~ky-~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~~g~~~p 345 (504)
T 2b5e_A 282 RHAGNLNM-KEQFPLFAIHDMTEDLKY-GLPQLSEEAFDELSDKIVLESKAIESLVKDFLKGDASP 345 (504)
T ss_dssp THHHHTTC-CSCSSEEEEEETTTTEEE-ECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHcCC-cccCCEEEEEeCCcCccc-CCCCCccchhhccccccccCHHHHHHHHHHHHcCCCCh
Confidence 99999999 67899999998743 455 444 55 89999999999999998743
No 8
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=3.3e-35 Score=303.17 Aligned_cols=331 Identities=23% Similarity=0.453 Sum_probs=258.2
Q ss_pred ccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCccc
Q 015217 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (411)
Q Consensus 25 ~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P 104 (411)
.+..+..+..|+.++|+ ..+.++++++|+||++||++|+.+.|.|+++++.+.+.+.++.|||++++++|++|+|.++|
T Consensus 111 ~~~~~~~v~~l~~~~f~-~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 189 (780)
T 3apo_A 111 IYDDDPEIITLERREFD-AAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYP 189 (780)
T ss_dssp TTTTCTTEEECCHHHHH-HHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------C
T ss_pred ccCCCcceeeechHhHH-hhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceee
Confidence 45667789999999999 55588999999999999999999999999999999988999999999999999999999999
Q ss_pred EEEEEeCCCCCcccCCCCCcchhHHHHHHHHH------------HHHHHhh-----------cCCCC--C----------
Q 015217 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIK------------ALLKERL-----------SGKAT--G---------- 149 (411)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~------------~~~~~~~-----------~~~~~--~---------- 149 (411)
++++|++|+.+.+|.|.++.+.|.+|+.+.+. ..+.+.+ ..... .
T Consensus 190 t~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~vi~f~~~~~~~~~~~~~~~l~~~ 269 (780)
T 3apo_A 190 SLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRSTVTELSTGNFVNAIETAFAAGVGWLITFCSKGEDCLTSQTRLRLSGM 269 (780)
T ss_dssp EEEEECTTSCCEECCSCSCHHHHHHHHHTTSCCCEEECCHHHHHHHHHHHHHHTCEEEEEEECTTSCCCCHHHHHHHHHH
T ss_pred eEEEEeCCcEeeEecCCCCHHHHHHHHHHhchhhheeccchhhHHHHHhhhccCCCEEEEEecCcccccCHHHHHHHHHH
Confidence 99999999888999999999999999865431 0111110 00000 0
Q ss_pred ------------CC------------------CC----------------------------------------------
Q 015217 150 ------------GS------------------SD---------------------------------------------- 153 (411)
Q Consensus 150 ------------~~------------------~~---------------------------------------------- 153 (411)
.. ++
T Consensus 270 f~~~~~f~~v~c~~~~~l~~~~gi~~~p~~~f~~~~~~~~~~~~~~~y~g~~~~~~i~~~i~~~~p~v~~it~~~f~~~~ 349 (780)
T 3apo_A 270 LDGLVNVGWVDCDAQDSLCKSLDTTASTTAYFPPGATLNDREKSSVLFLNSLDAKEIYMEIIHNLPDFELLSANQLEDRL 349 (780)
T ss_dssp TTTTEEEEEEETTTSHHHHTCC-----CEEEECTTCCSSTTTGGGSEEECCCCHHHHHHHHHHHSCCCCEECHHHHHHHH
T ss_pred hhccceEEEEEcCCCHHHHHHhCCCCCceeeeccccccCCCcccceeccccccHHHHHHHHHHhCCCcccCCHHHHHHHh
Confidence 00 00
Q ss_pred -------------------------------C-----------------------C------C-C---------------
Q 015217 154 -------------------------------K-----------------------S------K-S--------------- 157 (411)
Q Consensus 154 -------------------------------~-----------------------~------~-~--------------- 157 (411)
. | . .
T Consensus 350 ~~~~~lv~F~~~~~~~~~~~~~~~~A~~~~~~~i~f~~~D~~~~~~~~~~~~~~~p~i~l~~~~~~e~~~~~~g~~~~~~ 429 (780)
T 3apo_A 350 AHHRWLVFFHFGKNENANDPELKKLKTLLKNEHIQVVRFDCSSAPGICSDLYVFQPSLAVFKGQGTKEYEIHHGKKILYD 429 (780)
T ss_dssp TTSEEEEEEECC-----CCGGGGGHHHHHGGGTEEEEEEEGGGCHHHHHHTTCCSCEEEEEESSTTSSEEECCSCCCHHH
T ss_pred ccCCeEEEEecCCccccchHHHHHHHHhhccCceeEEEEeCCCchhhHhhccccCChhhhccCCCcceeeecccHhhHHH
Confidence 0 0 0 0
Q ss_pred --------CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCc
Q 015217 158 --------DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFN 229 (411)
Q Consensus 158 --------~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~ 229 (411)
..+.+..++.+++.+. .+++++|.||++||++|+.+.|.|.++|+.+++++.|+.||++.+..+++.||
T Consensus 430 i~~f~~~~~~~~v~~l~~~~~~~~---~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~ 506 (780)
T 3apo_A 430 ILAFAKESVNSHVTTLGPQNFPAS---DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYN 506 (780)
T ss_dssp HHHHHHHHHTSCEEECCTTTSCTT---CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTT
T ss_pred HHHHhhhccCCCCEecCHHHHHHc---CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcC
Confidence 0123445555555442 45689999999999999999999999999999899999999999999999999
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCC----c--cEEE--------
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGS----A--AICF-------- 295 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~----~--~~~~-------- 295 (411)
|.++|++++++++. ...|.|..+.++|.+|+.+.+. +.+..++.. .++.+... . .+.|
T Consensus 507 v~~~Pt~~~~~~g~--~~~~~g~~~~~~l~~fi~~~~~-----~~v~~l~~~-~f~~~v~~~~~~~~~lv~F~ap~C~~c 578 (780)
T 3apo_A 507 IQAYPTTVVFNQSS--IHEYEGHHSAEQILEFIEDLRN-----PSVVSLTPS-TFNELVKQRKHDEVWMVDFYSPWSHPS 578 (780)
T ss_dssp CCSSSEEEEEETTE--EEEECSCSCHHHHHHHHHHHHS-----CSEEECCHH-HHHHHTTTCCTTCCEEEEEECTTCHHH
T ss_pred CCcCCeEEEEcCCc--eeeecCcccHHHHHHHHHhhcc-----cceeecCcc-cHHHHhhccCCCCeEEEEEECCCCHHH
Confidence 99999999997644 4788999999999999999885 678888864 45554332 2 1222
Q ss_pred --eHHHHHHHHHHhhcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCC---ccccCCC-CCChhHHHHHHHHHc
Q 015217 296 --YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKG---VYTPLKS-AFELEHIVEFVKEAG 369 (411)
Q Consensus 296 --~~~~~~~~a~~~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~---~~~~~~~-~~~~~~i~~fi~~~~ 369 (411)
+.+.|.++|+.|++. +.|+.+|+..+..+++++++.. +|++++++..+. .+..|.| ..+.++|.+||.+.+
T Consensus 579 ~~~~p~~~~lA~~~~~~-v~~~~vd~~~~~~l~~~~~v~~--~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~ 655 (780)
T 3apo_A 579 QVLMPEWKRMARTLTGL-INVGSVDCGQYHSFCTQENVQR--YPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFL 655 (780)
T ss_dssp HHHHHHHHHHHHHHTTT-SEEEEEETTTTHHHHHHTTCCS--SSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTS
T ss_pred HHhhHHHHHHHHHhhCC-eEEEEEECcchHHHHHHcCCCC--CCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhc
Confidence 348899999999987 9999999999999999999986 999999976443 4667898 899999999999886
Q ss_pred c
Q 015217 370 R 370 (411)
Q Consensus 370 ~ 370 (411)
.
T Consensus 656 ~ 656 (780)
T 3apo_A 656 P 656 (780)
T ss_dssp C
T ss_pred c
Confidence 3
No 9
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.97 E-value=2e-30 Score=243.77 Aligned_cols=227 Identities=23% Similarity=0.439 Sum_probs=191.8
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc--ccHhHHHhcCCCc--ccE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRG--FPT 105 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~--~~~~~~~~~~i~~--~P~ 105 (411)
..+.+++.+++........++++|+||++||++|+++.+.|.++++.+++++.|+.+||+ ..+.+|+.|||.+ +|+
T Consensus 117 p~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~ 196 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPA 196 (361)
T ss_dssp CSEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSE
T ss_pred CcceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCcc
Confidence 346788999998444444568899999999999999999999999999999999999999 7899999999988 999
Q ss_pred EEEEeCCCCCcccC---CCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCC--CC-CCCCcEEeCccchHHHHhcCCC
Q 015217 106 IKVFVPGKPPVDYQ---GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKS--KS-DSNESIELNSSNFDELVLKSKD 179 (411)
Q Consensus 106 ~~~~~~g~~~~~~~---g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~v~~l~~~~~~~~~~~~~~ 179 (411)
++++..|+....|. |..+.+.|.+|+.+.+ .++..+...+.+ .. ....+..++..+|.+.+...++
T Consensus 197 ~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l--------~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k 268 (361)
T 3uem_A 197 VRLITLEEEMTKYKPESEELTAERITEFCHRFL--------EGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKK 268 (361)
T ss_dssp EEEEECC--CCEECCSSCCCCHHHHHHHHHHHH--------TTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTC
T ss_pred EEEEEcCCcccccCCCccccCHHHHHHHHHHHh--------cCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCC
Confidence 99998866566776 7899999999998765 344333333332 11 4567999999999998877889
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcCC--eEEEEEeCCCchhHHhhCccccccEEEEEcCC-CCCcccccCCCCHH
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGK--VKLGHVDCDSEKSLMSKFNVQGFPTILVFGAD-KDSPIPYEGARTAG 256 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~--~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~-~~~~~~y~g~~~~~ 256 (411)
+++|.||++||++|+.+.|.|.++++.+.++ +.++.+|++.+. +++|+|.++|++++|..+ +....+|.|.++.+
T Consensus 269 ~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~ 346 (361)
T 3uem_A 269 NVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLD 346 (361)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHH
T ss_pred cEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHH
Confidence 9999999999999999999999999999875 999999998876 789999999999999655 45689999999999
Q ss_pred HHHHHHHHHh
Q 015217 257 AIESFALEQL 266 (411)
Q Consensus 257 ~i~~fi~~~~ 266 (411)
.|.+|+.++.
T Consensus 347 ~l~~~l~~~~ 356 (361)
T 3uem_A 347 GFKKFLESGG 356 (361)
T ss_dssp HHHHHHTTTS
T ss_pred HHHHHHHhcC
Confidence 9999998764
No 10
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.97 E-value=2.7e-30 Score=226.78 Aligned_cols=196 Identities=21% Similarity=0.284 Sum_probs=168.2
Q ss_pred CCCeEEEEEECC-CChhhhhhhHHHHHHHHHhCCCeEEEEEeccc--cHhHHHhcCCCcccEEEEEeCCCC-CcccCCCC
Q 015217 47 ANGVVLVEFYAP-WCGHCQALTPIWEKAATVLKGVATVAALDANE--HQSLAQEYGIRGFPTIKVFVPGKP-PVDYQGAR 122 (411)
Q Consensus 47 ~~~~~~v~f~~~-~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~--~~~~~~~~~i~~~P~~~~~~~g~~-~~~~~g~~ 122 (411)
++++++++||++ ||++|+.+.|.|+++++. .+++.++.+||++ ++++|++|||.++|++++|.+|+. ..+|.|..
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~ 99 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLP 99 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCC
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccC
Confidence 456788999999 999999999999999865 5689999999999 999999999999999999988866 47899999
Q ss_pred CcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeE-EEEEeCCCChhhhhhhHHHH
Q 015217 123 DVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLW-IVEFFAPWCGHCKKLAPEWK 201 (411)
Q Consensus 123 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~-lv~f~~~~c~~c~~~~~~~~ 201 (411)
+.+.+.+|+...+... .....++...+... ...++++ +|.||++||++|+.+.+.|.
T Consensus 100 ~~~~l~~~l~~~l~~~---------------------~~~~~l~~~~~~~~-~~~~~~~~~v~F~a~wC~~C~~~~p~~~ 157 (226)
T 1a8l_A 100 AGHEFAAFLEDIVDVS---------------------REETNLMDETKQAI-RNIDQDVRILVFVTPTCPYCPLAVRMAH 157 (226)
T ss_dssp CTTHHHHHHHHHHHHH---------------------HTCCCCCHHHHHHH-TTCCSCEEEEEEECSSCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhc---------------------CCCCCCCHHHHHHH-HhcCCCcEEEEEeCCCCCccHHHHHHHH
Confidence 9999999988765311 12345677777764 3444555 99999999999999999999
Q ss_pred HHHHHhc----CCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 202 KAANNLK----GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 202 ~~a~~~~----~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+++..+. +.+.++.||++.+..++++|+|.++|++++|++|.. ...|.|..+.+.+.+|+.+.+
T Consensus 158 ~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~-~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 158 KFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGED-RVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp HHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEE-EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCce-eEEEcCCCCHHHHHHHHHHhh
Confidence 9999998 579999999999999999999999999999986543 678899999999999998764
No 11
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.97 E-value=1.1e-29 Score=223.18 Aligned_cols=196 Identities=16% Similarity=0.222 Sum_probs=166.9
Q ss_pred cCCCeEEEEEE-----CCCChhhhhhhHHHHHHHHHh--CCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCccc
Q 015217 46 NANGVVLVEFY-----APWCGHCQALTPIWEKAATVL--KGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDY 118 (411)
Q Consensus 46 ~~~~~~~v~f~-----~~~C~~C~~~~~~~~~~~~~~--~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~ 118 (411)
...++++|.|| ++||++|+.+.|.|.+++..+ .+++.++.|||+.++++|++|||+++|++++|++|....+|
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~ 97 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRY 97 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEE
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCccccee
Confidence 44556666555 899999999999999998888 67899999999999999999999999999999877778899
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhH
Q 015217 119 QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAP 198 (411)
Q Consensus 119 ~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~ 198 (411)
.|.++.+.+.+|+.+.+.. ...+..++...+..........+++.||++||++|+.+.+
T Consensus 98 ~G~~~~~~l~~~~~~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~ 156 (229)
T 2ywm_A 98 IGLPAGLEFTTLINGIFHV---------------------SQRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAV 156 (229)
T ss_dssp ESCCCTTHHHHHHHHHHHH---------------------HTTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHH
T ss_pred cCCccHHHHHHHHHHHHhc---------------------cCCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHH
Confidence 9999999999999876521 1335667888888754333345588999999999999999
Q ss_pred HHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 199 EWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 199 ~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+.+++..+ +.+.++.||++.++.++++|+|.++|++++ +|. ..+|.|..+.+.+.+|+.+.+.
T Consensus 157 ~~~~~~~~~-~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~--~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 157 MAWDFALAN-DYITSKVIDASENQDLAEQFQVVGVPKIVI--NKG--VAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp HHHHHHHHC-TTEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG--TEEEESCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE--EEEeeCCCCHHHHHHHHHHHhh
Confidence 999999998 579999999999999999999999999998 333 5669999999999999988764
No 12
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.2e-28 Score=221.23 Aligned_cols=229 Identities=33% Similarity=0.578 Sum_probs=184.9
Q ss_pred ccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc--ccHhHHHhcCCCc
Q 015217 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRG 102 (411)
Q Consensus 25 ~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~--~~~~~~~~~~i~~ 102 (411)
.......+++|+.++|++.+...+++++|+||++||++|+.+.|.|+++++.+.+.+.++.|||+ +++++|++|+|.+
T Consensus 12 ~~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~ 91 (298)
T 3ed3_A 12 FYDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNG 91 (298)
T ss_dssp SCSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCB
T ss_pred CCCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCc
Confidence 45567789999999999655567889999999999999999999999999999988999999998 6889999999999
Q ss_pred ccEEEEEeCCC-----------------CCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEe
Q 015217 103 FPTIKVFVPGK-----------------PPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIEL 165 (411)
Q Consensus 103 ~P~~~~~~~g~-----------------~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 165 (411)
+|++++|.+|+ ....|.|.++.+.|++|+.+.+ .+.+..+
T Consensus 92 ~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~-----------------------~~~v~~i 148 (298)
T 3ed3_A 92 FPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRI-----------------------RSYVKKF 148 (298)
T ss_dssp SSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTC-----------------------CCCEEEC
T ss_pred cceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhc-----------------------ccccEEc
Confidence 99999999886 2578999999999999998763 5678888
Q ss_pred Cc-cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHH--hhCc-----c-------
Q 015217 166 NS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM--SKFN-----V------- 230 (411)
Q Consensus 166 ~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~--~~~~-----v------- 230 (411)
++ +++.+++...+.+.+++|... ....+.|.++|..|++++.|+.++......+. ++|+ |
T Consensus 149 ~~~~~l~~~l~~~~~~~vi~fs~~-----~~~~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~ 223 (298)
T 3ed3_A 149 VRIDTLGSLLRKSPKLSVVLFSKQ-----DKISPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKV 223 (298)
T ss_dssp SCGGGHHHHHTSCSSEEEEEEESS-----SSCCHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCceEEEEEcCC-----CcchHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcc
Confidence 55 567776554457777777543 35679999999999999999998833221111 2333 3
Q ss_pred ------ccccEEEEEcCCCCCcccccC-CCCHHHHHHHHHHHhhhcCCCCCceEeCChhHH
Q 015217 231 ------QGFPTILVFGADKDSPIPYEG-ARTAGAIESFALEQLETNVAPPEVTELTSQDVM 284 (411)
Q Consensus 231 ------~~~P~i~~~~~~~~~~~~y~g-~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~ 284 (411)
...|+|++|+...+.++.|.| ..+.++|.+||.+... ..|.+.+++..+.+
T Consensus 224 ~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~~~i~~fi~~~~~---~~p~~~~ls~~~~~ 281 (298)
T 3ed3_A 224 IPEQRQSDKSKLVVFDADKDKFWEYEGNSINKNDISKFLRDTFS---ITPNEGPFSRRSEY 281 (298)
T ss_dssp HHHHTTCSSCEEEEEETTTTEEEECCCSSCCHHHHHHHHHHHHT---CCCSSSTTSHHHHH
T ss_pred cccccccCCCeEEEEcCCCCceEEeccccCCHHHHHHHHHhhcC---CCCCcCCCchHHHH
Confidence 568999999887777999996 6899999999996654 34777777775533
No 13
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.96 E-value=1.8e-26 Score=216.90 Aligned_cols=306 Identities=14% Similarity=0.226 Sum_probs=244.0
Q ss_pred CCCCcEEeCc-cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 28 SSSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 28 ~~~~~~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
.+..+..+++ ++++ .++..+..++|.|+.+.+..+ ...+.+++..+ +.+.|+.+ .++++|+++++.. |++
T Consensus 15 ~~~~~~~l~~~~~~~-~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t---~~~~v~~~~~v~~-~~i 85 (361)
T 3uem_A 15 GSEFATTLPDGAAAE-SLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGIT---SNSDVFSKYQLDK-DGV 85 (361)
T ss_dssp CCSSSEECCSHHHHH-HHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEE---CCHHHHHHTTCSS-SEE
T ss_pred ccccceecCCHHHHH-HHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEE---CcHHHHHHhCCCC-CeE
Confidence 4455677755 6666 667788999999998776655 46888999988 56788644 4789999999988 999
Q ss_pred EEEeC-CCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEEEE
Q 015217 107 KVFVP-GKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEF 185 (411)
Q Consensus 107 ~~~~~-g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f 185 (411)
++|+. ......|.|..+.+.|.+|+... ..+.+.+++.+++...+....++++|+|
T Consensus 86 ~lfk~f~~~~~~~~g~~~~~~i~~fi~~~-----------------------~~p~v~~~~~~~~~~~~~~~~~~~~v~F 142 (361)
T 3uem_A 86 VLFKKFDEGRNNFEGEVTKENLLDFIKHN-----------------------QLPLVIEFTEQTAPKIFGGEIKTHILLF 142 (361)
T ss_dssp EEEESSTTSEEECCSCCCHHHHHHHHHHH-----------------------SSCSEEECSTTTHHHHHSCSCCEEEEEE
T ss_pred EEEEecCCCccccCCcCCHHHHHHHHHHc-----------------------CCCcceecCcccHHHHhcCCCCcEEEEE
Confidence 99976 23457889999999999999876 4678999999999997666667889999
Q ss_pred eCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC--CchhHHhhCcccc--ccEEEEEcCCCCCccccc---CCCCHHHH
Q 015217 186 FAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQG--FPTILVFGADKDSPIPYE---GARTAGAI 258 (411)
Q Consensus 186 ~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~l~~~~~v~~--~P~i~~~~~~~~~~~~y~---g~~~~~~i 258 (411)
+++||++|+.+.+.|.++|+.+++++.|+.+||+ ....+++.||+.. +|+++++..++. ...|. |..+.++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~-~~ky~~~~~~~~~~~l 221 (361)
T 3uem_A 143 LPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEE-MTKYKPESEELTAERI 221 (361)
T ss_dssp CCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHH
T ss_pred EeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCc-ccccCCCccccCHHHH
Confidence 9999999999999999999999999999999999 6889999999987 999999987442 45665 78999999
Q ss_pred HHHHHHHhhhcCC-------------CCCceEeCChhHHHHhc-CCccEEE------------eHHHHHHHHHHhhcC-c
Q 015217 259 ESFALEQLETNVA-------------PPEVTELTSQDVMEEKC-GSAAICF------------YLEMLLSVAEKFKRG-H 311 (411)
Q Consensus 259 ~~fi~~~~~~~~~-------------~~~v~~l~~~~~~~~~~-~~~~~~~------------~~~~~~~~a~~~~~~-~ 311 (411)
.+|+...+..... ...+..++..+...... .++.+++ +.+.|.++|..|+++ .
T Consensus 222 ~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~ 301 (361)
T 3uem_A 222 TEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHEN 301 (361)
T ss_dssp HHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSS
T ss_pred HHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCc
Confidence 9999998764321 12367777765544443 3333333 448999999999875 5
Q ss_pred cEEEEecCCCchhhHHHhCCCCCCCCeEEEeecC-CCccccCCCCCChhHHHHHHHHHcc
Q 015217 312 YSFVWAAAGKQPDLENRVGVGGYGYPALVALNVK-KGVYTPLKSAFELEHIVEFVKEAGR 370 (411)
Q Consensus 312 ~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~-~~~~~~~~~~~~~~~i~~fi~~~~~ 370 (411)
+.|+.+|...+. +..|++.. +|++++++.. +.....|.|..+.+.|.+||++...
T Consensus 302 v~~~~vd~~~~~--~~~~~v~~--~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~~ 357 (361)
T 3uem_A 302 IVIAKMDSTANE--VEAVKVHS--FPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQ 357 (361)
T ss_dssp EEEEEEETTTCB--CSSCCCCS--SSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTSC
T ss_pred EEEEEEECCccc--hhhcCCcc--cCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcCC
Confidence 899999987665 67899986 9999999644 4456789999999999999987643
No 14
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.95 E-value=2.8e-26 Score=202.41 Aligned_cols=201 Identities=13% Similarity=0.185 Sum_probs=163.4
Q ss_pred cchhHHHhcCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHh---CCC--eEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 38 NNFKSKVLNANGVVLVEFYAPW--CGHCQALTPIWEKAATVL---KGV--ATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~~~--C~~C~~~~~~~~~~~~~~---~~~--i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
+++.+.+..-+++++|.||++| |++|+.+.+.+.++++.. +++ +.|+.+|+++++++|++|||.++|++.++
T Consensus 15 ~ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~- 93 (243)
T 2hls_A 15 RELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL- 93 (243)
T ss_dssp HHHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-
T ss_pred HHHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-
Confidence 4555444445689999999999 999999999999999884 444 99999999999999999999999999998
Q ss_pred CCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCC
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWC 190 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c 190 (411)
+| ..+|.|..+...+..|+...+... + ....++...+........+.+++.||++||
T Consensus 94 ~g--~~~~~G~~~~~~l~~fv~~~l~~~------~---------------~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC 150 (243)
T 2hls_A 94 GG--EVRWTGIPAGEEIRALVEVIMRLS------E---------------DESGLEDATKEALKSLKGRVHIETIITPSC 150 (243)
T ss_dssp TT--TEEEESCCCTTHHHHHHHHHHHHH------T---------------TCCCCCHHHHHHHHHCCSCEEEEEEECSSC
T ss_pred CC--ceeEcCCCcHHHHHHHHHHHHhcc------C---------------CCCCCCHHHHHHHHHcCCCcEEEEEECCCC
Confidence 55 688999888888998887665211 1 111234444444222235678999999999
Q ss_pred hhhhhhhHHHHHHHHHhc----CCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 191 GHCKKLAPEWKKAANNLK----GKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 191 ~~c~~~~~~~~~~a~~~~----~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|+.+.|.|.+++..+. ..+.++.||++.++.++++|+|.++|++++ + ++ ..|.|..+.++|.+++.+.+
T Consensus 151 ~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~-G~--~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 151 PYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--N-GY--LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--T-TE--EEEESCCCHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--C-CE--EEEeCCCCHHHHHHHHHHHh
Confidence 999999999999999983 569999999999999999999999999988 3 32 34999999999999999987
Q ss_pred h
Q 015217 267 E 267 (411)
Q Consensus 267 ~ 267 (411)
.
T Consensus 226 ~ 226 (243)
T 2hls_A 226 E 226 (243)
T ss_dssp T
T ss_pred h
Confidence 5
No 15
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.93 E-value=1.2e-23 Score=186.43 Aligned_cols=216 Identities=22% Similarity=0.386 Sum_probs=161.4
Q ss_pred cccccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC---CeEEEEEec--cccHhHHH
Q 015217 22 SDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDA--NEHQSLAQ 96 (411)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~i~~~~vd~--~~~~~~~~ 96 (411)
..+++...+.+..++.++|+..+..++++++|+||++||++|+++.|.|+++++.+++ .+.++.||| ++++++|+
T Consensus 4 ~~~l~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~ 83 (244)
T 3q6o_A 4 MSALYSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCR 83 (244)
T ss_dssp --CCSCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHH
T ss_pred ccCCCCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHH
Confidence 3457778889999999999977777789999999999999999999999999999987 799999999 67899999
Q ss_pred hcCCCcccEEEEEeCCCCC-----cccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchH
Q 015217 97 EYGIRGFPTIKVFVPGKPP-----VDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFD 171 (411)
Q Consensus 97 ~~~i~~~P~~~~~~~g~~~-----~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 171 (411)
+|+|.++|++++|.+|+.. .++.| .+.+.+.+++.+.++... .+ .....+++..++..++.
T Consensus 84 ~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~------------~~-~p~~~p~l~~~~~~~l~ 149 (244)
T 3q6o_A 84 DFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH------------DT-WPPACPPLEPAXLEEID 149 (244)
T ss_dssp HTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT------------TS-CCTTSCCCSCCCHHHHH
T ss_pred HcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc------------cc-CCCCCCCcccccHHHHH
Confidence 9999999999999875432 25666 688999999988774211 01 11233444556667777
Q ss_pred HHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCccc
Q 015217 172 ELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIP 248 (411)
Q Consensus 172 ~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~ 248 (411)
.++... ....+++|....| ....+++..+.. .+.+..++ +.+..++++|||+.+|+++++..++. ...
T Consensus 150 ~~~~~~~~~~~al~f~~~~~-------~~~~~~~~d~~~~~~i~v~~~~-~~~~~l~~~f~v~~~Pslvl~~~~g~-~~~ 220 (244)
T 3q6o_A 150 GFFARNNEEYLALIFEXGGS-------YLAREVALDLSQHKGVAVRRVL-NTEANVVRKFGVTDFPSCYLLFRNGS-VSR 220 (244)
T ss_dssp THHHHCCCSEEEEEEECTTC-------CHHHHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSC-EEE
T ss_pred HHhhcCCCceEEEEEEECCc-------chHHHHHHHhccCCceEEEEEe-CchHHHHHHcCCCCCCeEEEEeCCCC-eEe
Confidence 766544 3466677776543 234455556663 58888777 55689999999999999999986654 666
Q ss_pred ccCCCCHHHHHH
Q 015217 249 YEGARTAGAIES 260 (411)
Q Consensus 249 y~g~~~~~~i~~ 260 (411)
+.......+..+
T Consensus 221 ~~~~~~~r~~~~ 232 (244)
T 3q6o_A 221 VPVLMESRSFYT 232 (244)
T ss_dssp CCCSSSSHHHHH
T ss_pred eccccccHHHHH
Confidence 665444433333
No 16
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=8.3e-24 Score=192.12 Aligned_cols=207 Identities=28% Similarity=0.518 Sum_probs=170.9
Q ss_pred CCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC--CchhHHhhCccccc
Q 015217 156 KSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGF 233 (411)
Q Consensus 156 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~l~~~~~v~~~ 233 (411)
....+.+++|+..+|.+.+.+.+++++|.||++||++|+.+.|.|.++++.+.+.+.++.|+|+ .+..+|++|+|.++
T Consensus 13 ~~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~ 92 (298)
T 3ed3_A 13 YDSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGF 92 (298)
T ss_dssp CSSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBS
T ss_pred CCCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCcc
Confidence 3467889999999999987667789999999999999999999999999999988999999998 67899999999999
Q ss_pred cEEEEEcCCC----------------CCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCc-cEEE-
Q 015217 234 PTILVFGADK----------------DSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSA-AICF- 295 (411)
Q Consensus 234 P~i~~~~~~~----------------~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~-~~~~- 295 (411)
|++++|+++. .....|.|.++.+.|.+|+.+.+. +.+.++++.+.++.+.... .+++
T Consensus 93 Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~-----~~v~~i~~~~~l~~~l~~~~~~~vi 167 (298)
T 3ed3_A 93 PTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIR-----SYVKKFVRIDTLGSLLRKSPKLSVV 167 (298)
T ss_dssp SEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCC-----CCEEECSCGGGHHHHHTSCSSEEEE
T ss_pred ceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcc-----cccEEcCCHHHHHHHHhcCCceEEE
Confidence 9999998764 136789999999999999998864 6788898877777766542 2222
Q ss_pred -------eHHHHHHHHHHhhcCccEEEEecCCCchhhH--HHhC-----C-----------CCCCCCeEEEeecCCCccc
Q 015217 296 -------YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLE--NRVG-----V-----------GGYGYPALVALNVKKGVYT 350 (411)
Q Consensus 296 -------~~~~~~~~a~~~~~~~~~f~~i~~~~~~~~~--~~f~-----~-----------~~~~~P~l~v~~~~~~~~~ 350 (411)
....|..+|..|+++ +.|+.+...+..... ++|+ + .....|+|++|+...+++.
T Consensus 168 ~fs~~~~~~~~f~~~A~~~~~~-~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~ 246 (298)
T 3ed3_A 168 LFSKQDKISPVYKSIALDWLGK-FDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFW 246 (298)
T ss_dssp EEESSSSCCHHHHHHHHHTBTT-EEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEE
T ss_pred EEcCCCcchHHHHHHHHHhhcC-cEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceE
Confidence 348999999999998 999999874333222 3333 1 1135999999998888999
Q ss_pred cCCC-CCChhHHHHHHHHH
Q 015217 351 PLKS-AFELEHIVEFVKEA 368 (411)
Q Consensus 351 ~~~~-~~~~~~i~~fi~~~ 368 (411)
.|+| .++.++|.+||.+.
T Consensus 247 ~y~g~~~~~~~i~~fi~~~ 265 (298)
T 3ed3_A 247 EYEGNSINKNDISKFLRDT 265 (298)
T ss_dssp ECCCSSCCHHHHHHHHHHH
T ss_pred EeccccCCHHHHHHHHHhh
Confidence 9995 69999999999865
No 17
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.92 E-value=3.4e-23 Score=183.23 Aligned_cols=206 Identities=32% Similarity=0.532 Sum_probs=169.8
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEeCCCchhHHhhCcccccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
....+..++.++|.+.+ ..+++++|.||++||++|+.+.|.|.++++.+.+. +.|+.||++.+..++++|+|.++|
T Consensus 13 ~~~~v~~l~~~~~~~~~-~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~P 91 (241)
T 3idv_A 13 EENGVLVLNDANFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYP 91 (241)
T ss_dssp EETTEEEECTTTHHHHH-TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCCcEEecccCHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCC
Confidence 45679999999999864 66789999999999999999999999999999876 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCC--CCCceEeCChhHHHHhcCCccEEE------------eHHHH
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLETNVA--PPEVTELTSQDVMEEKCGSAAICF------------YLEML 300 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~--~~~v~~l~~~~~~~~~~~~~~~~~------------~~~~~ 300 (411)
++++|+++. .+.|.|..+.+.+.+|+.+....... ...+..++..+.-.....+..+++ +.+.+
T Consensus 92 t~~~~~~g~--~~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~ 169 (241)
T 3idv_A 92 TIKILKKGQ--AVDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEY 169 (241)
T ss_dssp EEEEEETTE--EEECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHH
T ss_pred EEEEEcCCC--cccccCcccHHHHHHHHhhccCcccccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHH
Confidence 999998765 56899999999999999998764322 223555555444333333344333 34789
Q ss_pred HHHHHHhhcC--ccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCCCChhHHHHHHHHHcc
Q 015217 301 LSVAEKFKRG--HYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGR 370 (411)
Q Consensus 301 ~~~a~~~~~~--~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~~~~~~i~~fi~~~~~ 370 (411)
..+|..++++ .+.|+.+|.+.+++++++|++.. +|++++++ +++...|.|..+.++|.+||.+.+.
T Consensus 170 ~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~--~Pt~~~~~--~g~~~~~~g~~~~~~l~~~l~~~~~ 237 (241)
T 3idv_A 170 EKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSG--YPTLKIFR--KGRPYDYNGPREKYGIVDYMIEQSG 237 (241)
T ss_dssp HHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCS--SSEEEEEE--TTEEEECCSCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcc--cCEEEEEE--CCeEEEecCCCCHHHHHHHHHhhhC
Confidence 9999999864 38999999999999999999986 99999996 3445569999999999999998853
No 18
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.91 E-value=2.5e-23 Score=194.23 Aligned_cols=207 Identities=18% Similarity=0.237 Sum_probs=174.1
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHH-------HHHHHHHhcC-CeEEEEEeCCCchhHHhhCc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPE-------WKKAANNLKG-KVKLGHVDCDSEKSLMSKFN 229 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~-------~~~~a~~~~~-~~~f~~v~~~~~~~l~~~~~ 229 (411)
..+.+..|+..+|.+.+ ..+++++|.||++||+ |+.+.|. |.++|+.+.+ .+.|+.|||+.+..+|++|+
T Consensus 9 ~~~~v~~l~~~~f~~~i-~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~ 86 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVL-KKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLG 86 (350)
T ss_dssp CCCCCEEECHHHHHHHH-TTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHT
T ss_pred CCCccEECCHHHHHHHH-hhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcC
Confidence 34669999999999864 5678999999999999 9999888 9999999987 49999999999999999999
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcC-Ccc-EEE---------eHH
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCG-SAA-ICF---------YLE 298 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~-~~~---------~~~ 298 (411)
|.++|++++|++|. ...|.|.++.+.|.+|+.+.+. |.+.++++.+.++.+.. ... .++ ..+
T Consensus 87 v~~~Pt~~~~~~g~--~~~~~G~~~~~~l~~~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~ 159 (350)
T 1sji_A 87 FDEEGSLYVLKGDR--TIEFDGEFAADVLVEFLLDLIE-----DPVEIINSKLEVQAFERIEDQIKLIGFFKSEESEYYK 159 (350)
T ss_dssp CCSTTEEEEEETTE--EEEECSCCCHHHHHHHHHTTSS-----CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTSHHHH
T ss_pred CCccceEEEEECCc--EEEecCCCCHHHHHHHHHHhcC-----CcceeccchHHHHHHhccCCCcEEEEEECCCCcHHHH
Confidence 99999999998765 7799999999999999998874 77889988777777654 333 222 247
Q ss_pred HHHHHHHHhhcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCC-CChhHHHHHHHHHccCCCCCCC
Q 015217 299 MLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSA-FELEHIVEFVKEAGRGGKGNLP 377 (411)
Q Consensus 299 ~~~~~a~~~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~-~~~~~i~~fi~~~~~g~~~~~~ 377 (411)
.|..+|..+++. +.|+.+.. ++++++++++ .|+++++++.++.+..|+|. ++.++|.+||.....+......
T Consensus 160 ~~~~~A~~~~~~-~~f~~~~~---~~~~~~~~v~---~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~v~elt 232 (350)
T 1sji_A 160 AFEEAAEHFQPY-IKFFATFD---KGVAKKLSLK---MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPTLRRLR 232 (350)
T ss_dssp HHHHHHHHTTTT-SEEEEECC---HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCSEEECC
T ss_pred HHHHHHHhhccC-cEEEEECC---HHHHHHcCCC---CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccchhhcC
Confidence 999999999988 99998865 7899999997 89999998766677789987 9999999999998665544444
Q ss_pred CCC
Q 015217 378 LDG 380 (411)
Q Consensus 378 ~~~ 380 (411)
...
T Consensus 233 ~~~ 235 (350)
T 1sji_A 233 PED 235 (350)
T ss_dssp TTT
T ss_pred hhh
Confidence 433
No 19
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.91 E-value=4.4e-23 Score=193.43 Aligned_cols=199 Identities=19% Similarity=0.245 Sum_probs=168.7
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhh------HHHHHHHHHhcC-CeEEEEEeCCCchhHHhhCcc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLA------PEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNV 230 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~------~~~~~~a~~~~~-~~~f~~v~~~~~~~l~~~~~v 230 (411)
..+.|..|+..+|.+.+ ..+++++|.||++||++|.... +.|.++|..+.+ .+.|+.|||+.++.+|++|||
T Consensus 11 ~~~~v~~lt~~~f~~~i-~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V 89 (367)
T 3us3_A 11 GVDRVINVNAKNYKNVF-KKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGL 89 (367)
T ss_dssp CCCCCEECCTTTHHHHH-HHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTC
T ss_pred CCCccEECCHHHHHHHH-hhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCC
Confidence 45679999999999965 6688999999999999974433 689999999987 499999999999999999999
Q ss_pred ccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcC-Ccc-EEE---------eHHH
Q 015217 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCG-SAA-ICF---------YLEM 299 (411)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~-~~~-~~~---------~~~~ 299 (411)
+++||+++|++|. ...|.|.++.+.|.+|+.+++. +.+..+++.+.++.+.. ... .++ ..+.
T Consensus 90 ~~~PTl~~f~~G~--~~~y~G~~~~~~i~~~i~~~~~-----~~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~~~~~~ 162 (367)
T 3us3_A 90 TEEDSIYVFKEDE--VIEYDGEFSADTLVEFLLDVLE-----DPVELIEGERELQAFENIEDEIKLIGYFKNKDSEHYKA 162 (367)
T ss_dssp CSTTEEEEEETTE--EEECCSCCSHHHHHHHHHHHHS-----CSEEECCSHHHHHHHHHCCSSCEEEEECSCTTCHHHHH
T ss_pred CcCceEEEEECCc--EEEeCCCCCHHHHHHHHHHhcC-----CCcEEcCCHHHHHHHhccCCCcEEEEEECCCCchHHHH
Confidence 9999999999764 6799999999999999999875 77889988777777655 322 222 3468
Q ss_pred HHHHHHHhhcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCC-CChhHHHHHHHHHccC
Q 015217 300 LLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSA-FELEHIVEFVKEAGRG 371 (411)
Q Consensus 300 ~~~~a~~~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~-~~~~~i~~fi~~~~~g 371 (411)
|..+|..+++. +.|+.+.. ..++++++++ .|++++|++..+....|+|. .+.+.|.+||......
T Consensus 163 f~~~A~~~~~~-~~F~~~~~---~~~~~~~~v~---~p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 228 (367)
T 3us3_A 163 FKEAAEEFHPY-IPFFATFD---SKVAKKLTLK---LNEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRS 228 (367)
T ss_dssp HHHHHHHHTTT-SCEEEECC---HHHHHHHTCC---TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSC
T ss_pred HHHHHHhhcCC-cEEEEECC---HHHHHHcCCC---CCeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCcc
Confidence 99999999988 89998876 7899999997 59999998766677788985 9999999999987543
No 20
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.89 E-value=5.5e-22 Score=193.41 Aligned_cols=204 Identities=28% Similarity=0.511 Sum_probs=173.0
Q ss_pred CcEEeCccchHHHHhcCC---CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 161 ESIELNSSNFDELVLKSK---DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~---~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
.|..|+..+|.+.+ ..+ ++++|.||++||++|+.+.|.|.++++.+.+.+.|+.|||+.+..+|++|||.++|+++
T Consensus 2 ~v~~l~~~~f~~~i-~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~ 80 (481)
T 3f8u_A 2 DVLELTDDNFESRI-SDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLK 80 (481)
T ss_dssp CCEEECTTTHHHHT-TCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEE
T ss_pred ceEEecHHHHHHHH-HhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 47899999999976 555 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEE---E-------eHHHHHHHHHHh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAIC---F-------YLEMLLSVAEKF 307 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~---~-------~~~~~~~~a~~~ 307 (411)
+|++|. ....|.|..+.+.|.+|+.+.+. |.+.++++.+.++.+...+.++ | ..+.|..+|..+
T Consensus 81 ~~~~g~-~~~~~~G~~~~~~l~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~f~~~a~~~ 154 (481)
T 3f8u_A 81 IFRDGE-EAGAYDGPRTADGIVSHLKKQAG-----PASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNL 154 (481)
T ss_dssp EEETTE-EEEECCSCSSHHHHHHHHHHHTS-----CSEEEECSHHHHHHHTTSSSCEEEEEESCTTCHHHHHHHHHHHHH
T ss_pred EEeCCc-eeeeecCccCHHHHHHHHHhhcc-----cCceecCCHHHHHHHHhcCCcEEEEEECCCccchHHHHHHHHHHh
Confidence 998764 37889999999999999999875 7789999988888877665522 2 348999999999
Q ss_pred hcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeec------CCCccccCC-CCCChhHHHHHHHHHccCCCCCCCC
Q 015217 308 KRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNV------KKGVYTPLK-SAFELEHIVEFVKEAGRGGKGNLPL 378 (411)
Q Consensus 308 ~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~------~~~~~~~~~-~~~~~~~i~~fi~~~~~g~~~~~~~ 378 (411)
+++ +.|+.+.. .+++++++++. |.+++|++ ..+....|+ +.++.+.|.+||.....+.......
T Consensus 155 ~~~-~~F~~~~~---~~~~~~~~v~~---~~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p~v~e~t~ 225 (481)
T 3f8u_A 155 RDN-YRFAHTNV---ESLVNEYDDNG---EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTE 225 (481)
T ss_dssp TTT-SCEEEECC---HHHHHHHCSSS---EEEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTTTSCEECT
T ss_pred ccC-ceEEEECC---HHHHHHhCCCC---CcEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCCCccccCh
Confidence 988 89998865 88999999974 44888873 244556788 7899999999999987655444433
No 21
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.89 E-value=1.1e-21 Score=190.22 Aligned_cols=220 Identities=21% Similarity=0.354 Sum_probs=164.6
Q ss_pred cccccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC---CeEEEEEecc--ccHhHHH
Q 015217 22 SDALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDAN--EHQSLAQ 96 (411)
Q Consensus 22 ~~~~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~i~~~~vd~~--~~~~~~~ 96 (411)
..+++...+.+.+++.++|+..+..++++++|+|||+||++|+.+.|.|+++++.+++ .+.++.|||+ +++++|+
T Consensus 4 ~~~Ly~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~ 83 (519)
T 3t58_A 4 MSVLYSSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCR 83 (519)
T ss_dssp -CCSCCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHH
T ss_pred ccccCCCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHH
Confidence 4467778889999999999976777789999999999999999999999999999987 7999999995 5889999
Q ss_pred hcCCCcccEEEEEeCC----CCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHH
Q 015217 97 EYGIRGFPTIKVFVPG----KPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDE 172 (411)
Q Consensus 97 ~~~i~~~P~~~~~~~g----~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 172 (411)
+|+|.++|++++|.+| +....+.|..+.+.+.+++.+.++.. . .......+++..++..++..
T Consensus 84 ~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~--------~-----~~~P~~~p~l~~it~~~l~~ 150 (519)
T 3t58_A 84 EFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESH--------R-----DTWPPACPPLEPAKLNDIDG 150 (519)
T ss_dssp HTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTC--------C-----SCCCTTCCCCSBCCHHHHTT
T ss_pred HcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhc--------c-----ccCCCCCCccCcCCHHHHHH
Confidence 9999999999999853 33466778899999999998876311 0 01112334455667777777
Q ss_pred HHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccc
Q 015217 173 LVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPY 249 (411)
Q Consensus 173 ~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y 249 (411)
++... ..+.++.|.... .....+++..+.. .+.+..+. +.+..++++|||+.+|+++++..++. ...+
T Consensus 151 ~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~~~~v~v~~v~-~~~~~l~~kfgV~~~Pslvl~~~nGk-~~~~ 221 (519)
T 3t58_A 151 FFTRNKADYLALVFERED-------SYLGREVTLDLSQYHAVAVRRVL-NTESDLVNKFGVTDFPSCYLLLRNGS-VSRV 221 (519)
T ss_dssp GGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSC-EEEC
T ss_pred HhccCCCCeEEEEecCCc-------hHHHHHHHHHhhccCCeeEEEec-CchHHHHHHcCCCCCCeEEEEeCCCc-eeec
Confidence 65444 346677777643 2356677777764 48887776 55789999999999999999987664 3334
Q ss_pred cCCCCH-HHHHHHHH
Q 015217 250 EGARTA-GAIESFAL 263 (411)
Q Consensus 250 ~g~~~~-~~i~~fi~ 263 (411)
....+. ..+..++.
T Consensus 222 ~v~~~~r~~~~~~l~ 236 (519)
T 3t58_A 222 PVLVESRSFYTSYLR 236 (519)
T ss_dssp CCSSCSHHHHHHHHT
T ss_pred ccccccHHHHHHHHH
Confidence 333333 33445544
No 22
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.88 E-value=6.5e-22 Score=186.75 Aligned_cols=197 Identities=19% Similarity=0.379 Sum_probs=143.7
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHh------cCCeEEEEEeCCCchhHHhhCccccc
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNL------KGKVKLGHVDCDSEKSLMSKFNVQGF 233 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~------~~~~~f~~v~~~~~~~l~~~~~v~~~ 233 (411)
+.+..|+..+|.+. ...+++++|.||++||++|+.+.|.|.++|+.+ .+.+.|+.|||+.+..+|++|+|.++
T Consensus 5 ~~v~~l~~~~f~~~-~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~ 83 (382)
T 2r2j_A 5 SEITSLDTENIDEI-LNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKY 83 (382)
T ss_dssp ---CBCCTTTHHHH-HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEE
T ss_pred CceEECCHHHHHHH-HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcC
Confidence 45888999999985 466789999999999999999999999999999 34699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCcc--EEE-------eHHHHHHHH
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAA--ICF-------YLEMLLSVA 304 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~--~~~-------~~~~~~~~a 304 (411)
|++++|++|......|.|.++.+.|.+|+.+.+. +.+.++++.+.++.+..... ++| ..+.|..+|
T Consensus 84 Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~-----~~v~~l~~~~~l~~l~~~~~~~v~ff~~~~~~~~~~f~~~A 158 (382)
T 2r2j_A 84 PTLKLFRNGMMMKREYRGQRSVKALADYIRQQKS-----DPIQEIRDLAEITTLDRSKRNIIGYFEQKDSDNYRVFERVA 158 (382)
T ss_dssp SEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHS-----CCCEEC------------CCEEEEEESCSSSHHHHHHHHHH
T ss_pred CEEEEEeCCcEeeeeecCcchHHHHHHHHHHhcc-----CCceecCCHHHHHHhcCCCCEEEEEECCCCChhHHHHHHHH
Confidence 9999998765322369999999999999999985 56778877666665433333 233 246899999
Q ss_pred HHhhcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecC--CCccccCCCCC-ChhHHHHHHHHHccC
Q 015217 305 EKFKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVK--KGVYTPLKSAF-ELEHIVEFVKEAGRG 371 (411)
Q Consensus 305 ~~~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~--~~~~~~~~~~~-~~~~i~~fi~~~~~g 371 (411)
..++++ +.|+...+ ++++.++++. .| +++++. ......|+|.+ +.++|.+||......
T Consensus 159 ~~~~~~-~~F~~~~~----~~~~~~~v~~--~p--i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p 219 (382)
T 2r2j_A 159 NILHDD-CAFLSAFG----DVSKPERYSG--DN--IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCVP 219 (382)
T ss_dssp HHHTTT-CEEEEEES----CC----------CE--EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHSC
T ss_pred HHhhcc-ceEEEEeh----hhHHhhCCCC--Cc--eEECCCCCCCcCcccCCCCCCHHHHHHHHHhcccC
Confidence 999988 88877765 3677788864 77 455543 23456789998 999999999987643
No 23
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.87 E-value=7.1e-21 Score=166.38 Aligned_cols=199 Identities=16% Similarity=0.207 Sum_probs=161.0
Q ss_pred CCCcEEe-CccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 159 SNESIEL-NSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
...++.| +.+++.++ .+.+++++|.|+++|| ....+.|.++|..++ .+.|+.+. +++++++|+++. |+|+
T Consensus 8 ~~~~~~l~s~~~~~~~-l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~~~F~~t~---~~~v~~~~~v~~-p~i~ 78 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEF-IAATEVAVIGFFQDLE---IPAVPILHSMVQKFP-GVSFGIST---DSEVLTHYNITG-NTIC 78 (227)
T ss_dssp -CCCEECCSHHHHHHH-HHTSSEEEEEECSCSC---STHHHHHHHHTTTCT-TSEEEEEC---CHHHHHHTTCCS-SEEE
T ss_pred cCCCeeeCCHHHHHHH-HhcCCeEEEEEecCCC---chhHHHHHHHHHhCC-CceEEEEC---CHHHHHHcCCCC-CeEE
Confidence 4445666 44777775 5778899999999986 789999999999994 89999854 788999999998 9999
Q ss_pred EEcCCCCCcccccC----CCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCcc---EEE----------eHHHH
Q 015217 238 VFGADKDSPIPYEG----ARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAA---ICF----------YLEML 300 (411)
Q Consensus 238 ~~~~~~~~~~~y~g----~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~---~~~----------~~~~~ 300 (411)
+|+...+....|.| .++.+.|.+|+..+. .|.+.+++..+....+..+.+ ++| +.+.+
T Consensus 79 lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~-----~plv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~ 153 (227)
T 4f9z_D 79 LFRLVDNEQLNLEDEDIESIDATKLSRFIEINS-----LHMVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRY 153 (227)
T ss_dssp EEETTTTEEEEECHHHHHTCCHHHHHHHHHHHC-----CCSEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHH
T ss_pred EEEecCcccccccccccCCCCHHHHHHHHHHhC-----CCceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHH
Confidence 99976555678884 789999999999985 499999998776555544433 223 35889
Q ss_pred HHHHHHhhcCccEEEEecCCC--chhhHHHhCCCCCCCCeEEEeecCCCc-cccCCCCCChhHHHHHHHHHccCC
Q 015217 301 LSVAEKFKRGHYSFVWAAAGK--QPDLENRVGVGGYGYPALVALNVKKGV-YTPLKSAFELEHIVEFVKEAGRGG 372 (411)
Q Consensus 301 ~~~a~~~~~~~~~f~~i~~~~--~~~~~~~f~~~~~~~P~l~v~~~~~~~-~~~~~~~~~~~~i~~fi~~~~~g~ 372 (411)
+.+|++|+++ +.|+|+|.+. +...++.||+...++|++++++..+++ |..-.++++.++|.+|++++++|+
T Consensus 154 ~~vAk~~k~~-i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~~Gk 227 (227)
T 4f9z_D 154 QKAAKLFQGK-ILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFLSGK 227 (227)
T ss_dssp HHHHHHTTTT-CEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhCC-EEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHhCCC
Confidence 9999999998 9999999863 667899999986679999999976654 533347899999999999999996
No 24
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.87 E-value=1.2e-20 Score=167.57 Aligned_cols=207 Identities=21% Similarity=0.313 Sum_probs=165.8
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
..+++..|++.+..+.+...+.+++|.|+++|| ....+.|.++|..+++++.|+.+. +..++++|++.. |+|+
T Consensus 4 ~gP~v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~ 76 (252)
T 2h8l_A 4 GSPASVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGII 76 (252)
T ss_dssp --CCEEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEE
T ss_pred CCCCceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEE
Confidence 457799997655444456777789999999886 678899999999999999999874 677999999997 9999
Q ss_pred EEcCC------CCCcccc-cCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEEE---------------
Q 015217 238 VFGAD------KDSPIPY-EGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICF--------------- 295 (411)
Q Consensus 238 ~~~~~------~~~~~~y-~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~--------------- 295 (411)
+|+++ .+....| .|.++.+.|.+||..+.. |.+.+++..+..... ..++++
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~-----Plv~e~t~~n~~~~~--~~~~~v~~~~~~~~~~~~~~~ 149 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIF-----GICPHMTEDNKDLIQ--GKDLLIAYYDVDYEKNAKGSN 149 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSS-----CSSCEECTTTHHHHS--SSSEEEEEECCBTTTBHHHHH
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhccc-----CCeeecccccHhhhc--CCCeEEEEeecchhhcchhHH
Confidence 99853 2346789 999999999999999864 999999998865542 333332
Q ss_pred -eHHHHHHHHHHhhcC--ccEEEEecCCCchhhHHHhCC--CCCCCCeEEEeecCCCccccCCCCCChhH--HHHHHHHH
Q 015217 296 -YLEMLLSVAEKFKRG--HYSFVWAAAGKQPDLENRVGV--GGYGYPALVALNVKKGVYTPLKSAFELEH--IVEFVKEA 368 (411)
Q Consensus 296 -~~~~~~~~a~~~~~~--~~~f~~i~~~~~~~~~~~f~~--~~~~~P~l~v~~~~~~~~~~~~~~~~~~~--i~~fi~~~ 368 (411)
+...+..+|++|+++ .+.|+|+|...+..+++.||+ +..++|+++|++..+.+| .++++++.+. |.+|++++
T Consensus 150 ~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky-~~~~~~t~~~~~i~~F~~~~ 228 (252)
T 2h8l_A 150 YWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKF-VMQEEFSRDGKALERFLQDY 228 (252)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEE-ECCSCCCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEe-cCCcccCcchHHHHHHHHHH
Confidence 246788899999964 599999999988889999999 556899999998766677 4678899999 99999999
Q ss_pred ccCCCCCCCCCC
Q 015217 369 GRGGKGNLPLDG 380 (411)
Q Consensus 369 ~~g~~~~~~~~~ 380 (411)
+.|+++. .+.+
T Consensus 229 ~~Gkl~~-~~kS 239 (252)
T 2h8l_A 229 FDGNLKR-YLKS 239 (252)
T ss_dssp HHTCSCC-CC--
T ss_pred HCCCccc-cccC
Confidence 9998844 4443
No 25
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.86 E-value=1.1e-20 Score=185.12 Aligned_cols=224 Identities=21% Similarity=0.395 Sum_probs=177.8
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCC-CcccEEEEEe
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGI-RGFPTIKVFV 110 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i-~~~P~~~~~~ 110 (411)
+.+++.+++. .+...+.++++.|+...... ..+.+.+.++++.+++++.|+.+|++..+.+++.+|+ ..+|+++++.
T Consensus 223 v~~~t~~~~~-~~~~~~~~~~~l~~~~~~~~-~~~~~~l~~~a~~~~~~i~F~~id~~~~~~~~~~~gl~~~~P~v~i~~ 300 (504)
T 2b5e_A 223 FGEIDGSVFA-QYVESGLPLGYLFYNDEEEL-EEYKPLFTELAKKNRGLMNFVSIDARKFGRHAGNLNMKEQFPLFAIHD 300 (504)
T ss_dssp SCBCCHHHHH-HHHHTTSCEEEEEESSHHHH-HHHHHHHHHHHHHTTTTCEEEEEEHHHHTTHHHHTTCCSCSSEEEEEE
T ss_pred cccCCHhHHH-HHhcCCCcEEEEEecCcccH-HHHHHHHHHHHHhcCCeeEEEEEehhhhHHHHHHcCCcccCCEEEEEe
Confidence 4567777777 56677888888888765443 7788999999999999999999999999999999999 4589999998
Q ss_pred CCCC-CcccC--CC-----------CCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCC--CCCCCCCcEEeCccchHHHH
Q 015217 111 PGKP-PVDYQ--GA-----------RDVKPIAEFALQQIKALLKERLSGKATGGSSDK--SKSDSNESIELNSSNFDELV 174 (411)
Q Consensus 111 ~g~~-~~~~~--g~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~~ 174 (411)
.... ...+. +. .+.+.+..|+.+.+ .++.....++. +......+..++..+|...+
T Consensus 301 ~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~~~--------~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v 372 (504)
T 2b5e_A 301 MTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLVKDFL--------KGDASPIVKSQEIFENQDSSVFQLVGKNHDEIV 372 (504)
T ss_dssp TTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHHHHHH--------HTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHH
T ss_pred CCcCcccCCCCCccchhhccccccccCHHHHHHHHHHHH--------cCCCChhhhcCCCCccccccceecccccHHHhh
Confidence 6332 22222 33 56677777776654 34443333333 23345789999999999987
Q ss_pred hcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc-C--CeEEEEEeCCCchhHHhhCccccccEEEEEcCCCC-Cccccc
Q 015217 175 LKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-G--KVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD-SPIPYE 250 (411)
Q Consensus 175 ~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~-~--~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~-~~~~y~ 250 (411)
.+.+++++|.||++||++|+.+.|.|.++++.+. + .+.++.+|++.+... . |+|.++||+++|++|.. ....|.
T Consensus 373 ~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~ 450 (504)
T 2b5e_A 373 NDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQ 450 (504)
T ss_dssp HCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCC
T ss_pred ccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEec
Confidence 7778899999999999999999999999999987 3 699999998876543 4 99999999999976543 378899
Q ss_pred CCCCHHHHHHHHHHHhh
Q 015217 251 GARTAGAIESFALEQLE 267 (411)
Q Consensus 251 g~~~~~~i~~fi~~~~~ 267 (411)
|..+.+.+.+|+.++..
T Consensus 451 G~~~~~~l~~~i~~~~~ 467 (504)
T 2b5e_A 451 GSRSLDSLFDFIKENGH 467 (504)
T ss_dssp SCCCHHHHHHHHHHHCT
T ss_pred CCCCHHHHHHHHHhcCC
Confidence 99999999999999864
No 26
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.85 E-value=6.9e-21 Score=150.79 Aligned_cols=112 Identities=24% Similarity=0.453 Sum_probs=96.8
Q ss_pred ccccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC-----CCeEEEEEeccccHhHHHh
Q 015217 23 DALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-----GVATVAALDANEHQSLAQE 97 (411)
Q Consensus 23 ~~~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-----~~i~~~~vd~~~~~~~~~~ 97 (411)
.+.+..+..+..|++++|+..+..++++++|.||++||++|+.+.|.|+++++.+. +++.++.|||++++++|++
T Consensus 8 ~~~~~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~ 87 (127)
T 3h79_A 8 ANDGERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIER 87 (127)
T ss_dssp -----CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHH
T ss_pred CCCcCCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHh
Confidence 34566778899999999996665679999999999999999999999999998763 4699999999999999999
Q ss_pred cCCCcccEEEEEeCCCCC--cccCCCCCcchhHHHHHHH
Q 015217 98 YGIRGFPTIKVFVPGKPP--VDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 98 ~~i~~~P~~~~~~~g~~~--~~~~g~~~~~~l~~~~~~~ 134 (411)
|+|.++|++++|.+|+.. .+|.|.++.+.|.+|+.+.
T Consensus 88 ~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 88 MRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp TTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred cCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 999999999999988663 6899999999999999763
No 27
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.84 E-value=1.6e-19 Score=160.04 Aligned_cols=202 Identities=18% Similarity=0.249 Sum_probs=162.8
Q ss_pred CCCCcEEeCc-cchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 158 DSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
+.+.+..|++ +++.++ .+. +++++|.|++++| ....+.|.++|..+++.+.|+.+. +.+++++++++. |+
T Consensus 4 ~gP~v~~l~s~~~~~~~-~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ 75 (250)
T 3ec3_A 4 GSPPSKEILTLKQVQEF-LKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GK 75 (250)
T ss_dssp -CCSSEECCCHHHHHHH-HHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SE
T ss_pred CCCCceecCCHHHHHHH-HhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-Ce
Confidence 4678899976 566664 555 7889999999876 689999999999999999999864 678999999987 99
Q ss_pred EEEEcCC------CCCccccc--CCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhcCCccEEE------------
Q 015217 236 ILVFGAD------KDSPIPYE--GARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKCGSAAICF------------ 295 (411)
Q Consensus 236 i~~~~~~------~~~~~~y~--g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~------------ 295 (411)
|++|+.+ .+....|. |..+.+.|.+|+..+.. |.+.+++..+....+ .+.++++
T Consensus 76 ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~-----Plv~e~t~~n~~~~~-~~~~l~~~~~~~d~~~~~~ 149 (250)
T 3ec3_A 76 LVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHAL-----PLVGHRKTSNDAKRY-SKRPLVVVYYSVDFSFDYR 149 (250)
T ss_dssp EEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSS-----CTEEEECTTTHHHHS-CSSSEEEEEECCCCSTTTH
T ss_pred EEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCC-----CceeecCccchhhhh-ccCccEEEEEecccccccc
Confidence 9999853 24467888 47899999999999864 999999998766555 3444333
Q ss_pred -----eHHHHHHHHHHhhcCccEEEEecCCCchhhHHHhCCCCCCC-CeEEEeecCCCccccCCCCCChhHHHHHHHHHc
Q 015217 296 -----YLEMLLSVAEKFKRGHYSFVWAAAGKQPDLENRVGVGGYGY-PALVALNVKKGVYTPLKSAFELEHIVEFVKEAG 369 (411)
Q Consensus 296 -----~~~~~~~~a~~~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~-P~l~v~~~~~~~~~~~~~~~~~~~i~~fi~~~~ 369 (411)
+.+.++.+|++|+ + +.|+|+|..++...++.||+...+. |.+++++..+.+|..-.++++.++|.+|+++++
T Consensus 150 ~~~~~~~~~~~~vAk~~k-k-i~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 150 TATQFWRNKVLEVAKDFP-E-YTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHHHHHHHTTCT-T-SEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhhc-c-eeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHH
Confidence 2467889999999 6 9999999988888999999986444 688888866667744337899999999999999
Q ss_pred cCCCCC
Q 015217 370 RGGKGN 375 (411)
Q Consensus 370 ~g~~~~ 375 (411)
+|+.++
T Consensus 228 ~Gkl~p 233 (250)
T 3ec3_A 228 KGKLKP 233 (250)
T ss_dssp TTCCCC
T ss_pred CCCccc
Confidence 998644
No 28
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.84 E-value=5.7e-19 Score=156.17 Aligned_cols=205 Identities=21% Similarity=0.408 Sum_probs=149.8
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CeEEEEEeC--CCchhHHhhCcccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDC--DSEKSLMSKFNVQG 232 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~--~~~~~l~~~~~v~~ 232 (411)
....+..++..+|.+.+.+.+++++|.||++||++|+.+.|.|.++++.+.+ .+.|+.||| +.+..+|++|+|.+
T Consensus 10 ~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~ 89 (244)
T 3q6o_A 10 PSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPG 89 (244)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCS
T ss_pred CCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCc
Confidence 4578999999999998877789999999999999999999999999999987 799999999 66889999999999
Q ss_pred ccEEEEEcCCCCC----cccccCCCCHHHHHHHHHHHhhhcCC-----CCCceEeCChhHHHHh---cCCccEEEe----
Q 015217 233 FPTILVFGADKDS----PIPYEGARTAGAIESFALEQLETNVA-----PPEVTELTSQDVMEEK---CGSAAICFY---- 296 (411)
Q Consensus 233 ~P~i~~~~~~~~~----~~~y~g~~~~~~i~~fi~~~~~~~~~-----~~~v~~l~~~~~~~~~---~~~~~~~~~---- 296 (411)
+|++++|+.+... .+.+.| .+.+.|.+++.+.+..... .|.+..++..+ +..+ .....+.++
T Consensus 90 ~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~-l~~~~~~~~~~~~al~f~~~ 167 (244)
T 3q6o_A 90 FPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEE-IDGFFARNNEEYLALIFEXG 167 (244)
T ss_dssp SSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHH-HHTHHHHCCCSEEEEEEECT
T ss_pred cCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHH-HHHHhhcCCCceEEEEEEEC
Confidence 9999999864431 235666 6999999999998875432 12233333333 3322 222223222
Q ss_pred -HHHHHHHHHHhhcC-ccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCC-CCCChhHHHHHHHHH
Q 015217 297 -LEMLLSVAEKFKRG-HYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLK-SAFELEHIVEFVKEA 368 (411)
Q Consensus 297 -~~~~~~~a~~~~~~-~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~-~~~~~~~i~~fi~~~ 368 (411)
......++..+... .+.+..+.. ....++++||++. +|+++++++++ +...+. ...+.+.+..+|+.+
T Consensus 168 ~~~~~~~~~~d~~~~~~i~v~~~~~-~~~~l~~~f~v~~--~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 168 GSYLAREVALDLSQHKGVAVRRVLN-TEANVVRKFGVTD--FPSCYLLFRNG-SVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TCCHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC--SSEEEEEETTS-CEEECCCSSSSHHHHHHHHHTC
T ss_pred CcchHHHHHHHhccCCceEEEEEeC-chHHHHHHcCCCC--CCeEEEEeCCC-CeEeeccccccHHHHHHHHHhC
Confidence 13455666666643 266665554 4588999999986 99999998654 443444 345666666666655
No 29
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.83 E-value=4.3e-19 Score=155.02 Aligned_cols=206 Identities=15% Similarity=0.186 Sum_probs=168.5
Q ss_pred CCcEEe-CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 30 SPVVQL-TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 30 ~~~~~l-~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
..+..| +.++++ .++..+++++|-|+++|| ....+.|.++|..+ +.+.|+.+. ++++|++|++.+ |++++
T Consensus 9 ~~~~~l~s~~~~~-~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l-~~~~F~~t~---~~~v~~~~~v~~-p~i~l 79 (227)
T 4f9z_D 9 QEPTWLTDVPAAM-EFIAATEVAVIGFFQDLE---IPAVPILHSMVQKF-PGVSFGIST---DSEVLTHYNITG-NTICL 79 (227)
T ss_dssp CCCEECCSHHHHH-HHHHTSSEEEEEECSCSC---STHHHHHHHHTTTC-TTSEEEEEC---CHHHHHHTTCCS-SEEEE
T ss_pred CCCeeeCCHHHHH-HHHhcCCeEEEEEecCCC---chhHHHHHHHHHhC-CCceEEEEC---CHHHHHHcCCCC-CeEEE
Confidence 445566 557888 567789999999999985 68899999999999 478888754 788999999998 99999
Q ss_pred EeCCCC-CcccCC----CCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEE
Q 015217 109 FVPGKP-PVDYQG----ARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIV 183 (411)
Q Consensus 109 ~~~g~~-~~~~~g----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv 183 (411)
|+.... ...|.| .++.+.|.+|+... ..+.+.+++.+++...+......+++
T Consensus 80 fk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~-----------------------~~plv~e~t~~n~~~~~~~~~~~~~l 136 (227)
T 4f9z_D 80 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN-----------------------SLHMVTEYNPVTVIGLFNSVIQIHLL 136 (227)
T ss_dssp EETTTTEEEEECHHHHHTCCHHHHHHHHHHH-----------------------CCCSEEECCHHHHHHHHHSSCCEEEE
T ss_pred EEecCcccccccccccCCCCHHHHHHHHHHh-----------------------CCCceeecCcccHHHHhccCCceEEE
Confidence 987533 456774 78999999999876 46889999999998875444456667
Q ss_pred EEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC--chhHHhhCccc--cccEEEEEcCCCCCcccc-cCCCCHHHH
Q 015217 184 EFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS--EKSLMSKFNVQ--GFPTILVFGADKDSPIPY-EGARTAGAI 258 (411)
Q Consensus 184 ~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~--~~~l~~~~~v~--~~P~i~~~~~~~~~~~~y-~g~~~~~~i 258 (411)
+|..+||+.|..+.+.|.++|+.+++++.|+.+|++. ...+++.||+. .+|+++++...+...+.+ .|.++.++|
T Consensus 137 ~f~~~~~~~~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i 216 (227)
T 4f9z_D 137 LIMNKASPEYEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHV 216 (227)
T ss_dssp EEECTTSTTHHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHH
T ss_pred EEEcCCcchHHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHH
Confidence 7888999999999999999999999999999999864 55788999998 789999997554323444 378999999
Q ss_pred HHHHHHHhh
Q 015217 259 ESFALEQLE 267 (411)
Q Consensus 259 ~~fi~~~~~ 267 (411)
.+|+...+.
T Consensus 217 ~~Fv~~~~~ 225 (227)
T 4f9z_D 217 QNFCDGFLS 225 (227)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999987653
No 30
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=8.9e-20 Score=144.98 Aligned_cols=114 Identities=54% Similarity=1.006 Sum_probs=104.1
Q ss_pred ccccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCc
Q 015217 23 DALYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRG 102 (411)
Q Consensus 23 ~~~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~ 102 (411)
..++.....+..++.++|+..+..++++++|+||++||++|+.+.|.+.++++.+++.+.++.+|++++++++++|+|.+
T Consensus 10 ~~l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 89 (130)
T 2dml_A 10 SGLYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQG 89 (130)
T ss_dssp CCSSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCS
T ss_pred ccccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCc
Confidence 35667778899999999996677788999999999999999999999999999998889999999999999999999999
Q ss_pred ccEEEEEeCCCC-CcccCCCCCcchhHHHHHHHHH
Q 015217 103 FPTIKVFVPGKP-PVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 103 ~P~~~~~~~g~~-~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
+|++++|.+|+. +.+|.|..+.+.+.+|+.+.+.
T Consensus 90 ~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 90 FPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp SSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred cCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 999999988776 7899999999999999988763
No 31
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.82 E-value=7.4e-20 Score=141.11 Aligned_cols=107 Identities=21% Similarity=0.361 Sum_probs=99.4
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
...+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|+|.++|++++
T Consensus 3 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 82 (111)
T 3gnj_A 3 AMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILY 82 (111)
T ss_dssp CCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEE
T ss_pred CCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEE
Confidence 45688999999996665889999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 83 ~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 83 FKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred EECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 999988889999999999999998875
No 32
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.81 E-value=6.5e-20 Score=139.31 Aligned_cols=100 Identities=23% Similarity=0.505 Sum_probs=86.4
Q ss_pred EEe-CccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 33 VQL-TPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 33 ~~l-~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
.++ +.++|++.+.. ++++++|.|||+||++|+.+.|.++++++.++ ++.|+.||++++++++++|+|+++||+++|+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~ 81 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFMK 81 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEEE
Confidence 344 44688855543 47899999999999999999999999999876 4889999999999999999999999999999
Q ss_pred CCCCCcccCCCCCcchhHHHHHHH
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+|+.+.++.| .+.+.|.+++.++
T Consensus 82 ~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 82 NGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CCEEEEEEeC-cCHHHHHHHHHhc
Confidence 9988888888 4788888888754
No 33
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.81 E-value=8.6e-19 Score=153.27 Aligned_cols=184 Identities=16% Similarity=0.199 Sum_probs=145.7
Q ss_pred CCeEEEEEeCC-CChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC--chhHHhhCccccccEEEEEcCCCCCcccccCCCC
Q 015217 178 KDLWIVEFFAP-WCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS--EKSLMSKFNVQGFPTILVFGADKDSPIPYEGART 254 (411)
Q Consensus 178 ~~~~lv~f~~~-~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~--~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~ 254 (411)
+.+++++||++ ||++|+.+.+.+.++++. .+++.|+.||++. ++.++++|||.++|++++|+++.....+|.|..+
T Consensus 22 ~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~ 100 (226)
T 1a8l_A 22 NPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPA 100 (226)
T ss_dssp SCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCC
T ss_pred CCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCc
Confidence 45778999999 999999999999999965 5689999999999 8999999999999999999877654578999888
Q ss_pred HHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhc-CCccE-EE------------eHHHHHHHHHHhhc---CccEEEEe
Q 015217 255 AGAIESFALEQLETNVAPPEVTELTSQDVMEEKC-GSAAI-CF------------YLEMLLSVAEKFKR---GHYSFVWA 317 (411)
Q Consensus 255 ~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~~~-~~------------~~~~~~~~a~~~~~---~~~~f~~i 317 (411)
.+.+.+|+...+..... ...++. +.++.+. ...++ ++ ..+.+.+++..+.+ ..+.|+.+
T Consensus 101 ~~~l~~~l~~~l~~~~~---~~~l~~-~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~v 176 (226)
T 1a8l_A 101 GHEFAAFLEDIVDVSRE---ETNLMD-ETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMV 176 (226)
T ss_dssp TTHHHHHHHHHHHHHHT---CCCCCH-HHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHhhcCC---CCCCCH-HHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEE
Confidence 88999999886643222 222333 3344433 22333 22 34788999999983 23999999
Q ss_pred cCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCCCChhHHHHHHHHHc
Q 015217 318 AAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAG 369 (411)
Q Consensus 318 ~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~~~~~~i~~fi~~~~ 369 (411)
|.+.++.++++|++.. +|++++++ +++....+.|..+.++|.+||+..+
T Consensus 177 d~~~~~~l~~~~~v~~--~Pt~~~~~-~G~~~~~~~G~~~~~~l~~~l~~~l 225 (226)
T 1a8l_A 177 EAIEYPEWADQYNVMA--VPKIVIQV-NGEDRVEFEGAYPEKMFLEKLLSAL 225 (226)
T ss_dssp EGGGCHHHHHHTTCCS--SCEEEEEE-TTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EcccCHHHHHhCCCcc--cCeEEEEe-CCceeEEEcCCCCHHHHHHHHHHhh
Confidence 9988899999999986 99999886 4444556889999999999999875
No 34
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.81 E-value=1.4e-19 Score=138.81 Aligned_cols=106 Identities=35% Similarity=0.706 Sum_probs=97.7
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+.+..++.++|+..+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 46789999999966677889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGEVAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCEEEEEEecCCCHHHHHHHHHHhh
Confidence 88887788999999999999988764
No 35
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.81 E-value=9.8e-20 Score=142.40 Aligned_cols=108 Identities=11% Similarity=0.148 Sum_probs=98.1
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCC--hhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWC--GHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C--~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
......+++++|++.+...+++++|+||++|| ++|+.+.|.++++++.+.+++.+++||.|++++++.+|||+++||+
T Consensus 14 ~~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTl 93 (137)
T 2qsi_A 14 PNAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSL 93 (137)
T ss_dssp ---CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEE
T ss_pred hcCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEE
Confidence 35567999999997665555699999999999 9999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
++|++|+.+.+..|..+.+.+.+++.+.+.
T Consensus 94 ilFkdG~~v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 94 AVVQPERTLGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEEECCEEEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEEECCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999988773
No 36
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.81 E-value=2.3e-19 Score=144.49 Aligned_cols=114 Identities=22% Similarity=0.391 Sum_probs=104.9
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
...+..+++++|.+.+..++++++|+||++||++|+.+.|.|.++++.+++++.|+.||++++++++++|+|.++|++++
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 84 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKF 84 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEE
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEE
Confidence 46688999999997777889999999999999999999999999999999899999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHh
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQIKALLKER 142 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 142 (411)
|.+|+.+.++.|..+.+.+.+++.+.++......
T Consensus 85 ~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~~~ 118 (140)
T 3hz4_A 85 FCHGRPVWEQVGQIYPSILKNAVRDMLQHGEECI 118 (140)
T ss_dssp EETTEEEEEEESSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCcEEEEEcCCCCHHHHHHHHHHHhcccccCc
Confidence 9999888899999999999999999887655443
No 37
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.9e-19 Score=143.58 Aligned_cols=110 Identities=50% Similarity=0.909 Sum_probs=100.8
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC----CCeEEEEEeccccHhHHHhcCCCcc
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK----GVATVAALDANEHQSLAQEYGIRGF 103 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~----~~i~~~~vd~~~~~~~~~~~~i~~~ 103 (411)
....+..++.++|++.+..++++++|+||++||++|+.+.|.+.++++.++ +++.++.||++++++++++|+|.++
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~ 84 (133)
T 1x5d_A 5 SSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGF 84 (133)
T ss_dssp SCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSS
T ss_pred CCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCee
Confidence 456689999999996666788999999999999999999999999999987 7899999999999999999999999
Q ss_pred cEEEEEeCCCCCcccCCCCCcchhHHHHHHHHHH
Q 015217 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKA 137 (411)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~ 137 (411)
|++++|.+|+.+.+|.|..+.+.+.+|+.+.+..
T Consensus 85 Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 85 PTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp SEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 9999999988788999999999999999988754
No 38
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.80 E-value=1.7e-19 Score=143.00 Aligned_cols=108 Identities=11% Similarity=0.158 Sum_probs=95.1
Q ss_pred cEEeCc-cchhHHHh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 32 VVQLTP-NNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+..++. ++|++.+. .++++++|.|||+||++|+.+.|.++++++++.+++.|++||+|+.++++.+|+|...||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 556665 78986666 4788999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCC--c-------ccCCCCC-cchhHHHHHHHHHHHH
Q 015217 110 VPGKPP--V-------DYQGARD-VKPIAEFALQQIKALL 139 (411)
Q Consensus 110 ~~g~~~--~-------~~~g~~~-~~~l~~~~~~~~~~~~ 139 (411)
.+|+.+ . +..|..+ .+.|.+++...++.+.
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r~a~ 142 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFRGAR 142 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHHHhh
Confidence 999875 3 6888876 7889999988876664
No 39
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.80 E-value=2.3e-19 Score=137.72 Aligned_cols=106 Identities=31% Similarity=0.569 Sum_probs=98.1
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
...+..++.++|+ .++.++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++
T Consensus 3 ~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 3 EDVTLVLTEENFD-EVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp CCCCEECCTTTHH-HHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCeEEEecHHHHH-HHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEE
Confidence 4568899999999 566779999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 82 ~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 82 FVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred EcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 998988889999999999999998764
No 40
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.80 E-value=2.3e-18 Score=150.78 Aligned_cols=189 Identities=20% Similarity=0.207 Sum_probs=145.0
Q ss_pred chHHHH-hcCCCeEEEEEe-----CCCChhhhhhhHHHHHHHHHh--cCCeEEEEEeCCCchhHHhhCccccccEEEEEc
Q 015217 169 NFDELV-LKSKDLWIVEFF-----APWCGHCKKLAPEWKKAANNL--KGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (411)
Q Consensus 169 ~~~~~~-~~~~~~~lv~f~-----~~~c~~c~~~~~~~~~~a~~~--~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~ 240 (411)
++.+.+ .+...+++|.|| ++||++|+.+.+.|.++|+.+ .+++.++.|||+.++.+|++|||+++|++++|+
T Consensus 10 ~l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~ 89 (229)
T 2ywm_A 10 QLKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEG 89 (229)
T ss_dssp HHHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEES
T ss_pred HHHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEEC
Confidence 344444 244455555555 788999999999999999888 678999999999999999999999999999997
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHhc-CCccE-E--E----------eHHHHHHHHHH
Q 015217 241 ADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEKC-GSAAI-C--F----------YLEMLLSVAEK 306 (411)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~~-~~~~~-~--~----------~~~~~~~~a~~ 306 (411)
+ +....+|.|..+.+++.+|+......... ...++. +.++.+. ...++ + | ..+.+.+++..
T Consensus 90 ~-~~~~~~~~G~~~~~~l~~~~~~~~~~~~~---~~~l~~-~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~ 164 (229)
T 2ywm_A 90 D-KDYGIRYIGLPAGLEFTTLINGIFHVSQR---KPQLSE-KTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALA 164 (229)
T ss_dssp S-SCCCEEEESCCCTTHHHHHHHHHHHHHTT---CCSCCH-HHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHH
T ss_pred C-CcccceecCCccHHHHHHHHHHHHhccCC---ccCCCH-HHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHH
Confidence 5 44578999999999999999887643322 334444 3344433 23333 2 2 34788888888
Q ss_pred hhcCccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCCCChhHHHHHHHHHcc
Q 015217 307 FKRGHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGR 370 (411)
Q Consensus 307 ~~~~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~~~~~~i~~fi~~~~~ 370 (411)
+ +. +.|+.+|.+.+++++++|++.. +|++++ + + +...+.|..+.++|.+||+..+.
T Consensus 165 ~-~~-v~~~~vd~~~~~~l~~~~~v~~--~Pt~~~-~--G-~~~~~~G~~~~~~l~~~l~~~~~ 220 (229)
T 2ywm_A 165 N-DY-ITSKVIDASENQDLAEQFQVVG--VPKIVI-N--K-GVAEFVGAQPENAFLGYIMAVYE 220 (229)
T ss_dssp C-TT-EEEEEEEGGGCHHHHHHTTCCS--SSEEEE-G--G-GTEEEESCCCHHHHHHHHHHHHH
T ss_pred C-CC-eEEEEEECCCCHHHHHHcCCcc--cCEEEE-C--C-EEEEeeCCCCHHHHHHHHHHHhh
Confidence 8 34 9999999988999999999986 999998 3 2 34457899999999999998864
No 41
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.80 E-value=2.9e-19 Score=141.41 Aligned_cols=107 Identities=35% Similarity=0.673 Sum_probs=98.4
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
...+..++.++|+..+..++++++|+||++||++|+.+.|.+.++++.+++++.++.||++++++++++|+|.++|++++
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 100 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL 100 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEE
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 45688999999996667789999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 101 ~~~G~~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 101 FKNGEVAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EeCCEEEEEEcCCCCHHHHHHHHHHhh
Confidence 988887788999999999999998764
No 42
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.79 E-value=3.4e-19 Score=136.39 Aligned_cols=104 Identities=26% Similarity=0.535 Sum_probs=95.9
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+.+.++++++|...+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 45789999999966667889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
.+|+.+.++.|..+.+.+.+++.+
T Consensus 82 ~~G~~~~~~~G~~~~~~l~~~l~~ 105 (107)
T 2i4a_A 82 RDGKVIDKKVGALPKSQLKAWVES 105 (107)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred eCCEEEEEecCCCCHHHHHHHHHh
Confidence 888877889999999999988875
No 43
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.79 E-value=5.6e-19 Score=136.39 Aligned_cols=106 Identities=27% Similarity=0.529 Sum_probs=97.6
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
..+..+++++|...+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++.+++++++|++.++|+++++
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 45789999999867777889999999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 85 ~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 85 QGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp ETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 98887788999999999999988765
No 44
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.79 E-value=1.9e-18 Score=136.70 Aligned_cols=108 Identities=20% Similarity=0.471 Sum_probs=97.7
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc-----CCeEEEEEeCCCchhHHhhCcccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-----GKVKLGHVDCDSEKSLMSKFNVQG 232 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~l~~~~~v~~ 232 (411)
..+.+..|+.++|.+.+.+.+++++|.||++||++|+.+.|.|.++++.+. +.+.|+.|||+.+..++++|+|.+
T Consensus 13 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~ 92 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSG 92 (127)
T ss_dssp CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCS
T ss_pred CCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCcc
Confidence 467899999999999877778899999999999999999999999998764 469999999999999999999999
Q ss_pred ccEEEEEcCCCCC-cccccCCCCHHHHHHHHHHH
Q 015217 233 FPTILVFGADKDS-PIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 233 ~P~i~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~ 265 (411)
+|++++|++++.. +..|.|..+.+.|.+|+.++
T Consensus 93 ~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 93 FPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp SSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999999877643 37899999999999999875
No 45
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.79 E-value=3.6e-19 Score=135.97 Aligned_cols=102 Identities=34% Similarity=0.592 Sum_probs=94.6
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
..+.++++++|++.+ ++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++
T Consensus 3 ~~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 3die_A 3 MAIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF 80 (106)
T ss_dssp CCCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred cceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEE
Confidence 467899999999544 899999999999999999999999999999998899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
++|+.+.++.|..+.+.+.+++.+
T Consensus 81 ~~G~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 3die_A 81 KDGQPVDKVVGFQPKENLAEVLDK 104 (106)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHT
T ss_pred eCCeEEEEEeCCCCHHHHHHHHHH
Confidence 988888899999999999988865
No 46
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.79 E-value=7.8e-19 Score=136.20 Aligned_cols=107 Identities=26% Similarity=0.501 Sum_probs=98.5
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
+..+.+++.++|...+..++++++|.||++||++|+.+.|.++++++.+++++.++.+|++.+++++++|+|.++|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 35588999999996666788999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 86 ~~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 86 VKGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EcCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 988887778999999999999998775
No 47
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.79 E-value=4.7e-19 Score=138.44 Aligned_cols=108 Identities=29% Similarity=0.533 Sum_probs=98.7
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
.+..+..+++++|.+.+..++++++|+||++||++|+.+.|.+.++++.+.+++.++.+|++++++++++|+|.++|+++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 90 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVL 90 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEE
Confidence 45668889999999777778899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|++|+.+.++.|..+.+.+.+++.+.+
T Consensus 91 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 91 AMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 9988887778999999999999987654
No 48
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.78 E-value=5.9e-19 Score=135.07 Aligned_cols=104 Identities=34% Similarity=0.575 Sum_probs=95.5
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
.+..+++++|.+.+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++.+++++++|++.++|++++++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 81 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFK 81 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEES
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEe
Confidence 46789999999666678899999999999999999999999999999888999999999999999999999999999998
Q ss_pred CCCCCcccCCCCCcchhHHHHHHH
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+|+.+.++.|..+.+.+.+++.+.
T Consensus 82 ~G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 82 GGKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SSSEEEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 888778899999999899888765
No 49
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.78 E-value=5.4e-19 Score=138.77 Aligned_cols=108 Identities=31% Similarity=0.624 Sum_probs=97.3
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
++.+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|+|.++|++++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~ 81 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKL 81 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEE
Confidence 35688999999976777889999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCcccCCC----CCcchhHHHHHHHHH
Q 015217 109 FVPGKPPVDYQGA----RDVKPIAEFALQQIK 136 (411)
Q Consensus 109 ~~~g~~~~~~~g~----~~~~~l~~~~~~~~~ 136 (411)
|.+|+.+.++.|. .+.+.+.+++.+.++
T Consensus 82 ~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 82 YQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred EeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 9877667777776 789999999988763
No 50
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.78 E-value=2.2e-19 Score=140.94 Aligned_cols=104 Identities=11% Similarity=0.084 Sum_probs=97.4
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPW--CGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~--C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
.+..+++++|++.+ .++++++|+||++| |++|+.+.|.++++++.+.++ +.|++||.|++++++.+|||.++||++
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 57799999999665 57889999999999 999999999999999999999 999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|++|+.+.+..|..+.+.+.+++.+.+
T Consensus 97 lFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 97 VFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 9999999999999999999999998776
No 51
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.78 E-value=5.1e-19 Score=134.91 Aligned_cols=102 Identities=29% Similarity=0.607 Sum_probs=93.7
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~ 111 (411)
+.++++++|+ .+..++++++|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++|++.++|+++++.+
T Consensus 2 v~~l~~~~~~-~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQ-QAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHH-HHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHH-HHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 6789999999 777888999999999999999999999999999998889999999999999999999999999999988
Q ss_pred CCCCcccCCCCCcchhHHHHHHH
Q 015217 112 GKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
|+.+.++.|..+.+.+.+++.+.
T Consensus 81 G~~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 81 GRPVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp TEEEEEEESCCCHHHHHHHTTTT
T ss_pred CeEEEEEecCCCHHHHHHHHHHH
Confidence 88778899999988888887643
No 52
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=7.8e-19 Score=141.40 Aligned_cols=107 Identities=37% Similarity=0.708 Sum_probs=97.8
Q ss_pred CCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC---eEEEEEeccccHhHHHhcCCCcc
Q 015217 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV---ATVAALDANEHQSLAQEYGIRGF 103 (411)
Q Consensus 27 ~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~---i~~~~vd~~~~~~~~~~~~i~~~ 103 (411)
.....+..++.++|+ ..+.++++++|+||++||++|+.+.|.|.++++.+.+. +.++.+|++++.+++++|+|.++
T Consensus 14 ~~~~~v~~l~~~~~~-~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~ 92 (140)
T 2dj1_A 14 KEENGVWVLNDGNFD-NFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGY 92 (140)
T ss_dssp EEETTEEECCTTTHH-HHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSS
T ss_pred CCCCCCEEcChHhHH-HHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCcc
Confidence 345678999999999 56677899999999999999999999999999998764 99999999999999999999999
Q ss_pred cEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|++++|.+|+ +.+|.|..+.+.|.+|+.+.+
T Consensus 93 Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 93 PTIKILKKGQ-AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp SEEEEEETTE-EEECCSCCCHHHHHHHHHHHH
T ss_pred CeEEEEECCc-EEEcCCCCCHHHHHHHHHHhc
Confidence 9999998888 789999999999999998876
No 53
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.78 E-value=6.9e-19 Score=135.91 Aligned_cols=103 Identities=26% Similarity=0.575 Sum_probs=94.6
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
.+++++.++|++.+ ++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|+|.++|++++|.
T Consensus 2 ~v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~ 79 (112)
T 2voc_A 2 AIVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79 (112)
T ss_dssp CCEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEE
T ss_pred CeEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEe
Confidence 36789999999554 8899999999999999999999999999999888999999999999999999999999999998
Q ss_pred CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 80 ~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 80 DGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred CCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 8887888999999999999987653
No 54
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.78 E-value=2.1e-18 Score=140.29 Aligned_cols=108 Identities=25% Similarity=0.544 Sum_probs=100.2
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
....+..++.++|+ ..+.++++++|+||++||++|+.+.|.|+++++.+.+++.++.||++++++++++|+|.++|+++
T Consensus 36 ~~~~v~~l~~~~~~-~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 36 FDGEVINATAETLD-KLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIM 114 (148)
T ss_dssp TCCCCEECCTTTHH-HHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccCCceecCHHHHH-HHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEE
Confidence 45678999999999 55588999999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
+|++|+.+.++.|..+.+.+.+|+.+.+.
T Consensus 115 ~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 115 LYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp EEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred EEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 99999888899999999999999998763
No 55
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.78 E-value=4.7e-19 Score=137.74 Aligned_cols=104 Identities=20% Similarity=0.445 Sum_probs=92.0
Q ss_pred CCCCcEEeCccchhHHHhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 28 SSSPVVQLTPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
........+.++|++ ++. ++++++|+||++||++|+.+.|.++++++.+++ +.|+.||++++++++++|+|.++|+
T Consensus 10 ~~~~~~~~t~~~f~~-~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (116)
T 3qfa_C 10 HGSVKQIESKTAFQE-ALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMPT 87 (116)
T ss_dssp --CCBCCCCHHHHHH-HHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSSE
T ss_pred CCcccCCCCHHHHHH-HHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCccccE
Confidence 345566788899995 444 799999999999999999999999999999877 9999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++|.+|+.+.++.|. +.+.+.+++.+.
T Consensus 88 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 88 FQFFKKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEESSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEeCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 9999888888889998 888999888764
No 56
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.78 E-value=9.3e-19 Score=141.15 Aligned_cols=110 Identities=25% Similarity=0.488 Sum_probs=95.1
Q ss_pred cCCCCCcEEeCccchhHHHhc-----------CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhH
Q 015217 26 YGSSSPVVQLTPNNFKSKVLN-----------ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSL 94 (411)
Q Consensus 26 ~~~~~~~~~l~~~~f~~~~~~-----------~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~ 94 (411)
...+..+..++.++|...+.. ++++++|+||++||++|+.+.|.+.++++.+++++.++.||+++++++
T Consensus 18 ~~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 97 (141)
T 3hxs_A 18 EKPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97 (141)
T ss_dssp -----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHH
T ss_pred cCCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHH
Confidence 345567899999999966654 578999999999999999999999999999998899999999999999
Q ss_pred HHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 95 AQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 95 ~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++|+|.++|++++|..++.+.++.|..+.+.+.+++.+.+
T Consensus 98 ~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 98 ARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTT
T ss_pred HHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHH
Confidence 99999999999999965555569999999999999998764
No 57
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.77 E-value=1.5e-18 Score=133.71 Aligned_cols=104 Identities=36% Similarity=0.810 Sum_probs=94.0
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC---CCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
++.+..+++++|++.+ . +++++|+||++||++|+.+.|.+.++++.+. +.+.++.+|++++++++++|+|.++|+
T Consensus 4 ~~~v~~l~~~~~~~~~-~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 81 (111)
T 3uvt_A 4 GSTVLALTENNFDDTI-A-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 81 (111)
T ss_dssp -CCSEECCTTTHHHHH-H-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCcceEcChhhHHHHh-c-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccE
Confidence 4568999999999554 4 7899999999999999999999999999875 369999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++|.+|+.+.++.|..+.+.+.+|+.+.
T Consensus 82 ~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 99999998888999999999999998764
No 58
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.77 E-value=1.1e-18 Score=133.03 Aligned_cols=103 Identities=28% Similarity=0.558 Sum_probs=94.6
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~ 111 (411)
+.+++.++|+..+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 56889999996666778999999999999999999999999999998889999999999999999999999999999998
Q ss_pred CCCCcccCCCCCcchhHHHHHHH
Q 015217 112 GKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
|+.+.++.|..+.+.+.+++.+.
T Consensus 82 g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 82 GERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp TEEEEEEEECCCHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHHHHHHHHHhh
Confidence 88778899999999999888764
No 59
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.77 E-value=4.5e-17 Score=158.00 Aligned_cols=205 Identities=22% Similarity=0.391 Sum_probs=148.0
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CeEEEEEeCCC--chhHHhhCcccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDCDS--EKSLMSKFNVQG 232 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~~~--~~~l~~~~~v~~ 232 (411)
....+..++.++|...+.+.+++++|.||++||++|+.+.|.|.++++.+.+ .+.|+.|||+. +..+|++|+|.+
T Consensus 10 ~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~ 89 (519)
T 3t58_A 10 SSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAG 89 (519)
T ss_dssp TTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCS
T ss_pred CCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcc
Confidence 3567999999999998777789999999999999999999999999999987 79999999964 789999999999
Q ss_pred ccEEEEEcCCC---CCcccccCCCCHHHHHHHHHHHhhhcCC-----CCCceEeCChhHHHHhcCC---cc--EEEe---
Q 015217 233 FPTILVFGADK---DSPIPYEGARTAGAIESFALEQLETNVA-----PPEVTELTSQDVMEEKCGS---AA--ICFY--- 296 (411)
Q Consensus 233 ~P~i~~~~~~~---~~~~~y~g~~~~~~i~~fi~~~~~~~~~-----~~~v~~l~~~~~~~~~~~~---~~--~~~~--- 296 (411)
+|++++|..+. .....+.|..+.+.|.+++.+.+..... .|.+..++..+ +..+... .. ++|.
T Consensus 90 ~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~-l~~~l~~~~~~~vallF~~~~ 168 (519)
T 3t58_A 90 FPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLND-IDGFFTRNKADYLALVFERED 168 (519)
T ss_dssp BSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHH-HTTGGGSCCCSEEEEEEECTT
T ss_pred cCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHH-HHHHhccCCCCeEEEEecCCc
Confidence 99999998632 2345667889999999999998875431 22344454433 3332222 22 2221
Q ss_pred HHHHHHHHHHhhcC-ccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCCC-ChhHHHHHHHH
Q 015217 297 LEMLLSVAEKFKRG-HYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAF-ELEHIVEFVKE 367 (411)
Q Consensus 297 ~~~~~~~a~~~~~~-~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~~-~~~~i~~fi~~ 367 (411)
......++..|... .+.+..+.. ....++++||++. +|++++++..+ +...+.... +.+.+..+|.+
T Consensus 169 s~~~~~~~ldl~~~~~v~v~~v~~-~~~~l~~kfgV~~--~Pslvl~~~nG-k~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 169 SYLGREVTLDLSQYHAVAVRRVLN-TESDLVNKFGVTD--FPSCYLLLRNG-SVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp CCHHHHHHHHTTTCTTEEEEEEET-TCHHHHHHHTCCC--SSEEEEEETTS-CEEECCCSSCSHHHHHHHHTT
T ss_pred hHHHHHHHHHhhccCCeeEEEecC-chHHHHHHcCCCC--CCeEEEEeCCC-ceeecccccccHHHHHHHHHH
Confidence 13567777777754 356655554 4578999999986 99999998654 332333222 22344455544
No 60
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.77 E-value=1.6e-18 Score=141.88 Aligned_cols=106 Identities=27% Similarity=0.580 Sum_probs=97.5
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
...+.++++++|++.+ .++++++|+||++||++|+.+.|.|+++++.+++++.|+.||++++++++++|+|.++|++++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 4557889999999544 778999999999999999999999999999999889999999999999999999999999999
Q ss_pred EeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 109 FVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 109 ~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 125 ~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 125 FHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp EETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred EeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 998987888999999999999998876
No 61
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.77 E-value=1.2e-18 Score=133.77 Aligned_cols=104 Identities=30% Similarity=0.562 Sum_probs=96.0
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
.+.+++.++|+ .+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++.+++++++|++.++|++++|.
T Consensus 2 ~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFD-ETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHH-HHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 47789999999 67778999999999999999999999999999999988999999999999999999999999999998
Q ss_pred CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|+.+.++.|..+.+.+.+++.+.+
T Consensus 81 ~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 81 DGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred CCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 8887778999999999999987654
No 62
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=4e-18 Score=135.87 Aligned_cols=124 Identities=48% Similarity=0.917 Sum_probs=110.2
Q ss_pred CCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc----CCeEEEEEeCCCchhHHhhCcccc
Q 015217 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK----GKVKLGHVDCDSEKSLMSKFNVQG 232 (411)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~----~~~~f~~v~~~~~~~l~~~~~v~~ 232 (411)
+....+..++..+|.+.+.+.+++++|.||++||++|+.+.+.|.++++.+. +++.|+.||++.+..++++|+|..
T Consensus 4 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~ 83 (133)
T 1x5d_A 4 GSSGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRG 83 (133)
T ss_dssp SSCCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCS
T ss_pred CCCCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCe
Confidence 3567799999999999877778899999999999999999999999999998 789999999999999999999999
Q ss_pred ccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCCh
Q 015217 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQ 281 (411)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~ 281 (411)
+|++++|+++. ....|.|..+.+.+.+|+.+.+.....++.+.+++..
T Consensus 84 ~Pt~~~~~~g~-~~~~~~G~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 131 (133)
T 1x5d_A 84 FPTIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFSDNAPPPELLESGPS 131 (133)
T ss_dssp SSEEEEEETTE-EEEEECSCCSHHHHHHHHHHHHHHHSCCSSCCCCCGG
T ss_pred eCeEEEEeCCC-ceEEecCCCCHHHHHHHHHHHhhccCCCccccccCCC
Confidence 99999998754 4678899999999999999999877777777666653
No 63
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.77 E-value=2.1e-18 Score=148.86 Aligned_cols=111 Identities=26% Similarity=0.692 Sum_probs=102.2
Q ss_pred ccCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCccc
Q 015217 25 LYGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (411)
Q Consensus 25 ~~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P 104 (411)
.+.....+..+++++|+. ...++++++|.||++||++|+.+.|.|.++++.+++++.++.|||++++++|++|+|.++|
T Consensus 92 ~~~~~~~v~~l~~~~f~~-~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~P 170 (210)
T 3apq_A 92 IYDDDPEIITLERREFDA-AVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYP 170 (210)
T ss_dssp TTTTCTTSEECCHHHHHH-HHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSS
T ss_pred ccCCCCceEEecHHHHHH-HHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCC
Confidence 455677889999999994 4577899999999999999999999999999999988999999999999999999999999
Q ss_pred EEEEEeCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
++++|.+|+.+.++.|..+.+.+.+|+.+.++
T Consensus 171 t~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 171 SLFIFRSGMAAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp EEEEECTTSCCEECCSCCCHHHHHHHHHHHHH
T ss_pred eEEEEECCCceeEecCCCCHHHHHHHHHHhCc
Confidence 99999989888999999999999999998873
No 64
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.76 E-value=2.7e-18 Score=130.47 Aligned_cols=102 Identities=29% Similarity=0.562 Sum_probs=93.5
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~ 111 (411)
+.+++.++|++ ...++++++|+||++||++|+.+.|.+.++++.+++ +.++.+|++++++++++|++.++|+++++.+
T Consensus 1 V~~l~~~~~~~-~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDS-FLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHH-HHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHH-HHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 46789999994 457789999999999999999999999999999987 9999999999999999999999999999988
Q ss_pred CCCCcccCCCCCcchhHHHHHHHH
Q 015217 112 GKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|+.+.++.|..+.+.+.+++.+.+
T Consensus 79 g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 79 GEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp TEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CeEhhhccCCCCHHHHHHHHHHHh
Confidence 887788999999999999998765
No 65
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.76 E-value=5.1e-18 Score=135.86 Aligned_cols=107 Identities=32% Similarity=0.592 Sum_probs=95.4
Q ss_pred CCCCcEEeCccchhHHHhc-----------CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHH
Q 015217 28 SSSPVVQLTPNNFKSKVLN-----------ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ 96 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~-----------~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~ 96 (411)
....+..+++++|.+.+.. ++++++|+||++||++|+.+.|.+.++++.+++++.++.||+++++++++
T Consensus 7 ~~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~ 86 (136)
T 2l5l_A 7 GNGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAG 86 (136)
T ss_dssp CTTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHH
T ss_pred cCCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHH
Confidence 3456889999999965543 56899999999999999999999999999998889999999999999999
Q ss_pred hcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 97 EYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 97 ~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|+|.++|++++| .+|+. .++.|..+.+.+.+++.+.+
T Consensus 87 ~~~v~~~Pt~~~~~~~G~~-~~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 87 AFGIRSIPSILFIPMEGKP-EMAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HTTCCSSCEEEEECSSSCC-EEEESCCCHHHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCcE-EEEeCCCCHHHHHHHHHHHh
Confidence 9999999999999 66665 48899999999999998775
No 66
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.76 E-value=9e-19 Score=136.89 Aligned_cols=109 Identities=42% Similarity=0.770 Sum_probs=97.4
Q ss_pred cCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC---CeEEEEEeccccHhHHHhcCCCc
Q 015217 26 YGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG---VATVAALDANEHQSLAQEYGIRG 102 (411)
Q Consensus 26 ~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~---~i~~~~vd~~~~~~~~~~~~i~~ 102 (411)
+.....+..++.++|+ .++.++++++|+||++||++|+.+.|.+.++++.+++ ++.++.+|++++++++++|++.+
T Consensus 3 ~~~~~~v~~l~~~~~~-~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~ 81 (120)
T 1mek_A 3 PEEEDHVLVLRKSNFA-EALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRG 81 (120)
T ss_dssp CCEETTEEECCTTTHH-HHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCS
T ss_pred ccCCCCcEEechhhHH-HHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCc
Confidence 4455678999999999 5667789999999999999999999999999998873 68999999999999999999999
Q ss_pred ccEEEEEeCCCCC--cccCCCCCcchhHHHHHHHH
Q 015217 103 FPTIKVFVPGKPP--VDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 103 ~P~~~~~~~g~~~--~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|++++|.+|+.+ .+|.|..+.+.+.+|+.+.+
T Consensus 82 ~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 82 YPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp SSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred ccEEEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 9999999988866 88999999999999987653
No 67
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.75 E-value=3.9e-18 Score=133.56 Aligned_cols=107 Identities=30% Similarity=0.542 Sum_probs=96.6
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
....+..++.++|...+..++++++|+||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|+|.++|+++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 35678899999999767778899999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++++|+.+.++.|..+.+.+.+++.+.
T Consensus 90 ~~~~g~~~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 90 LFKDGQPVKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp EEETTEEEEEEESCCCHHHHHHHTCSC
T ss_pred EEECCEEEEEecCCCCHHHHHHHHHHH
Confidence 999888778899999988888887643
No 68
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.75 E-value=7.4e-18 Score=138.65 Aligned_cols=107 Identities=16% Similarity=0.340 Sum_probs=92.3
Q ss_pred CCCcEEeCccchhHHHhc-CCCeEEEEEEC-------CCChhhhhhhHHHHHHHHHhC-----CCeEEEEEeccccHhHH
Q 015217 29 SSPVVQLTPNNFKSKVLN-ANGVVLVEFYA-------PWCGHCQALTPIWEKAATVLK-----GVATVAALDANEHQSLA 95 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~-~~~~~~v~f~~-------~~C~~C~~~~~~~~~~~~~~~-----~~i~~~~vd~~~~~~~~ 95 (411)
+..++.+++++|++.+.. ++.+++|+||| +||++|+.+.|.|+++++.+. +++.|++||++++++++
T Consensus 17 ~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la 96 (178)
T 3ga4_A 17 DTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLV 96 (178)
T ss_dssp TTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHH
T ss_pred cCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHH
Confidence 567899999999954433 35689999999 499999999999999999998 88999999999999999
Q ss_pred HhcCCCcccEEEEEeCCCCC------------ccc---CC-CCCcchhHHHHHHHH
Q 015217 96 QEYGIRGFPTIKVFVPGKPP------------VDY---QG-ARDVKPIAEFALQQI 135 (411)
Q Consensus 96 ~~~~i~~~P~~~~~~~g~~~------------~~~---~g-~~~~~~l~~~~~~~~ 135 (411)
++|||+++|++++|++|+.. .+| .| .++++.|.+|+.+.+
T Consensus 97 ~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t 152 (178)
T 3ga4_A 97 KDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKIL 152 (178)
T ss_dssp HHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHH
T ss_pred HHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhc
Confidence 99999999999999988642 234 24 788899999998875
No 69
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=2.6e-18 Score=137.05 Aligned_cols=108 Identities=33% Similarity=0.691 Sum_probs=95.0
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC--CCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
....+..++.++|+..+..++++++|+||++||++|+.+.|.|.++++.++ +++.++.+|++++..++++|+|.++|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 456789999999995555568999999999999999999999999999998 469999999999999999999999999
Q ss_pred EEEEeCCCCC--cccC-CCCCcchhHHHHHHHH
Q 015217 106 IKVFVPGKPP--VDYQ-GARDVKPIAEFALQQI 135 (411)
Q Consensus 106 ~~~~~~g~~~--~~~~-g~~~~~~l~~~~~~~~ 135 (411)
+++|.+|+.+ .+|. |..+.+.|.+|+.+.+
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 9999887653 3577 5689999999998775
No 70
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.75 E-value=7.6e-19 Score=133.99 Aligned_cols=97 Identities=14% Similarity=0.171 Sum_probs=77.4
Q ss_pred CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCC
Q 015217 36 TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPP 115 (411)
Q Consensus 36 ~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~ 115 (411)
+.++|+ ..+.++++++|+||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|+|.++|++++|++|+.+
T Consensus 7 ~~~~~~-~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~ 84 (105)
T 4euy_A 7 TIEELA-TYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEI 84 (105)
T ss_dssp ---CCS-SSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTEEE
T ss_pred CHHHHH-HHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEE
Confidence 456777 455788999999999999999999999999999984 699999999999999999999999999999999888
Q ss_pred cccCCCCCcchhHHHHHHH
Q 015217 116 VDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 116 ~~~~g~~~~~~l~~~~~~~ 134 (411)
.++.|..+.+.+.+++.+.
T Consensus 85 ~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 85 LRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEEESSCCHHHHHHHHHTT
T ss_pred EEEeCCcCHHHHHHHHHHh
Confidence 8999999999999988754
No 71
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.75 E-value=1.1e-17 Score=128.86 Aligned_cols=104 Identities=27% Similarity=0.467 Sum_probs=90.9
Q ss_pred CCCcEEeCccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-ccHhHHHhcCCCcccEE
Q 015217 29 SSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~P~~ 106 (411)
...+..++.++|.+.+.. ++++++|+||++||++|+.+.|.+.++++.+++ +.++.+|++ .+++++++|++.++|++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt~ 82 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPTF 82 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSEE
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeEE
Confidence 456889999999955543 688999999999999999999999999999875 899999998 78999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++.+|+.+.++.|.. .+.+.+++.+.
T Consensus 83 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 83 KILKENSVVGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp EEESSSSEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 9998888777888874 77888887764
No 72
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.75 E-value=4.4e-18 Score=130.63 Aligned_cols=102 Identities=27% Similarity=0.493 Sum_probs=90.1
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
......+.++|+ .++.++++++|+||++||++|+.+.|.++++++.+++ +.|+.+|++++++++++|+|.++|++++|
T Consensus 7 ~~~~~~~~~~f~-~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 84 (109)
T 3f3q_A 7 MVTQFKTASEFD-SAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLLF 84 (109)
T ss_dssp CCEECCSHHHHH-HHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cccCCCCHHHHH-HHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 344566778898 6677899999999999999999999999999999865 89999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++|+.+.++.|. +.+.+.+++.+.
T Consensus 85 ~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 85 KNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp ETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred ECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 988878888888 668888887654
No 73
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.75 E-value=6.4e-19 Score=138.36 Aligned_cols=105 Identities=35% Similarity=0.704 Sum_probs=90.2
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCCh--------------hhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHH
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCG--------------HCQALTPIWEKAATVLKGVATVAALDANEHQSLA 95 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~--------------~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~ 95 (411)
+.+.++++++|+..+..++++++|+||++||+ +|+.+.|.++++++.+++++.++.+|++++++++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 46889999999966778899999999999999 9999999999999999888999999999999999
Q ss_pred HhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 96 QEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 96 ~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++|+|.++|++++|.+|+.+.++.|..+.+.+.+++.+.
T Consensus 83 ~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp GGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTT
T ss_pred HHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHH
Confidence 999999999999998888788899999999998888643
No 74
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.75 E-value=3.8e-18 Score=133.66 Aligned_cols=105 Identities=38% Similarity=0.782 Sum_probs=92.6
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-----CeEEEEEeccccHhHHHhcCCCc
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-----VATVAALDANEHQSLAQEYGIRG 102 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-----~i~~~~vd~~~~~~~~~~~~i~~ 102 (411)
....+..+++++|+..+..++++++|+||++||++|+.+.|.|.++++.+++ ++.++.+||++++ +++ +|.+
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 4567899999999955457889999999999999999999999999999987 7999999999776 665 9999
Q ss_pred ccEEEEEeCCCC--CcccCCCCCcchhHHHHHHHH
Q 015217 103 FPTIKVFVPGKP--PVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 103 ~P~~~~~~~g~~--~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|++++|.+|+. ..+|.|..+.+.+.+|+.+.+
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 999999988755 788999999999999998653
No 75
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.74 E-value=6.8e-18 Score=130.23 Aligned_cols=104 Identities=21% Similarity=0.505 Sum_probs=91.3
Q ss_pred CcEEe-CccchhHHHhc-C--CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 31 PVVQL-TPNNFKSKVLN-A--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 31 ~~~~l-~~~~f~~~~~~-~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
.+..+ +.++|++.+.. + +++++|.||++||++|+.+.|.+.++++.+++++.++.+|++.+++++++|+|.++|++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46677 45788854432 3 89999999999999999999999999999987899999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++.+|+.+.++.|. +.+.+.+++.+.+
T Consensus 83 ~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 999988877788898 8888988888765
No 76
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=6.9e-18 Score=133.21 Aligned_cols=104 Identities=34% Similarity=0.574 Sum_probs=92.7
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
....+..+++++|+ .++.+ .++|+||++||++|+.+.|.+.++++.+++ ++.++.||++++++++++|+|.++|++
T Consensus 5 ~~~~v~~l~~~~f~-~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 5 SSGNVRVITDENWR-ELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCCSEEECCTTTHH-HHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCccEEecHHHHH-HHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 34678899999999 44432 499999999999999999999999999886 799999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++|.+|+ +.++.|..+.+.+.+|+.+.+
T Consensus 82 ~~~~~G~-~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 82 YHCKDGE-FRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp EEEETTE-EEECCSCCCHHHHHHHHHTCG
T ss_pred EEEeCCe-EEEeecCCCHHHHHHHHHHHh
Confidence 9998887 689999999999999988654
No 77
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=3e-17 Score=130.25 Aligned_cols=112 Identities=54% Similarity=0.993 Sum_probs=102.2
Q ss_pred CCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEE
Q 015217 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
+....+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+.+.|+.||++.+..++++|+|..+|++
T Consensus 14 ~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~ 93 (130)
T 2dml_A 14 SSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTI 93 (130)
T ss_dssp CTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEE
T ss_pred CCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEE
Confidence 34567999999999997777788999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
++|++++.....|.|..+.+.+.+|+.+.+..
T Consensus 94 ~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~~ 125 (130)
T 2dml_A 94 KIFGANKNKPEDYQGGRTGEAIVDAALSALRS 125 (130)
T ss_dssp EEESSCTTSCEECCSCCSHHHHHHHHHHHHHH
T ss_pred EEEeCCCCeEEEeecCCCHHHHHHHHHHHHhc
Confidence 99988776578899999999999999988754
No 78
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.74 E-value=1.4e-17 Score=131.03 Aligned_cols=104 Identities=20% Similarity=0.350 Sum_probs=92.9
Q ss_pred CCCcEEeCc-cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 29 SSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 29 ~~~~~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
..-+.++++ ++|++ ++.++++++|.||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++|+++
T Consensus 18 ~~mv~~l~~~~~f~~-~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 18 YPSVVDVYSVEQFRN-IMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp CSCCEEECCHHHHHH-HHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccceEECCCHHHHHH-HHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 334889999 99994 55889999999999999999999999999999985 5999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|.+|+.+.++.| .+.+.+.+++.+.+
T Consensus 96 i~~~G~~~~~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 96 IARSGKMLGHVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp EEETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred EEeCCeEEEEEeC-CCHHHHHHHHHHHh
Confidence 9998887778888 68888888888765
No 79
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.74 E-value=7e-18 Score=146.84 Aligned_cols=110 Identities=35% Similarity=0.672 Sum_probs=101.5
Q ss_pred cCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 26 YGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 26 ~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
......+..+++++|++.++.++++++|+||++||++|+.+.|.|.++++.+++++.++.||+++++.++++|+|.++|+
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 34567788999999997678889999999999999999999999999999999889999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++++++|+.+.++.|..+.+.+.+++.+.+
T Consensus 88 ~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 88 LLLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp EEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 999999988889999999999999998775
No 80
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.74 E-value=8.6e-18 Score=136.45 Aligned_cols=104 Identities=15% Similarity=0.243 Sum_probs=93.3
Q ss_pred eCccchhHHHh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCC
Q 015217 35 LTPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGK 113 (411)
Q Consensus 35 l~~~~f~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~ 113 (411)
.+.++|+..+. .++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++|+++++.+|+
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 45678885555 67899999999999999999999999999999888999999999999999999999999999999998
Q ss_pred CC---------cccCC-CCCcchhHHHHHHHHHHH
Q 015217 114 PP---------VDYQG-ARDVKPIAEFALQQIKAL 138 (411)
Q Consensus 114 ~~---------~~~~g-~~~~~~l~~~~~~~~~~~ 138 (411)
.+ .++.| ..+.+.+.+++.+.++..
T Consensus 89 ~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~~~ 123 (149)
T 3gix_A 89 HMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYRGA 123 (149)
T ss_dssp EEEEECSSSCCSCEESCCSSHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCCCCeEeeecCCHHHHHHHHHHHHHHh
Confidence 77 78889 889999999998877554
No 81
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.74 E-value=1.3e-17 Score=127.54 Aligned_cols=102 Identities=22% Similarity=0.345 Sum_probs=86.8
Q ss_pred cEEe-CccchhHHHh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 32 VVQL-TPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 32 ~~~l-~~~~f~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+..+ +.++|++.+. .++++++|+||++||++|+.+.|.++++++.+ +++.++.+|++++++++++|++.++|++++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 4555 5578885444 47899999999999999999999999999998 4699999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+|+.+.++.|... +.+.+++.+.+
T Consensus 82 ~~G~~~~~~~G~~~-~~l~~~l~~~l 106 (107)
T 1gh2_A 82 RNKVRIDQYQGADA-VGLEEKIKQHL 106 (107)
T ss_dssp ETTEEEEEEESSCH-HHHHHHHHHHH
T ss_pred ECCeEEEEEeCCCH-HHHHHHHHHhc
Confidence 99987778888544 55888877653
No 82
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.74 E-value=1.2e-17 Score=131.00 Aligned_cols=104 Identities=18% Similarity=0.416 Sum_probs=93.1
Q ss_pred CCcEEeCccchhHHHhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 30 SPVVQLTPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
..+..++.++|+..+.. ++++++|+||++||++|+.+.|.|.++++.+++ +.++.+|++++++++++|+|.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~ 91 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMPTF 91 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCcccEE
Confidence 44667788999966654 689999999999999999999999999999887 99999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++.+|+.+.++.|.. .+.+.+++.+.+
T Consensus 92 ~~~~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 92 LFMKEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp EEEETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 9999888778899988 888999988765
No 83
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.74 E-value=2.4e-17 Score=126.83 Aligned_cols=109 Identities=23% Similarity=0.410 Sum_probs=98.8
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
....+..++.++|.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|+|.++|+++
T Consensus 2 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 81 (111)
T 3gnj_A 2 NAMSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQIL 81 (111)
T ss_dssp CCCCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEE
T ss_pred CCCcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEE
Confidence 34678999999999987677899999999999999999999999999999988999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|. ...++.|..+.+.+.+|+.+.+.
T Consensus 82 ~~~~g~-~~~~~~g~~~~~~l~~~l~~~l~ 110 (111)
T 3gnj_A 82 YFKDGE-YKGKMAGDVEDDEVEQMIADVLE 110 (111)
T ss_dssp EEETTE-EEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEECCE-EEEEEeccCCHHHHHHHHHHHhc
Confidence 997654 35678999999999999988753
No 84
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=9.7e-18 Score=127.94 Aligned_cols=101 Identities=23% Similarity=0.528 Sum_probs=89.1
Q ss_pred cEEeCc-cchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 32 VVQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+.++++ ++|+..+.. ++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 788854443 789999999999999999999999999999987899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
.+|+.+.++.| .+.+.+.+++.+
T Consensus 82 ~~G~~~~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 82 KNGVKVEEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp ETTEEEEEEES-CCHHHHHHHHHH
T ss_pred cCCcEEEEEcC-CCHHHHHHHHHH
Confidence 98887788888 677888887765
No 85
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.73 E-value=5.2e-18 Score=134.30 Aligned_cols=98 Identities=17% Similarity=0.297 Sum_probs=88.0
Q ss_pred eCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCC
Q 015217 35 LTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 35 l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
++.+.+. ....++++++|+||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++|+++++++|+.
T Consensus 30 ~~~~~~~-~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~ 108 (128)
T 3ul3_B 30 NGSNIIN-GVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTM 108 (128)
T ss_dssp CCCSSSS-BTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEE
T ss_pred CCccHHH-HHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEE
Confidence 3434444 566789999999999999999999999999999998889999999999999999999999999999998888
Q ss_pred CcccCCCCCcchhHHHHHH
Q 015217 115 PVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 115 ~~~~~g~~~~~~l~~~~~~ 133 (411)
+.++.|..+.+.+.+++.+
T Consensus 109 ~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 109 LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEESSCCCHHHHHHHHTT
T ss_pred EEEecCCCCHHHHHHHHHh
Confidence 8899999999999988753
No 86
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.73 E-value=1.6e-17 Score=128.12 Aligned_cols=104 Identities=16% Similarity=0.347 Sum_probs=86.5
Q ss_pred cEEeCc-cchhHHHh--cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC-CCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 32 VVQLTP-NNFKSKVL--NANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
+..+++ ++|++.+. .++++++|.||++||++|+.+.|.+.++++.+. +++.++.+|++++++++++|+|.++|+++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 567887 88984443 238899999999999999999999999999853 46999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
+|.+|+.+.++.|.. .+.+.+++.+.+.
T Consensus 82 ~~~~G~~~~~~~G~~-~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGTILKELSGAD-PKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTEEEEEECSCC-HHHHHHHHHHHHH
T ss_pred EEECCEEEEEecCCC-HHHHHHHHHHHHh
Confidence 999888778888874 4568888877653
No 87
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.73 E-value=1.2e-17 Score=136.49 Aligned_cols=126 Identities=18% Similarity=0.333 Sum_probs=94.7
Q ss_pred CCCcEEeC-ccchhHHHhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 29 SSPVVQLT-PNNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 29 ~~~~~~l~-~~~f~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
...+..++ .++|+ .++.+ +++++|+||++||++|+.+.|.|.++++.++ ++.|+.||++++++++++|+|.++|+
T Consensus 11 ~~~v~~l~~~~~~~-~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 11 VAAVEEVGSAGQFE-ELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp -CCSEEECSHHHHH-HHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred cCCeEEcCCHHHHH-HHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 45678887 47888 44444 8999999999999999999999999999874 69999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDEL 173 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 173 (411)
+++|.+|+.+.++.|. +.+.+.+++.+.+.. . ....+..+..++..+|.+.
T Consensus 89 ~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~--------~--------~~~~~~~~~~l~~~~f~~~ 139 (153)
T 2wz9_A 89 FLFFKNSQKIDRLDGA-HAPELTKKVQRHASS--------G--------SFLPSAKVKVDTDPNSSSV 139 (153)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHHSCT--------T--------SSCSCCCCCCC--------
T ss_pred EEEEECCEEEEEEeCC-CHHHHHHHHHHHhcc--------c--------cCCCccccccCCCCChhhH
Confidence 9999988777778884 667788888766411 0 1123455677788887774
No 88
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=2.6e-18 Score=137.79 Aligned_cols=107 Identities=17% Similarity=0.354 Sum_probs=95.0
Q ss_pred CCCCcEEeCccchhHHHhcCC-CeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccccHhHHHhcCCC----
Q 015217 28 SSSPVVQLTPNNFKSKVLNAN-GVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQSLAQEYGIR---- 101 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~-~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~~~~~~~~~i~---- 101 (411)
.+..+..++.++|++.+.... ++++|+||++||++|+.+.|.|+++++.+++ ++.++.||++++++++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 356688999999996654433 4999999999999999999999999999986 7999999999999999999999
Q ss_pred --cccEEEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 102 --GFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 102 --~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++|++++|.+|+.+.++.|..+.+.+.+|+.+.
T Consensus 85 ~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 85 TKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp SSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred cCCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 999999999898888899999999988888543
No 89
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.73 E-value=6.8e-18 Score=130.27 Aligned_cols=104 Identities=21% Similarity=0.505 Sum_probs=92.0
Q ss_pred CCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 28 SSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
.++....++.++|+ .++.++++++|+||++||++|+.+.|.+.++++.+++ +.++.+|++++++++++|+|.++|+++
T Consensus 7 ~~~~~~~~~~~~f~-~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~~~~~~~~~~~v~~~Pt~~ 84 (112)
T 1syr_A 7 HHMVKIVTSQAEFD-SIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVDEVSEVTEKENITSMPTFK 84 (112)
T ss_dssp --CCEEECSHHHHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTTHHHHHHTTCCSSSEEE
T ss_pred ceeEEEECCHHHHH-HHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 34567789999999 5567899999999999999999999999999999874 999999999999999999999999999
Q ss_pred EEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 108 VFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 108 ~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++.+|+.+.++.|. +.+.+.+++.+.
T Consensus 85 ~~~~G~~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 85 VYKNGSSVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEETTEEEEEEESC-CHHHHHHHHHTT
T ss_pred EEECCcEEEEEeCC-CHHHHHHHHHHh
Confidence 99988877788998 888888888653
No 90
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.72 E-value=1.3e-17 Score=131.16 Aligned_cols=105 Identities=28% Similarity=0.493 Sum_probs=91.5
Q ss_pred CCCCcEEeCccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-ccHhHHHhcCCCcccE
Q 015217 28 SSSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPT 105 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~P~ 105 (411)
....+..++.++|.+.+.. ++++++|.||++||++|+.+.|.++++++.+++ +.++.+|++ ++++++++|+|.++|+
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 4567889999999955543 688999999999999999999999999999875 899999998 6899999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++++++|+.+.++.|.. .+.+.+++.+.
T Consensus 95 ~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 99999998777888875 77788877654
No 91
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.72 E-value=1.5e-17 Score=133.87 Aligned_cols=105 Identities=33% Similarity=0.612 Sum_probs=82.8
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
..+.+++.++|...+...++ ++|+||++||++|+.+.|.|+++++.+++++.|+.||++.++.++++|++.++|++++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 56788999999955555555 99999999999999999999999999988899999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+|+.+.++.|..+.+.+.+|+.+.+
T Consensus 112 ~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 112 RRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp ETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 98887788999999999999998775
No 92
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.72 E-value=3.9e-17 Score=123.88 Aligned_cols=101 Identities=19% Similarity=0.450 Sum_probs=86.1
Q ss_pred cEEeC-ccchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 162 SIELN-SSNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 162 v~~l~-~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
|.+++ .++|.+.+.+. +++++|.||++||++|+.+.|.|.++++.+. ++.|+.||++.+++++++|+|.++||+++|
T Consensus 2 V~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 2 VYQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVDECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CEECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCBSSEEEEE
T ss_pred eEEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecccCHHHHHHcCCCeecEEEEE
Confidence 34554 46788877554 6799999999999999999999999999886 589999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++|.. ..++.| .+.+.|.+||.+|
T Consensus 81 ~~G~~-v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 81 KNGQK-LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp ETTEE-EEEEES-CCHHHHHHHHHHH
T ss_pred ECCEE-EEEEeC-cCHHHHHHHHHhc
Confidence 87653 566777 5889999999875
No 93
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.72 E-value=2.3e-17 Score=125.59 Aligned_cols=96 Identities=22% Similarity=0.545 Sum_probs=86.0
Q ss_pred CccchhHHHhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCC
Q 015217 36 TPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGK 113 (411)
Q Consensus 36 ~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~ 113 (411)
+.++|+ ..+. ++++++|+||++||++|+.+.|.++++++.+++ +.++.+|++++++++++|++.++|++++|.+|+
T Consensus 7 ~~~~~~-~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~ 84 (105)
T 3m9j_A 7 SKTAFQ-EALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQ 84 (105)
T ss_dssp SHHHHH-HHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTE
T ss_pred CHHHHH-HHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCe
Confidence 446677 4444 689999999999999999999999999999876 999999999999999999999999999999898
Q ss_pred CCcccCCCCCcchhHHHHHHH
Q 015217 114 PPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 114 ~~~~~~g~~~~~~l~~~~~~~ 134 (411)
.+.++.|. +.+.+.+++.+.
T Consensus 85 ~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 85 KVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEeCC-CHHHHHHHHHHh
Confidence 88889998 888999888764
No 94
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.72 E-value=1.3e-17 Score=128.98 Aligned_cols=101 Identities=21% Similarity=0.387 Sum_probs=87.6
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
..+..+++.++-+.++.++++++|.||++||++|+.+.|.+.++++.+++ +.++.+|++++++++++|+|.++|+++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEEEE
Confidence 44556666444436777899999999999999999999999999999877 99999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
.+|+.+.++.|.. .+.+.+++.
T Consensus 91 ~~G~~~~~~~G~~-~~~l~~~l~ 112 (114)
T 2oe3_A 91 KDGQLIGKIIGAN-PTALEKGIK 112 (114)
T ss_dssp ETTEEEEEEESSC-HHHHHHHHH
T ss_pred eCCeEEEEEeCCC-HHHHHHHHH
Confidence 9888777888988 777877775
No 95
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.72 E-value=9.9e-17 Score=131.95 Aligned_cols=111 Identities=16% Similarity=0.266 Sum_probs=96.3
Q ss_pred CCCCcEEeCccchHHHHhcC-CCeEEEEEeC-------CCChhhhhhhHHHHHHHHHhc-----CCeEEEEEeCCCchhH
Q 015217 158 DSNESIELNSSNFDELVLKS-KDLWIVEFFA-------PWCGHCKKLAPEWKKAANNLK-----GKVKLGHVDCDSEKSL 224 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~-------~~c~~c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~l 224 (411)
....++.+++.+|.+.+... +.+++|.|++ .||++|+.+.|.|+++|+.+. +++.|+.||++.++.+
T Consensus 16 ~~~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~l 95 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQL 95 (178)
T ss_dssp CTTSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHH
T ss_pred ccCCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHH
Confidence 35679999999999976443 4589999999 499999999999999999998 8899999999999999
Q ss_pred HhhCccccccEEEEEcCCCCCc-----------ccc---cC-CCCHHHHHHHHHHHhhh
Q 015217 225 MSKFNVQGFPTILVFGADKDSP-----------IPY---EG-ARTAGAIESFALEQLET 268 (411)
Q Consensus 225 ~~~~~v~~~P~i~~~~~~~~~~-----------~~y---~g-~~~~~~i~~fi~~~~~~ 268 (411)
+++|||+++|++++|++|.... ..| .| ..+++.|.+||.+++..
T Consensus 96 a~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~ 154 (178)
T 3ga4_A 96 VKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNI 154 (178)
T ss_dssp HHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCC
Confidence 9999999999999998876433 445 35 78999999999998863
No 96
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=2.1e-17 Score=149.83 Aligned_cols=106 Identities=29% Similarity=0.521 Sum_probs=97.0
Q ss_pred CCCcEEeCccchhHHHhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 29 SSPVVQLTPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
...+.+++.++|++ ++. ++++++|+||++||++|+.+.|.++++++.+++++.|+.|||+++++++++|+|.++||+
T Consensus 6 ~~~v~~~~~~~f~~-~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 6 VENIVNINESNLQQ-VLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp CTTEEECCTTTHHH-HHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCccEECCHHHHHH-HHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 45688999999995 544 388999999999999999999999999999998899999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++|.+|+.+.++.|..+.+.+.+++.+.+
T Consensus 85 ~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 99999988888999999999999998764
No 97
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=2.6e-17 Score=128.02 Aligned_cols=100 Identities=22% Similarity=0.531 Sum_probs=88.1
Q ss_pred cEEeCc-cchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 32 VVQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+.++++ ++|...+.. ++++++|.||++||++|+.+.|.+.++++.+ ++.++.+|++++++++++|+|.++|+++++
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEEE
Confidence 778888 888854433 7899999999999999999999999999887 689999999999999999999999999999
Q ss_pred eCCCCCcccCCCCCcchhHHHHHHH
Q 015217 110 VPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 110 ~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++|+.+.++.| .+.+.+.+++.+.
T Consensus 93 ~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred eCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 98887778888 5777888887654
No 98
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.71 E-value=9.3e-17 Score=122.92 Aligned_cols=106 Identities=30% Similarity=0.630 Sum_probs=95.5
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
..+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|++++|
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 81 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEE
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEE
Confidence 45889999999987777788999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|. ...++.|..+.+.+.+|+.+.+
T Consensus 82 ~~G~-~~~~~~G~~~~~~l~~~l~~~l 107 (108)
T 2trx_A 82 KNGE-VAATKVGALSKGQLKEFLDANL 107 (108)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCE-EEEEEecCCCHHHHHHHHHHhh
Confidence 6544 3567889999999999998764
No 99
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.71 E-value=5.5e-17 Score=127.49 Aligned_cols=105 Identities=22% Similarity=0.452 Sum_probs=90.5
Q ss_pred CCCCcEEe-CccchhHHHhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcc
Q 015217 28 SSSPVVQL-TPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGF 103 (411)
Q Consensus 28 ~~~~~~~l-~~~~f~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~ 103 (411)
....+..+ +.++|+..+.. ++++++|+||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|+|.++
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 44557777 56788855543 58999999999999999999999999999987 699999999999999999999999
Q ss_pred cEEEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 104 PTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 104 P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
|+++++.+|+.+.++.| .+.+.+.+++.+.
T Consensus 93 Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 93 PTFMFLKEGKILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEEeC-CCHHHHHHHHHHh
Confidence 99999998887778888 4778888887764
No 100
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.71 E-value=4.4e-17 Score=123.74 Aligned_cols=100 Identities=21% Similarity=0.479 Sum_probs=87.1
Q ss_pred EEeCc-cchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 33 VQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 33 ~~l~~-~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
..+++ ++|++.+.. ++++++|.||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|++.++|+++++.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 45666 788854433 78899999999999999999999999999987 6999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCcchhHHHHHHH
Q 015217 111 PGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 111 ~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+|+.+.++.| .+.+.+.+++.+.
T Consensus 81 ~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 81 DGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp TTEEEEEEES-SCHHHHHHHHHHH
T ss_pred CCcEEEEEeC-CCHHHHHHHHHhh
Confidence 8887778888 5888888888654
No 101
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.70 E-value=4.2e-17 Score=131.26 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=86.0
Q ss_pred CccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCC
Q 015217 36 TPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 36 ~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
+.++|+..+.. ++++++|.||++||++|+.+.|.++++++.+++++.++.||++++++++++|+|.++|++++|.+|+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 45778855554 68999999999999999999999999999998889999999999999999999999999999998876
Q ss_pred Cc---------ccCCCCC-cchhHHHHHHHHHH
Q 015217 115 PV---------DYQGARD-VKPIAEFALQQIKA 137 (411)
Q Consensus 115 ~~---------~~~g~~~-~~~l~~~~~~~~~~ 137 (411)
+. +..|..+ .+.+.+++.+.++.
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 43 3455554 67788888776643
No 102
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.70 E-value=5.6e-17 Score=126.79 Aligned_cols=107 Identities=16% Similarity=0.214 Sum_probs=96.3
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCC--hhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWC--GHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c--~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
.....+++.+|.+.+....++++|.||++|| ++|+.+.|++.++++.|.+++.|+.||.+.++.++.+|||.++||++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLA 94 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEE
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 4577999999999876666699999999999 99999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|.. ..+..|..+...+.+++.+++.
T Consensus 95 lFkdG~~-v~~~vG~~~k~~l~~~l~~~l~ 123 (137)
T 2qsi_A 95 VVQPERT-LGVIAKIQDWSSYLAQIGAMLA 123 (137)
T ss_dssp EEECCEE-EEEEESCCCHHHHHHHHHHHHH
T ss_pred EEECCEE-EEEEeCCCCHHHHHHHHHHHhc
Confidence 9998764 6777899999999999988763
No 103
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.70 E-value=5.8e-17 Score=126.44 Aligned_cols=111 Identities=26% Similarity=0.499 Sum_probs=99.0
Q ss_pred CCCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccccc
Q 015217 155 SKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 155 ~~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
+.+.++.+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+..++++|+|..+|
T Consensus 8 ~~~~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~P 87 (119)
T 1w4v_A 8 HHHGSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVP 87 (119)
T ss_dssp --CCCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSS
T ss_pred ccCCceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCccc
Confidence 45678999999999999987777889999999999999999999999999999888999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++++|++|. ...++.|..+.+.+.+|+.+.+
T Consensus 88 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 88 TVLAMKNGD-VVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp EEEEEETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEEeCCc-EEEEEcCCCCHHHHHHHHHHHh
Confidence 999996544 3567889889999999998764
No 104
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.70 E-value=1.1e-16 Score=123.48 Aligned_cols=105 Identities=22% Similarity=0.464 Sum_probs=91.1
Q ss_pred CCCcEEe-CccchhHHHhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCccc
Q 015217 29 SSPVVQL-TPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (411)
Q Consensus 29 ~~~~~~l-~~~~f~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P 104 (411)
+..+..+ +.++|++.+.. ++++++|.||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|++.++|
T Consensus 3 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 81 (113)
T 1ti3_A 3 EGQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMP 81 (113)
T ss_dssp CCCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTT
T ss_pred CCceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCccc
Confidence 3456777 55788855543 58899999999999999999999999999986 6999999999999999999999999
Q ss_pred EEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++++.+|+.+.++.| .+.+.+.+++.+.+
T Consensus 82 t~~~~~~G~~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 82 TFIFLKDGKLVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEEETTEEEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEEeCCEEEEEEec-CCHHHHHHHHHHhh
Confidence 9999998887778888 68889999998765
No 105
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.70 E-value=2.9e-17 Score=127.97 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=86.4
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEe----ccccHhHHHhcCCCcccE
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD----ANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd----~~~~~~~~~~~~i~~~P~ 105 (411)
..+..++.++|. ..+.++++++|+||++||++|+.+.|.+.++++.++..+.++.++ ++..+.++++|+|.++|+
T Consensus 12 ~~~~~~~~~~~~-~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt 90 (118)
T 1zma_A 12 KDLEVTTVVRAQ-EALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPG 90 (118)
T ss_dssp TTSEECCHHHHH-HHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCE
T ss_pred hhhhcCCHHHHH-HHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCe
Confidence 457788999999 455678899999999999999999999999999887667666333 234468999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
+++|.+|+.+.++.|..+.+.|.+|+.
T Consensus 91 ~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 91 FVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred EEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 999998887889999999998888874
No 106
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.69 E-value=1.3e-16 Score=122.98 Aligned_cols=103 Identities=23% Similarity=0.484 Sum_probs=93.7
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++.++|.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.+..++++|+|.++|++++|++
T Consensus 3 v~~l~~~~~~~~~--~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 80 (112)
T 2voc_A 3 IVKATDQSFSAET--SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKD 80 (112)
T ss_dssp CEECCTTTHHHHH--SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEET
T ss_pred eEEecHHHHHHHh--CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeC
Confidence 6789999999976 77899999999999999999999999999998889999999999999999999999999999965
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
| +...++.|..+.+.+.+|+.+++.
T Consensus 81 G-~~~~~~~G~~~~~~l~~~l~~~~~ 105 (112)
T 2voc_A 81 G-EVVETSVGFKPKEALQELVNKHLL 105 (112)
T ss_dssp T-EEEEEEESCCCHHHHHHHHHTTSC
T ss_pred C-EEEEEEeCCCCHHHHHHHHHHHHH
Confidence 4 346678999999999999988764
No 107
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.69 E-value=3e-17 Score=131.56 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=80.6
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCC--ChhhhhhhHHHHHHHHHhCCCeE--EEEEeccccHhHHHhcCCCcccEE
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPW--CGHCQALTPIWEKAATVLKGVAT--VAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~--C~~C~~~~~~~~~~~~~~~~~i~--~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
.+..+++++|+ ..+.+++.++|+|+++| |++|+.+.|.|+++++.+ +++. +++||++++++++++|+|.++|++
T Consensus 18 ~~~~l~~~~f~-~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVD-DWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHH-HHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 57899999999 45566677889999887 999999999999999999 7788 999999999999999999999999
Q ss_pred EEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++|++|+.+.++.|..+.+.+.+++.+.+
T Consensus 96 ~~fk~G~~v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 96 LVFTDGKLRGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp EEESCC----CEESCCCHHHHHHHHHHHH
T ss_pred EEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999988889999999999999998876
No 108
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.69 E-value=1.8e-16 Score=121.08 Aligned_cols=105 Identities=26% Similarity=0.539 Sum_probs=94.5
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+.+..++.++|.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++..+|++++|
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLV 81 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEE
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEE
Confidence 45889999999987767788999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++|. ...++.|..+.+.+.+|+.+.
T Consensus 82 ~~G~-~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 82 RDGK-VIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHHT
T ss_pred eCCE-EEEEecCCCCHHHHHHHHHhc
Confidence 6544 356788999999999998764
No 109
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.69 E-value=5e-17 Score=124.91 Aligned_cols=100 Identities=16% Similarity=0.285 Sum_probs=89.2
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~ 111 (411)
+..++.++|+ .+ .++++++|.||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|++.++|++++|.+
T Consensus 5 ~~~~~~~~f~-~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 5 RDITTEAGMA-HF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp SBCGGGCSHH-HH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred eecCCHHHHH-HH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 4567788893 44 567999999999999999999999999998876 68999999999999999999999999999998
Q ss_pred CCCCcccCCCCCcchhHHHHHHH
Q 015217 112 GKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
|+.+.++.|..+.+.|.+++.+.
T Consensus 82 G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 82 GKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp SSEEEEEESCCCHHHHHHHHHTC
T ss_pred CEEEEEEcCCCCHHHHHHHHHHH
Confidence 98888999999999999888754
No 110
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.69 E-value=6.3e-17 Score=127.65 Aligned_cols=104 Identities=13% Similarity=0.097 Sum_probs=89.0
Q ss_pred cEEeCccchh----HHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEe--ccccHhHHHhcCCCcccE
Q 015217 32 VVQLTPNNFK----SKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--ANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 32 ~~~l~~~~f~----~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd--~~~~~~~~~~~~i~~~P~ 105 (411)
+..++.++++ .....++++++|+||++||++|+.+.|.+.++++.+++++.++.|| ++.+.+++++|+|.++|+
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt 85 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPT 85 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSE
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeE
Confidence 3344444444 1334578899999999999999999999999999998889999999 999999999999999999
Q ss_pred EEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 106 IKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 106 ~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++++. +|+.+.++.|..+.+.+.+++.+.+
T Consensus 86 ~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 86 TVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp EEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred EEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 99998 7777778999999999999988764
No 111
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.69 E-value=1.7e-16 Score=127.70 Aligned_cols=109 Identities=27% Similarity=0.501 Sum_probs=96.3
Q ss_pred CCCCCcEEeCccchHHHHhc-----------CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHH
Q 015217 157 SDSNESIELNSSNFDELVLK-----------SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM 225 (411)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~ 225 (411)
.....+..++..+|...+.. .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.+..++
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPELA 98 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHH
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCCCHHHH
Confidence 45678999999999998765 4679999999999999999999999999999989999999999999999
Q ss_pred hhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|+|..+|++++|..++. ...+.|..+.+.|.+|+.+.+
T Consensus 99 ~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 99 RDFGIQSIPTIWFVPMKGE-PQVNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHTTCCSSSEEEEECSSSC-CEEEESCCCHHHHHHHHHHTT
T ss_pred HHcCCCCcCEEEEEeCCCC-EEEEeCCCCHHHHHHHHHHHH
Confidence 9999999999999966555 458999999999999998875
No 112
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.69 E-value=1.2e-16 Score=126.75 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=90.6
Q ss_pred cEEeCc-cchHHHHh-cCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 162 SIELNS-SNFDELVL-KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 162 v~~l~~-~~~~~~~~-~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+..+++ .+|.+.+. +.+++++|.||++||++|+.+.|.+.++|+++.+++.|+.||.++.++++++|+|..+||+++|
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEE
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEE
Confidence 566665 67877766 3678999999999999999999999999999998999999999999999999999999999999
Q ss_pred cCCCCCc-c-------cccCCCC-HHHHHHHHHHHhh
Q 015217 240 GADKDSP-I-------PYEGART-AGAIESFALEQLE 267 (411)
Q Consensus 240 ~~~~~~~-~-------~y~g~~~-~~~i~~fi~~~~~ 267 (411)
++|.... - +..|... .+.|.++|..++.
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 8776311 1 5778776 8889998877654
No 113
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.69 E-value=1.2e-16 Score=128.48 Aligned_cols=109 Identities=21% Similarity=0.378 Sum_probs=99.5
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
....+..++..+|.+.+...+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.++.++++|+|.++|+++
T Consensus 4 ~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 83 (140)
T 3hz4_A 4 NGSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFK 83 (140)
T ss_dssp CTTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEE
T ss_pred CCcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEE
Confidence 45679999999999777788899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|. ...++.|..+.+.+.+|+.+.+.
T Consensus 84 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 84 FFCHGR-PVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp EEETTE-EEEEEESSCCHHHHHHHHHHHHH
T ss_pred EEeCCc-EEEEEcCCCCHHHHHHHHHHHhc
Confidence 997654 35688999999999999998874
No 114
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.69 E-value=1.8e-16 Score=120.83 Aligned_cols=103 Identities=24% Similarity=0.462 Sum_probs=93.8
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
..+..++.++|.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|++++|
T Consensus 3 ~~v~~l~~~~~~~~~--~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 80 (106)
T 3die_A 3 MAIVKVTDADFDSKV--ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVF 80 (106)
T ss_dssp CCCEECCTTTHHHHS--CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEE
T ss_pred cceEECCHHHHHHHh--cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEE
Confidence 468899999999976 788999999999999999999999999999998999999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++|. ...++.|..+.+++.+++.++
T Consensus 81 ~~G~-~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 81 KDGQ-PVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHTT
T ss_pred eCCe-EEEEEeCCCCHHHHHHHHHHh
Confidence 7554 366789999999999998764
No 115
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.69 E-value=4.5e-17 Score=127.50 Aligned_cols=105 Identities=30% Similarity=0.589 Sum_probs=91.8
Q ss_pred CCCCcEEeCc-cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccHhHHHhcCCCcccE
Q 015217 28 SSSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 28 ~~~~~~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
....+..++. ++|+ .++.++++++|.||++||++|+.+.|.+.++++.+++. +.++.+|++++++++++|++.++|+
T Consensus 13 ~~~~~~~i~~~~~f~-~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 13 PRGSVQVISSYDQFK-QVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCCEEECCSHHHHH-HHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCcceEEcCCHHHHH-HHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccE
Confidence 3445566665 7888 55588899999999999999999999999999988765 9999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++|.+|+.+.++.|. +.+.+.+++.+.
T Consensus 92 ~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 92 FVFFKNGQKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeEEeeEcCC-CHHHHHHHHHHh
Confidence 9999988877888898 888888888765
No 116
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.52 E-value=1.9e-18 Score=131.82 Aligned_cols=103 Identities=34% Similarity=0.666 Sum_probs=94.0
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~ 111 (411)
+.+++.++|.+.+..++++++|.||++||++|+.+.|.+.++++.+++++.++.+|++++++++++|++.++|+++++.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN 82 (106)
Confidence 56788899986666788999999999999999999999999999998889999999999999999999999999999988
Q ss_pred CCCCcccCCCCCcchhHHHHHHH
Q 015217 112 GKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 112 g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
|+.+.++.|..+.+.+.+++.+.
T Consensus 83 g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 83 GQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 88788899999999998888754
No 117
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.69 E-value=2.3e-16 Score=122.11 Aligned_cols=108 Identities=26% Similarity=0.503 Sum_probs=97.0
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~ 238 (411)
+..+..++.++|.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++..+|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~ 85 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRL 85 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEE
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEE
Confidence 45689999999998776778899999999999999999999999999999889999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
|++|. ....+.|..+.+.+.+|+.+.+.
T Consensus 86 ~~~G~-~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 86 VKGEQ-ILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred EcCCE-EEEEecCCCCHHHHHHHHHHHhc
Confidence 96543 35678899999999999988764
No 118
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.68 E-value=9.1e-17 Score=124.16 Aligned_cols=88 Identities=19% Similarity=0.262 Sum_probs=77.4
Q ss_pred CcEEeCccchhHHHhcCCC--eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEE
Q 015217 31 PVVQLTPNNFKSKVLNANG--VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKV 108 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~--~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~ 108 (411)
.+.+++.++|.+.+...++ +++|+||++||++|+.+.|.++++++.++ ++.|++||+++. +++|+|.++||+++
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~~ 79 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIFV 79 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEEE
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEEE
Confidence 4678899999966665554 99999999999999999999999999986 489999999975 58999999999999
Q ss_pred EeCCCCCcccCCCC
Q 015217 109 FVPGKPPVDYQGAR 122 (411)
Q Consensus 109 ~~~g~~~~~~~g~~ 122 (411)
|++|+.+.++.|..
T Consensus 80 fk~G~~v~~~~G~~ 93 (118)
T 3evi_A 80 YKNGQIEAKFIGII 93 (118)
T ss_dssp EETTEEEEEEESTT
T ss_pred EECCEEEEEEeChh
Confidence 99998877777754
No 119
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.68 E-value=2.8e-17 Score=131.28 Aligned_cols=102 Identities=19% Similarity=0.294 Sum_probs=91.9
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec---------cccHhHHHhcC
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA---------NEHQSLAQEYG 99 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~---------~~~~~~~~~~~ 99 (411)
+..+..++.++|++. +.+ +++|+||++||++|+.+.|.+.++++.++ +.++.||+ +++++++++|+
T Consensus 15 ~~~v~~l~~~~~~~~-~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQL-LQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHH-HTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHH-hCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 456788999999954 444 99999999999999999999999999876 89999999 88899999999
Q ss_pred CCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 100 IRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 100 i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
|.++|+++++++|+.+.++.|..+.+.+..++.+.+
T Consensus 90 v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 90 VEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp CCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999988889999999999998888775
No 120
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.68 E-value=1e-16 Score=124.79 Aligned_cols=103 Identities=27% Similarity=0.466 Sum_probs=88.4
Q ss_pred CCcEEe--CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 30 SPVVQL--TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 30 ~~~~~l--~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
..+..+ +.++|.+.+..++++++|.||++||++|+.+.|.+.++++.+ +++.|+.||++++++++++|+|.++|+++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 346677 567888566667899999999999999999999999999998 77999999999999999999999999999
Q ss_pred EEeC----CCCCcccCCCCCcchhHHHHHHH
Q 015217 108 VFVP----GKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 108 ~~~~----g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+|++ |+.+.++.|..+. .|.+.+.++
T Consensus 82 ~~~~~~~~G~~~~~~~G~~~~-~l~~~~~~~ 111 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGADVS-RIKADIEKF 111 (118)
T ss_dssp EEEEETTEEEEEEEEESCCHH-HHHHHHHHH
T ss_pred EEeCCCCcceEEEeecCCCHH-HHHHHHHHh
Confidence 9987 7767788887654 477777655
No 121
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.68 E-value=1.7e-16 Score=124.30 Aligned_cols=107 Identities=34% Similarity=0.724 Sum_probs=96.4
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+.+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.+..++++|+|.++|++++|
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 82 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLY 82 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEE
Confidence 56899999999876777888999999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCcccccCC----CCHHHHHHHHHHHhh
Q 015217 240 GADKDSPIPYEGA----RTAGAIESFALEQLE 267 (411)
Q Consensus 240 ~~~~~~~~~y~g~----~~~~~i~~fi~~~~~ 267 (411)
+.++. ..++.|. .+.+.+.+|+.+.+.
T Consensus 83 ~~~~~-~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 83 QYERA-KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp EEEGG-GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred eCCCc-cceeeccccCcCCHHHHHHHHHHHHH
Confidence 76654 5667765 799999999998875
No 122
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=3.8e-16 Score=125.55 Aligned_cols=111 Identities=39% Similarity=0.744 Sum_probs=99.2
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC---eEEEEEeCCCchhHHhhCcccccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
....+..++..+|.+.+ ..+++++|.||++||++|+.+.+.|.++++.+.++ +.|+.||++.+..++++|+|..+|
T Consensus 15 ~~~~v~~l~~~~~~~~~-~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~P 93 (140)
T 2dj1_A 15 EENGVWVLNDGNFDNFV-ADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYP 93 (140)
T ss_dssp EETTEEECCTTTHHHHH-TTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSS
T ss_pred CCCCCEEcChHhHHHHH-hcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccC
Confidence 45678999999999864 56789999999999999999999999999999875 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCC
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLETNVA 271 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~ 271 (411)
++++|++|. ...|.|..+.+.|.+|+.+.+.....
T Consensus 94 t~~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~~~~ 128 (140)
T 2dj1_A 94 TIKILKKGQ--AVDYDGSRTQEEIVAKVREVSQPDWT 128 (140)
T ss_dssp EEEEEETTE--EEECCSCCCHHHHHHHHHHHHSSSCC
T ss_pred eEEEEECCc--EEEcCCCCCHHHHHHHHHHhcCCCCC
Confidence 999997654 77899999999999999998865433
No 123
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.68 E-value=2.1e-16 Score=124.92 Aligned_cols=106 Identities=29% Similarity=0.595 Sum_probs=95.5
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
..+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.++.++++|+|..+|++++|
T Consensus 22 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 101 (128)
T 2o8v_B 22 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLF 101 (128)
T ss_dssp CCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEE
T ss_pred cccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEE
Confidence 45899999999987777788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|. ....+.|..+.+.+.+|+.+.+
T Consensus 102 ~~G~-~~~~~~G~~~~~~l~~~l~~~l 127 (128)
T 2o8v_B 102 KNGE-VAATKVGALSKGQLKEFLDANL 127 (128)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred eCCE-EEEEEcCCCCHHHHHHHHHHhh
Confidence 6543 3567889999999999998764
No 124
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.68 E-value=1.9e-15 Score=132.97 Aligned_cols=187 Identities=18% Similarity=0.213 Sum_probs=142.5
Q ss_pred chHHHHhcCCCeEEEEEeCCC--ChhhhhhhHHHHHHHHHh---cCC--eEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 169 NFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNL---KGK--VKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 169 ~~~~~~~~~~~~~lv~f~~~~--c~~c~~~~~~~~~~a~~~---~~~--~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
++...+.+-.++++|.||++| |++|+.+.+.+.++|+.+ +++ +.|+.+|++.++.++++|||.++|++++| +
T Consensus 16 ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~ 94 (243)
T 2hls_A 16 ELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-G 94 (243)
T ss_dssp HHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-T
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-C
Confidence 444545444678899999999 999999999999999984 444 99999999999999999999999999998 3
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceEeCChhHHHHh---cCCccEE-E----------eHHHHHHHHHHh
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTELTSQDVMEEK---CGSAAIC-F----------YLEMLLSVAEKF 307 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~l~~~~~~~~~---~~~~~~~-~----------~~~~~~~~a~~~ 307 (411)
+ ..+|.|......+..|+...+......+.+ +++..+.+ .+...+. | ..+.+.++|..+
T Consensus 95 g---~~~~~G~~~~~~l~~fv~~~l~~~~~~~~l----~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~ 167 (243)
T 2hls_A 95 G---EVRWTGIPAGEEIRALVEVIMRLSEDESGL----EDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEA 167 (243)
T ss_dssp T---TEEEESCCCTTHHHHHHHHHHHHHTTCCCC----CHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHH
T ss_pred C---ceeEcCCCcHHHHHHHHHHHHhccCCCCCC----CHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHc
Confidence 3 678989888889999988766433222222 22233322 2222222 3 347888999988
Q ss_pred h--c-CccEEEEecCCCchhhHHHhCCCCCCCCeEEEeecCCCccccCCCCCChhHHHHHHHHHcc
Q 015217 308 K--R-GHYSFVWAAAGKQPDLENRVGVGGYGYPALVALNVKKGVYTPLKSAFELEHIVEFVKEAGR 370 (411)
Q Consensus 308 ~--~-~~~~f~~i~~~~~~~~~~~f~~~~~~~P~l~v~~~~~~~~~~~~~~~~~~~i~~fi~~~~~ 370 (411)
+ + ..+.+..+|...+++++.+|++.. +|++++ + ++. .|.|..+.++|.+||...+.
T Consensus 168 ~~~~~~~v~~~~vd~~~~~~~~~~~~V~~--vPt~~i-~---G~~-~~~G~~~~~~l~~~l~~~~~ 226 (243)
T 2hls_A 168 WKQGNPVILSEAVEAYENPDIADKYGVMS--VPSIAI-N---GYL-VFVGVPYEEDFLDYVKSAAE 226 (243)
T ss_dssp HHTTCCCEEEEEEETTTCHHHHHHTTCCS--SSEEEE-T---TEE-EEESCCCHHHHHHHHHHHHT
T ss_pred ccccCCcEEEEEEECccCHHHHHHcCCee--eCeEEE-C---CEE-EEeCCCCHHHHHHHHHHHhh
Confidence 4 1 349999999999999999999986 999988 3 333 38899999999999999874
No 125
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.68 E-value=3.7e-16 Score=120.38 Aligned_cols=106 Identities=24% Similarity=0.477 Sum_probs=95.5
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
..+..++..+|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+..++++|++.++|++++|
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 84 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVY 84 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEE
Confidence 45789999999987777788999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|. ...++.|..+.+.+.+++.+.+
T Consensus 85 ~~G~-~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 85 QGGE-VAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHTHHHH
T ss_pred eCCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 7554 3567889999999999998765
No 126
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.68 E-value=3.1e-16 Score=136.83 Aligned_cols=146 Identities=14% Similarity=0.214 Sum_probs=113.9
Q ss_pred CCCCCcEEeCccchhHHHhcCCCeEEEEEE--CCCChhhhhhhHHHHHHHHHhC---CCeEEEEEeccc-----cHhHHH
Q 015217 27 GSSSPVVQLTPNNFKSKVLNANGVVLVEFY--APWCGHCQALTPIWEKAATVLK---GVATVAALDANE-----HQSLAQ 96 (411)
Q Consensus 27 ~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~--~~~C~~C~~~~~~~~~~~~~~~---~~i~~~~vd~~~-----~~~~~~ 96 (411)
.....+..+++++|+. ++.++++|+|.|| ||||+ +.|.|+++++.+. +++.|+.|||++ ++++|+
T Consensus 13 ~~~~~v~~Lt~~nF~~-vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~ 87 (248)
T 2c0g_A 13 VTCTGCVDLDELSFEK-TVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGD 87 (248)
T ss_dssp --CTTCEECCTTTHHH-HHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHH
T ss_pred CCCCCcEECCHHHHHH-HHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHH
Confidence 3456688999999995 7788899999999 99998 9999999999984 479999999998 899999
Q ss_pred hcCCC--cccEEEEEeCCCC--Cccc--CCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccch
Q 015217 97 EYGIR--GFPTIKVFVPGKP--PVDY--QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNF 170 (411)
Q Consensus 97 ~~~i~--~~P~~~~~~~g~~--~~~~--~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 170 (411)
+|+|. ++||+++|. |.. +.+| .|.++.+.|.+|+.+.+. .. .+.... -..+
T Consensus 88 ~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~---------~~--------~~~~g~-----i~~~ 144 (248)
T 2c0g_A 88 RYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP---------LY--------IGRDGC-----IKEF 144 (248)
T ss_dssp HTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS---------CC--------CCCTTC-----CHHH
T ss_pred HhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc---------cc--------cCCCCc-----hHHH
Confidence 99999 999999999 872 5788 899999999999987641 00 000011 1223
Q ss_pred HHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc
Q 015217 171 DELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK 208 (411)
Q Consensus 171 ~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~ 208 (411)
..++ ..|.+.+|..|..+.+..++++..+.
T Consensus 145 d~l~--------~~f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 145 NEVL--------KNYANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp HHHH--------TTGGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHH--------HHHhcccchhHHHHHHHHHHHHHHcc
Confidence 3322 13677788888888888888887764
No 127
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.68 E-value=6.9e-16 Score=123.34 Aligned_cols=110 Identities=27% Similarity=0.495 Sum_probs=97.0
Q ss_pred CCCcEEeCccchHHHHhc-----------CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhh
Q 015217 159 SNESIELNSSNFDELVLK-----------SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSK 227 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~-----------~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~ 227 (411)
...+..++..+|.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.+..++++
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~ 87 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEKEQELAGA 87 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHH
Confidence 456889999999987654 457999999999999999999999999999998899999999999999999
Q ss_pred CccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 228 FNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
|+|..+|++++|..+++ ...+.|..+.+.|.+|+.+.+...
T Consensus 88 ~~v~~~Pt~~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~ 128 (136)
T 2l5l_A 88 FGIRSIPSILFIPMEGK-PEMAQGAMPKASFKKAIDEFLLKK 128 (136)
T ss_dssp TTCCSSCEEEEECSSSC-CEEEESCCCHHHHHHHHHHHHTSC
T ss_pred cCCCCCCEEEEECCCCc-EEEEeCCCCHHHHHHHHHHHhhcc
Confidence 99999999999944443 457899999999999999987643
No 128
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.67 E-value=1.7e-16 Score=123.18 Aligned_cols=107 Identities=22% Similarity=0.365 Sum_probs=91.7
Q ss_pred CCCCCCcEEeCccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccccc
Q 015217 156 KSDSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 156 ~~~~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
.+..+.....+.++|.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.||++.++.++++|+|..+|
T Consensus 8 ~~~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~~~~l~~~~~v~~~P 86 (116)
T 3qfa_C 8 HHHGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASECEVKSMP 86 (116)
T ss_dssp ----CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTTTHHHHHHTTCCSSS
T ss_pred ccCCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCcccc
Confidence 446677788888999997653 678999999999999999999999999999987 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++++|++|. ....+.|. +.+.|.+++.+.
T Consensus 87 t~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 87 TFQFFKKGQ-KVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEEESSSS-EEEEEESC-CHHHHHHHHHHH
T ss_pred EEEEEeCCe-EEEEEcCC-CHHHHHHHHHHh
Confidence 999996554 36678888 999999998765
No 129
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.67 E-value=2.8e-16 Score=122.87 Aligned_cols=107 Identities=32% Similarity=0.677 Sum_probs=94.1
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-----CeEEEEEeCCCchhHHhhCcccc
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-----KVKLGHVDCDSEKSLMSKFNVQG 232 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-----~~~f~~v~~~~~~~l~~~~~v~~ 232 (411)
....+..++.++|.+.+...+++++|.||++||++|+.+.+.|.++++.+.+ ++.|+.+|++.++ +++ +|..
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~ 81 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQG 81 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSS
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCc
Confidence 5677999999999986556778999999999999999999999999999987 7999999998766 555 9999
Q ss_pred ccEEEEEcCCCCC-cccccCCCCHHHHHHHHHHHhh
Q 015217 233 FPTILVFGADKDS-PIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 233 ~P~i~~~~~~~~~-~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++++|++++.. ..+|.|..+.+.|.+|+.+++.
T Consensus 82 ~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 82 FPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp SSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred CCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 9999999877553 6789999999999999988753
No 130
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.67 E-value=4.7e-17 Score=127.74 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=96.5
Q ss_pred CcEEeCccchHHHHhcCCCeEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCchhHHhhCccccccEEE
Q 015217 161 ESIELNSSNFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~--c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
.+..+++.+|.+.+ .+.++++|+||++| |++|+.+.|.+.++++.|.++ +.|+.||.+.+++++.+|||.++||++
T Consensus 18 g~~~~t~~~F~~~v-~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTli 96 (140)
T 2qgv_A 18 GWTPVSESRLDDWL-TQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATL 96 (140)
T ss_dssp TCEECCHHHHHHHH-HTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEE
T ss_pred CCccCCHHHHHHHH-hCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEE
Confidence 67899999999987 47778999999999 999999999999999999999 999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCC
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLETNVA 271 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~ 271 (411)
+|++|.. ..+..|..+...+.+++.+.+...+.
T Consensus 97 lFk~G~~-v~~~~G~~~k~~l~~~i~~~l~~~~~ 129 (140)
T 2qgv_A 97 VFTGGNY-RGVLNGIHPWAELINLMRGLVEPQQE 129 (140)
T ss_dssp EEETTEE-EEEEESCCCHHHHHHHHHHHHC----
T ss_pred EEECCEE-EEEEecCCCHHHHHHHHHHHhcCCCC
Confidence 9998764 56778989999999999988754433
No 131
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.67 E-value=3.5e-16 Score=119.44 Aligned_cols=104 Identities=30% Similarity=0.528 Sum_probs=93.5
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++..+|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.++.+|++.++.++++|++.++|++++|++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKG 82 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESS
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeC
Confidence 67899999998777778899999999999999999999999999999889999999999999999999999999999965
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHh
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|. ...++.|..+.+.+.+++.+.+
T Consensus 83 G~-~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 83 GK-KCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp SS-EEEEEESCCCHHHHHHHHHHHC
T ss_pred CE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 44 3567889999999999988753
No 132
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.67 E-value=4.3e-16 Score=119.76 Aligned_cols=104 Identities=36% Similarity=0.811 Sum_probs=93.1
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEeCCCchhHHhhCccccccE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
.+.+..++.++|.+.+. +++++|.||++||++|+.+.+.+.++++.+. ..+.|+.+|++.++.++++|+|..+|+
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt 81 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA--EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPT 81 (111)
T ss_dssp -CCSEECCTTTHHHHHH--SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSE
T ss_pred CCcceEcChhhHHHHhc--CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccE
Confidence 45789999999999765 7799999999999999999999999999876 369999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
+++|++|. ...++.|..+.+.|.+|+.++
T Consensus 82 ~~~~~~g~-~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 82 LLLFRGGK-KVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEEEETTE-EEEEECSCCSHHHHHHHHHHH
T ss_pred EEEEeCCc-EEEeccCCcCHHHHHHHHHhc
Confidence 99997664 367889999999999999875
No 133
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.67 E-value=5.4e-16 Score=118.71 Aligned_cols=106 Identities=29% Similarity=0.568 Sum_probs=95.6
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~ 238 (411)
.+.+..++.++|.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|++++
T Consensus 3 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~ 81 (109)
T 3tco_A 3 EDVTLVLTEENFDEVI-RNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLI 81 (109)
T ss_dssp CCCCEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred CCeEEEecHHHHHHHH-hcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEE
Confidence 4678999999999865 558899999999999999999999999999999899999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 239 FGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|++|. ...++.|..+.+.+.+++.+.+
T Consensus 82 ~~~g~-~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 82 FVNGQ-LVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHHHC
T ss_pred EcCCc-EEEeeeccCCHHHHHHHHHHHh
Confidence 96554 4677899999999999998764
No 134
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.67 E-value=3.2e-16 Score=125.84 Aligned_cols=106 Identities=18% Similarity=0.345 Sum_probs=91.3
Q ss_pred CCCcEEeC-ccchhHHHh---cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCccc
Q 015217 29 SSPVVQLT-PNNFKSKVL---NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFP 104 (411)
Q Consensus 29 ~~~~~~l~-~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P 104 (411)
...+..++ .++|.+.+. .++++++|+||++||++|+.+.|.+.++++.++ ++.|+.||++++++++++|+|.++|
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~P 101 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKATP 101 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEES
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCccc
Confidence 45566665 688885443 358899999999999999999999999999985 5899999999999999999999999
Q ss_pred EEEEEeCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 105 TIKVFVPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 105 ~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
+++++.+|+.+.++.|. +.+.+.+++.+.++
T Consensus 102 t~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 102 TFFFLRDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp EEEEEETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred EEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 99999888877788888 78888888887763
No 135
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.67 E-value=2.7e-16 Score=122.33 Aligned_cols=104 Identities=22% Similarity=0.481 Sum_probs=89.8
Q ss_pred CCcEEe-CccchhHHHhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 30 SPVVQL-TPNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 30 ~~~~~l-~~~~f~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
..+..+ +.++|++.+.. ++++++|.||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|++.++|+
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt 84 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMPT 84 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBSE
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCcE
Confidence 456777 46788854433 48899999999999999999999999999987 68999999999999999999999999
Q ss_pred EEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++++++|+.+.++.| .+.+.+.+++.+.+
T Consensus 85 ~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 85 FLFIKDGEKVDSVVG-GRKDDIHTKIVALM 113 (118)
T ss_dssp EEEEETTEEEEEEES-CCHHHHHHHHHHHH
T ss_pred EEEEeCCeEEEEecC-CCHHHHHHHHHHHh
Confidence 999998887778888 57888888888765
No 136
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.66 E-value=8.3e-16 Score=124.81 Aligned_cols=109 Identities=28% Similarity=0.579 Sum_probs=98.9
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
....+..++.++|.+.+ ..+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+..++++|+|.++|+++
T Consensus 36 ~~~~v~~l~~~~~~~~~-~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~ 114 (148)
T 3p2a_A 36 FDGEVINATAETLDKLL-QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIM 114 (148)
T ss_dssp TCCCCEECCTTTHHHHT-TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccCCceecCHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEE
Confidence 35679999999999976 77889999999999999999999999999999889999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
+|++|. ...+|.|..+.+.|.+|+.+.+..
T Consensus 115 ~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 115 LYRNGK-MIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp EEETTE-EEEEESSCCCHHHHHHHHHHHHHS
T ss_pred EEECCe-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 997554 356789999999999999998763
No 137
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.66 E-value=2.8e-16 Score=125.14 Aligned_cols=110 Identities=29% Similarity=0.617 Sum_probs=96.6
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEeCCCchhHHhhCccccccE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
....+..++..+|...+...+++++|.||++||++|+.+.+.|.++++.+. +.+.|+.||++.+..++++|+|..+|+
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt 84 (133)
T 2dj3_A 5 SSGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPT 84 (133)
T ss_dssp SSCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSE
T ss_pred CCCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCE
Confidence 467899999999998765567899999999999999999999999999998 469999999999999999999999999
Q ss_pred EEEEcCCCCC-ccccc-CCCCHHHHHHHHHHHhh
Q 015217 236 ILVFGADKDS-PIPYE-GARTAGAIESFALEQLE 267 (411)
Q Consensus 236 i~~~~~~~~~-~~~y~-g~~~~~~i~~fi~~~~~ 267 (411)
+++|.+++.. .+.|. |..+.+.|.+|+.+++.
T Consensus 85 ~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~ 118 (133)
T 2dj3_A 85 IYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHAT 118 (133)
T ss_dssp EEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSS
T ss_pred EEEEeCCCcccceEecCCCcCHHHHHHHHHHhcc
Confidence 9999876542 34677 55899999999999875
No 138
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.66 E-value=6.1e-16 Score=117.61 Aligned_cols=103 Identities=27% Similarity=0.552 Sum_probs=92.6
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++.++|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|+++++++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 81 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKN 81 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeC
Confidence 67889999999777778899999999999999999999999999999889999999999999999999999999999975
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
|. ....+.|..+.+.+.+++.+.
T Consensus 82 g~-~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 82 GE-RKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp TE-EEEEEEECCCHHHHHHHHHHH
T ss_pred Ce-EEEEEecCCCHHHHHHHHHhh
Confidence 54 356688989999999998765
No 139
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=7.6e-16 Score=121.36 Aligned_cols=106 Identities=28% Similarity=0.584 Sum_probs=94.2
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCchhHHhhCccccccEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
....+..++.++|.+.+ + +.++|.||++||++|+.+.+.+.++++.+.+ .+.|+.||++.+..++++|+|..+|++
T Consensus 5 ~~~~v~~l~~~~f~~~~-~--~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 81 (126)
T 1x5e_A 5 SSGNVRVITDENWRELL-E--GDWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTI 81 (126)
T ss_dssp CCCSEEECCTTTHHHHT-S--SEEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CCCccEEecHHHHHHHh-C--CCEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEE
Confidence 45679999999999854 3 2489999999999999999999999999986 799999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
++|++|. ..+|.|..+.+.+.+|+.+.+..
T Consensus 82 ~~~~~G~--~~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 82 YHCKDGE--FRRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp EEEETTE--EEECCSCCCHHHHHHHHHTCGGG
T ss_pred EEEeCCe--EEEeecCCCHHHHHHHHHHHhhc
Confidence 9996554 57899999999999999988753
No 140
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.66 E-value=5.6e-16 Score=126.64 Aligned_cols=107 Identities=25% Similarity=0.605 Sum_probs=96.2
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~ 238 (411)
...+..++..+|.+.+ ..+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.++.++++|+|..+|++++
T Consensus 46 ~~~~~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~ 124 (155)
T 2ppt_A 46 TGKVAGIDPAILARAE-RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124 (155)
T ss_dssp CSSEEECCHHHHHHHT-TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEE
T ss_pred CCCCccCCHHHHHHHH-hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEE
Confidence 4567889999999876 667899999999999999999999999999999889999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 239 FGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
|++|. ...++.|..+.+.|.+|+.+.+.
T Consensus 125 ~~~G~-~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 125 FHKGR-ELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp EETTE-EEEEEESCCCHHHHHHHHHHHHC
T ss_pred EeCCe-EEEEecCCCCHHHHHHHHHHHhc
Confidence 97554 35678899999999999998764
No 141
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.65 E-value=3.5e-16 Score=122.33 Aligned_cols=108 Identities=24% Similarity=0.482 Sum_probs=95.7
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
....+..++..+|.+.+...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|+++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~ 89 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLI 89 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEE
Confidence 45679999999999877777889999999999999999999999999999888999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+|++|. ...++.|..+.+.+.+++.+.+
T Consensus 90 ~~~~g~-~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 90 LFKDGQ-PVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp EEETTE-EEEEEESCCCHHHHHHHTCSCC
T ss_pred EEECCE-EEEEecCCCCHHHHHHHHHHHH
Confidence 997544 3567889999999999987654
No 142
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.65 E-value=6.2e-16 Score=117.63 Aligned_cols=102 Identities=23% Similarity=0.529 Sum_probs=90.5
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++.++|.+ +.+.+++++|.||++||++|+.+.+.+.++++.+.+++.++.+|++.+..++++|++.++|++++|++
T Consensus 2 v~~l~~~~~~~-~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 80 (105)
T 1nsw_A 2 TMTLTDANFQQ-AIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKG 80 (105)
T ss_dssp CEEECTTTHHH-HHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEET
T ss_pred ceeccHHhHHH-HHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeC
Confidence 67899999995 45677899999999999999999999999999998889999999999999999999999999999965
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
|. ....+.|..+.+.+.+++.+.
T Consensus 81 G~-~~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 81 GR-PVKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp TE-EEEEEESCCCHHHHHHHTTTT
T ss_pred Ce-EEEEEecCCCHHHHHHHHHHH
Confidence 43 356788999999998887654
No 143
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.65 E-value=1.3e-15 Score=131.20 Aligned_cols=108 Identities=31% Similarity=0.788 Sum_probs=98.5
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
....+..++..+|...+ ..+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.+..++++|+|.++|+++
T Consensus 95 ~~~~v~~l~~~~f~~~~-~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 173 (210)
T 3apq_A 95 DDPEIITLERREFDAAV-NSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLF 173 (210)
T ss_dssp TCTTSEECCHHHHHHHH-HHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CCCceEEecHHHHHHHH-ccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEE
Confidence 35678999999999875 66789999999999999999999999999999989999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|. ....+.|..+.+.|.+|+.+.+.
T Consensus 174 ~~~~G~-~~~~~~G~~~~~~l~~~i~~~l~ 202 (210)
T 3apq_A 174 IFRSGM-AAVKYNGDRSKESLVAFAMQHVR 202 (210)
T ss_dssp EECTTS-CCEECCSCCCHHHHHHHHHHHHH
T ss_pred EEECCC-ceeEecCCCCHHHHHHHHHHhCc
Confidence 996554 47789999999999999999886
No 144
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.65 E-value=1.2e-15 Score=132.69 Aligned_cols=121 Identities=28% Similarity=0.552 Sum_probs=105.9
Q ss_pred CCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 156 KSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 156 ~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
.+....+..++.++|.+.+.+.+++++|.||++||++|+.+.+.|.++++.+.+++.|+.||++.++.++++|+|.++|+
T Consensus 8 ~~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt 87 (222)
T 3dxb_A 8 HPMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPT 87 (222)
T ss_dssp -CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSE
T ss_pred CCCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCE
Confidence 44678899999999999777888999999999999999999999999999999899999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcCCCCCceE
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQLETNVAPPEVTE 277 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~~~~~v~~ 277 (411)
+++|++|. ...++.|..+.+.+.+|+.+.+......+.+..
T Consensus 88 ~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l~~~~~~s~v~~ 128 (222)
T 3dxb_A 88 LLLFKNGE-VAATKVGALSKGQLKEFLDANLAGSAMESTVMV 128 (222)
T ss_dssp EEEEETTE-EEEEEESCCCHHHHHHHHHHHSCCSCCBCSEEE
T ss_pred EEEEECCe-EEEEeccccChHHHHHHHHhhccccccccccch
Confidence 99998654 356889999999999999998865544444333
No 145
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=9.4e-16 Score=122.27 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=84.5
Q ss_pred CCCCcEEeCccchhHHHhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 28 SSSPVVQLTPNNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
....+.+++.++|.+.+... +++++|+||++||++|+.+.|.|+++++.+. .+.|+.||+++.. ++|+|.++|+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 34568889999999655443 3699999999999999999999999999885 5899999999875 7899999999
Q ss_pred EEEEeCCCCCcccCCCC-------CcchhHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGAR-------DVKPIAEFALQ 133 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~-------~~~~l~~~~~~ 133 (411)
+++|.+|+.+.++.|.. +.+.|.+++.+
T Consensus 84 ~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~ 118 (135)
T 2dbc_A 84 IFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSE 118 (135)
T ss_dssp EEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHH
T ss_pred EEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHH
Confidence 99999998888888875 45555555554
No 146
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.64 E-value=1.1e-15 Score=116.99 Aligned_cols=104 Identities=27% Similarity=0.547 Sum_probs=93.1
Q ss_pred CcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEc
Q 015217 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~ 240 (411)
.+..++.++|.+. .+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.++.++++|++.++|++++|+
T Consensus 2 ~v~~l~~~~~~~~-~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (109)
T 2yzu_A 2 KPIEVTDQNFDET-LGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFK 80 (109)
T ss_dssp CCEECCTTTHHHH-HHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred cceEccHhHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEe
Confidence 4788999999964 567889999999999999999999999999999988999999999999999999999999999996
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 241 ADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+|. ....+.|..+.+.+.+|+.+.+
T Consensus 81 ~g~-~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 81 DGQ-PVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp TTE-EEEEEESCCCHHHHHHHHHTTC
T ss_pred CCc-EeeeEeCCCCHHHHHHHHHHHh
Confidence 544 3557889999999999998765
No 147
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.64 E-value=1.5e-15 Score=115.10 Aligned_cols=102 Identities=28% Similarity=0.538 Sum_probs=91.6
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
|..++.++|.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.+..++++|++.++|++++|++
T Consensus 1 V~~l~~~~~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 78 (104)
T 2e0q_A 1 VIHLDSKNFDSFL-ASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78 (104)
T ss_dssp CEECCTTTHHHHH-HHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSCEEEEEET
T ss_pred CeecCHHHHHHHH-hcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECCCCHHHHHhCCccccCEEEEEEC
Confidence 4678899999976 6678999999999999999999999999999987 9999999999999999999999999999965
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHh
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|. ....+.|..+.+.+.+|+.+.+
T Consensus 79 g~-~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 79 GE-PVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp TE-EEEEEESCCCHHHHHHHHHHHH
T ss_pred Ce-EhhhccCCCCHHHHHHHHHHHh
Confidence 44 3567889999999999998875
No 148
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.64 E-value=1.6e-16 Score=150.02 Aligned_cols=107 Identities=26% Similarity=0.410 Sum_probs=90.2
Q ss_pred ccccccCCCCCcEEeCccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhC---C-----CeEEEEEecccc
Q 015217 21 LSDALYGSSSPVVQLTPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLK---G-----VATVAALDANEH 91 (411)
Q Consensus 21 ~~~~~~~~~~~~~~l~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~-----~i~~~~vd~~~~ 91 (411)
.....+.....+..++.++|+..+.. .+++++|+|||+||++|+.+.|.|+++++.+. + .+.|+.|||+++
T Consensus 14 ~~~~l~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~ 93 (470)
T 3qcp_A 14 PRPGLFHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASE 93 (470)
T ss_dssp CCCCSCTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTC
T ss_pred ccccccCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCC
Confidence 34456667788999999999944432 34799999999999999999999999999987 2 599999999999
Q ss_pred HhHHHhcCCCcccEEEEEeCCCC--CcccCCCCCcchh
Q 015217 92 QSLAQEYGIRGFPTIKVFVPGKP--PVDYQGARDVKPI 127 (411)
Q Consensus 92 ~~~~~~~~i~~~P~~~~~~~g~~--~~~~~g~~~~~~l 127 (411)
+++|++|+|.++|++++|.+|+. ..+|.|.++.+.+
T Consensus 94 ~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L 131 (470)
T 3qcp_A 94 VDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV 131 (470)
T ss_dssp HHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE
T ss_pred HHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHH
Confidence 99999999999999999975543 7789998777753
No 149
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.63 E-value=2.4e-16 Score=125.43 Aligned_cols=104 Identities=17% Similarity=0.369 Sum_probs=86.5
Q ss_pred CCCcEEeCc-cchhHHHhc-CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEE
Q 015217 29 SSPVVQLTP-NNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTI 106 (411)
Q Consensus 29 ~~~~~~l~~-~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~ 106 (411)
...+.++++ ++|...+.. ++++++|.||++||++|+.+.|.++++++.+ ++.++.+|++++++++++|+|.++|++
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~Pt~ 96 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALPTF 96 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSSEE
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCCEE
Confidence 455778876 777744332 3579999999999999999999999988776 589999999999999999999999999
Q ss_pred EEEe--CCC--CCcccCCCCCcchhHHHHHHHH
Q 015217 107 KVFV--PGK--PPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 107 ~~~~--~g~--~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++|. +|+ .+.++.|. +.+.|.+++.+.+
T Consensus 97 ~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l 128 (133)
T 3cxg_A 97 EFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYC 128 (133)
T ss_dssp EEEEEETTEEEEEEEEESC-CHHHHHHHHHHHS
T ss_pred EEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHH
Confidence 9996 776 56778887 7888888887654
No 150
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.62 E-value=2.7e-15 Score=114.17 Aligned_cols=102 Identities=23% Similarity=0.500 Sum_probs=88.8
Q ss_pred cEEeCc-cchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 162 SIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 162 v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+..+++ +++.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+..++++|++.++|++++|
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEE
Confidence 456777 788887654 678999999999999999999999999999988899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++|. ....+.| .+.+.+.+++.+.
T Consensus 82 ~~G~-~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 82 KNGV-KVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ETTE-EEEEEES-CCHHHHHHHHHHT
T ss_pred cCCc-EEEEEcC-CCHHHHHHHHHHh
Confidence 7654 3567788 7888999998764
No 151
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.62 E-value=4.2e-15 Score=113.41 Aligned_cols=102 Identities=21% Similarity=0.324 Sum_probs=85.8
Q ss_pred cEEe-CccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 162 SIEL-NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 162 v~~l-~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+..+ +.++|.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+ +++.|+.+|++.++.++++|++.++|++++|
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQCQGTAATNNISATPTFQFF 81 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECccCHHHHHhcCCCcccEEEEE
Confidence 4555 55788887653 6789999999999999999999999999999 4699999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|. ...++.| ...++|.+++.+.+
T Consensus 82 ~~G~-~~~~~~G-~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 82 RNKV-RIDQYQG-ADAVGLEEKIKQHL 106 (107)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHHH
T ss_pred ECCe-EEEEEeC-CCHHHHHHHHHHhc
Confidence 7654 3556778 45566999988764
No 152
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.62 E-value=4.4e-16 Score=122.04 Aligned_cols=106 Identities=30% Similarity=0.630 Sum_probs=88.4
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCCh--------------hhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHH
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCG--------------HCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLM 225 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~--------------~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~ 225 (411)
..+..++..+|.+.+.+.+++++|.||++||+ +|+.+.|.|.++++.+.+++.|+.+|++.++.++
T Consensus 3 ~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~ 82 (123)
T 1oaz_A 3 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 82 (123)
T ss_dssp CSCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSCTTTG
T ss_pred CccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHH
Confidence 35889999999987777888999999999999 9999999999999999888999999999999999
Q ss_pred hhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|+|.++|++++|++|. ...++.|..+.+++.+|+.+.+
T Consensus 83 ~~~~v~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 83 PKYGIRGIPTLLLFKNGE-VAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp GGGTCCBSSEEEEEESSS-EEEEEESCCCHHHHHHHHTTTC
T ss_pred HHcCCCccCEEEEEECCE-EEEEEeCCCCHHHHHHHHHHHh
Confidence 999999999999996544 3567899999999999987643
No 153
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.62 E-value=5.6e-15 Score=113.52 Aligned_cols=106 Identities=21% Similarity=0.382 Sum_probs=90.7
Q ss_pred CCCCcEEeCccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-CchhHHhhCccccccE
Q 015217 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~l~~~~~v~~~P~ 235 (411)
....+..++.++|.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++ .+..++++|++.++|+
T Consensus 3 ~~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~~~~~~~~~~v~~~Pt 81 (111)
T 2pu9_C 3 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 81 (111)
T ss_dssp CTTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSBSSE
T ss_pred CcCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcchHHHHHHcCCCeeeE
Confidence 3567999999999997754 577999999999999999999999999999875 999999998 7889999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++++++|. ...++.|. +.+.+.+++.+.+
T Consensus 82 ~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~ 110 (111)
T 2pu9_C 82 FKILKENS-VVGEVTGA-KYDKLLEAIQAAR 110 (111)
T ss_dssp EEEESSSS-EEEEEESS-CHHHHHHHHHHHH
T ss_pred EEEEeCCc-EEEEEcCC-CHHHHHHHHHHhh
Confidence 88887654 34567776 4888999987653
No 154
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.62 E-value=3.4e-15 Score=116.84 Aligned_cols=107 Identities=21% Similarity=0.356 Sum_probs=93.0
Q ss_pred CCCCcEEeCccchHHHHhc---CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccccc
Q 015217 158 DSNESIELNSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
..+.+..++.++|.+.+.. .+++++|.||++||++|+.+.+.|.++++.+.+ +.|+.||++.+..++++|++.++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~P 89 (122)
T 2vlu_A 11 AAEVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVDELKPIAEQFSVEAMP 89 (122)
T ss_dssp -CCCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSS
T ss_pred CCcceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECCCCHHHHHHcCCCccc
Confidence 3456777788999987765 578999999999999999999999999999987 999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
++++|++|. ...++.|.. .+.+.+|+.+.+.
T Consensus 90 t~~~~~~G~-~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 90 TFLFMKEGD-VKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp EEEEEETTE-EEEEEESSC-HHHHHHHHHHHHS
T ss_pred EEEEEeCCE-EEEEEeCcC-HHHHHHHHHHHhc
Confidence 999997554 356788888 8999999988763
No 155
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.62 E-value=8.9e-14 Score=123.23 Aligned_cols=204 Identities=17% Similarity=0.226 Sum_probs=159.9
Q ss_pred cEEeCc-cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEe
Q 015217 32 VVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~ 110 (411)
+..|++ ++++ .++..+++++|-|+++| |....+.|.++|..+++++.|+.+. +..++++|++.+ |++++|+
T Consensus 8 v~~l~s~~~~~-~~l~~~~v~vvgff~~~---~~~~~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk 79 (252)
T 2h8l_A 8 SVPLRTEEEFK-KFISDKDASIVGFFDDS---FSEAHSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFR 79 (252)
T ss_dssp EEECCSHHHHH-HHHTSSSCEEEEEESCT---TSHHHHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEEC
T ss_pred ceeecCHHHHH-HHhhcCCeEEEEEECCC---CChHHHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEc
Confidence 567754 4455 66777889999999998 4566789999999999889998884 577999999997 9999998
Q ss_pred CC-------CCCccc-CCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEE
Q 015217 111 PG-------KPPVDY-QGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWI 182 (411)
Q Consensus 111 ~g-------~~~~~~-~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~l 182 (411)
++ .....| .|..+.+.|.+|+... .-+.+.++|.+++... ...+.+
T Consensus 80 ~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~-----------------------~~Plv~e~t~~n~~~~---~~~~~~ 133 (252)
T 2h8l_A 80 PSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN-----------------------IFGICPHMTEDNKDLI---QGKDLL 133 (252)
T ss_dssp CGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH-----------------------SSCSSCEECTTTHHHH---SSSSEE
T ss_pred chhhcccccccccccCCCCcCHHHHHHHHHhc-----------------------ccCCeeecccccHhhh---cCCCeE
Confidence 63 235678 8999999999999877 4688999999999884 233455
Q ss_pred EEEeCCCCh---h-hhhhhHHHHHHHHHhcCC---eEEEEEeCCCchhHHhhCcc----ccccEEEEEcCCCCCcccccC
Q 015217 183 VEFFAPWCG---H-CKKLAPEWKKAANNLKGK---VKLGHVDCDSEKSLMSKFNV----QGFPTILVFGADKDSPIPYEG 251 (411)
Q Consensus 183 v~f~~~~c~---~-c~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~l~~~~~v----~~~P~i~~~~~~~~~~~~y~g 251 (411)
|.|+...+. . ...+...+.++|+.|+++ +.|+.+|++....+++.||+ ..+|+++++...+ ..+.+.+
T Consensus 134 v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~-~ky~~~~ 212 (252)
T 2h8l_A 134 IAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQE 212 (252)
T ss_dssp EEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTS-CEEECCS
T ss_pred EEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcC-cEecCCc
Confidence 666643221 1 124778899999999987 99999999988889999999 3589999985433 2455667
Q ss_pred CCCHHH--HHHHHHHHhhhcC
Q 015217 252 ARTAGA--IESFALEQLETNV 270 (411)
Q Consensus 252 ~~~~~~--i~~fi~~~~~~~~ 270 (411)
.++.+. |.+|+...+....
T Consensus 213 ~~t~~~~~i~~F~~~~~~Gkl 233 (252)
T 2h8l_A 213 EFSRDGKALERFLQDYFDGNL 233 (252)
T ss_dssp CCCTTSHHHHHHHHHHHHTCS
T ss_pred ccCcchHHHHHHHHHHHCCCc
Confidence 888888 9999999887554
No 156
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.61 E-value=5.6e-15 Score=116.03 Aligned_cols=105 Identities=24% Similarity=0.412 Sum_probs=91.7
Q ss_pred CCCcEEeCc-cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 159 SNESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 159 ~~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
...+..+++ ++|.+.+ ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.+..++++|+|..+|+++
T Consensus 18 ~~mv~~l~~~~~f~~~~-~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~Pt~~ 95 (125)
T 1r26_A 18 YPSVVDVYSVEQFRNIM-SEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDADNNSEIVSKCRVLQLPTFI 95 (125)
T ss_dssp CSCCEEECCHHHHHHHH-HSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccceEECCCHHHHHHHH-ccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECCCCHHHHHHcCCCcccEEE
Confidence 344889999 8898875 778899999999999999999999999999985 5999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|. ....+.| .+.+.|.+++.+.+.
T Consensus 96 i~~~G~-~~~~~~G-~~~~~l~~~l~~~l~ 123 (125)
T 1r26_A 96 IARSGK-MLGHVIG-ANPGMLRQKLRDIIK 123 (125)
T ss_dssp EEETTE-EEEEEES-SCHHHHHHHHHHHHH
T ss_pred EEeCCe-EEEEEeC-CCHHHHHHHHHHHhc
Confidence 997654 3556788 688999999988753
No 157
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.61 E-value=1.2e-15 Score=119.00 Aligned_cols=108 Identities=39% Similarity=0.756 Sum_probs=95.0
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC---CeEEEEEeCCCchhHHhhCccccccE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG---KVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~---~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
...+..++..+|.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.+ .+.|+.+|++.+..++++|++.++|+
T Consensus 6 ~~~v~~l~~~~~~~~~-~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt 84 (120)
T 1mek_A 6 EDHVLVLRKSNFAEAL-AAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPT 84 (120)
T ss_dssp ETTEEECCTTTHHHHH-HHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSE
T ss_pred CCCcEEechhhHHHHH-ccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccE
Confidence 4568999999999864 5678999999999999999999999999999874 59999999999999999999999999
Q ss_pred EEEEcCCCC-CcccccCCCCHHHHHHHHHHHhh
Q 015217 236 ILVFGADKD-SPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 236 i~~~~~~~~-~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+++|++|.. ....|.|..+.+.+.+|+.+++.
T Consensus 85 ~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~ 117 (120)
T 1mek_A 85 IKFFRNGDTASPKEYTAGREADDIVNWLKKRTG 117 (120)
T ss_dssp EEEEESSCSSSCEECCCCSSHHHHHHHHHTTSC
T ss_pred EEEEeCCCcCCcccccCccCHHHHHHHHHhccC
Confidence 999976553 13788999999999999987753
No 158
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.61 E-value=3.4e-15 Score=114.88 Aligned_cols=104 Identities=24% Similarity=0.472 Sum_probs=89.9
Q ss_pred CcEEe-CccchHHHHhc-C--CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEE
Q 015217 161 ESIEL-NSSNFDELVLK-S--KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 161 ~v~~l-~~~~~~~~~~~-~--~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
.+..+ +..+|.+.+.. . +++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+..++++|++.++|++
T Consensus 3 ~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 82 (112)
T 1ep7_A 3 SVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTF 82 (112)
T ss_dssp SEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEE
T ss_pred cEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEE
Confidence 46777 45778887654 2 78999999999999999999999999999988899999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|++|. ...++.|. +.+.+.+++.+.+
T Consensus 83 ~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 83 HVYKDGV-KADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp EEEETTE-EEEEEESC-CHHHHHHHHHHHH
T ss_pred EEEECCe-EEEEEcCC-CHHHHHHHHHHHh
Confidence 9997554 35678887 8999999998765
No 159
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.61 E-value=2.6e-16 Score=124.78 Aligned_cols=109 Identities=20% Similarity=0.476 Sum_probs=93.2
Q ss_pred ccCCCCCcEEeC-ccchhHHHhc---CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCC
Q 015217 25 LYGSSSPVVQLT-PNNFKSKVLN---ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGI 100 (411)
Q Consensus 25 ~~~~~~~~~~l~-~~~f~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i 100 (411)
.......+..++ .++|+..+.. ++++++|+||++||++|+.+.|.+.++++.++ ++.++.+|++++++++++|+|
T Consensus 9 ~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v 87 (130)
T 1wmj_A 9 MAAEEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNV 87 (130)
T ss_dssp CCSSCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTC
T ss_pred ccccCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCC
Confidence 444556677774 5788855533 58899999999999999999999999999987 589999999999999999999
Q ss_pred CcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 101 RGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 101 ~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.++|+++++.+|+.+.++.| .+.+.+.+++.+.+
T Consensus 88 ~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 88 EAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp CSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHT
T ss_pred CccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHH
Confidence 99999999988888888888 58888999988765
No 160
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.61 E-value=1.1e-15 Score=121.03 Aligned_cols=103 Identities=18% Similarity=0.415 Sum_probs=87.4
Q ss_pred EEeCccchhHHHh---cCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEecc--ccHhHHHhcCCCccc
Q 015217 33 VQLTPNNFKSKVL---NANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFP 104 (411)
Q Consensus 33 ~~l~~~~f~~~~~---~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~--~~~~~~~~~~i~~~P 104 (411)
..++..+|.+.+. .++++++|.||++||++|+.+.|.+ ..+.+.+.+++.++.+|++ ....++++|+|.++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~P 88 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYP 88 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSC
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCC
Confidence 3456677774442 4689999999999999999999999 7777777677899999998 578899999999999
Q ss_pred EEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 105 TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 105 ~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++++ .+|+.+.++.|..+.+.+.+++.+.+
T Consensus 89 t~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 89 TLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp EEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred EEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 99999 56776778899999999999998775
No 161
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.60 E-value=5.8e-15 Score=128.41 Aligned_cols=100 Identities=24% Similarity=0.378 Sum_probs=90.1
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEEC--CCChhhhhhhHHHHHHHHHhC--CCeEEEEEe-----ccccHhHHHhcCC
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYA--PWCGHCQALTPIWEKAATVLK--GVATVAALD-----ANEHQSLAQEYGI 100 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~--~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd-----~~~~~~~~~~~~i 100 (411)
..+..|++.+|+. ++.++++|+|.||+ |||+ +.|.|++++..+. +++.|+.|| |+.++++|++|+|
T Consensus 5 ~~v~~Lt~~nF~~-~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V 79 (240)
T 2qc7_A 5 KGALPLDTVTFYK-VIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKL 79 (240)
T ss_dssp TTCEECCTTHHHH-HGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTC
T ss_pred CCceECCHHHHHH-HHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCC
Confidence 5688999999994 66778999999999 9999 9999999999986 369999999 5558999999999
Q ss_pred C--cccEEEEEeCCC--CCcccCCCCCcchhHHHHHHH
Q 015217 101 R--GFPTIKVFVPGK--PPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 101 ~--~~P~~~~~~~g~--~~~~~~g~~~~~~l~~~~~~~ 134 (411)
. ++||+++|.+|+ .+.+|.|.++.+.|.+|+.+.
T Consensus 80 ~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 80 DKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp CGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred CCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 9 999999999987 478999999999999999865
No 162
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.60 E-value=3.6e-15 Score=119.80 Aligned_cols=106 Identities=26% Similarity=0.522 Sum_probs=81.2
Q ss_pred CCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 160 NESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+.+..++.++|...+.+.++ ++|.||++||++|+.+.+.+.+++..+.+++.|+.||++.+..++++|++.++|++++|
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~ 111 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLF 111 (140)
T ss_dssp ----------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEE
T ss_pred CccccCCHHHHHHHHHcCCC-EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEE
Confidence 56788999999987665555 99999999999999999999999999998899999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
++|. ....+.|..+.+.+.+|+.+.+.
T Consensus 112 ~~G~-~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 112 RRGA-PVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp ETTE-EEEEEESCCCHHHHHHHHHHHHT
T ss_pred eCCc-EEEEEeCCCCHHHHHHHHHHHHc
Confidence 7554 35678899999999999988764
No 163
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.60 E-value=5e-15 Score=113.40 Aligned_cols=103 Identities=26% Similarity=0.450 Sum_probs=87.8
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~ 238 (411)
.......+..+|.+. ...+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.+..++++|+|.++|++++
T Consensus 6 ~~~~~~~~~~~f~~~-~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~~~~~l~~~~~v~~~Pt~~~ 83 (109)
T 3f3q_A 6 HMVTQFKTASEFDSA-IAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVDELGDVAQKNEVSAMPTLLL 83 (109)
T ss_dssp CCCEECCSHHHHHHH-TTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSSSEEEE
T ss_pred ccccCCCCHHHHHHH-HhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHcCCCccCEEEE
Confidence 344555667788875 56688999999999999999999999999999875 9999999999999999999999999999
Q ss_pred EcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 239 FGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 239 ~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
|++| +...++.|. +.+.|.+++.++
T Consensus 84 ~~~G-~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 84 FKNG-KEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-EEEEEEeCC-CHHHHHHHHHhh
Confidence 9854 446677787 778999998765
No 164
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.60 E-value=8.7e-16 Score=116.86 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=74.7
Q ss_pred CccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCC
Q 015217 166 NSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDS 245 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~ 245 (411)
+.++|.+. .+.+++++|.||++||++|+.+.|.+.++++.+. ++.|+.||++.++.++++|+|.++|++++|++|. .
T Consensus 7 ~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~-~ 83 (105)
T 4euy_A 7 TIEELATY-IEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGK-E 83 (105)
T ss_dssp ---CCSSS-TTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC---------CCCCEEEEEETTE-E
T ss_pred CHHHHHHH-HhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCe-E
Confidence 34556664 3667899999999999999999999999999984 6999999999999999999999999999998554 3
Q ss_pred cccccCCCCHHHHHHHHHHHh
Q 015217 246 PIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 246 ~~~y~g~~~~~~i~~fi~~~~ 266 (411)
..++.|..+.+.+.+++.+.+
T Consensus 84 ~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 84 ILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp EEEEESSCCHHHHHHHHHTTC
T ss_pred EEEEeCCcCHHHHHHHHHHhh
Confidence 677789999999999987653
No 165
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.60 E-value=2.5e-15 Score=116.09 Aligned_cols=104 Identities=21% Similarity=0.364 Sum_probs=87.0
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
..+.+..+++.+..+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.+..++++|++..+|+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~~~~l~~~~~v~~~Pt~~ 88 (114)
T 2oe3_A 10 SYTSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDESPDIAKECEVTAMPTFV 88 (114)
T ss_dssp CGGGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTTCHHHHHHTTCCSBSEEE
T ss_pred chhheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCCCHHHHHHCCCCcccEEE
Confidence 3455566666555554667788999999999999999999999999999987 999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
++++|. ...++.|.. .+.|.+++.+
T Consensus 89 ~~~~G~-~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 89 LGKDGQ-LIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp EEETTE-EEEEEESSC-HHHHHHHHHT
T ss_pred EEeCCe-EEEEEeCCC-HHHHHHHHHh
Confidence 997554 355688877 8888888753
No 166
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=5.5e-16 Score=124.11 Aligned_cols=105 Identities=25% Similarity=0.502 Sum_probs=90.0
Q ss_pred CCCCcEEeCccchHHHHhcCCC-eEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCchhHHhhCccc----
Q 015217 158 DSNESIELNSSNFDELVLKSKD-LWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEKSLMSKFNVQ---- 231 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~-~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~l~~~~~v~---- 231 (411)
.+..+..++.++|.+.+.+... +++|.||++||++|+.+.|.|.++++.+.+ ++.|+.||++.++.++++|+|.
T Consensus 5 ~~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~ 84 (137)
T 2dj0_A 5 SSGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPL 84 (137)
T ss_dssp CCSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSS
T ss_pred CCceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCC
Confidence 4567999999999998765554 899999999999999999999999999986 7999999999999999999999
Q ss_pred --cccEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 015217 232 --GFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 232 --~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
.+|++++|++|. ...++.|..+.+.+.+|+.
T Consensus 85 ~~~~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 85 TKQLPTLILFQGGK-EAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp SSCSSEEEEESSSS-EEEEESCBCSSSCBCCCCC
T ss_pred cCCCCEEEEEECCE-EEEEecCcCchHHHHHHHh
Confidence 999999997654 3566788777666655553
No 167
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.59 E-value=1.7e-15 Score=120.52 Aligned_cols=90 Identities=26% Similarity=0.428 Sum_probs=80.0
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHHH--HHHHHhCCCeEEEEEec---cccHhHHHhcCC---CcccEEEEE-eCCCCC
Q 015217 45 LNANGVVLVEFYAPWCGHCQALTPIWE--KAATVLKGVATVAALDA---NEHQSLAQEYGI---RGFPTIKVF-VPGKPP 115 (411)
Q Consensus 45 ~~~~~~~~v~f~~~~C~~C~~~~~~~~--~~~~~~~~~i~~~~vd~---~~~~~~~~~~~i---~~~P~~~~~-~~g~~~ 115 (411)
..++++++|+||++||++|+.+.|.|. +++..+++++.++.||+ +.+++++++|+| .++|+++++ .+|+.+
T Consensus 26 ~~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~ 105 (133)
T 3fk8_A 26 KRTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVR 105 (133)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEE
T ss_pred HhcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEE
Confidence 457999999999999999999999999 99999877899999999 899999999999 999999999 678777
Q ss_pred cccCC-------CCCcchhHHHHHHH
Q 015217 116 VDYQG-------ARDVKPIAEFALQQ 134 (411)
Q Consensus 116 ~~~~g-------~~~~~~l~~~~~~~ 134 (411)
.++.| ..+.+.+.+|+.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 106 YTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp EECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEecCCcccccccCCHHHHHHHHHHh
Confidence 77777 56777888887654
No 168
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.59 E-value=4.9e-15 Score=114.09 Aligned_cols=105 Identities=28% Similarity=0.516 Sum_probs=90.9
Q ss_pred CCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEE
Q 015217 157 SDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 157 ~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
++++....++..+|.+.+ +.+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.++.++++|++..+|++
T Consensus 6 ~~~~~~~~~~~~~f~~~~-~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~~~~~~~~~~v~~~Pt~ 83 (112)
T 1syr_A 6 HHHMVKIVTSQAEFDSII-SQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDEVSEVTEKENITSMPTF 83 (112)
T ss_dssp ---CCEEECSHHHHHHHH-HHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTTHHHHHHTTCCSSSEE
T ss_pred cceeEEEECCHHHHHHHH-ccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCCCHHHHHHcCCCcccEE
Confidence 367788899999999975 577899999999999999999999999999987 499999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
+++++|. ...++.|. +.+.+.+++.+.
T Consensus 84 ~~~~~G~-~~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 84 KVYKNGS-SVDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp EEEETTE-EEEEEESC-CHHHHHHHHHTT
T ss_pred EEEECCc-EEEEEeCC-CHHHHHHHHHHh
Confidence 9997554 35567888 899999998764
No 169
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.59 E-value=7.6e-15 Score=112.96 Aligned_cols=104 Identities=19% Similarity=0.352 Sum_probs=85.3
Q ss_pred cEEeCc-cchHHHHhc--CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 162 SIELNS-SNFDELVLK--SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 162 v~~l~~-~~~~~~~~~--~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
+..+++ ++|.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. ..+.|+.+|++.++.++++|++.++|+++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~ 81 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFI 81 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEE
Confidence 677887 888886642 36799999999999999999999999999963 46999999999999999999999999999
Q ss_pred EEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|++|. ...++.|. ..+++.+++.+.+.
T Consensus 82 ~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~ 109 (112)
T 3d6i_A 82 IIHKGT-ILKELSGA-DPKEYVSLLEDCKN 109 (112)
T ss_dssp EEETTE-EEEEECSC-CHHHHHHHHHHHHH
T ss_pred EEECCE-EEEEecCC-CHHHHHHHHHHHHh
Confidence 997554 35567776 55679999887764
No 170
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.59 E-value=7.8e-15 Score=111.42 Aligned_cols=100 Identities=25% Similarity=0.454 Sum_probs=85.2
Q ss_pred EEe-CccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEc
Q 015217 163 IEL-NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (411)
Q Consensus 163 ~~l-~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~ 240 (411)
..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++.++.++++|++.++|++++|+
T Consensus 3 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~ 81 (105)
T 3m9j_A 3 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDDCQDVASESEVKSMPTFQFFK 81 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTTCHHHHHHTTCCBSSEEEEEE
T ss_pred EEcCCHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhhhHHHHHHcCCCcCcEEEEEE
Confidence 344 34566665543 477999999999999999999999999999976 999999999999999999999999999997
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHH
Q 015217 241 ADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
+|. ...++.|. +.+.+.+++.+.
T Consensus 82 ~g~-~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 82 KGQ-KVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp TTE-EEEEEESS-CHHHHHHHHHHH
T ss_pred CCe-EEEEEeCC-CHHHHHHHHHHh
Confidence 654 35678888 999999998775
No 171
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.59 E-value=3.7e-15 Score=118.72 Aligned_cols=98 Identities=17% Similarity=0.393 Sum_probs=82.7
Q ss_pred CccchhHHHhc-CCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEec----cccHhHHHhcCCCcccEEE
Q 015217 36 TPNNFKSKVLN-ANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDA----NEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 36 ~~~~f~~~~~~-~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~----~~~~~~~~~~~i~~~P~~~ 107 (411)
+.+++...+.. ++++++|+||++||++|+.+.+.+ .++++.+++ +.++.||+ +...+++++|+|.++|+++
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~ 96 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLNVLGLPTIL 96 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTTCCSSSEEE
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcCCCCCCEEE
Confidence 34566643332 488999999999999999999999 899988875 99999999 6678899999999999999
Q ss_pred EE-eCCCCC--cccCCCCCcchhHHHHHHH
Q 015217 108 VF-VPGKPP--VDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 108 ~~-~~g~~~--~~~~g~~~~~~l~~~~~~~ 134 (411)
++ .+|+.+ .++.|..+.+.+.+++.+.
T Consensus 97 ~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 97 FFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp EECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred EECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 99 667665 6899999999999988754
No 172
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.59 E-value=1.9e-15 Score=110.12 Aligned_cols=82 Identities=28% Similarity=0.468 Sum_probs=75.0
Q ss_pred CeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhH
Q 015217 49 GVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (411)
Q Consensus 49 ~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (411)
.+.++.||++||++|+.+.|.++++++.+++++.++.+|++++++++++||+.++|++++ +|+. ++.|..+.+.+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~ 78 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALV 78 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHH
Confidence 578999999999999999999999999998889999999999999999999999999887 6653 889988999999
Q ss_pred HHHHHH
Q 015217 129 EFALQQ 134 (411)
Q Consensus 129 ~~~~~~ 134 (411)
+++.+.
T Consensus 79 ~~l~~~ 84 (85)
T 1fo5_A 79 EAIKKR 84 (85)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988764
No 173
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.59 E-value=2.7e-15 Score=119.30 Aligned_cols=112 Identities=14% Similarity=0.253 Sum_probs=96.1
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCc--ccEEEEE
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRG--FPTIKVF 109 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~--~P~~~~~ 109 (411)
+.+++.++|. .....+.+++|+||++ |++|+.+.|.++++++.+++++.|+.+|.+++++++..|||.+ +|+++++
T Consensus 8 v~~~t~~~f~-~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~ 85 (133)
T 2djk_A 8 IGEIGPETYS-DYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQ 85 (133)
T ss_dssp SEECCHHHHH-HHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEE
T ss_pred eeccChHHHH-HHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEE
Confidence 6789999998 5567788999999999 8999999999999999999999999999999999999999999 9999999
Q ss_pred eC--CCCCcccC--CCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 015217 110 VP--GKPPVDYQ--GARDVKPIAEFALQQIKALLKERLSGKATGGSSDK 154 (411)
Q Consensus 110 ~~--g~~~~~~~--g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (411)
.+ |+. .+.. |..+.+.|.+|+.+.+ .|+.....+|.
T Consensus 86 ~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l--------~Gkl~p~~kSe 125 (133)
T 2djk_A 86 EVAKNQK-FPFDQEKEITFEAIKAFVDDFV--------AGKIEPSIKSE 125 (133)
T ss_dssp CTTTCCB-CCCCSSSCCCHHHHHHHHHHHH--------HTCCCCSSCCC
T ss_pred ecCcCcc-cCCCCccccCHHHHHHHHHHHH--------cCCcCccccCC
Confidence 86 544 5654 8899899999988765 45555555554
No 174
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.59 E-value=5.3e-15 Score=116.48 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=85.8
Q ss_pred hcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEe--CCCchhHHhhCccccccEEEEEcCCCCCcccccCC
Q 015217 175 LKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVD--CDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGA 252 (411)
Q Consensus 175 ~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~--~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~ 252 (411)
...+++++|.||++||++|+.+.+.+.++++.+.+++.|+.|| ++.+..++++|++..+|++++|..++....++.|.
T Consensus 23 ~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~ 102 (126)
T 2l57_A 23 AKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGL 102 (126)
T ss_dssp CCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESC
T ss_pred HhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCC
Confidence 4557799999999999999999999999999998889999999 99899999999999999999998555546678899
Q ss_pred CCHHHHHHHHHHHhhhcCC
Q 015217 253 RTAGAIESFALEQLETNVA 271 (411)
Q Consensus 253 ~~~~~i~~fi~~~~~~~~~ 271 (411)
.+.+.+.+++.+++.....
T Consensus 103 ~~~~~l~~~l~~~~~~~~~ 121 (126)
T 2l57_A 103 MRKNNIETILNSLGVKEGH 121 (126)
T ss_dssp CCHHHHHHHHHHHCCCCCC
T ss_pred CCHHHHHHHHHHHhccccc
Confidence 9999999999998765443
No 175
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.59 E-value=6.4e-15 Score=133.41 Aligned_cols=108 Identities=22% Similarity=0.471 Sum_probs=96.4
Q ss_pred CCCCcEEeCccchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEE
Q 015217 158 DSNESIELNSSNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
..+.+..++..+|.+.+..+ +++++|.||++||++|+.+.|.|.++++.+.+++.|+.||++.++.++++|+|.++|++
T Consensus 5 ~~~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~ 84 (287)
T 3qou_A 5 SVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTV 84 (287)
T ss_dssp -CTTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEE
T ss_pred CCCccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeE
Confidence 35679999999999966433 67999999999999999999999999999998999999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++|++|. ...++.|..+.+.+..|+...+
T Consensus 85 ~~~~~G~-~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 85 YLFQNGQ-PVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEEETTE-EEEEEESCCCHHHHHHHHHHHS
T ss_pred EEEECCE-EEEEeeCCCCHHHHHHHHHHHc
Confidence 9997654 3567899999999999998875
No 176
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.58 E-value=1.2e-14 Score=110.22 Aligned_cols=100 Identities=24% Similarity=0.547 Sum_probs=85.7
Q ss_pred EEeCc-cchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEc
Q 015217 163 IELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFG 240 (411)
Q Consensus 163 ~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~ 240 (411)
..+++ +++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++.++.++++|++.++|++++|+
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~ 80 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQNEEAAAKYSVTAMPTFVFIK 80 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTCHHHHHHTTCCSSSEEEEEE
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccCCHHHHHHcCCccccEEEEEe
Confidence 45666 778776654 57799999999999999999999999999987 6999999999999999999999999999998
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHH
Q 015217 241 ADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
+|. ...++.| .+.+.+.+++.+.
T Consensus 81 ~g~-~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 81 DGK-EVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp TTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred CCc-EEEEEeC-CCHHHHHHHHHhh
Confidence 554 3566778 6888999998765
No 177
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.58 E-value=1.7e-14 Score=113.19 Aligned_cols=106 Identities=29% Similarity=0.486 Sum_probs=89.9
Q ss_pred CCCCcEEe-CccchHHHHhc---CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccc
Q 015217 158 DSNESIEL-NSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (411)
Q Consensus 158 ~~~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~ 233 (411)
....+..+ +.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++.+..++++|+|..+
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d~~~~l~~~~~v~~~ 92 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTDELKSVASDWAIQAM 92 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTSHHHHHHTTCCSS
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECccCHHHHHHcCCCcc
Confidence 45667888 55778877655 47899999999999999999999999999987 699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|++++|++|. ...++.| .+.+.+.+++.+.+
T Consensus 93 Pt~~~~~~G~-~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 93 PTFMFLKEGK-ILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp SEEEEEETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred CEEEEEECCE-EEEEEeC-CCHHHHHHHHHHhc
Confidence 9999997554 3456777 58889999987753
No 178
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.58 E-value=9.4e-15 Score=118.44 Aligned_cols=102 Identities=14% Similarity=0.185 Sum_probs=89.3
Q ss_pred eCccchHHHHh-cCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCC
Q 015217 165 LNSSNFDELVL-KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADK 243 (411)
Q Consensus 165 l~~~~~~~~~~-~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~ 243 (411)
.+.++|.+.+. ..+++++|.||++||++|+.+.|.+.++++.+.+++.|+.||++.++.++++|+|.++|+++++++|.
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~ 88 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQ 88 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTE
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCe
Confidence 35677888765 56789999999999999999999999999999888999999999999999999999999999888765
Q ss_pred CCc---------ccccC-CCCHHHHHHHHHHHhh
Q 015217 244 DSP---------IPYEG-ARTAGAIESFALEQLE 267 (411)
Q Consensus 244 ~~~---------~~y~g-~~~~~~i~~fi~~~~~ 267 (411)
. . .++.| ..+.+++.+++...+.
T Consensus 89 ~-v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 89 H-MKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp E-EEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred E-EEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 3 3 57788 7888999999887754
No 179
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.58 E-value=8.8e-15 Score=113.60 Aligned_cols=100 Identities=26% Similarity=0.526 Sum_probs=87.3
Q ss_pred cEEeCc-cchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEE
Q 015217 162 SIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 162 v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~ 239 (411)
+..+++ +++.+.+.+ .+++++|.||++||++|+.+.+.+.++++.+ .+.|+.+|++.+..++++|++.++|++++|
T Consensus 15 v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 15 LIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVDKLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp EEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETTTSHHHHHHTTCCSSSEEEEE
T ss_pred eEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECCccHHHHHHcCCCccceEEEE
Confidence 788888 888887654 5779999999999999999999999999988 799999999999999999999999999999
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 240 GADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 240 ~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++|. ...++.| .+.+.+.+++.+.
T Consensus 93 ~~G~-~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNGE-KVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETTE-EEEEEES-SCHHHHHHHHHHH
T ss_pred eCCc-EEEEEeC-CCHHHHHHHHHHh
Confidence 7654 3556778 6888999998765
No 180
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.57 E-value=2.3e-15 Score=109.68 Aligned_cols=82 Identities=22% Similarity=0.352 Sum_probs=74.5
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHH
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAE 129 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~ 129 (411)
+.+|.||++||++|+.+.|.++++++.+++++.++.+|++++++++++||+.++|++++ +|+. ++.|..+.+.+.+
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~ 78 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFE 78 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHH
Confidence 46899999999999999999999999998889999999999999999999999999887 6654 8889889999999
Q ss_pred HHHHHH
Q 015217 130 FALQQI 135 (411)
Q Consensus 130 ~~~~~~ 135 (411)
++.+.+
T Consensus 79 ~l~~~l 84 (85)
T 1nho_A 79 AINDEM 84 (85)
T ss_dssp HHHHHC
T ss_pred HHHHHh
Confidence 987653
No 181
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.57 E-value=4e-15 Score=116.62 Aligned_cols=100 Identities=11% Similarity=0.221 Sum_probs=82.6
Q ss_pred cEEeCccchhHHHhc-CCCeEEEEEECC-------CChhhhhhhHHHHHHHHHhCCCeEEEEEec-------cccHhHHH
Q 015217 32 VVQLTPNNFKSKVLN-ANGVVLVEFYAP-------WCGHCQALTPIWEKAATVLKGVATVAALDA-------NEHQSLAQ 96 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~-~~~~~~v~f~~~-------~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~-------~~~~~~~~ 96 (411)
+...+.++|.+.+.. ++++++|+||++ ||++|+.+.|.+.++++.+++++.|+.+|+ +.++.+++
T Consensus 7 v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~ 86 (123)
T 1wou_A 7 VSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRK 86 (123)
T ss_dssp EEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHH
T ss_pred EEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHH
Confidence 456677888855544 589999999999 999999999999999999988899999999 78889999
Q ss_pred hcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHH
Q 015217 97 EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 97 ~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
+|+|.++|++++|.++..+..+.| .+.+.+.+++.
T Consensus 87 ~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 87 NLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHH
T ss_pred HCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHh
Confidence 999999999999987654444444 35566666654
No 182
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.57 E-value=2.5e-15 Score=118.76 Aligned_cols=96 Identities=24% Similarity=0.377 Sum_probs=83.8
Q ss_pred cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcc
Q 015217 168 SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPI 247 (411)
Q Consensus 168 ~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~ 247 (411)
.++.+.....+++++|.||++||++|+.+.+.+.++++.+.+++.|+.||++.++.++++|+|.++|++++|++|. ...
T Consensus 32 ~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~-~~~ 110 (128)
T 3ul3_B 32 SNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKT-MLA 110 (128)
T ss_dssp CSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTE-EEE
T ss_pred ccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCE-EEE
Confidence 3333334567889999999999999999999999999999988999999999999999999999999999996544 467
Q ss_pred cccCCCCHHHHHHHHHH
Q 015217 248 PYEGARTAGAIESFALE 264 (411)
Q Consensus 248 ~y~g~~~~~~i~~fi~~ 264 (411)
++.|..+.+++.+|+.+
T Consensus 111 ~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 111 RKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EESSCCCHHHHHHHHTT
T ss_pred EecCCCCHHHHHHHHHh
Confidence 78899999999999864
No 183
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.56 E-value=2.5e-14 Score=112.28 Aligned_cols=105 Identities=22% Similarity=0.437 Sum_probs=90.1
Q ss_pred CCCCcEEeCccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-CchhHHhhCccccccE
Q 015217 158 DSNESIELNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~l~~~~~v~~~P~ 235 (411)
....+..++.+++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+.+ +.|+.+|++ .+..++++|++.++|+
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~~~~~~~~~~v~~~Pt 94 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQENKTLAKELGIRVVPT 94 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSSTTHHHHHHHCCSSSSE
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcchHHHHHHcCCCeeeE
Confidence 4567899999999987754 577999999999999999999999999999874 999999998 6889999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++++++|. ...++.|.. .+++.+++.+.
T Consensus 95 ~~~~~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 95 FKILKENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp EEEEETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred EEEEeCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 99987654 345677765 88899888765
No 184
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.56 E-value=1.2e-14 Score=112.28 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=84.2
Q ss_pred CCcEEeCccchHHHHhcCCC--eEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 160 NESIELNSSNFDELVLKSKD--LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 160 ~~v~~l~~~~~~~~~~~~~~--~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
..+.+++.++|.+.+.+..+ +++|.||++||++|+.+.|.+.++|+.+. .+.|+.||++.. +++|+|..+||++
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~~---~~~~~v~~~PT~~ 78 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNSC---IQHYHDNCLPTIF 78 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGGT---STTCCGGGCSEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHHh---HHHCCCCCCCEEE
Confidence 35788999999998766554 99999999999999999999999999986 599999998764 6899999999999
Q ss_pred EEcCCCCCcccccCC-------CCHHHHHHHHHHH
Q 015217 238 VFGADKDSPIPYEGA-------RTAGAIESFALEQ 265 (411)
Q Consensus 238 ~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~ 265 (411)
+|++|.. ..++.|. ++.++|..++.++
T Consensus 79 ~fk~G~~-v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 79 VYKNGQI-EAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp EEETTEE-EEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred EEECCEE-EEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 9998753 4445553 4678888887664
No 185
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.56 E-value=9.5e-15 Score=121.70 Aligned_cols=106 Identities=13% Similarity=0.258 Sum_probs=84.9
Q ss_pred EEeCccchhHHH---hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEeccccHhH------------
Q 015217 33 VQLTPNNFKSKV---LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEHQSL------------ 94 (411)
Q Consensus 33 ~~l~~~~f~~~~---~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~~~~~~------------ 94 (411)
...+..+|++.+ ..++++++|+||++||++|+.+.+.+ .++.+.+++++.++.||+++..++
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 345556666333 25789999999999999999985554 566666655799999999877655
Q ss_pred --------------HHhcCCCcccEEEEE-eCCCCCcccCCCCC-cchhHHHHHHHHHHH
Q 015217 95 --------------AQEYGIRGFPTIKVF-VPGKPPVDYQGARD-VKPIAEFALQQIKAL 138 (411)
Q Consensus 95 --------------~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~-~~~l~~~~~~~~~~~ 138 (411)
+++|++.++|+++++ .+|+.+.++.|..+ .+.+.+++.+.++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~~~ 168 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLENY 168 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHHHh
Confidence 789999999999999 56777888899998 999999998887654
No 186
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.56 E-value=3.1e-15 Score=128.80 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=87.1
Q ss_pred CCCcEEe-CccchhHHHhcC--CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 29 SSPVVQL-TPNNFKSKVLNA--NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 29 ~~~~~~l-~~~~f~~~~~~~--~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
...+.++ +.++|...+... +++++|+||++||++|+.+.|.|.+++..+. .+.|+.||++ ++.++.+|+|.++|+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 3457788 888999666544 3899999999999999999999999999885 6999999999 888999999999999
Q ss_pred EEEEeCCCCCcccCCCCCc-------chhHHHHHH
Q 015217 106 IKVFVPGKPPVDYQGARDV-------KPIAEFALQ 133 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~~~-------~~l~~~~~~ 133 (411)
+++|.+|+.+.++.|..+. +.|..++.+
T Consensus 176 l~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 176 LLVYKGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp EEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred EEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 9999998877788887664 566666653
No 187
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.55 E-value=2e-14 Score=115.42 Aligned_cols=103 Identities=16% Similarity=0.165 Sum_probs=84.9
Q ss_pred CccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCC
Q 015217 166 NSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKD 244 (411)
Q Consensus 166 ~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~ 244 (411)
+.++|.+.+.+ .+++++|.||++||++|+.+.|.+.++++.+.+++.|+.||++.++.++++|+|.++|++++|++|..
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~ 89 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKH 89 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcE
Confidence 45677766655 67899999999999999999999999999998889999999999999999999999999999986653
Q ss_pred Ccc--------cccCCCC-HHHHHHHHHHHhhh
Q 015217 245 SPI--------PYEGART-AGAIESFALEQLET 268 (411)
Q Consensus 245 ~~~--------~y~g~~~-~~~i~~fi~~~~~~ 268 (411)
... ...|..+ .+++.+++.+.+..
T Consensus 90 v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~~ 122 (142)
T 1qgv_A 90 IMIDLGTGNNNKINWAMEDKQEMVDIIETVYRG 122 (142)
T ss_dssp EEEECC------CCSCCSCHHHHHHHHHHHHHH
T ss_pred EEEecCCCCcceeeeecCcHHHHHHHHHHHHHH
Confidence 211 3455554 78888888776653
No 188
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.54 E-value=9.1e-15 Score=117.08 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=79.8
Q ss_pred CcEEeCccchHHHHhcCCCeEEEEEeCCC--ChhhhhhhHHHHHHHHHhcCCeE--EEEEeCCCchhHHhhCccccccEE
Q 015217 161 ESIELNSSNFDELVLKSKDLWIVEFFAPW--CGHCKKLAPEWKKAANNLKGKVK--LGHVDCDSEKSLMSKFNVQGFPTI 236 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~--c~~c~~~~~~~~~~a~~~~~~~~--f~~v~~~~~~~l~~~~~v~~~P~i 236 (411)
.+..+++++|.+.+ ..++.++|+|++.| |++|+.+.|.|.++++.+ +++. |+.||++.+++++++|+|.++|++
T Consensus 18 ~~~~l~~~~f~~~i-~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 18 GWQPVEASTVDDWI-KRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQSEAIGDRFNVRRFPAT 95 (142)
T ss_dssp TCEECCCC---------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHHHHHHHHTTTCCSSSEE
T ss_pred cCcccccccHHHHH-HhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCCCHHHHHhcCCCcCCeE
Confidence 68899999999975 45556788898877 999999999999999999 7788 999999999999999999999999
Q ss_pred EEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 237 LVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
++|++|. ...++.|..+.+.|.+++.+.+.
T Consensus 96 ~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 96 LVFTDGK-LRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp EEESCC-----CEESCCCHHHHHHHHHHHHC
T ss_pred EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhc
Confidence 9997654 46788999999999999998875
No 189
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.54 E-value=5.1e-14 Score=122.83 Aligned_cols=104 Identities=15% Similarity=0.334 Sum_probs=92.6
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEEEEEe--CCCChhhhhhhHHHHHHHHHhc---CCeEEEEEeCCC-----chhHHhh
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWIVEFF--APWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDS-----EKSLMSK 227 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~--~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~-----~~~l~~~ 227 (411)
..+.+..++..+|.+ +...+++++|.|| ++||+ +.|.|.++|..+. +.+.|+.|||+. ++++|++
T Consensus 14 ~~~~v~~Lt~~nF~~-vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~ 88 (248)
T 2c0g_A 14 TCTGCVDLDELSFEK-TVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDR 88 (248)
T ss_dssp -CTTCEECCTTTHHH-HHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHH
T ss_pred CCCCcEECCHHHHHH-HHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHH
Confidence 456789999999999 4577789999999 99997 9999999999994 479999999998 8999999
Q ss_pred Cccc--cccEEEEEcCCC-CCcccc--cCCCCHHHHHHHHHHHhh
Q 015217 228 FNVQ--GFPTILVFGADK-DSPIPY--EGARTAGAIESFALEQLE 267 (411)
Q Consensus 228 ~~v~--~~P~i~~~~~~~-~~~~~y--~g~~~~~~i~~fi~~~~~ 267 (411)
|+|. ++||+++|+ |. ..+..| .|..+.+.|.+|+.+++.
T Consensus 89 ~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 89 YKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp TTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred hCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 9999 999999999 65 346788 999999999999999875
No 190
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.54 E-value=4.1e-14 Score=115.39 Aligned_cols=109 Identities=21% Similarity=0.413 Sum_probs=90.6
Q ss_pred CCCCcEEeCc-cchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 158 DSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
....+..+++ ++|.+.+... +++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++.++.++++|+|.++|+
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt 88 (153)
T 2wz9_A 10 AVAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-QVSFVKLEAEGVPEVSEKYEISSVPT 88 (153)
T ss_dssp --CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSSSE
T ss_pred ccCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-CeEEEEEECCCCHHHHHHcCCCCCCE
Confidence 3466888875 7787765443 7899999999999999999999999999984 69999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
+++|++| +...++.| .+.++|.+++.+.+...
T Consensus 89 ~~~~~~G-~~~~~~~G-~~~~~l~~~i~~~l~~~ 120 (153)
T 2wz9_A 89 FLFFKNS-QKIDRLDG-AHAPELTKKVQRHASSG 120 (153)
T ss_dssp EEEEETT-EEEEEEES-SCHHHHHHHHHHHSCTT
T ss_pred EEEEECC-EEEEEEeC-CCHHHHHHHHHHHhccc
Confidence 9999944 33455677 57889999999987643
No 191
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.54 E-value=7.6e-15 Score=127.95 Aligned_cols=92 Identities=15% Similarity=0.211 Sum_probs=79.3
Q ss_pred CCCcEEe-CccchhHHHhc--CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccE
Q 015217 29 SSPVVQL-TPNNFKSKVLN--ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPT 105 (411)
Q Consensus 29 ~~~~~~l-~~~~f~~~~~~--~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~ 105 (411)
...+.++ +.++|...+.. +++++||+||++||++|+.+.|.|.+++..+.+ +.|+.||++. +.++.+|+|.++||
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCE
Confidence 3457788 78899965543 478999999999999999999999999999875 9999999987 77999999999999
Q ss_pred EEEEeCCCCCcccCCCC
Q 015217 106 IKVFVPGKPPVDYQGAR 122 (411)
Q Consensus 106 ~~~~~~g~~~~~~~g~~ 122 (411)
+++|.+|+.+.++.|..
T Consensus 189 ll~~~~G~~v~~~vG~~ 205 (245)
T 1a0r_P 189 LLVYKGGELLSNFISVT 205 (245)
T ss_dssp EEEEETTEEEEEETTGG
T ss_pred EEEEECCEEEEEEeCCc
Confidence 99999887766676653
No 192
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.54 E-value=4.2e-14 Score=108.85 Aligned_cols=104 Identities=25% Similarity=0.452 Sum_probs=88.4
Q ss_pred CCcEEe-CccchHHHHhc---CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 160 NESIEL-NSSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 160 ~~v~~l-~~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
..+..+ +.++|.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. ++.|+.+|++.++.++++|++..+|+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~Pt 82 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVDELKAVAEEWNVEAMPT 82 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETTTCHHHHHHHHCSSTTE
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEccccHHHHHhCCCCcccE
Confidence 457777 55778877654 47799999999999999999999999999987 69999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+++|++|. ....+.| .+.+.+.+++.+.+
T Consensus 83 ~~~~~~G~-~~~~~~g-~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 83 FIFLKDGK-LVDKTVG-ADKDGLPTLVAKHA 111 (113)
T ss_dssp EEEEETTE-EEEEEEC-CCTTHHHHHHHHHH
T ss_pred EEEEeCCE-EEEEEec-CCHHHHHHHHHHhh
Confidence 99997554 3456677 68889999998765
No 193
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.53 E-value=1.3e-12 Score=115.39 Aligned_cols=203 Identities=9% Similarity=0.111 Sum_probs=157.5
Q ss_pred cEEeCc-cchhHHHhcC-CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEE
Q 015217 32 VVQLTP-NNFKSKVLNA-NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVF 109 (411)
Q Consensus 32 ~~~l~~-~~f~~~~~~~-~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~ 109 (411)
+..+++ ++++ .++.. +++++|-|+.++| ....+.|.++|..+++.+.|+.+. +.++++++++.+ |++++|
T Consensus 8 v~~l~s~~~~~-~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivlf 79 (250)
T 3ec3_A 8 SKEILTLKQVQ-EFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVLM 79 (250)
T ss_dssp SEECCCHHHHH-HHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEEE
T ss_pred ceecCCHHHHH-HHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEEE
Confidence 566755 6676 55666 8899999999875 577889999999999999998874 678899999988 999999
Q ss_pred eCC-------CCCcccC--CCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCe
Q 015217 110 VPG-------KPPVDYQ--GARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDL 180 (411)
Q Consensus 110 ~~g-------~~~~~~~--g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~ 180 (411)
+++ .....|. |..+.+.|.+|+... ..+.+.+++.+++...+ . ..+
T Consensus 80 k~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~-----------------------~~Plv~e~t~~n~~~~~-~-~~~ 134 (250)
T 3ec3_A 80 QPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH-----------------------ALPLVGHRKTSNDAKRY-S-KRP 134 (250)
T ss_dssp CCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH-----------------------SSCTEEEECTTTHHHHS-C-SSS
T ss_pred ecchhhccccccceeccCCCCCCHHHHHHHHHHc-----------------------CCCceeecCccchhhhh-c-cCc
Confidence 853 2346777 478899999999876 46889999999998854 3 556
Q ss_pred EEEEEeC-CCC---hh-hhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccc--c-cEEEEEcCCCCCccccc-C
Q 015217 181 WIVEFFA-PWC---GH-CKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQG--F-PTILVFGADKDSPIPYE-G 251 (411)
Q Consensus 181 ~lv~f~~-~~c---~~-c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~--~-P~i~~~~~~~~~~~~y~-g 251 (411)
.++.|+. +.+ .. ...+...+.++|+.|+ ++.|+.+|++.....++.||+.. . |.++++...+ ..+.+. +
T Consensus 135 l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~-~ky~~~~~ 212 (250)
T 3ec3_A 135 LVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-EYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESG-KKFAMEPE 212 (250)
T ss_dssp EEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTS-CEEECCCC
T ss_pred cEEEEEecccccccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCC-ceecCCcc
Confidence 6666664 222 22 3557889999999999 99999999988888889999874 3 5777765332 244455 6
Q ss_pred CCCHHHHHHHHHHHhhhc
Q 015217 252 ARTAGAIESFALEQLETN 269 (411)
Q Consensus 252 ~~~~~~i~~fi~~~~~~~ 269 (411)
.++.++|.+|+...+...
T Consensus 213 ~~t~~~i~~Fv~~~~~Gk 230 (250)
T 3ec3_A 213 EFDSDALREFVMAFKKGK 230 (250)
T ss_dssp SCCHHHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCC
Confidence 789999999999988755
No 194
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.53 E-value=3.4e-14 Score=110.40 Aligned_cols=106 Identities=19% Similarity=0.368 Sum_probs=87.8
Q ss_pred CCcEEe--CccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEE
Q 015217 160 NESIEL--NSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTIL 237 (411)
Q Consensus 160 ~~v~~l--~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~ 237 (411)
+.+..+ +..+|.+.+.+.+++++|.||++||++|+.+.+.+.++++.+ +.+.|+.||++.+..++++|+|.++|+++
T Consensus 3 ~~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~ 81 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDKNGNAADAYGVSSIPALF 81 (118)
T ss_dssp CCSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTTCHHHHHHTTCCSSSEEE
T ss_pred CcceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCCCHHHHHhcCCCCCCEEE
Confidence 346777 567787666667889999999999999999999999999999 77999999999999999999999999999
Q ss_pred EEcCC---CCCcccccCCCCHHHHHHHHHHHhh
Q 015217 238 VFGAD---KDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 238 ~~~~~---~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+|+++ +....++.|.. .++|...+.++..
T Consensus 82 ~~~~~~~~G~~~~~~~G~~-~~~l~~~~~~~~~ 113 (118)
T 2f51_A 82 FVKKEGNEIKTLDQFVGAD-VSRIKADIEKFKH 113 (118)
T ss_dssp EEEEETTEEEEEEEEESCC-HHHHHHHHHHHC-
T ss_pred EEeCCCCcceEEEeecCCC-HHHHHHHHHHhhh
Confidence 99761 33345677754 4678888888753
No 195
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.53 E-value=5.4e-14 Score=109.15 Aligned_cols=106 Identities=24% Similarity=0.442 Sum_probs=89.9
Q ss_pred CCCcEEeC-ccchHHHHhc---CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccccc
Q 015217 159 SNESIELN-SSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 159 ~~~v~~l~-~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
...+..++ ..+|.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.+|++.+..++++|++..+|
T Consensus 5 ~~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~v~~~P 83 (118)
T 2vm1_A 5 EGAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDELKDVAEAYNVEAMP 83 (118)
T ss_dssp CCCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCSBS
T ss_pred CCceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcccCHHHHHHcCCCcCc
Confidence 45677774 5778776654 37899999999999999999999999999987 6999999999999999999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
++++|++|. ....+.| .+.+.+.+++.+.+.
T Consensus 84 t~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 84 TFLFIKDGE-KVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp EEEEEETTE-EEEEEES-CCHHHHHHHHHHHHC
T ss_pred EEEEEeCCe-EEEEecC-CCHHHHHHHHHHHhc
Confidence 999997554 3456677 588999999988764
No 196
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.29 E-value=7.2e-16 Score=117.31 Aligned_cols=103 Identities=31% Similarity=0.599 Sum_probs=90.7
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++..++.+.+.+.+++++|.||++||++|+.+.+.+.++++.+.+++.|+.+|++.+..++++|++..+|++++|++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~ 82 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKN 82 (106)
Confidence 56788888887766778899999999999999999999999999998889999999999999999999999999999954
Q ss_pred CCCCcccccCCCCHHHHHHHHHHH
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
| .....+.|..+.+.+.+++.+.
T Consensus 83 g-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 83 G-QVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 4 4466788988888998888654
No 197
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.52 E-value=2.8e-14 Score=111.42 Aligned_cols=106 Identities=20% Similarity=0.480 Sum_probs=90.9
Q ss_pred CCCCcEEeCc-cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCchhHHhhCccccccE
Q 015217 158 DSNESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
....+..+++ ++|.+.+ ..+++++|.||++||++|+.+.+.+.++++.+.++ +.|+.+|++.+..++++|++..+|+
T Consensus 13 ~~~~~~~i~~~~~f~~~l-~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt 91 (121)
T 2j23_A 13 PRGSVQVISSYDQFKQVT-GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPT 91 (121)
T ss_dssp CCCCEEECCSHHHHHHHH-SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSE
T ss_pred CCcceEEcCCHHHHHHHH-cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccE
Confidence 4566777777 6777754 77789999999999999999999999999998876 9999999999999999999999999
Q ss_pred EEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 236 ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+++|++|. ...++.|. +.+++.+|+.+.+
T Consensus 92 ~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 92 FVFFKNGQ-KIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp EEEEETTE-EEEEEESS-CHHHHHHHHHHHT
T ss_pred EEEEECCe-EEeeEcCC-CHHHHHHHHHHhh
Confidence 99997554 35667887 8999999988754
No 198
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.52 E-value=8.8e-15 Score=116.68 Aligned_cols=105 Identities=19% Similarity=0.248 Sum_probs=90.3
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC---------CCchhHHhhCc
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC---------DSEKSLMSKFN 229 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~---------~~~~~l~~~~~ 229 (411)
...+..++..+|.+.+.. +++|.||++||++|+.+.|.+.++++.++ +.|+.||+ +.+..++++|+
T Consensus 15 ~~~v~~l~~~~~~~~~~~---~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~ 89 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG---DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG 89 (135)
T ss_dssp TTEEEECCHHHHHHHHTS---SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT
T ss_pred cCceeecCHHHHHHHhCC---cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC
Confidence 356888999999987643 99999999999999999999999999987 89999999 77888999999
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
|.++|++++|++|. ...++.|..+.+.+..++.+.+...
T Consensus 90 v~~~Pt~~~~~~G~-~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 90 VEGTPTLVFYKEGR-IVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp CCSSSEEEEEETTE-EEEEEESCCCHHHHHHHHHHHC---
T ss_pred CceeCeEEEEcCCE-EEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 99999999999554 4678899999999999998887543
No 199
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.52 E-value=9.9e-14 Score=111.13 Aligned_cols=108 Identities=15% Similarity=0.332 Sum_probs=90.7
Q ss_pred CCCCcEEeC-ccchHHHHh---cCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccc
Q 015217 158 DSNESIELN-SSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (411)
Q Consensus 158 ~~~~v~~l~-~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~ 233 (411)
....+..++ .++|.+.+. ..+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.+..++++|+|.++
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~ 100 (139)
T 3d22_A 22 AGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVDELSDFSASWEIKAT 100 (139)
T ss_dssp SCTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTTSHHHHHHTTCCEE
T ss_pred cCCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCcccHHHHHHcCCCcc
Confidence 345566675 678887664 347899999999999999999999999999985 699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
|+++++++|. ....+.|. +.+.+.+++.+.+..
T Consensus 101 Pt~~~~~~G~-~~~~~~G~-~~~~l~~~l~~~~~~ 133 (139)
T 3d22_A 101 PTFFFLRDGQ-QVDKLVGA-NKPELHKKITAILDS 133 (139)
T ss_dssp SEEEEEETTE-EEEEEESC-CHHHHHHHHHHHHHT
T ss_pred cEEEEEcCCe-EEEEEeCC-CHHHHHHHHHHHhcc
Confidence 9999996554 35667787 889999999888753
No 200
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.52 E-value=1.6e-14 Score=108.20 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=78.4
Q ss_pred cEEeC-ccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHh----HHHhcCCCc-ccE
Q 015217 32 VVQLT-PNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRG-FPT 105 (411)
Q Consensus 32 ~~~l~-~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~----~~~~~~i~~-~P~ 105 (411)
...++ .++|+ .+++++++++|+|+|+||++|+.+.|.+++++.. +++.++.+|.++.++ ++.++||.+ .|+
T Consensus 8 ~~~i~s~e~f~-~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq 84 (112)
T 3iv4_A 8 AIKLSSIDQFE-QVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQ 84 (112)
T ss_dssp EEECCSHHHHH-HHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSE
T ss_pred eeecCCHHHHH-HHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCe
Confidence 45554 46788 5666799999999999999999999999999984 578999999999976 899999995 999
Q ss_pred EEEEeCCCCCcc-cCCCCCcchhHHH
Q 015217 106 IKVFVPGKPPVD-YQGARDVKPIAEF 130 (411)
Q Consensus 106 ~~~~~~g~~~~~-~~g~~~~~~l~~~ 130 (411)
+++|++|+.+.+ -.+..+.+.|.+.
T Consensus 85 ~il~k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 85 AFYFVNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEETTEEEEEEEGGGCSHHHHHHH
T ss_pred EEEEECCEEEEEeeccccCHHHHHHh
Confidence 999999987554 3456666655543
No 201
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.52 E-value=1.3e-13 Score=109.39 Aligned_cols=109 Identities=17% Similarity=0.285 Sum_probs=94.5
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccc--ccEE
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQG--FPTI 236 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~--~P~i 236 (411)
.+.+.+++..+|.+. .....+++|.||++ |++|+.+.+.+.++|+.|++++.|+.+|.+.++.++++|||.+ +|++
T Consensus 5 ~plv~~~t~~~f~~~-~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl 82 (133)
T 2djk_A 5 SPLIGEIGPETYSDY-MSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAF 82 (133)
T ss_dssp CCCSEECCHHHHHHH-HHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEE
T ss_pred cCceeccChHHHHHH-hcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEE
Confidence 355889999999886 56677899999999 8999999999999999999999999999999999999999999 9999
Q ss_pred EEEcCCCCCccccc--CCCCHHHHHHHHHHHhhhc
Q 015217 237 LVFGADKDSPIPYE--GARTAGAIESFALEQLETN 269 (411)
Q Consensus 237 ~~~~~~~~~~~~y~--g~~~~~~i~~fi~~~~~~~ 269 (411)
++|+.++...+... |..+.+.|.+|+.+.+...
T Consensus 83 ~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gk 117 (133)
T 2djk_A 83 AIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGK 117 (133)
T ss_dssp EEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTC
T ss_pred EEEecCcCcccCCCCccccCHHHHHHHHHHHHcCC
Confidence 99986222245655 8999999999999888643
No 202
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.27 E-value=1e-15 Score=121.32 Aligned_cols=97 Identities=22% Similarity=0.278 Sum_probs=83.9
Q ss_pred cchhHHHhcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEecc--ccHhHHHhcCCCcccEEEEE--e
Q 015217 38 NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFPTIKVF--V 110 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~--~~~~~~~~~~i~~~P~~~~~--~ 110 (411)
+.+. ....++++++|+||++||++|+.+.|.+ .++++.+++++.++.||++ +...++++|+|.++|++++| .
T Consensus 10 ~~~~-~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~ 88 (130)
T 2lst_A 10 EALA-LAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPK 88 (130)
Confidence 3444 4556789999999999999999999999 8999888888999999995 56889999999999999999 4
Q ss_pred CCCC--CcccCCCCCcchhHHHHHHHH
Q 015217 111 PGKP--PVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 111 ~g~~--~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+|+. +.++.|..+.+.+.+++.+.+
T Consensus 89 ~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 89 AGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 5776 778999999999999998765
No 203
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.52 E-value=2.8e-14 Score=109.41 Aligned_cols=101 Identities=17% Similarity=0.270 Sum_probs=86.7
Q ss_pred cEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcC
Q 015217 162 SIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGA 241 (411)
Q Consensus 162 v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~ 241 (411)
+..++.++| +.+ ..+++++|.||++||++|+.+.+.+.+++..+. .+.|+.+|++.+..++++|++.++|++++|++
T Consensus 5 ~~~~~~~~f-~~~-~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~ 81 (110)
T 2l6c_A 5 RDITTEAGM-AHF-EGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSEARPELMKELGFERVPTLVFIRD 81 (110)
T ss_dssp SBCGGGCSH-HHH-TTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGGGCHHHHHHTTCCSSCEEEEEES
T ss_pred eecCCHHHH-HHH-HcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCcCCHHHHHHcCCcccCEEEEEEC
Confidence 455677888 544 556889999999999999999999999999876 69999999999999999999999999999965
Q ss_pred CCCCcccccCCCCHHHHHHHHHHHh
Q 015217 242 DKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 242 ~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|. ...++.|..+.++|.+++....
T Consensus 82 G~-~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 82 GK-VAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp SS-EEEEEESCCCHHHHHHHHHTC-
T ss_pred CE-EEEEEcCCCCHHHHHHHHHHHh
Confidence 54 4667889899999999987764
No 204
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.51 E-value=1.2e-14 Score=110.43 Aligned_cols=92 Identities=14% Similarity=0.113 Sum_probs=72.7
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC--CCeEEEEEecccc--HhHHHhcCCCcccEEEEEeCCCCCcccCCC
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH--QSLAQEYGIRGFPTIKVFVPGKPPVDYQGA 121 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd~~~~--~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~ 121 (411)
.+.+.+||+||++||++|+.+.+.+........ ..+.+..||.+.+ ..++.+|+|.++||+++|.+|+.+.+..|.
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~ 95 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGY 95 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECC
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCC
Confidence 356789999999999999999875443322110 1267788888865 579999999999999999999989999999
Q ss_pred CCcchhHHHHHHHHHH
Q 015217 122 RDVKPIAEFALQQIKA 137 (411)
Q Consensus 122 ~~~~~l~~~~~~~~~~ 137 (411)
.+.+.+..|+.+.+..
T Consensus 96 ~~~~~f~~~L~~~l~~ 111 (116)
T 3dml_A 96 PGEDFFWPMLARLIGQ 111 (116)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999887643
No 205
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.50 E-value=1.9e-13 Score=118.89 Aligned_cols=103 Identities=22% Similarity=0.461 Sum_probs=91.8
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeC--CCChhhhhhhHHHHHHHHHhcC--CeEEEEEe-----CCCchhHHhhCc
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFA--PWCGHCKKLAPEWKKAANNLKG--KVKLGHVD-----CDSEKSLMSKFN 229 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~--~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~-----~~~~~~l~~~~~ 229 (411)
...+..|+..+|.+. ...+++++|.||+ +||+ +.|.|.++|..+.+ .+.|+.|| |+.++.+|++|+
T Consensus 4 ~~~v~~Lt~~nF~~~-i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~ 78 (240)
T 2qc7_A 4 TKGALPLDTVTFYKV-IPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYK 78 (240)
T ss_dssp CTTCEECCTTHHHHH-GGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTT
T ss_pred CCCceECCHHHHHHH-HcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcC
Confidence 456899999999995 4677899999999 9998 99999999999964 69999999 555899999999
Q ss_pred cc--cccEEEEEcCCC-CCcccccCCCCHHHHHHHHHHHh
Q 015217 230 VQ--GFPTILVFGADK-DSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 230 v~--~~P~i~~~~~~~-~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|. ++||+++|++|. ..+..|.|..+.+.|.+|+.++.
T Consensus 79 V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 79 LDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp CCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred CCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 99 999999998876 45789999999999999999885
No 206
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.49 E-value=2.7e-14 Score=110.99 Aligned_cols=103 Identities=13% Similarity=0.156 Sum_probs=83.6
Q ss_pred CCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC----CchhHHhhCcccccc
Q 015217 159 SNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD----SEKSLMSKFNVQGFP 234 (411)
Q Consensus 159 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~----~~~~l~~~~~v~~~P 234 (411)
...+..++..++.+.+ ..+++++|.||++||++|+.+.|.+.++++.+...+.++.++.. ....++++|+|.++|
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~P 89 (118)
T 1zma_A 11 IKDLEVTTVVRAQEAL-DKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVP 89 (118)
T ss_dssp TTTSEECCHHHHHHHH-HTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSC
T ss_pred HhhhhcCCHHHHHHHH-hCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCC
Confidence 3568889999999865 55679999999999999999999999999998766666543321 224788999999999
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
++++|++|. ...++.|..+.+.|.+|+.
T Consensus 90 t~~~~~~G~-~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 90 GFVHITDGQ-INVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp EEEEEETTE-EEEECCTTCCHHHHHHHHT
T ss_pred eEEEEECCE-EEEEecCCCCHHHHHHHhh
Confidence 999997654 3567889999999998874
No 207
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.49 E-value=4.4e-14 Score=112.22 Aligned_cols=108 Identities=22% Similarity=0.345 Sum_probs=88.5
Q ss_pred CCCCCcEEeCc-cchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCcccccc
Q 015217 157 SDSNESIELNS-SNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFP 234 (411)
Q Consensus 157 ~~~~~v~~l~~-~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P 234 (411)
+....+..+++ +++.+.+... +++++|.||++||++|+.+.+.|.++++.+ .+.|+.||++.+..++++|+|.++|
T Consensus 17 ~~~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~~~~~l~~~~~v~~~P 94 (133)
T 3cxg_A 17 QGQSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVDIHPKLNDQHNIKALP 94 (133)
T ss_dssp ETTEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETTTCHHHHHHTTCCSSS
T ss_pred cCCccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEeccchHHHHHhcCCCCCC
Confidence 45566888886 6677655443 469999999999999999999999998887 5899999999999999999999999
Q ss_pred EEEEEc--CCC-CCcccccCCCCHHHHHHHHHHHhh
Q 015217 235 TILVFG--ADK-DSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 235 ~i~~~~--~~~-~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
++++|+ ++. ....++.|. +.++|.+++.+.+.
T Consensus 95 t~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 95 TFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp EEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred EEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 999995 443 135567786 88999999988753
No 208
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.49 E-value=2.4e-13 Score=109.86 Aligned_cols=102 Identities=16% Similarity=0.227 Sum_probs=87.2
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec------------------------
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA------------------------ 88 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~------------------------ 88 (411)
..++++.+. ....++++++|.||++||++|+...|.+.++.+.+++++.++.|++
T Consensus 15 ~~~~g~~~~-~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2b5x_A 15 AWLNGEVTR-EQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP 93 (148)
T ss_dssp EEESCCCCH-HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSC
T ss_pred ccccCcccc-hhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcc
Confidence 567777777 4445789999999999999999999999999999987799999985
Q ss_pred ---cccHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 89 ---NEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 89 ---~~~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+.+..++++|++.++|+++++ ++|+...++.|..+.+.+.+++.+.+
T Consensus 94 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 94 IFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp EEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHH
T ss_pred eEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 445689999999999999999 56666777889889899999888775
No 209
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=3e-13 Score=107.61 Aligned_cols=104 Identities=13% Similarity=0.138 Sum_probs=86.7
Q ss_pred CCCCcEEeCccchHHHHhcCC--CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 158 DSNESIELNSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~--~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
....+..++..+|.+.+.... ++++|.||++||++|+.+.+.|.++++.+. .+.|+.||++... ++|+|..+|+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~---~~~~i~~~Pt 83 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI---EHYHDNCLPT 83 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC---SSCCSSCCSE
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc---ccCCCCCCCE
Confidence 346688899999998776543 589999999999999999999999999985 5999999988764 7899999999
Q ss_pred EEEEcCCCCCcccccCCC-------CHHHHHHHHHHHh
Q 015217 236 ILVFGADKDSPIPYEGAR-------TAGAIESFALEQL 266 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~-------~~~~i~~fi~~~~ 266 (411)
+++|++|. ...++.|.. +.+.|..++.++-
T Consensus 84 ~~~~~~G~-~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 84 IFVYKNGQ-IEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp EEEESSSS-CSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred EEEEECCE-EEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 99998654 355666754 7888999988764
No 210
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.48 E-value=1.6e-14 Score=119.07 Aligned_cols=100 Identities=14% Similarity=0.290 Sum_probs=81.8
Q ss_pred cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHh-HHHhcCC--CcccEEEEE-eCCC
Q 015217 38 NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS-LAQEYGI--RGFPTIKVF-VPGK 113 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~-~~~~~~i--~~~P~~~~~-~~g~ 113 (411)
+.+. ....++++++|.||++||++|+.+.|.|.++++.....+.|+.||++.+.. ++.+|++ .++|++++| .+|+
T Consensus 37 ~~~~-~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~ 115 (164)
T 1sen_A 37 DGKK-EAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGK 115 (164)
T ss_dssp HHHH-HHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSC
T ss_pred HHHH-HHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCC
Confidence 4455 445678999999999999999999999999877665557788899988877 8899998 569999999 6787
Q ss_pred CCcccCCC----------CCcchhHHHHHHHHHHH
Q 015217 114 PPVDYQGA----------RDVKPIAEFALQQIKAL 138 (411)
Q Consensus 114 ~~~~~~g~----------~~~~~l~~~~~~~~~~~ 138 (411)
.+.++.|. .+.+.+.+++.+.+...
T Consensus 116 ~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 150 (164)
T 1sen_A 116 VHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERL 150 (164)
T ss_dssp BCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCccchhcccCCHHHHHHHHHHHHHhc
Confidence 77778774 67888888888877554
No 211
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.2e-13 Score=109.34 Aligned_cols=107 Identities=22% Similarity=0.392 Sum_probs=89.1
Q ss_pred cEEeCccchHHHHh---cCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCC--CchhHHhhCccccc
Q 015217 162 SIELNSSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGF 233 (411)
Q Consensus 162 v~~l~~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~--~~~~l~~~~~v~~~ 233 (411)
...++..++.+.+. ..+++++|.||++||++|+.+.+.+ ..+++.+...+.++.+|++ ....++++|++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~ 87 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAY 87 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSS
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCC
Confidence 44557777877653 3578999999999999999999999 7788877777999999998 57789999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
|++++|..+++...++.|..+.+.+.+++.+.+..
T Consensus 88 Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 88 PTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp CEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 99999955555466788999999999999988753
No 212
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.47 E-value=6.4e-14 Score=114.32 Aligned_cols=89 Identities=16% Similarity=0.273 Sum_probs=76.4
Q ss_pred cCCCeEEEEEE-CCCChhhhhhhHHH---HHHHHHhCCCeEEEEEecccc-----------HhHHHhcCCCcccEEEEE-
Q 015217 46 NANGVVLVEFY-APWCGHCQALTPIW---EKAATVLKGVATVAALDANEH-----------QSLAQEYGIRGFPTIKVF- 109 (411)
Q Consensus 46 ~~~~~~~v~f~-~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~~~-----------~~~~~~~~i~~~P~~~~~- 109 (411)
.++++++|+|| ++||++|+.+.|.+ .++.+....++.++.+|++.. .+++++|+|.++|+++++
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID 124 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc
Confidence 46899999999 99999999999999 777776656799999999865 389999999999999999
Q ss_pred eCCCCCcccCCCC--CcchhHHHHHHHH
Q 015217 110 VPGKPPVDYQGAR--DVKPIAEFALQQI 135 (411)
Q Consensus 110 ~~g~~~~~~~g~~--~~~~l~~~~~~~~ 135 (411)
.+|+.+.++ |.. +.+.+.+++.+.+
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 567767778 888 7888888887765
No 213
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.47 E-value=1.1e-13 Score=110.11 Aligned_cols=101 Identities=15% Similarity=0.267 Sum_probs=83.0
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccc---------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE--------------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~--------------------- 90 (411)
+..++++.+. ....++++++|.||++||++|+...+.+.++.+.++ ++.++.|+++.
T Consensus 9 l~~~~g~~~~-l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d 86 (136)
T 1lu4_A 9 ATTLSGAPFD-GASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLND 86 (136)
T ss_dssp EEBTTSCEEE-GGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEEC
T ss_pred eecCCCCeec-HHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEEC
Confidence 3344555555 333368899999999999999999999999999998 79999999987
Q ss_pred -cHhHHHhcCCCcccEEEEEe-CCCCCcccC---CCCCcchhHHHHHHHH
Q 015217 91 -HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQ---GARDVKPIAEFALQQI 135 (411)
Q Consensus 91 -~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~---g~~~~~~l~~~~~~~~ 135 (411)
+..++++|++.++|++++++ +|+.. ++. |..+.+.+.+++.+.+
T Consensus 87 ~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 87 ADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp TTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred CchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 57899999999999999995 56545 888 9999989988887653
No 214
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.47 E-value=2.5e-13 Score=112.10 Aligned_cols=110 Identities=21% Similarity=0.315 Sum_probs=90.4
Q ss_pred cCCCCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccHhHHHhc------
Q 015217 26 YGSSSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQSLAQEY------ 98 (411)
Q Consensus 26 ~~~~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~------ 98 (411)
..++..+..++++.+. ....++++++|.||++||++|+...|.+.++.+.+++. +.++.|+++...+.+++|
T Consensus 13 ~~p~~~l~~~~g~~~~-l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~ 91 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFS-SASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGI 91 (165)
T ss_dssp BCCCCEEECTTSCEEE-GGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTC
T ss_pred CCCCceeeCCCCCEec-hhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCC
Confidence 3344555566666666 33346899999999999999999999999999999874 999999999877777766
Q ss_pred ---------------------CCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 99 ---------------------GIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 99 ---------------------~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
++.++|+++++. +|+...++.|..+.+.+.+++.+.++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 151 (165)
T 3or5_A 92 IYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALG 151 (165)
T ss_dssp CSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC
T ss_pred CCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 899999999984 56667788899999999999988763
No 215
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.47 E-value=9e-15 Score=110.94 Aligned_cols=76 Identities=22% Similarity=0.430 Sum_probs=64.3
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc------ccHhHHHhcCCCcccEEEEEeCCCCCcccC
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQ 119 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~------~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~ 119 (411)
..+++++|.||++||++|+.+.|.|+++++.++ .|||+ +++++|++|+|.++|++++ +|+ .|.
T Consensus 10 ~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~ 78 (106)
T 3kp8_A 10 HLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYT 78 (106)
T ss_dssp HHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEE
T ss_pred hcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---Eec
Confidence 346778999999999999999999999987664 56666 6788999999999999776 664 488
Q ss_pred CCCCcchhHHHHH
Q 015217 120 GARDVKPIAEFAL 132 (411)
Q Consensus 120 g~~~~~~l~~~~~ 132 (411)
|..+.+.|.+|+.
T Consensus 79 G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 79 GVRSLEALAVASG 91 (106)
T ss_dssp SCCCHHHHHHHHT
T ss_pred CCCCHHHHHHHhC
Confidence 9999999988874
No 216
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.45 E-value=2.7e-13 Score=107.83 Aligned_cols=101 Identities=17% Similarity=0.285 Sum_probs=83.4
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccc---------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANE--------------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~--------------------- 90 (411)
+..++++.+. ....++++++|.||++||++|+...+.+.++.+.++ ++.++.|+++.
T Consensus 10 ~~~~~g~~~~-l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (136)
T 1zzo_A 10 AKTLDGHDFH-GESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLA 87 (136)
T ss_dssp EEBTTSCEEE-GGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEE
T ss_pred cccCCCCEee-HHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEE
Confidence 4455555555 333468899999999999999999999999999988 78999999853
Q ss_pred --cHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 91 --HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 91 --~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+..++++|++.++|++++++ +|+.. ++.|..+.+.+.+++.+.+
T Consensus 88 d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 88 DTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp CTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred cCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 56789999999999999996 55545 8999999999988887764
No 217
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.44 E-value=2.2e-13 Score=98.98 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=74.0
Q ss_pred CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHH
Q 015217 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (411)
Q Consensus 179 ~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (411)
.+.++.||++||++|+.+.+.+.++++.+.+++.+..+|++.+..++++||+.++|++++ +|. . ++.|..+.+.+
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~--~-~~~G~~~~~~l 77 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGD--V-EFIGAPTKEAL 77 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTE--E-ECCSSSSSHHH
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCE--E-eeecCCCHHHH
Confidence 467999999999999999999999999999889999999999999999999999999998 333 3 78898899999
Q ss_pred HHHHHHH
Q 015217 259 ESFALEQ 265 (411)
Q Consensus 259 ~~fi~~~ 265 (411)
.+++.+.
T Consensus 78 ~~~l~~~ 84 (85)
T 1fo5_A 78 VEAIKKR 84 (85)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 218
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.44 E-value=2.8e-13 Score=116.54 Aligned_cols=104 Identities=20% Similarity=0.271 Sum_probs=87.8
Q ss_pred CCCcEEe-CccchHHHHhcCC--CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 159 SNESIEL-NSSNFDELVLKSK--DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~~~--~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
...+..+ +..+|.+.+.... ++++|.||++||++|+.+.+.|.+++..+. .+.|+.||++ ++.++++|+|..+|+
T Consensus 98 ~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~~~l~~~~~i~~~PT 175 (217)
T 2trc_P 98 YGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-NTGAGDRFSSDVLPT 175 (217)
T ss_dssp CCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-HHTCSTTSCGGGCSE
T ss_pred CCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-cHHHHHHCCCCCCCE
Confidence 4568888 8889998776554 799999999999999999999999999985 7999999998 778999999999999
Q ss_pred EEEEcCCCCCcccccCCCC-------HHHHHHHHHHH
Q 015217 236 ILVFGADKDSPIPYEGART-------AGAIESFALEQ 265 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~~~-------~~~i~~fi~~~ 265 (411)
+++|++|. ....+.|..+ .+.|..|+.++
T Consensus 176 l~~~~~G~-~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 176 LLVYKGGE-LISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp EEEEETTE-EEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred EEEEECCE-EEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 99998654 3556777554 38888888765
No 219
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.43 E-value=8e-13 Score=105.09 Aligned_cols=106 Identities=17% Similarity=0.371 Sum_probs=84.6
Q ss_pred CCCcEEeCc-cchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeC----CCchhHHhhCc
Q 015217 159 SNESIELNS-SNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDC----DSEKSLMSKFN 229 (411)
Q Consensus 159 ~~~v~~l~~-~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~----~~~~~l~~~~~ 229 (411)
.+.+..+++ .++...+.+ .+++++|.||++||++|+.+.+.+ .++++.+.+ +.++.||+ +....++++|+
T Consensus 10 ~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~ 88 (134)
T 2fwh_A 10 HLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN 88 (134)
T ss_dssp CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT
T ss_pred CCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC
Confidence 344554544 555555543 367999999999999999999999 899999875 99999999 44668999999
Q ss_pred cccccEEEEEcCCCCCc--ccccCCCCHHHHHHHHHHH
Q 015217 230 VQGFPTILVFGADKDSP--IPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~--~~y~g~~~~~~i~~fi~~~ 265 (411)
|.++|++++|..+++.. .++.|..+.++|.+++.+.
T Consensus 89 v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 89 VLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp CCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 99999999995444433 5789999999999998765
No 220
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.43 E-value=8.6e-14 Score=131.50 Aligned_cols=99 Identities=23% Similarity=0.413 Sum_probs=84.9
Q ss_pred CCCCcEEeCccchHHHHhcC-CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC--------CeEEEEEeCCCchhHHhhC
Q 015217 158 DSNESIELNSSNFDELVLKS-KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--------KVKLGHVDCDSEKSLMSKF 228 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~-~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~--------~~~f~~v~~~~~~~l~~~~ 228 (411)
....+..++..+|.+.+... .++++|.||++||++|+.+.|.|.++++.+.. .+.|+.||++.+..++++|
T Consensus 21 ~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y 100 (470)
T 3qcp_A 21 LDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKY 100 (470)
T ss_dssp TCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHT
T ss_pred CCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHc
Confidence 45779999999999876433 46899999999999999999999999999972 5999999999999999999
Q ss_pred ccccccEEEEEcCC-CCCcccccCCCCHH
Q 015217 229 NVQGFPTILVFGAD-KDSPIPYEGARTAG 256 (411)
Q Consensus 229 ~v~~~P~i~~~~~~-~~~~~~y~g~~~~~ 256 (411)
+|..+|++++|+++ ......|.|..+.+
T Consensus 101 ~V~~~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 101 DINFVPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp TCCSSCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred CCCccCeEEEEECCCceEEEEeeCCCCHH
Confidence 99999999999654 34577888875544
No 221
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.43 E-value=2.2e-13 Score=109.68 Aligned_cols=97 Identities=14% Similarity=0.304 Sum_probs=80.0
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC-CCeEEEEEeccc---------------------
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANE--------------------- 90 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~i~~~~vd~~~--------------------- 90 (411)
..++.+.+. ... ++++++|.||++||++|+.+.+.+.++.+.++ .++.++.|+++.
T Consensus 21 ~~~~g~~~~-l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~ 98 (145)
T 3erw_A 21 KTIEGEDIS-IPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPI 98 (145)
T ss_dssp ECTTSCEEE-ESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCE
T ss_pred ecCCCCEEe-HHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeE
Confidence 334444444 222 78899999999999999999999999999998 479999999864
Q ss_pred ----cHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHH
Q 015217 91 ----HQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFA 131 (411)
Q Consensus 91 ----~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~ 131 (411)
+..+++.|++.++|+++++ ++|+.+.++.|..+.+.+.+++
T Consensus 99 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 99 VLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp EECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred EEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 5689999999999999999 5566677889999988887775
No 222
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.43 E-value=4e-13 Score=106.67 Aligned_cols=90 Identities=19% Similarity=0.393 Sum_probs=78.5
Q ss_pred cCCCeEEEEEeCCCChhhhhhhHHHH--HHHHHhcCCeEEEEEeC---CCchhHHhhCcc---ccccEEEEEcCCCCCcc
Q 015217 176 KSKDLWIVEFFAPWCGHCKKLAPEWK--KAANNLKGKVKLGHVDC---DSEKSLMSKFNV---QGFPTILVFGADKDSPI 247 (411)
Q Consensus 176 ~~~~~~lv~f~~~~c~~c~~~~~~~~--~~a~~~~~~~~f~~v~~---~~~~~l~~~~~v---~~~P~i~~~~~~~~~~~ 247 (411)
..+++++|.||++||++|+.+.+.|. +++..+.+++.++.||+ +.+..++++|+| .++|++++|..+++...
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~ 106 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRY 106 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEE
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEE
Confidence 45789999999999999999999999 99999977899999999 889999999999 99999999955555456
Q ss_pred cccC-------CCCHHHHHHHHHHH
Q 015217 248 PYEG-------ARTAGAIESFALEQ 265 (411)
Q Consensus 248 ~y~g-------~~~~~~i~~fi~~~ 265 (411)
.+.| ..+.+++.+|+.+.
T Consensus 107 ~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 107 TTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp ECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EecCCcccccccCCHHHHHHHHHHh
Confidence 6666 56888999998764
No 223
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.43 E-value=7.6e-14 Score=110.35 Aligned_cols=108 Identities=23% Similarity=0.457 Sum_probs=91.0
Q ss_pred CCCCcEEeC-ccchHHHHhc---CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccc
Q 015217 158 DSNESIELN-SSNFDELVLK---SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGF 233 (411)
Q Consensus 158 ~~~~v~~l~-~~~~~~~~~~---~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~ 233 (411)
....+..++ ..++.+.+.. .+++++|.||++||++|+.+.+.+.++++.+. .+.|+.||++.+..++++|++..+
T Consensus 12 ~~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~ 90 (130)
T 1wmj_A 12 EEGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDELKEVAEKYNVEAM 90 (130)
T ss_dssp SCSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTTSGGGHHHHTCCSS
T ss_pred cCcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccchHHHHHHcCCCcc
Confidence 445677774 5778877655 47799999999999999999999999999987 699999999999999999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
|++++|++|. ....+.| .+.+.+.+++.+.+..
T Consensus 91 Pt~~~~~~g~-~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 91 PTFLFIKDGA-EADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CCCCBCTTTT-CCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred ceEEEEeCCe-EEEEEeC-CCHHHHHHHHHHHHhc
Confidence 9999996554 3566777 5788999999888753
No 224
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.43 E-value=2.9e-13 Score=98.33 Aligned_cols=82 Identities=15% Similarity=0.271 Sum_probs=73.7
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHH
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIE 259 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~ 259 (411)
..++.||++||++|+.+.+.+.++++.+.+++.+..+|++.+..++++||+.++|++++ +|. . ++.|..+.+.+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~--~-~~~G~~~~~~l~ 77 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGV--V-RFVGAPSREELF 77 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTT--E-EEECSSCCHHHH
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCE--E-EEccCCCHHHHH
Confidence 45899999999999999999999999999889999999999999999999999999998 333 3 788988999999
Q ss_pred HHHHHHh
Q 015217 260 SFALEQL 266 (411)
Q Consensus 260 ~fi~~~~ 266 (411)
+++.+.+
T Consensus 78 ~~l~~~l 84 (85)
T 1nho_A 78 EAINDEM 84 (85)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 9998764
No 225
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.41 E-value=5.9e-13 Score=104.13 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=83.7
Q ss_pred CcEEeCccchHHHHhc-CCCeEEEEEeCC-------CChhhhhhhHHHHHHHHHhcCCeEEEEEeC-------CCchhHH
Q 015217 161 ESIELNSSNFDELVLK-SKDLWIVEFFAP-------WCGHCKKLAPEWKKAANNLKGKVKLGHVDC-------DSEKSLM 225 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~-~~~~~lv~f~~~-------~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-------~~~~~l~ 225 (411)
.+...+.++|.+.+.. .+++++|.||++ ||++|+.+.|.+.++++.+.+++.|+.||+ +.+..++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 4566777888887655 478999999999 999999999999999999988899999999 7788999
Q ss_pred hhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 015217 226 SKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 226 ~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
++|+|.++|++++|+++. ....+.| .+.+.|.+|+.
T Consensus 86 ~~~~i~~~Pt~~~~~~~~-~~~g~~~-~~~~~l~~~i~ 121 (123)
T 1wou_A 86 KNLKVTAVPTLLKYGTPQ-KLVESEC-LQANLVEMLFS 121 (123)
T ss_dssp HHHCCCSSSEEEETTSSC-EEEGGGG-GCHHHHHHHHH
T ss_pred HHCCCCeeCEEEEEcCCc-eEecccc-CCHHHHHHHHh
Confidence 999999999999997633 2333333 56778888775
No 226
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.40 E-value=6.1e-13 Score=109.36 Aligned_cols=104 Identities=17% Similarity=0.266 Sum_probs=79.9
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHH-H--HHHHHHhCCCeEEEEEeccccHhHHHhc--------CC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPI-W--EKAATVLKGVATVAALDANEHQSLAQEY--------GI 100 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~-~--~~~~~~~~~~i~~~~vd~~~~~~~~~~~--------~i 100 (411)
....+++.|. .+..++++++|.||++||++|+.+.+. + .++++.+.+++.+++||.++.+++.+.| |+
T Consensus 24 W~~~~~ea~~-~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv 102 (173)
T 3ira_A 24 WYPWGEEAFE-KARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGR 102 (173)
T ss_dssp CBCSSHHHHH-HHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCcCHHHHH-HHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCC
Confidence 3445567777 667789999999999999999999993 3 5777777778999999999999999888 99
Q ss_pred CcccEEEEEe-CCCCCcc--c---CCCCCcchhHHHHHHHHH
Q 015217 101 RGFPTIKVFV-PGKPPVD--Y---QGARDVKPIAEFALQQIK 136 (411)
Q Consensus 101 ~~~P~~~~~~-~g~~~~~--~---~g~~~~~~l~~~~~~~~~ 136 (411)
.++|+++++. +|+.+.. | .+..+.+.+.+++.+..+
T Consensus 103 ~g~Pt~v~l~~dG~~v~~~ty~p~~~~~~~~~f~~~L~~v~~ 144 (173)
T 3ira_A 103 GGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKE 144 (173)
T ss_dssp CCSSEEEEECTTSCEEEEESSCCSSCBTTBCCHHHHHHHHHH
T ss_pred CCCcceeeECCCCCceeeeeeCCCCcCCCCCCHHHHHHHHHH
Confidence 9999999997 5654332 2 123345667777765543
No 227
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.40 E-value=9.9e-13 Score=114.60 Aligned_cols=105 Identities=20% Similarity=0.218 Sum_probs=86.0
Q ss_pred CCCcEEe-CccchHHHHhcC--CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccE
Q 015217 159 SNESIEL-NSSNFDELVLKS--KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPT 235 (411)
Q Consensus 159 ~~~v~~l-~~~~~~~~~~~~--~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~ 235 (411)
...+..+ +..+|.+.+... +++++|.||++||++|+.+.|.|.++|..+.+ +.|+.||++. ..++++|+|..+|+
T Consensus 111 ~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~-~~l~~~~~I~~~PT 188 (245)
T 1a0r_P 111 YGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN-TGAGDRFSSDVLPT 188 (245)
T ss_dssp CCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH-HCCTTSSCTTTCSE
T ss_pred CCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc-HHHHHHCCCCCCCE
Confidence 4568888 688999877543 67999999999999999999999999999975 9999999876 67899999999999
Q ss_pred EEEEcCCCCCcccccCC-------CCHHHHHHHHHHHh
Q 015217 236 ILVFGADKDSPIPYEGA-------RTAGAIESFALEQL 266 (411)
Q Consensus 236 i~~~~~~~~~~~~y~g~-------~~~~~i~~fi~~~~ 266 (411)
+++|++|.. ...+.|. ++.+.|..|+.++-
T Consensus 189 ll~~~~G~~-v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 189 LLVYKGGEL-LSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp EEEEETTEE-EEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred EEEEECCEE-EEEEeCCcccccccccHHHHHHHHHHcC
Confidence 999986542 3344442 45678888887764
No 228
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.40 E-value=4.9e-13 Score=95.17 Aligned_cols=74 Identities=20% Similarity=0.317 Sum_probs=63.0
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCC-CcchhHH
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGAR-DVKPIAE 129 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~-~~~~l~~ 129 (411)
..|.||++||++|+.+.|.++++++.+.+++.++.+| +.+++++|||.++|++++ +|+.+.+ |.. +.+.+.+
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~ 74 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKK 74 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHH
Confidence 4689999999999999999999999998889999998 788999999999999887 6654333 876 7777776
Q ss_pred HH
Q 015217 130 FA 131 (411)
Q Consensus 130 ~~ 131 (411)
++
T Consensus 75 ~l 76 (77)
T 1ilo_A 75 IL 76 (77)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 229
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.40 E-value=1.5e-11 Score=120.40 Aligned_cols=181 Identities=13% Similarity=0.133 Sum_probs=138.8
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCC-CcccCCCCCc
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKP-PVDYQGARDV 124 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~-~~~~~g~~~~ 124 (411)
.-.+++.+.++...|..|+++...+++++.. .++|.+...+ .. . ...|++.+.++|+. -++|.|-...
T Consensus 16 ~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~--~~-~-------~~~p~~~~~~~~~~~~i~f~g~p~g 84 (521)
T 1hyu_A 16 KLTKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN--TL-P-------VRKPSFLITNPGSQQGPRFAGSPLG 84 (521)
T ss_dssp TCCSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT--TS-S-------SCSSEEEEECTTCCCSCEEESCCCG
T ss_pred hCCCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC--Cc-c-------cCCCEEEEecCCCcceEEEeccCcc
Confidence 3456777777778899999999999988765 4567764322 11 0 56799999877643 6899999999
Q ss_pred chhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHH
Q 015217 125 KPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAA 204 (411)
Q Consensus 125 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a 204 (411)
.++..|+...+.. ......++++.+........+..++.|+++||++|+.+.+.+.+++
T Consensus 85 ~e~~s~~~~l~~~---------------------~~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a 143 (521)
T 1hyu_A 85 HEFTSLVLALLWT---------------------GGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMA 143 (521)
T ss_dssp GGHHHHHHHHHHH---------------------TTCCCCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhh---------------------cCCCCCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHH
Confidence 9999999877531 2233456666666543234567899999999999999999999999
Q ss_pred HHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 205 NNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 205 ~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
..+. ++.+..+|.+..++++++|+|.++|++++ ++. . ...|..+.+.|.+|+..
T Consensus 144 ~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~--~-~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 144 VLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NGK--E-FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp HHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTE--E-EEESCCCHHHHHHHHCC
T ss_pred hHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CCE--E-EecCCCCHHHHHHHHhh
Confidence 9976 79999999999999999999999999987 332 2 24588888999988744
No 230
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.40 E-value=7.3e-13 Score=107.04 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=82.2
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccHh--------------
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQS-------------- 93 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~~-------------- 93 (411)
+..+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.++++ +.++.|+++.+++
T Consensus 13 ~~~l~~~~g~~~~-l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 91 (148)
T 3hcz_A 13 NLYMTDTTGTYRY-LYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGW 91 (148)
T ss_dssp CCCCBCTTSCBCC-GGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTS
T ss_pred ceEEecCCCCEEE-hHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCc
Confidence 3444555555555 33347899999999999999999999999999999874 9999999997766
Q ss_pred -----------HHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHH
Q 015217 94 -----------LAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 94 -----------~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++.|++.++|+++++ ++|+...++.|..+.+.+++.+.+.
T Consensus 92 ~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 92 LNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp EEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHH
T ss_pred eEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHH
Confidence 9999999999999999 4566677777775555555555443
No 231
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.39 E-value=8.2e-13 Score=107.31 Aligned_cols=101 Identities=16% Similarity=0.272 Sum_probs=82.3
Q ss_pred EeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------
Q 015217 34 QLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------- 90 (411)
Q Consensus 34 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~---------------------- 90 (411)
.++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ ++.++.|+++.
T Consensus 13 ~~~g~~~~-l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~ 91 (151)
T 2f9s_A 13 DTNGKRIE-LSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDT 91 (151)
T ss_dssp CTTCCEEE-GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEET
T ss_pred cCCCCEEE-HHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECC
Confidence 34444444 2223689999999999999999999999999999986 58999999875
Q ss_pred cHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 91 HQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 91 ~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+..+++.|++.++|+++++ .+|+.+.++.|..+.+.+.+++.+.+
T Consensus 92 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 92 DRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp TSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred chHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 3478999999999999999 56766777889989888888888765
No 232
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.38 E-value=1.7e-12 Score=105.53 Aligned_cols=104 Identities=15% Similarity=0.279 Sum_probs=85.7
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccccH-----------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQ----------------- 92 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~~----------------- 92 (411)
.+..++++.+. ....++++++|.||++||++|+...+.+.++.+.+++ ++.++.|+++...
T Consensus 14 ~l~~~~g~~~~-l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~ 92 (152)
T 2lja_A 14 SYPDINGKTVS-LADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQL 92 (152)
T ss_dssp EEEETTTEEEE-STTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEE
T ss_pred EeecCCCCEee-HHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCcee
Confidence 34455555444 2233688999999999999999999999999999987 5999999998764
Q ss_pred ------hHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 93 ------SLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 93 ------~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+++.|++.++|+++++. +|+.+.++.|..+.+.+.+++.+..
T Consensus 93 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 93 HMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELL 142 (152)
T ss_dssp ECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHH
T ss_pred ecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHh
Confidence 789999999999999997 6776777888889999999888765
No 233
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.38 E-value=1.7e-12 Score=105.39 Aligned_cols=90 Identities=18% Similarity=0.299 Sum_probs=77.5
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc------------------------cHhHHHhcC-
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE------------------------HQSLAQEYG- 99 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~------------------------~~~~~~~~~- 99 (411)
-++++++|.||++||++|+...|.+.++.+.+++ ++.++.|+++. ...+++.||
T Consensus 22 ~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (151)
T 3raz_A 22 LKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGN 101 (151)
T ss_dssp CCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTC
T ss_pred hCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCC
Confidence 3689999999999999999999999999999864 69999999863 345788899
Q ss_pred -CCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 100 -IRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 100 -i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+.++|+++++. +|+...++.|..+.+.+.+++.+..
T Consensus 102 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 102 TVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp CSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 99999999995 5666788999999999998888765
No 234
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.38 E-value=1e-12 Score=107.99 Aligned_cols=96 Identities=13% Similarity=0.092 Sum_probs=73.8
Q ss_pred EeCccchhHHHh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcC---CCcccEEEEE
Q 015217 34 QLTPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYG---IRGFPTIKVF 109 (411)
Q Consensus 34 ~l~~~~f~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~---i~~~P~~~~~ 109 (411)
.++++.+. .+. .++++++|.||++||++|+.+.|.++++++.++ ++.+..||.+++++++.+|+ +.++|+++++
T Consensus 40 ~~~~~~~~-~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~ 117 (167)
T 1z6n_A 40 GLPSALTE-RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVL 117 (167)
T ss_dssp CCCHHHHH-HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEE
T ss_pred CCCHHHHH-HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEE
Confidence 45555554 333 357899999999999999999999999998875 68999999999999999997 9999999999
Q ss_pred eCC-CCCcccCCCCCcchhHHHHHH
Q 015217 110 VPG-KPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 110 ~~g-~~~~~~~g~~~~~~l~~~~~~ 133 (411)
++| +.+.++ |.. +..+...+.+
T Consensus 118 ~~~G~~~~~~-g~~-p~~~~~~i~~ 140 (167)
T 1z6n_A 118 DEEFNLLGRF-VER-PQAVLDGGPQ 140 (167)
T ss_dssp CTTCCEEEEE-ESS-CHHHHHHCHH
T ss_pred CCCCCEEEEE-cCC-CHHHHHhHHH
Confidence 886 434444 443 3444444443
No 235
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.36 E-value=3.3e-12 Score=103.88 Aligned_cols=104 Identities=20% Similarity=0.291 Sum_probs=83.6
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEec----------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDA---------------------- 88 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~---------------------- 88 (411)
+..++++.+. ....++++++|.||++||++|+...+.+.++.+.+++ ++.++.|+.
T Consensus 13 l~~~~g~~~~-l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~ 91 (153)
T 2l5o_A 13 LPDLHGKTVS-NADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVM 91 (153)
T ss_dssp EECTTSCEEE-HHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEE
T ss_pred eecCCCCCcc-HHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEE
Confidence 3444555554 2233689999999999999999999999999999986 477776653
Q ss_pred -cccHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 89 -NEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 89 -~~~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
+.+..+++.|++.++|+++++ .+|+.+.++.|..+.+.+.+++.+.++
T Consensus 92 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 141 (153)
T 2l5o_A 92 YDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR 141 (153)
T ss_dssp ECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHH
T ss_pred cCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 446689999999999999999 567767789999999999999887763
No 236
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.36 E-value=2e-12 Score=102.80 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=79.4
Q ss_pred EeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec-------------------------
Q 015217 34 QLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA------------------------- 88 (411)
Q Consensus 34 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~------------------------- 88 (411)
..+++.+. ...-++++++|.||++||++|+...+.+.++.+.+++++.++.+++
T Consensus 9 ~~~g~~~~-l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (138)
T 4evm_A 9 GVDGKTYR-LSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLP 87 (138)
T ss_dssp BTTSCEEE-GGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCC
T ss_pred CCCCCEEE-HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCee
Confidence 33444444 2233689999999999999999999999999999777888888853
Q ss_pred ---cccHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHH
Q 015217 89 ---NEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 89 ---~~~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
+.+..++++|++.++|+++++ ++|+...++.|..+.+.+.+++.+
T Consensus 88 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 88 VLVDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp EEECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred EEECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 334579999999999999999 567667788999998888887764
No 237
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.36 E-value=1.1e-12 Score=98.09 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=79.2
Q ss_pred CcEEeCc-cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchh----HHhhCcccc-cc
Q 015217 161 ESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKS----LMSKFNVQG-FP 234 (411)
Q Consensus 161 ~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~----l~~~~~v~~-~P 234 (411)
....+++ ++|.+ +.+.+++++|+|+++||++|+.+.+.|++++.. +++.|+.||.+..+. ++++|||.+ .|
T Consensus 7 ~~~~i~s~e~f~~-ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sP 83 (112)
T 3iv4_A 7 VAIKLSSIDQFEQ-VIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESP 83 (112)
T ss_dssp CEEECCSHHHHHH-HHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSS
T ss_pred ceeecCCHHHHHH-HHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCC
Confidence 3556655 55666 455688999999999999999999999999985 579999999998866 799999995 99
Q ss_pred EEEEEcCCCCCcccccCCCCHHHHHHH
Q 015217 235 TILVFGADKDSPIPYEGARTAGAIESF 261 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (411)
++++|++|......-.+..+...|.+.
T Consensus 84 q~il~k~G~~v~~~SH~~I~~~~l~~~ 110 (112)
T 3iv4_A 84 QAFYFVNGEMVWNRDHGDINVSSLAQA 110 (112)
T ss_dssp EEEEEETTEEEEEEEGGGCSHHHHHHH
T ss_pred eEEEEECCEEEEEeeccccCHHHHHHh
Confidence 999999887544445567788777654
No 238
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.36 E-value=2.1e-12 Score=104.02 Aligned_cols=88 Identities=13% Similarity=0.080 Sum_probs=65.0
Q ss_pred HHhcCCCeEEEEEECCCChhhhhhhHHHHHH---HHHhCCCeEEEEEecc-ccHhHHHhcCCCcccEEEEEe-CCCCCcc
Q 015217 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKA---ATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTIKVFV-PGKPPVD 117 (411)
Q Consensus 43 ~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~---~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~P~~~~~~-~g~~~~~ 117 (411)
.+..++++++|.|||+||++|+.+.|.+.+. ..... ..|+.|+++ +..+++.++++.++|++++|+ +|+.+.+
T Consensus 39 ~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~--~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~ 116 (151)
T 3ph9_A 39 YAQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQ--NKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRAD 116 (151)
T ss_dssp HHHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHH--HTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTT
T ss_pred HHHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhh--cCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEE
Confidence 4556799999999999999999999988764 22222 234455554 345678899999999999998 7887888
Q ss_pred cCCC-------CCcchhHHHHH
Q 015217 118 YQGA-------RDVKPIAEFAL 132 (411)
Q Consensus 118 ~~g~-------~~~~~l~~~~~ 132 (411)
..|. ...+.+.+.+.
T Consensus 117 ~~G~~~~~~~~~~~~~~~~ll~ 138 (151)
T 3ph9_A 117 IAGRYSNRLYTYEPRDLPLLIE 138 (151)
T ss_dssp CCCSCTTSTTCCCGGGHHHHHH
T ss_pred EeCCcCCcccccchhhHHHHHH
Confidence 8887 55555544443
No 239
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.36 E-value=4.2e-12 Score=104.05 Aligned_cols=105 Identities=17% Similarity=0.202 Sum_probs=83.8
Q ss_pred CCcEE-eCccchhHHHhcCCCeEEEEEECCCChhhhh-hhHHHHHHHHHhCC-CeEEEEEec------------------
Q 015217 30 SPVVQ-LTPNNFKSKVLNANGVVLVEFYAPWCGHCQA-LTPIWEKAATVLKG-VATVAALDA------------------ 88 (411)
Q Consensus 30 ~~~~~-l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~-~~~~~~~~~~~~~~-~i~~~~vd~------------------ 88 (411)
..... ++++.+. ...-++++++|.||++||++|+. ..|.+.++.+.+++ ++.++.|++
T Consensus 12 ~~~~~~~~g~~~~-l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~ 90 (160)
T 3lor_A 12 LDVQEWVNHEGLS-NEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFID 90 (160)
T ss_dssp CCEEEESSSCCCC-HHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHH
T ss_pred cccccccCCCccC-HHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHH
Confidence 33444 4555555 33346899999999999999999 59999999999986 489999986
Q ss_pred ----------cccHh------HHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 89 ----------NEHQS------LAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 89 ----------~~~~~------~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+.... ++++|++.++|+++++. +|+...++.|..+.+.+.+.+.+.+
T Consensus 91 ~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 91 EFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp HTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHH
T ss_pred HcCCCCcEEECCccccchhhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 22334 89999999999999996 5766778889999888888888765
No 240
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.34 E-value=5.1e-12 Score=103.35 Aligned_cols=105 Identities=14% Similarity=0.214 Sum_probs=82.2
Q ss_pred CCcEEe--CccchhHHHhcCCCeEEEEEECCCChhhhhh-hHHHHHHHHHhCC-CeEEEEEecc----------------
Q 015217 30 SPVVQL--TPNNFKSKVLNANGVVLVEFYAPWCGHCQAL-TPIWEKAATVLKG-VATVAALDAN---------------- 89 (411)
Q Consensus 30 ~~~~~l--~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~-~i~~~~vd~~---------------- 89 (411)
..+..+ +++.+. ...-++++++|.||++||++|+.. .|.+.++.+.+++ ++.++.|+++
T Consensus 9 f~l~~~~~~g~~~~-l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~ 87 (158)
T 3eyt_A 9 LQIQQWFNSATDLT-LADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFL 87 (158)
T ss_dssp CCEEEEESCSSCCC-TGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHH
T ss_pred ceehhhhcCCCccC-HHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHH
Confidence 344453 334444 333368999999999999999996 9999999999985 6899888863
Q ss_pred ------------ccH-----hHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 90 ------------EHQ-----SLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 90 ------------~~~-----~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
... .+++.|++.++|+++++. +|+...++.|..+.+.+.+.+.+.+
T Consensus 88 ~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 88 HEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp HHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHh
Confidence 122 589999999999999985 5666778889999888888888765
No 241
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.34 E-value=2.5e-12 Score=106.45 Aligned_cols=108 Identities=17% Similarity=0.241 Sum_probs=83.2
Q ss_pred CCCcEEe--CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEe-------------------
Q 015217 29 SSPVVQL--TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD------------------- 87 (411)
Q Consensus 29 ~~~~~~l--~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd------------------- 87 (411)
+..+..+ +++.+....+.++++++|.||++||++|+.+.|.+.++.+. ++.++.|+
T Consensus 30 ~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~ 106 (168)
T 2b1k_A 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPY 106 (168)
T ss_dssp CCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCC
T ss_pred CeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCC
Confidence 3444555 55555533345789999999999999999999999999876 46777777
Q ss_pred ----ccccHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHHHHH
Q 015217 88 ----ANEHQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIKALL 139 (411)
Q Consensus 88 ----~~~~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~~~~ 139 (411)
++.+..++++|++.++|+++++. +|+...++.|..+.+.+.+++.+.++...
T Consensus 107 ~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~~~ 163 (168)
T 2b1k_A 107 ALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYS 163 (168)
T ss_dssp SEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHHHHHH
T ss_pred ceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 34556789999999999766664 56666788899999999999888876554
No 242
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.33 E-value=5.2e-13 Score=110.05 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=82.8
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEe----------------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALD---------------------- 87 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd---------------------- 87 (411)
.+..++++.+. ....++++++|.||++||++|+.+.|.+.++++.++. .+.++.|+
T Consensus 22 ~l~~~~g~~~~-~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPAS-VYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGG-GGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEee-HHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 56677777777 4455789999999999999999999999999988643 35554444
Q ss_pred ------ccccHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 88 ------ANEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 88 ------~~~~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++.+.+++++|++.++|+++++ ++|+.+.++.|..+.+.+.+++.+.+
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred CcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3445689999999999999999 56766777889999888888887543
No 243
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.32 E-value=4.3e-12 Score=105.47 Aligned_cols=105 Identities=14% Similarity=0.192 Sum_probs=82.4
Q ss_pred EEeCccchHHHHh---cCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCCCchhH------------
Q 015217 163 IELNSSNFDELVL---KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSEKSL------------ 224 (411)
Q Consensus 163 ~~l~~~~~~~~~~---~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~~~l------------ 224 (411)
...+..++.+.+. ..+++++|.||++||++|+.+.+.+ .++.+.+.+++.++.||++....+
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 3445566666543 4578999999999999999974444 666666665799999999876654
Q ss_pred --------------HhhCccccccEEEEEcCCCCCcccccCCCC-HHHHHHHHHHHhh
Q 015217 225 --------------MSKFNVQGFPTILVFGADKDSPIPYEGART-AGAIESFALEQLE 267 (411)
Q Consensus 225 --------------~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~-~~~i~~fi~~~~~ 267 (411)
+++|++.++|+++++..+++...++.|..+ .+.+.+++.+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTGLE 166 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHHHH
Confidence 789999999999999666665677889888 9999999988764
No 244
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.32 E-value=6.1e-12 Score=102.24 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=76.8
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc---------------------
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE--------------------- 90 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~--------------------- 90 (411)
..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++.
T Consensus 15 ~~~~G~~~~-l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d 93 (152)
T 2lrn_A 15 IDLKGNSVS-LNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLL 93 (152)
T ss_dssp ECSSSCEEE-SGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEE
T ss_pred EcCCCCEEe-HHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEec
Confidence 334444443 2223688999999999999999999999999999987 49999999986
Q ss_pred ----cHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 91 ----HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 91 ----~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
...+++.|++.++|+++++. +|+.+.++ .+.+.+.+++.+.+
T Consensus 94 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~ 140 (152)
T 2lrn_A 94 QKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFV 140 (152)
T ss_dssp CHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHH
T ss_pred ccchhHHHHHHhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHH
Confidence 57899999999999999994 56544444 35567777777654
No 245
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.32 E-value=4e-12 Score=102.65 Aligned_cols=103 Identities=14% Similarity=0.191 Sum_probs=78.1
Q ss_pred CCCcEEeCccchhHHH--hcCCCeEEEEEECCCChhhhhhhHHHHHHHHHh-CC-CeEEEEEeccc--------------
Q 015217 29 SSPVVQLTPNNFKSKV--LNANGVVLVEFYAPWCGHCQALTPIWEKAATVL-KG-VATVAALDANE-------------- 90 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~--~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~-~~-~i~~~~vd~~~-------------- 90 (411)
+..+..++++.+. .. .-++++++|.||++||++|+...|.+.++.+.+ .+ .+.++.|+++.
T Consensus 13 ~~~l~~~~g~~~~-l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~ 91 (148)
T 3fkf_A 13 YFSLPNEKGEKLS-RSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTL 91 (148)
T ss_dssp CCCEEBTTSCEEC-TTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTC
T ss_pred CeEeeCCCCCEEe-ccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCC
Confidence 3344445555444 22 236899999999999999999999999999999 66 48999998886
Q ss_pred -----------cHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 91 -----------HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 91 -----------~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
...+++.|++.++|+++++. +|+...++. +.+.+.+++.+.+
T Consensus 92 ~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll 145 (148)
T 3fkf_A 92 SWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI---QGEALTGKLKELL 145 (148)
T ss_dssp CSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHC
T ss_pred CceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHHHHH
Confidence 44899999999999999995 555444433 6777777776654
No 246
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.31 E-value=4.4e-12 Score=103.46 Aligned_cols=97 Identities=18% Similarity=0.317 Sum_probs=77.9
Q ss_pred cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-----------------------ccHhH
Q 015217 38 NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-----------------------EHQSL 94 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~-----------------------~~~~~ 94 (411)
+.+. .....+++++|.||++||++|+.+.|.+.++.+. +++.++.|+++ ....+
T Consensus 33 ~~~~-l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 109 (156)
T 1kng_A 33 PGLD-PAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRA 109 (156)
T ss_dssp CCBC-GGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHH
T ss_pred ceec-hHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHH
Confidence 5555 3334588999999999999999999999998876 56888887764 34578
Q ss_pred HHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHHHH
Q 015217 95 AQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKA 137 (411)
Q Consensus 95 ~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~~~ 137 (411)
++.|++.++|+++++ .+|+...++.|..+.+.+.+++.+.++.
T Consensus 110 ~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 153 (156)
T 1kng_A 110 SIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQMEK 153 (156)
T ss_dssp HHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHHH
T ss_pred HHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 899999999977777 5666677788999999999888877653
No 247
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.31 E-value=2.5e-12 Score=96.42 Aligned_cols=77 Identities=14% Similarity=0.165 Sum_probs=68.1
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHH
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAE 129 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~ 129 (411)
+.++.||++||++|+.+.+.+++++..+. +.+..+|+++++++..+||++ +|+++++.+|+.+ ..|..+.+.|.+
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~ 104 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGA 104 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHH
Confidence 67999999999999999999999998864 889999999999999999997 9999989888753 457788888887
Q ss_pred HH
Q 015217 130 FA 131 (411)
Q Consensus 130 ~~ 131 (411)
|+
T Consensus 105 ~L 106 (107)
T 2fgx_A 105 YL 106 (107)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 248
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.30 E-value=1.3e-11 Score=100.16 Aligned_cols=99 Identities=23% Similarity=0.443 Sum_probs=78.4
Q ss_pred CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccccH----------------------
Q 015217 36 TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANEHQ---------------------- 92 (411)
Q Consensus 36 ~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~~~---------------------- 92 (411)
+++.+. ....++++++|.||++||++|+...+.+.++.+.+++. +.++.|+++.+.
T Consensus 17 ~g~~~~-l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~ 95 (152)
T 3gl3_A 17 KTGVVK-LSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKG 95 (152)
T ss_dssp SSSEEE-GGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTC
T ss_pred CCCeEe-HHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcc
Confidence 444444 22336889999999999999999999999999999874 899999988655
Q ss_pred hHHHhcCCCcccEEEEE-eCCCCCcccCCCCCc--chhHHHHHHHH
Q 015217 93 SLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDV--KPIAEFALQQI 135 (411)
Q Consensus 93 ~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~--~~l~~~~~~~~ 135 (411)
.+++.|++.++|+++++ .+|+.+.++.|.... +.+.+++.+.+
T Consensus 96 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAAL 141 (152)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHT
T ss_pred hhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHH
Confidence 68889999999999888 456656677776544 57777777654
No 249
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.30 E-value=1.2e-11 Score=103.89 Aligned_cols=104 Identities=18% Similarity=0.315 Sum_probs=81.8
Q ss_pred cEEe--CccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-e------EEEEEeccc-cHhHHHhc---
Q 015217 32 VVQL--TPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-A------TVAALDANE-HQSLAQEY--- 98 (411)
Q Consensus 32 ~~~l--~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i------~~~~vd~~~-~~~~~~~~--- 98 (411)
+..+ +.+.+. ...-++++++|.||++||++|+...|.+.++.+.++++ + .++.|+++. .++.+++|
T Consensus 42 l~~~~~~g~~~~-l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~ 120 (183)
T 3lwa_A 42 GDSLMEEGTQIN-LSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTD 120 (183)
T ss_dssp EEBSSSTTCEEE-GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHH
T ss_pred ccccccCCcEec-HHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHH
Confidence 4445 555554 33346899999999999999999999999999998764 7 999999998 66666665
Q ss_pred ----------------------CCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 99 ----------------------GIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 99 ----------------------~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
++.++|+++++. +|+...++.|..+.+.+.+++.+.++
T Consensus 121 ~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 181 (183)
T 3lwa_A 121 NGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLVD 181 (183)
T ss_dssp TTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred cCCCccEEECCcchHHHHhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHh
Confidence 689999877774 56667788999999999999887763
No 250
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.28 E-value=5.3e-12 Score=102.81 Aligned_cols=103 Identities=16% Similarity=0.231 Sum_probs=83.3
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec--------------------
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-------------------- 88 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~-------------------- 88 (411)
+..+..++++.+. ...-+ ++++|.||++||++|+...+.+.++.+.+ ++.++.|++
T Consensus 13 ~f~l~~~~g~~~~-l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~ 88 (154)
T 3ia1_A 13 DFLLLDPKGQPVT-PATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFI 88 (154)
T ss_dssp CCCEECTTSCEEC-TTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEE
T ss_pred ceEEECCCCCEec-hHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCc
Confidence 3444555555554 22234 89999999999999999999999999999 688888888
Q ss_pred -------cccHhHHHhcCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 89 -------NEHQSLAQEYGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 89 -------~~~~~~~~~~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+....+++.|++.++|+++++ ++|+.+.++.|..+.+.+.+++.+..
T Consensus 89 ~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 89 PLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAG 143 (154)
T ss_dssp ECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTT
T ss_pred ccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhcc
Confidence 366789999999999998888 45766778899999999999888764
No 251
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.94 E-value=3.5e-13 Score=106.53 Aligned_cols=94 Identities=15% Similarity=0.198 Sum_probs=79.3
Q ss_pred hcCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCC--CchhHHhhCccccccEEEEEcC-CCCC--c
Q 015217 175 LKSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGFPTILVFGA-DKDS--P 246 (411)
Q Consensus 175 ~~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~--~~~~l~~~~~v~~~P~i~~~~~-~~~~--~ 246 (411)
...+++++|.||++||++|+.+.+.+ .++++.+.+++.++.||++ ....++++|+|.++|++++|.. ++.. .
T Consensus 16 ~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~ 95 (130)
T 2lst_A 16 QAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEV 95 (130)
Confidence 45567999999999999999999999 9999998888999999984 5578999999999999999953 3443 4
Q ss_pred ccccCCCCHHHHHHHHHHHhhh
Q 015217 247 IPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 247 ~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
.++.|..+.+.+.+++.+.+..
T Consensus 96 ~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 96 GRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 6788988889999998887653
No 252
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.27 E-value=6.1e-11 Score=104.18 Aligned_cols=148 Identities=13% Similarity=0.194 Sum_probs=97.8
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhCC-Ce-EEEEEecccc----------------------HhHHHhcCC
Q 015217 47 ANGVVLVEFY-APWCGHCQ-ALTPIWEKAATVLKG-VA-TVAALDANEH----------------------QSLAQEYGI 100 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~-~~~~~~~~~~~~~~~-~i-~~~~vd~~~~----------------------~~~~~~~~i 100 (411)
++++++|.|| ++||++|. ...|.+.++.+.+++ .+ .++.|+.+.. ..+++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 6789999999 99999999 999999999988864 57 7888876531 246677776
Q ss_pred C-----------cccEEEEEeCCCCCcccCCCCCc------chhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcE
Q 015217 101 R-----------GFPTIKVFVPGKPPVDYQGARDV------KPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESI 163 (411)
Q Consensus 101 ~-----------~~P~~~~~~~g~~~~~~~g~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 163 (411)
. ..|+.+++++|+....+.|.... ....+.+. .+ ...
T Consensus 112 ~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~~~~~~~~~~~~~~~il~-~l----------------------~~~--- 165 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLK-YL----------------------APQ--- 165 (241)
T ss_dssp EEECTTTTCCEEECCEEEEEETTEEEEEEECCSCSSCCCSSSSHHHHHH-HH----------------------CTT---
T ss_pred eeecccccCcccceeEEEEEECCEEEEEEEeccCCCccceecCHHHHHH-Hh----------------------hhh---
Confidence 5 23665555666554444444322 22222222 11 000
Q ss_pred EeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc---hhHHhhCccccccEEEE
Q 015217 164 ELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---KSLMSKFNVQGFPTILV 238 (411)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~~l~~~~~v~~~P~i~~ 238 (411)
. .....+++|..+||+.|+.....+.+.. +.+-.+|.+.+ ..+.+.+|...+|++++
T Consensus 166 ----------~--i~~~~i~ly~~~~Cp~C~~a~~~L~~~~------i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~ 225 (241)
T 1nm3_A 166 ----------H--QVQESISIFTKPGCPFCAKAKQLLHDKG------LSFEEIILGHDATIVSVRAVSGRTTVPQVFI 225 (241)
T ss_dssp ----------S--CCCCCEEEEECSSCHHHHHHHHHHHHHT------CCCEEEETTTTCCHHHHHHHTCCSSSCEEEE
T ss_pred ----------c--cccceEEEEECCCChHHHHHHHHHHHcC------CceEEEECCCchHHHHHHHHhCCCCcCEEEE
Confidence 0 1233477889999999999998887642 44555665543 34777899999999865
No 253
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.27 E-value=1.6e-11 Score=101.19 Aligned_cols=102 Identities=15% Similarity=0.287 Sum_probs=79.6
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc------------------ccH
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------EHQ 92 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~------------------~~~ 92 (411)
.+..++.+.+. ....++++++|.||++||++|+...|.+.++.+.++ ++.++.|+++ ...
T Consensus 21 ~l~~~~g~~~~-l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~ 98 (165)
T 3ha9_A 21 SLTTIDGEVIS-LNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTP 98 (165)
T ss_dssp CEEBTTSCEEC-GGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCH
T ss_pred EeecCCCCEee-HHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCH
Confidence 34455555554 333468999999999999999999999999999998 8999999987 342
Q ss_pred ----------------------hHHHhcCCCcccEEEEEeCCCCCcccCCCC-CcchhHHHHHHHH
Q 015217 93 ----------------------SLAQEYGIRGFPTIKVFVPGKPPVDYQGAR-DVKPIAEFALQQI 135 (411)
Q Consensus 93 ----------------------~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~-~~~~l~~~~~~~~ 135 (411)
.+++.|++.++|+++++..++.+.. .|.. +.+.+.+.+.+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 99 EMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 7899999999999999965444333 7777 7888888776543
No 254
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.27 E-value=2.3e-12 Score=93.30 Aligned_cols=73 Identities=15% Similarity=0.224 Sum_probs=61.9
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHH
Q 015217 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFA 131 (411)
Q Consensus 52 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~ 131 (411)
++.||++||++|+.+.|.+++++..+ +..||++++++++++||++ +|++++ .+|+.+. |..+.+.|.+++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l 72 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWL 72 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHH
Confidence 78999999999999999998876432 6889999999999999998 999887 7776542 778888888888
Q ss_pred HHH
Q 015217 132 LQQ 134 (411)
Q Consensus 132 ~~~ 134 (411)
.+.
T Consensus 73 ~~~ 75 (87)
T 1ttz_A 73 DAA 75 (87)
T ss_dssp HTC
T ss_pred HHH
Confidence 654
No 255
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.26 E-value=1.8e-11 Score=99.54 Aligned_cols=97 Identities=10% Similarity=0.080 Sum_probs=75.6
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccccHh---------------
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQS--------------- 93 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~~~--------------- 93 (411)
..+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++...+
T Consensus 18 f~l~~~~G~~~~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~ 96 (152)
T 2lrt_A 18 IQLKDLKGNTRS-LTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVR 96 (152)
T ss_dssp CCEEBTTSCEEC-TTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEE
T ss_pred eEEEcCCCCEEe-HHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEE
Confidence 344445554444 2223578999999999999999999999999999987 49999999986653
Q ss_pred --------HHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchh
Q 015217 94 --------LAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPI 127 (411)
Q Consensus 94 --------~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l 127 (411)
+++.|++.++|++++++ +|+.+.++.|..+.+..
T Consensus 97 d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~ 139 (152)
T 2lrt_A 97 DANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLDEA 139 (152)
T ss_dssp CSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHHH
T ss_pred CCCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHHHH
Confidence 88999999999999995 56667777777665443
No 256
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.25 E-value=2.4e-11 Score=98.78 Aligned_cols=103 Identities=22% Similarity=0.363 Sum_probs=79.8
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecccc-------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEH------------------- 91 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~------------------- 91 (411)
+..++++.+. ....++++++|.||++||++|+...+.+.++.+.+++ ++.++.|+++.+
T Consensus 13 l~~~~g~~~~-l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~ 91 (154)
T 3kcm_A 13 LNTLNGEVVK-LSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVL 91 (154)
T ss_dssp EECTTSCEEE-GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEE
T ss_pred EEcCCCCEEe-hhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEE
Confidence 4444555554 3333689999999999999999999999999999987 689999998865
Q ss_pred ----HhHHHhcCCCcccEEEEEe-CCCCCcccCCCC--CcchhHHHHHHHH
Q 015217 92 ----QSLAQEYGIRGFPTIKVFV-PGKPPVDYQGAR--DVKPIAEFALQQI 135 (411)
Q Consensus 92 ----~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~--~~~~l~~~~~~~~ 135 (411)
..+++.|++.++|+++++. +|+.+.++.|.. +.+.+.+++.+..
T Consensus 92 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 92 LDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp ECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC-
T ss_pred ecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHH
Confidence 3488999999999877774 566566777775 5557777776543
No 257
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.24 E-value=2.2e-11 Score=99.62 Aligned_cols=101 Identities=20% Similarity=0.366 Sum_probs=78.3
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC-CCeEEEEEeccc------------------
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANE------------------ 90 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~i~~~~vd~~~------------------ 90 (411)
..+..++++.+. ....++++++|.||++||++|+...+.+.++.+.++ .++.++.|+++.
T Consensus 24 f~l~~~~g~~~~-l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d 102 (158)
T 3hdc_A 24 FKLPTLSGENKS-LAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSD 102 (158)
T ss_dssp CEEECTTSCEEE-SGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEEC
T ss_pred ceeEcCCCCEEe-hHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEEC
Confidence 334455555554 333468899999999999999999999999999998 479999999987
Q ss_pred -cHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcc--hhHHHH
Q 015217 91 -HQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVK--PIAEFA 131 (411)
Q Consensus 91 -~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~--~l~~~~ 131 (411)
+..+++.|++.++|+++++. +|+...++.|..+.+ ++++.+
T Consensus 103 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~ 147 (158)
T 3hdc_A 103 ATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYL 147 (158)
T ss_dssp TTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHH
T ss_pred chHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHH
Confidence 67899999999999988884 566567777765543 444444
No 258
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.24 E-value=3.9e-11 Score=96.47 Aligned_cols=83 Identities=19% Similarity=0.256 Sum_probs=68.0
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC--CCeEEEEEecccc-----------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH----------------- 91 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd~~~~----------------- 91 (411)
.+..++++.+. ...-++++++|.||++||++|+.+.|.+.++++.++ +++.++.|+++..
T Consensus 12 ~l~~~~g~~~~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 90 (144)
T 1i5g_A 12 NVLKGAAADIA-LPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 90 (144)
T ss_dssp EEEETTEEEEE-GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECC
T ss_pred EEEcCCCCEec-HHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccc
Confidence 45556666655 333468899999999999999999999999999998 4788888988753
Q ss_pred -------HhHHHhcCCCcccEEEEEe--CCCC
Q 015217 92 -------QSLAQEYGIRGFPTIKVFV--PGKP 114 (411)
Q Consensus 92 -------~~~~~~~~i~~~P~~~~~~--~g~~ 114 (411)
..++++|++.++|+++++. +|+.
T Consensus 91 ~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 91 FEDRKGMEFLTTGFDVKSIPTLVGVEADSGNI 122 (144)
T ss_dssp TTCHHHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred cCchHHHHHHHHHcCCCCCCEEEEEECCCCcE
Confidence 5789999999999999997 4553
No 259
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.24 E-value=2.5e-11 Score=98.77 Aligned_cols=91 Identities=19% Similarity=0.312 Sum_probs=76.2
Q ss_pred cCCCeEEEEEe-CCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCCCch-----------hHHhhCccccccEEEEEc
Q 015217 176 KSKDLWIVEFF-APWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSEK-----------SLMSKFNVQGFPTILVFG 240 (411)
Q Consensus 176 ~~~~~~lv~f~-~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~~-----------~l~~~~~v~~~P~i~~~~ 240 (411)
..+++++|.|| ++||++|+.+.+.+ .++++.+...+.++.+|++... .++++|+|..+|+++++.
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d 124 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFID 124 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEEC
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEc
Confidence 34789999999 99999999999999 7887776667999999987653 899999999999999996
Q ss_pred CCCCCcccccCCC--CHHHHHHHHHHHhh
Q 015217 241 ADKDSPIPYEGAR--TAGAIESFALEQLE 267 (411)
Q Consensus 241 ~~~~~~~~y~g~~--~~~~i~~fi~~~~~ 267 (411)
.++....++ |.. +.+.+.+++.+.+.
T Consensus 125 ~~G~~~~~~-G~~~~~~~~l~~~l~~~l~ 152 (154)
T 2ju5_A 125 AEGKQLARM-GFEPGGGAAYVSKVKSALK 152 (154)
T ss_dssp TTCCEEEEE-CCCTTCHHHHHHHHHHHHT
T ss_pred CCCCEEEEe-cCCCCCHHHHHHHHHHHHh
Confidence 555556666 877 88999999887653
No 260
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.23 E-value=6.1e-11 Score=96.03 Aligned_cols=104 Identities=11% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCCcEEeCccchhHHH--hcCCCeEEEEEECCCChh--hhhhhHHHHHHHHHh-CC-CeEEEEEeccccH----------
Q 015217 29 SSPVVQLTPNNFKSKV--LNANGVVLVEFYAPWCGH--CQALTPIWEKAATVL-KG-VATVAALDANEHQ---------- 92 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~--~~~~~~~~v~f~~~~C~~--C~~~~~~~~~~~~~~-~~-~i~~~~vd~~~~~---------- 92 (411)
+..+..++++.+. .. .-++++++|.||++||++ |+...|.+.++.+.+ ++ .+.++.|+++..+
T Consensus 13 ~f~l~~~~g~~~~-l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~ 91 (150)
T 3fw2_A 13 FFSLPNAKGEKIT-RSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRD 91 (150)
T ss_dssp CCCEEBTTCCEEC-TTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHT
T ss_pred ccEeECCCCCEEe-cchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHh
Confidence 3444455555544 22 236899999999999999 999999999999999 65 4899999888654
Q ss_pred ---------------hHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 93 ---------------SLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 93 ---------------~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
.+++.|++.++|++++++ +|+...++. +.+.+.+.+.+.++
T Consensus 92 ~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ll~ 148 (150)
T 3fw2_A 92 TLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---RGEELKKKIENIVE 148 (150)
T ss_dssp TCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHHHHHH
T ss_pred CCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---CHHHHHHHHHHHHh
Confidence 789999999999999995 455444442 66777777776653
No 261
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.23 E-value=1.8e-11 Score=98.12 Aligned_cols=100 Identities=20% Similarity=0.335 Sum_probs=73.3
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHH---HHHHhCC-CeEEEEEeccccHhH-------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEK---AATVLKG-VATVAALDANEHQSL------------- 94 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~---~~~~~~~-~i~~~~vd~~~~~~~------------- 94 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.+ +.+.+++ .+.++.|+++.+.+.
T Consensus 12 l~~~~g~~~~-l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~ 90 (142)
T 3ewl_A 12 YVTVHGDNSR-MSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWI 90 (142)
T ss_dssp EECTTCCEEE-GGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCE
T ss_pred EECCCCCEEE-hhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcc
Confidence 3344444444 223368999999999999999999999988 8888764 589999988865543
Q ss_pred -----------HHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 95 -----------AQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 95 -----------~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++.|++.++|++++++..+. +.+ +..+.+.+.+++.+.
T Consensus 91 ~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~-i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 91 VGWNKAGDIRTRQLYDIRATPTIYLLDGRKR-VIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp EEECTTCHHHHTTCSCCCSSSEEEEECTTCB-EEE-CSCCHHHHHHHHHC-
T ss_pred eeeCCccchhhHHHcCCCCCCeEEEECCCCC-EEe-cCCCHHHHHHHHHHH
Confidence 34899999999999964333 233 457777888877654
No 262
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.23 E-value=9.6e-11 Score=94.37 Aligned_cols=104 Identities=18% Similarity=0.240 Sum_probs=85.5
Q ss_pred EEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-----------------------
Q 015217 163 IELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD----------------------- 219 (411)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~----------------------- 219 (411)
..++...+... ...+++++|.||++||++|+...+.+.++++.+.+++.|..|+++
T Consensus 15 ~~~~g~~~~~~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2b5x_A 15 AWLNGEVTREQ-LIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQP 93 (148)
T ss_dssp EEESCCCCHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSC
T ss_pred ccccCcccchh-hcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcc
Confidence 45666666543 235678999999999999999999999999999888999999854
Q ss_pred ----CchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 220 ----SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 220 ----~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+..+++.|++..+|+++++..++.....+.|..+.+.+.+++.+.+.
T Consensus 94 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 94 IFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp EEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred eEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 355799999999999999996666556667888889999999988764
No 263
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.22 E-value=3.6e-11 Score=100.23 Aligned_cols=104 Identities=16% Similarity=0.259 Sum_probs=80.9
Q ss_pred CcEEeCc--cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec--------------------
Q 015217 31 PVVQLTP--NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-------------------- 88 (411)
Q Consensus 31 ~~~~l~~--~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~-------------------- 88 (411)
.+..+++ +.+. ...-++++++|.||++||++|+...|.+.++.+. ++.++.|++
T Consensus 40 ~l~~~~g~~~~~~-l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~ 115 (176)
T 3kh7_A 40 DLPSVQDPARRLT-EADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLL 115 (176)
T ss_dssp EEEBSSCTTSEEE-GGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSE
T ss_pred EecccCCCCceec-HHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCce
Confidence 3444444 3444 3334589999999999999999999999999886 477777775
Q ss_pred ---cccHhHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHHHH
Q 015217 89 ---NEHQSLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIKAL 138 (411)
Q Consensus 89 ---~~~~~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~~~ 138 (411)
+.+..+++.|++.++|+++++. +|+...++.|..+.+.+.+++.+.++..
T Consensus 116 ~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~l 169 (176)
T 3kh7_A 116 SISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQQL 169 (176)
T ss_dssp EEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHHHH
T ss_pred EEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 3445788999999999888885 5665778889999999999988887644
No 264
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.22 E-value=1.2e-11 Score=94.00 Aligned_cols=87 Identities=16% Similarity=0.163 Sum_probs=68.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-----eEEEEEeCCCc--hhHHhhCccccccEEEEEcCCCCCcccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-----VKLGHVDCDSE--KSLMSKFNVQGFPTILVFGADKDSPIPY 249 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-----~~f~~v~~~~~--~~l~~~~~v~~~P~i~~~~~~~~~~~~y 249 (411)
+....+|.||++||++|+.+.+. ++..+... +.+..||.+.+ ..++.+|+|.++||+++|++|. +..+.
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~-ev~Ri 92 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDV-ESGRL 92 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTE-EEEEE
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCE-EEeee
Confidence 34689999999999999999863 33334332 67788887765 5789999999999999999554 46788
Q ss_pred cCCCCHHHHHHHHHHHhh
Q 015217 250 EGARTAGAIESFALEQLE 267 (411)
Q Consensus 250 ~g~~~~~~i~~fi~~~~~ 267 (411)
.|....+.+..|+.+.+.
T Consensus 93 ~G~~~~~~f~~~L~~~l~ 110 (116)
T 3dml_A 93 EGYPGEDFFWPMLARLIG 110 (116)
T ss_dssp ECCCCHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHh
Confidence 999999999999988764
No 265
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.21 E-value=6.6e-11 Score=93.88 Aligned_cols=88 Identities=18% Similarity=0.339 Sum_probs=76.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC----------------------chhHHhhCcccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS----------------------EKSLMSKFNVQGFP 234 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~----------------------~~~l~~~~~v~~~P 234 (411)
.+++++|.||++||++|+...+.+.++++.+. .+.+..|+++. +..+++.|++..+|
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P 101 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQP 101 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSS
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCC
Confidence 45789999999999999999999999999998 89999999876 57899999999999
Q ss_pred EEEEEcCCCCCccccc---CCCCHHHHHHHHHHHh
Q 015217 235 TILVFGADKDSPIPYE---GARTAGAIESFALEQL 266 (411)
Q Consensus 235 ~i~~~~~~~~~~~~y~---g~~~~~~i~~fi~~~~ 266 (411)
+++++..++... .+. |..+.+.+.+++.+.+
T Consensus 102 ~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 102 AFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp EEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred EEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 999996655544 788 8899999999987653
No 266
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.20 E-value=6.2e-11 Score=95.50 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=66.3
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC--CCeEEEEEecccc-----------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH----------------- 91 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd~~~~----------------- 91 (411)
.+..+++ .+. ...-++++++|+||++||++|+.+.|.+.++++.++ +++.++.|+++..
T Consensus 13 ~l~~~~g-~~~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 90 (146)
T 1o8x_A 13 KLRRGDG-EVE-VKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVP 90 (146)
T ss_dssp EEEETTE-EEE-GGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECC
T ss_pred EEEcCCC-CCc-HHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeec
Confidence 3445555 544 233368899999999999999999999999999998 4788888888753
Q ss_pred -------HhHHHhcCCCcccEEEEEe--CCCC
Q 015217 92 -------QSLAQEYGIRGFPTIKVFV--PGKP 114 (411)
Q Consensus 92 -------~~~~~~~~i~~~P~~~~~~--~g~~ 114 (411)
..++++|+|.++|+++++. +|+.
T Consensus 91 ~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 91 FAQSEAVQKLSKHFNVESIPTLIGVDADSGDV 122 (146)
T ss_dssp GGGHHHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred cchhhHHHHHHHHhCCCCCCEEEEEECCCCeE
Confidence 4789999999999999997 5653
No 267
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.19 E-value=7.1e-11 Score=100.26 Aligned_cols=101 Identities=14% Similarity=0.109 Sum_probs=79.2
Q ss_pred EeCccchhHHHhcCCC-eEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecc----------------------
Q 015217 34 QLTPNNFKSKVLNANG-VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDAN---------------------- 89 (411)
Q Consensus 34 ~l~~~~f~~~~~~~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~---------------------- 89 (411)
.++.+.+..... +++ +++|.||++||++|+...|.+.++.+.+.+ ++.++.|+++
T Consensus 32 ~~~G~~~~l~~~-~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~ 110 (196)
T 2ywi_A 32 VIDGNVVRLEDV-KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGY 110 (196)
T ss_dssp TTTCCEEEHHHH-CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTC
T ss_pred cCCCCEEeHHHh-CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCC
Confidence 455555552223 455 699999999999999999999999999986 4899999984
Q ss_pred -------ccHhHHHhcCCCcccEEEEEe-CCCCCcc---------cCCCCCcchhHHHHHHHH
Q 015217 90 -------EHQSLAQEYGIRGFPTIKVFV-PGKPPVD---------YQGARDVKPIAEFALQQI 135 (411)
Q Consensus 90 -------~~~~~~~~~~i~~~P~~~~~~-~g~~~~~---------~~g~~~~~~l~~~~~~~~ 135 (411)
.+..+++.|++.++|+++++. +|+...+ +.|..+.+.+.+.+.+.+
T Consensus 111 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 111 PFPYLYDETQEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp CSCEEECSSCHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred CceEEECCchHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHH
Confidence 345789999999999999995 5654444 457778888888888765
No 268
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.19 E-value=8.7e-11 Score=94.31 Aligned_cols=69 Identities=22% Similarity=0.450 Sum_probs=60.1
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC--CCeEEEEEecccc------------------------HhHHHhcC
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLK--GVATVAALDANEH------------------------QSLAQEYG 99 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~--~~i~~~~vd~~~~------------------------~~~~~~~~ 99 (411)
-++++++|.||++||++|+.+.|.+.++++.++ +++.++.|+++.. ..++++|+
T Consensus 26 ~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (144)
T 1o73_A 26 LVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG 105 (144)
T ss_dssp GTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT
T ss_pred hCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC
Confidence 368899999999999999999999999999997 4688888888753 46899999
Q ss_pred CCcccEEEEEe--CCCC
Q 015217 100 IRGFPTIKVFV--PGKP 114 (411)
Q Consensus 100 i~~~P~~~~~~--~g~~ 114 (411)
+.++|++++++ +|+.
T Consensus 106 v~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 106 VESIPTLITINADTGAI 122 (144)
T ss_dssp CCSSSEEEEEETTTCCE
T ss_pred CCCCCEEEEEECCCCeE
Confidence 99999999998 4543
No 269
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.19 E-value=8.7e-11 Score=99.02 Aligned_cols=103 Identities=13% Similarity=0.117 Sum_probs=77.3
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc----------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN---------------------- 89 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~---------------------- 89 (411)
+..++++.+. ...-++++++|.||++||++|+...+.+.++.+.+.+++.++.|+++
T Consensus 18 l~~~~G~~~~-l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~ 96 (188)
T 2cvb_A 18 LPDPRGGRYR-LSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGI 96 (188)
T ss_dssp EECTTSCEEE-GGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTC
T ss_pred eecCCCCEEe-HHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCC
Confidence 3344444444 22336799999999999999999999999999999877889999883
Q ss_pred -------ccHhHHHhcCCCcccEEEEEeC-CCCCcc--------cCCCCCcchhHHHHHHHH
Q 015217 90 -------EHQSLAQEYGIRGFPTIKVFVP-GKPPVD--------YQGARDVKPIAEFALQQI 135 (411)
Q Consensus 90 -------~~~~~~~~~~i~~~P~~~~~~~-g~~~~~--------~~g~~~~~~l~~~~~~~~ 135 (411)
.+..+++.|++.++|+++++.. |+...+ +.|..+.+.+.+.+.+.+
T Consensus 97 ~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll 158 (188)
T 2cvb_A 97 FFPYLLDETQEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALL 158 (188)
T ss_dssp CSCEEECSSSHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHH
T ss_pred CceEEECCcchHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHH
Confidence 3457899999999999999954 543332 223346778888887665
No 270
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.19 E-value=2.2e-11 Score=92.15 Aligned_cols=75 Identities=19% Similarity=0.421 Sum_probs=62.1
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC------CchhHHhhCccccccEEEEEcCCCCCcccccC
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEG 251 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g 251 (411)
.++.+|.||++||++|+.+.|.|.++++.+. .|+++ .+..++++|+|.++|++++ +|. .|.|
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~----~~~G 79 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR----TYTG 79 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE----EEES
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE----EecC
Confidence 3456899999999999999999999997764 46666 5778999999999999877 322 4899
Q ss_pred CCCHHHHHHHHHH
Q 015217 252 ARTAGAIESFALE 264 (411)
Q Consensus 252 ~~~~~~i~~fi~~ 264 (411)
..+.+.|.+|+..
T Consensus 80 ~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 80 VRSLEALAVASGY 92 (106)
T ss_dssp CCCHHHHHHHHTC
T ss_pred CCCHHHHHHHhCC
Confidence 9999999988743
No 271
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.18 E-value=5.3e-11 Score=84.41 Aligned_cols=74 Identities=14% Similarity=0.287 Sum_probs=62.7
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCC-CHHHHH
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGAR-TAGAIE 259 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~-~~~~i~ 259 (411)
..|.||++||++|+.+.+.+.++++.+..++.++.+| +..++++||+.++|++++ +|. .... |.. +.+++.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~--~~~~-G~~~~~~~l~ 73 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGE--LKIM-GRVASKEEIK 73 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTE--EEEC-SSCCCHHHHH
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCE--EEEc-CCCCCHHHHH
Confidence 3578999999999999999999999998889999988 788999999999999998 332 3333 887 888888
Q ss_pred HHH
Q 015217 260 SFA 262 (411)
Q Consensus 260 ~fi 262 (411)
+++
T Consensus 74 ~~l 76 (77)
T 1ilo_A 74 KIL 76 (77)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 272
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.18 E-value=1.8e-11 Score=100.69 Aligned_cols=94 Identities=19% Similarity=0.247 Sum_probs=74.7
Q ss_pred hcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchh-HHhhCcc--ccccEEEEEcCCCCCcccccC
Q 015217 175 LKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKS-LMSKFNV--QGFPTILVFGADKDSPIPYEG 251 (411)
Q Consensus 175 ~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~-l~~~~~v--~~~P~i~~~~~~~~~~~~y~g 251 (411)
...+++++|.||++||++|+.+.|.|.++++.+...+.|+.|+++.++. ++..|++ ..+|++++|..++....++.|
T Consensus 43 ~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G 122 (164)
T 1sen_A 43 AASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIIN 122 (164)
T ss_dssp HHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCC
T ss_pred HhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeC
Confidence 4567899999999999999999999999887765557777788777666 7888888 569999999544444556677
Q ss_pred C----------CCHHHHHHHHHHHhhh
Q 015217 252 A----------RTAGAIESFALEQLET 268 (411)
Q Consensus 252 ~----------~~~~~i~~fi~~~~~~ 268 (411)
. .+.+.+.+++.+.+..
T Consensus 123 ~~~~~~~~~~~~~~~~l~~~l~~~l~~ 149 (164)
T 1sen_A 123 ENGNPSYKYFYVSAEQVVQGMKEAQER 149 (164)
T ss_dssp TTSCTTSTTCCCSHHHHHHHHHHHHHH
T ss_pred CCCccchhcccCCHHHHHHHHHHHHHh
Confidence 4 6788999998877643
No 273
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.18 E-value=8.5e-11 Score=96.84 Aligned_cols=78 Identities=17% Similarity=0.288 Sum_probs=64.4
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC--CeEEEEEecccc------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG--VATVAALDANEH------------------ 91 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~i~~~~vd~~~~------------------ 91 (411)
+..++. .+. ...-+++++||+||++||++|+.+.|.+.++++.+++ ++.++.|+++..
T Consensus 34 l~~~~g-~v~-l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~ 111 (165)
T 3s9f_A 34 LRKQAD-TAD-MDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPF 111 (165)
T ss_dssp EEETTE-EEC-SGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCT
T ss_pred eecCCC-ccc-HHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCccccc
Confidence 344444 444 2233689999999999999999999999999999985 688888888766
Q ss_pred ------HhHHHhcCCCcccEEEEEeC
Q 015217 92 ------QSLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 92 ------~~~~~~~~i~~~P~~~~~~~ 111 (411)
..+++.|+|.++|++++++.
T Consensus 112 ~~~~~~~~l~~~~~v~~~Pt~~lid~ 137 (165)
T 3s9f_A 112 ANRNIVEALTKKYSVESIPTLIGLNA 137 (165)
T ss_dssp TCHHHHHHHHHHTTCCSSSEEEEEET
T ss_pred CchhHHHHHHHHcCCCCCCEEEEEeC
Confidence 67999999999999999984
No 274
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.18 E-value=4.1e-11 Score=96.05 Aligned_cols=99 Identities=10% Similarity=0.091 Sum_probs=71.2
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHH---HHHHhCC-CeEEEEEeccccHh------------
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEK---AATVLKG-VATVAALDANEHQS------------ 93 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~---~~~~~~~-~i~~~~vd~~~~~~------------ 93 (411)
..+..++++.+. ...-++++++|.||++||++|+...|.+.+ +.+.+++ ++.++.|+.+...+
T Consensus 14 f~l~~~~g~~~~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~ 92 (142)
T 3eur_A 14 FTYTLDSGVKGT-LYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKE 92 (142)
T ss_dssp CEEEETTSCEEE-TTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTT
T ss_pred cEEEcCCCCEee-HHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccc
Confidence 334445554444 222357999999999999999999999999 8988864 68999999886633
Q ss_pred ------------HHHhcCCCcccEEEEEeC-CCCCcccCCCCCcchhHHHHH
Q 015217 94 ------------LAQEYGIRGFPTIKVFVP-GKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 94 ------------~~~~~~i~~~P~~~~~~~-g~~~~~~~g~~~~~~l~~~~~ 132 (411)
+++.|++.++|++++++. |+.+.+.. +.+.+.+++.
T Consensus 93 ~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 141 (142)
T 3eur_A 93 WTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLLKDA---TLQKVEQYLA 141 (142)
T ss_dssp SEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEEEEE---CHHHHHHHHH
T ss_pred cccccCccchhhhhhhcCCCcCCeEEEECCCCcEEecCC---CHHHHHHHHh
Confidence 477899999999999965 43333322 3455555553
No 275
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.17 E-value=1.4e-10 Score=97.53 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=79.6
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhC-CCeEEEEEecccc-----HhHHHhcCCC----
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLK-GVATVAALDANEH-----QSLAQEYGIR---- 101 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~-~~i~~~~vd~~~~-----~~~~~~~~i~---- 101 (411)
+..++++.+. ...-++++++|.||++||++|+...+.+.++.+.++ .++.++.|+++.. ..+++++++.
T Consensus 45 l~~~~G~~~~-l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~ 123 (186)
T 1jfu_A 45 FEDADGKPKK-LSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGY 123 (186)
T ss_dssp EECTTSCEEE-GGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCC
T ss_pred eEcCCCCEee-HHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCce
Confidence 3344444444 223368899999999999999999999999999998 4689999988865 5677777774
Q ss_pred -------------------cccEEEEEe-CCCCCcccCCCCC--cchhHHHHHHHH
Q 015217 102 -------------------GFPTIKVFV-PGKPPVDYQGARD--VKPIAEFALQQI 135 (411)
Q Consensus 102 -------------------~~P~~~~~~-~g~~~~~~~g~~~--~~~l~~~~~~~~ 135 (411)
++|+++++. +|+...++.|..+ .+.+.+++.+.+
T Consensus 124 ~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 124 FNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp EECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHH
T ss_pred EECCcchHHHHhccccccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHh
Confidence 899999994 5665667888765 677888887765
No 276
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.17 E-value=1.5e-10 Score=91.69 Aligned_cols=88 Identities=18% Similarity=0.268 Sum_probs=76.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC-----------------------chhHHhhCccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS-----------------------EKSLMSKFNVQGF 233 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~-----------------------~~~l~~~~~v~~~ 233 (411)
.+++++|.||++||++|+...+.+.++++.+. ++.+..|+++. +..+++.|++..+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~ 102 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQ 102 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSS
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCC
Confidence 45789999999999999999999999999998 79999999843 4678999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|+++++..++... .+.|..+.+.+.+++.+.+
T Consensus 103 P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 103 PAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp SEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred ceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 9999997666544 7889999999999988764
No 277
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.16 E-value=1e-10 Score=107.66 Aligned_cols=92 Identities=21% Similarity=0.212 Sum_probs=78.8
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc---------------------------cHhHHHh
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------------HQSLAQE 97 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~---------------------------~~~~~~~ 97 (411)
-+++++||.||++||++|+...|.+.++.+.+++ .+.++.|+++. +..++++
T Consensus 80 l~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ 159 (352)
T 2hyx_A 80 LRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTN 159 (352)
T ss_dssp GTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHH
T ss_pred hCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHH
Confidence 3589999999999999999999999999999986 58999998752 3578999
Q ss_pred cCCCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHHHHH
Q 015217 98 YGIRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQIKA 137 (411)
Q Consensus 98 ~~i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~~~ 137 (411)
|+|.++|+++++ ++|+.+.++.|..+.+.+.+++.+.+..
T Consensus 160 ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e 200 (352)
T 2hyx_A 160 YRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLND 200 (352)
T ss_dssp TTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHH
T ss_pred cCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 999999999888 4566677888988988898888887643
No 278
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.15 E-value=2.4e-10 Score=92.55 Aligned_cols=94 Identities=18% Similarity=0.400 Sum_probs=81.2
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCch-----------------------hHHhhCcccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEK-----------------------SLMSKFNVQG 232 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~-----------------------~l~~~~~v~~ 232 (411)
.+++++|.||++||++|+...+.+.++.+.+.+ .+.+..|+++... .+++.|++..
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 108 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLING 108 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCS
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCC
Confidence 457899999999999999999999999999987 4999999988764 6889999999
Q ss_pred ccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhcC
Q 015217 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETNV 270 (411)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~~ 270 (411)
+|+++++..++.....+.|..+.+.+.+++.+....+.
T Consensus 109 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~~ 146 (152)
T 2lja_A 109 IPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLEG 146 (152)
T ss_dssp SCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCCS
T ss_pred CCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhcccc
Confidence 99999998666556677788889999999998876543
No 279
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.15 E-value=1.5e-10 Score=92.90 Aligned_cols=86 Identities=22% Similarity=0.427 Sum_probs=75.1
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEeCCC-------------------------chhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDS-------------------------EKSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~-------------------------~~~l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++++.+. ..+.+..|+++. +..+++.|++
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 112 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHI 112 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCc
Confidence 56799999999999999999999999999998 469999998853 5689999999
Q ss_pred ccccEEEEEcCCCCCcccccCCCCHHHHHHHH
Q 015217 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFA 262 (411)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi 262 (411)
..+|+++++..++.....+.|..+.+.+.+++
T Consensus 113 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 113 ITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp CEESEEEEECTTCCEEEEEESCCCHHHHHHHH
T ss_pred CccCeEEEEcCCCcEEEEEcCCcCHHHHHHhh
Confidence 99999999976665567788999999988876
No 280
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=99.14 E-value=1.4e-10 Score=93.45 Aligned_cols=91 Identities=16% Similarity=0.212 Sum_probs=73.9
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEeccc--cHhHHHhcCCCcccEEEEEeC--CCCCcc
Q 015217 45 LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANE--HQSLAQEYGIRGFPTIKVFVP--GKPPVD 117 (411)
Q Consensus 45 ~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~~--~~~~~~~~~i~~~P~~~~~~~--g~~~~~ 117 (411)
..++++++|+||++||..|+.+.... .++++.++.++.+..+|.+. ...+.++|++.++|+++++.. |+.+.+
T Consensus 39 k~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~ 118 (153)
T 2dlx_A 39 QMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVE 118 (153)
T ss_dssp HHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEE
T ss_pred HHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeee
Confidence 45689999999999999999998765 66777776678888998874 356899999999999999965 445666
Q ss_pred cCCCCCcchhHHHHHHHHH
Q 015217 118 YQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 118 ~~g~~~~~~l~~~~~~~~~ 136 (411)
..| .+++.+++++.+.+.
T Consensus 119 ~~g-~~~~~fl~~L~~~l~ 136 (153)
T 2dlx_A 119 WHQ-LDVSSFLDQVTGFLG 136 (153)
T ss_dssp ESS-CCHHHHHHHHHHHHH
T ss_pred cCC-CCHHHHHHHHHHHHH
Confidence 666 899999888887764
No 281
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.14 E-value=8.1e-11 Score=88.15 Aligned_cols=77 Identities=14% Similarity=0.259 Sum_probs=67.3
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHH
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIE 259 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~ 259 (411)
..+++|+++||++|+.+.+.+.+++..+. +.|..+|.+.+++++++||+. +|++++|.++. .+ ..|.++.+.|.
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~--~v-~~g~~~~~~L~ 103 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDK--EL-CHYFLDSDVIG 103 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTE--EE-ECSSCCCHHHH
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCCHHHHHHhCCC-CceEEEEECCE--EE-EecCCCHHHHH
Confidence 56999999999999999999999999875 889999999999999999997 99999887654 22 45888888988
Q ss_pred HHH
Q 015217 260 SFA 262 (411)
Q Consensus 260 ~fi 262 (411)
+|+
T Consensus 104 ~~L 106 (107)
T 2fgx_A 104 AYL 106 (107)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 282
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.14 E-value=3.4e-10 Score=91.67 Aligned_cols=91 Identities=20% Similarity=0.334 Sum_probs=78.3
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC------------------------chhHHhhCc--
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS------------------------EKSLMSKFN-- 229 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~------------------------~~~l~~~~~-- 229 (411)
.+++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++. ...+++.||
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 467999999999999999999999999999965 59999999863 345778899
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+..+|+++++..++.....+.|..+.+.+.+++.+...
T Consensus 103 v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp SCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999997766667788999999999999987654
No 283
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.13 E-value=3.3e-10 Score=93.13 Aligned_cols=92 Identities=18% Similarity=0.428 Sum_probs=79.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCchhHHhhC---------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKSLMSKF--------------------------- 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~l~~~~--------------------------- 228 (411)
.+++++|.||++||++|+...+.+.++++.+.++ +.++.|+++.+...+++|
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 4679999999999999999999999999999885 999999998877776666
Q ss_pred ccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
++..+|+++++..++.....+.|..+.+.+.+++.+.+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8999999999976665567788999999999999888753
No 284
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.12 E-value=2.4e-10 Score=92.55 Aligned_cols=92 Identities=17% Similarity=0.356 Sum_probs=78.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------chhHHhhCccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------EKSLMSKFNVQGF 233 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------~~~l~~~~~v~~~ 233 (411)
.+++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++. +..+++.|++..+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 104 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPL 104 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCC
Confidence 457999999999999999999999999999987 58999988865 3478999999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
|+++++..++.....+.|..+.+.+.+++.+.+..
T Consensus 105 P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~ 139 (151)
T 2f9s_A 105 PTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPG 139 (151)
T ss_dssp CEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred CeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhh
Confidence 99999966665566778988999999999887643
No 285
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.10 E-value=3e-10 Score=91.33 Aligned_cols=92 Identities=13% Similarity=0.046 Sum_probs=64.9
Q ss_pred HhcCCCeEEEEEeCCCChhhhhhhHHHHHH---HHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCccccc
Q 015217 174 VLKSKDLWIVEFFAPWCGHCKKLAPEWKKA---ANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYE 250 (411)
Q Consensus 174 ~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~---a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~ 250 (411)
....+++++|.||++||++|+.+.+.+.+. ......++..+.+| ++...++.++++.++|++++|+.+++...+..
T Consensus 40 A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD-~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~ 118 (151)
T 3ph9_A 40 AQKSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLM-HETTDKNLSPDGQYVPRIMFVDPSLTVRADIA 118 (151)
T ss_dssp HHHHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEES-SCCSCGGGCTTCCCSSEEEEECTTSCBCTTCC
T ss_pred HHHcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEec-CCchhhHhhcCCCCCCEEEEECCCCCEEEEEe
Confidence 345688999999999999999999998764 23322244444444 23445788999999999999985555566777
Q ss_pred CC-------C---CHHHHHHHHHHHh
Q 015217 251 GA-------R---TAGAIESFALEQL 266 (411)
Q Consensus 251 g~-------~---~~~~i~~fi~~~~ 266 (411)
|. + +.+.+.+.+.+.+
T Consensus 119 G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 119 GRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp CSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CCcCCcccccchhhHHHHHHHHHHHH
Confidence 76 3 3455666666554
No 286
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.10 E-value=9.5e-11 Score=96.19 Aligned_cols=95 Identities=13% Similarity=0.143 Sum_probs=71.9
Q ss_pred eCccchHHHHhc-CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCc---cccccEEEEEc
Q 015217 165 LNSSNFDELVLK-SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFN---VQGFPTILVFG 240 (411)
Q Consensus 165 l~~~~~~~~~~~-~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~---v~~~P~i~~~~ 240 (411)
+++..+.. +.. ..++++|.||++||++|+...|.+.+++..+. ++.|..|+.+.+++++.+|+ +.++|++++++
T Consensus 41 ~~~~~~~~-l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~ 118 (167)
T 1z6n_A 41 LPSALTER-LQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKGRAEDDLRQRLALERIAIPLVLVLD 118 (167)
T ss_dssp CCHHHHHH-HHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEEC
T ss_pred CCHHHHHH-HHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEEC
Confidence 44444444 333 45789999999999999999999999999875 69999999888888999997 99999999998
Q ss_pred CCCCCcccccCCCCHHHHHHHHH
Q 015217 241 ADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 241 ~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
+++....++ |... ..+...+.
T Consensus 119 ~~G~~~~~~-g~~p-~~~~~~i~ 139 (167)
T 1z6n_A 119 EEFNLLGRF-VERP-QAVLDGGP 139 (167)
T ss_dssp TTCCEEEEE-ESSC-HHHHHHCH
T ss_pred CCCCEEEEE-cCCC-HHHHHhHH
Confidence 765533344 5443 34444443
No 287
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.09 E-value=3e-10 Score=92.23 Aligned_cols=89 Identities=20% Similarity=0.318 Sum_probs=78.4
Q ss_pred CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC---------------------------CCchhHHhhCccc
Q 015217 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC---------------------------DSEKSLMSKFNVQ 231 (411)
Q Consensus 179 ~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~---------------------------~~~~~l~~~~~v~ 231 (411)
++++|.||++||++|+...+.+.++++.+ .+.+..|++ +....+++.|++.
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 108 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVL 108 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBC
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCC
Confidence 78999999999999999999999999999 688888888 3667899999999
Q ss_pred cccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 232 GFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 232 ~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
.+|+++++..++.....+.|..+.+.+.++|.+.....
T Consensus 109 ~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 109 GQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred cccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 99999999766665677889999999999999886543
No 288
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.08 E-value=5.6e-10 Score=90.37 Aligned_cols=95 Identities=22% Similarity=0.422 Sum_probs=77.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCch----------------------hHHhhCccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEK----------------------SLMSKFNVQGF 233 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~----------------------~l~~~~~v~~~ 233 (411)
.+++++|.||++||++|+...+.+.++++.+.++ +.+..|+++.+. .+++.|++..+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 106 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGM 106 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCC
Confidence 4679999999999999999999999999999885 999999988655 67888999999
Q ss_pred cEEEEEcCCCCCcccccCC--CCHHHHHHHHHHHhhhcCC
Q 015217 234 PTILVFGADKDSPIPYEGA--RTAGAIESFALEQLETNVA 271 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~--~~~~~i~~fi~~~~~~~~~ 271 (411)
|+++++..++.....+.|. .+.+.+.++|.+.+.....
T Consensus 107 P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 107 PTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp SEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred CeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 9999997666555667774 3558999999988765443
No 289
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.08 E-value=9.4e-10 Score=89.15 Aligned_cols=93 Identities=23% Similarity=0.363 Sum_probs=78.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeC-----------------------CCchhHHhhCcccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDC-----------------------DSEKSLMSKFNVQG 232 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~-----------------------~~~~~l~~~~~v~~ 232 (411)
.+++++|.||++||++|+...+.+.++++.+.++ +.+..|+. +.+..+++.|++..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~ 106 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQV 106 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCc
Confidence 5679999999999999999999999999999874 77776653 34567999999999
Q ss_pred ccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
+|+++++..++.....|.|..+.+.+.+++.+.+...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~~ 143 (153)
T 2l5o_A 107 YPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRNS 143 (153)
T ss_dssp SSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHCC
T ss_pred cCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHhh
Confidence 9999999766665677889999999999999887643
No 290
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.08 E-value=6.1e-11 Score=105.36 Aligned_cols=71 Identities=24% Similarity=0.449 Sum_probs=59.2
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc------ccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCc
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDV 124 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~------~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~ 124 (411)
.+|+||++||++|+++.|.++++++.++ .+||+ +++++|++++|+++||+++ +|+ +|.|.++.
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~---~~~G~~~~ 268 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTGVRSL 268 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE---EEESCCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE---EecCCCCH
Confidence 4799999999999999999999986653 35555 3789999999999999654 664 49999999
Q ss_pred chhHHHHH
Q 015217 125 KPIAEFAL 132 (411)
Q Consensus 125 ~~l~~~~~ 132 (411)
+++.+|+.
T Consensus 269 ~~L~~~l~ 276 (291)
T 3kp9_A 269 EALAVASG 276 (291)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
Confidence 99998874
No 291
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.07 E-value=5.3e-10 Score=92.52 Aligned_cols=105 Identities=13% Similarity=0.106 Sum_probs=80.4
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChh-hhhhhHHHHHHHHHhC-----CCeEEEEEecccc--------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGH-CQALTPIWEKAATVLK-----GVATVAALDANEH-------------- 91 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~-----~~i~~~~vd~~~~-------------- 91 (411)
+...+++.+. ...-++++++|.||++||++ |+...|.+.++.+.++ .++.++.|+++..
T Consensus 11 l~~~~G~~~~-l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~ 89 (171)
T 2rli_A 11 LLDHRGRARC-KADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDF 89 (171)
T ss_dssp EEETTSCEEE-TTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTT
T ss_pred EEeCCCCEEe-HHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHc
Confidence 3344444443 22235789999999999998 9999999999999885 4688888888721
Q ss_pred --------------HhHHHhcCCCccc---------------EEEEEe-CCCCCcccCCCCCcchhHHHHHHHHHH
Q 015217 92 --------------QSLAQEYGIRGFP---------------TIKVFV-PGKPPVDYQGARDVKPIAEFALQQIKA 137 (411)
Q Consensus 92 --------------~~~~~~~~i~~~P---------------~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~~ 137 (411)
..+++.||+...| +++++. +|+...++.|..+.+.+.+.+.+.++.
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 90 HPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp CTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 2588899999888 777774 566677788988988999888887653
No 292
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.07 E-value=7e-10 Score=95.76 Aligned_cols=106 Identities=19% Similarity=0.225 Sum_probs=76.7
Q ss_pred CCCCcEEeCccchhHHHhcCCC-eEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEecc----------------
Q 015217 28 SSSPVVQLTPNNFKSKVLNANG-VVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDAN---------------- 89 (411)
Q Consensus 28 ~~~~~~~l~~~~f~~~~~~~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~---------------- 89 (411)
.+..+..++++.+. ...-.++ +++|.||++||++|+...|.+.++.+.++++ +.++.|+++
T Consensus 39 P~f~l~~~~G~~v~-l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~ 117 (218)
T 3u5r_E 39 ADFVLPDAGGNLFT-LAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAE 117 (218)
T ss_dssp CCCCEECTTCCEEC-GGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHH
T ss_pred CCcEeECCCCCEEe-HHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHH
Confidence 34445555665555 2223466 5999999999999999999999999999874 999999983
Q ss_pred -------------ccHhHHHhcCCCcccEEEEEeCCCCCcccCCC-----------CCcchhHHHHHHHH
Q 015217 90 -------------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGA-----------RDVKPIAEFALQQI 135 (411)
Q Consensus 90 -------------~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~-----------~~~~~l~~~~~~~~ 135 (411)
....+++.|++.++|++++++..+. +.|.|. .+.+.|.+.+.+.+
T Consensus 118 ~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~-i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 118 VKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERR-LVYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp HHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCB-EEEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred HHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCc-EEEeccccccccccccccCHHHHHHHHHHHH
Confidence 3567999999999999999954333 234432 34455666655543
No 293
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.06 E-value=3.4e-10 Score=91.15 Aligned_cols=90 Identities=14% Similarity=0.236 Sum_probs=75.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCchh-------------------------HHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKS-------------------------LMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~-------------------------l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++.+.+.++ +.+..|+++.+.. +++.|++
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i 109 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDI 109 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCc
Confidence 4679999999999999999999999999999886 9999999987766 8999999
Q ss_pred ccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
..+|+++++..++.....+.|..+.+.+.+.+.+.+
T Consensus 110 ~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~~l 145 (148)
T 3hcz_A 110 YATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEKSL 145 (148)
T ss_dssp CSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHHHh
Confidence 999999999766655666777766666666665543
No 294
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.06 E-value=1.6e-10 Score=83.49 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=62.0
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHH
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESF 261 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (411)
++.|+++||++|+.+.+.+.+++..+ +..||.+.+++++++||+. +|++++ .+|. .+. |.++.+.|.++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~--~v~--g~~~~~~L~~~ 71 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDDAALESAYGLR-VPVLRD-PMGR--ELD--WPFDAPRLRAW 71 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCC--EEE--SCCCHHHHHHH
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCE--EEe--CCCCHHHHHHH
Confidence 78999999999999999999877543 6789999999999999998 999988 5544 332 88899999999
Q ss_pred HHHHh
Q 015217 262 ALEQL 266 (411)
Q Consensus 262 i~~~~ 266 (411)
+.+.+
T Consensus 72 l~~~~ 76 (87)
T 1ttz_A 72 LDAAP 76 (87)
T ss_dssp HHTCC
T ss_pred HHHHH
Confidence 87654
No 295
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.06 E-value=7.8e-10 Score=87.57 Aligned_cols=88 Identities=19% Similarity=0.296 Sum_probs=75.0
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC----------------------------CCchhHHhhC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC----------------------------DSEKSLMSKF 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~----------------------------~~~~~l~~~~ 228 (411)
.+++++|.||++||++|+...+.+.++++.+...+.+..+++ +.+..+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 467899999999999999999999999999877888888843 3345689999
Q ss_pred ccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
++..+|+++++..++.....+.|..+.+.+.+++.+
T Consensus 101 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 GVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp TCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred CcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 999999999997666656778898999999888765
No 296
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.06 E-value=7.4e-10 Score=90.51 Aligned_cols=91 Identities=16% Similarity=0.212 Sum_probs=77.5
Q ss_pred CCCeEEEEEeCCCChhhhh-hhHHHHHHHHHhcCC-eEEEEEeCC----------------------------Cchh---
Q 015217 177 SKDLWIVEFFAPWCGHCKK-LAPEWKKAANNLKGK-VKLGHVDCD----------------------------SEKS--- 223 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~-~~~~~~~~a~~~~~~-~~f~~v~~~----------------------------~~~~--- 223 (411)
.+++++|.||++||++|+. ..+.+.++++.+.++ +.+..|+++ ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4689999999999999999 599999999999875 899888852 2333
Q ss_pred ---HHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 224 ---LMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 224 ---l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+++.|++..+|+++++..++.....+.|..+.+.+.+.|.+.+.
T Consensus 109 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 109 IPSTMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp SCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred hhhHHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 88999999999999997666656777899999999999988764
No 297
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.05 E-value=1.2e-09 Score=89.56 Aligned_cols=108 Identities=13% Similarity=0.109 Sum_probs=79.0
Q ss_pred CCcEEeCccchhHHHhcCCCe-EEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecc-----------------
Q 015217 30 SPVVQLTPNNFKSKVLNANGV-VLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDAN----------------- 89 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~-~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~----------------- 89 (411)
..+..++++.+. ...-++++ ++|.|| ++||++|+...|.+.++.+.+++ .+.++.|+++
T Consensus 11 f~l~~~~G~~~~-l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~ 89 (161)
T 3drn_A 11 FEGIADNGEKIS-LSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFI 89 (161)
T ss_dssp CEEEETTSCEEE-GGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSE
T ss_pred eEeecCCCCEEE-HHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCce
Confidence 334455555554 22225665 999999 99999999999999999999986 4888888887
Q ss_pred ----ccHhHHHhcCCCc----ccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHHHH
Q 015217 90 ----EHQSLAQEYGIRG----FPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIKAL 138 (411)
Q Consensus 90 ----~~~~~~~~~~i~~----~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~~~ 138 (411)
...++++.|++.+ +|+++++. +|+....+.|........+-+.+.++..
T Consensus 90 ~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~il~~l~~l 147 (161)
T 3drn_A 90 LVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI 147 (161)
T ss_dssp EEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSSCTTHHHHHHHHHHHHH
T ss_pred EEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCCCCCcCHHHHHHHHHHh
Confidence 4567899999999 99998885 5665667778555554444444444444
No 298
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.05 E-value=1.6e-10 Score=92.64 Aligned_cols=94 Identities=11% Similarity=0.070 Sum_probs=66.2
Q ss_pred EeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccccH--------------------
Q 015217 34 QLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANEHQ-------------------- 92 (411)
Q Consensus 34 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~~-------------------- 92 (411)
..+++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ ++.++.|+++.+.
T Consensus 19 ~~~g~~~~-l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d 97 (143)
T 4fo5_A 19 LGNDAKAS-FHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHE 97 (143)
T ss_dssp -----CCC-SCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEEC
T ss_pred cCCCCEEE-HHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeec
Confidence 44444444 2223678999999999999999999999999999975 5888888887432
Q ss_pred ------hHHHhcCCCcccEEEEEe-CCCCCcccCCCCCcchhHHHH
Q 015217 93 ------SLAQEYGIRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFA 131 (411)
Q Consensus 93 ------~~~~~~~i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~ 131 (411)
.+++.|++.++|+.+++. +|+.+.+.. +.+.+.+.+
T Consensus 98 ~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l 140 (143)
T 4fo5_A 98 GLGKESELYKKYDLRKGFKNFLINDEGVIIAANV---TPEKLTEIL 140 (143)
T ss_dssp TTGGGSHHHHHTTGGGCCCEEEECTTSBEEEESC---CHHHHHHHH
T ss_pred ccccchHHHHHcCCCCCCcEEEECCCCEEEEccC---CHHHHHHHH
Confidence 577889999999988887 454433332 344444443
No 299
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.04 E-value=5.5e-10 Score=91.68 Aligned_cols=102 Identities=12% Similarity=0.074 Sum_probs=78.1
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChh-hhhhhHHHHHHHHHhCC-----CeEEEEEecccc---------------
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGH-CQALTPIWEKAATVLKG-----VATVAALDANEH--------------- 91 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~-----~i~~~~vd~~~~--------------- 91 (411)
...+++.+. ...-++++++|.||++||++ |+...|.+.++.+.+++ ++.++.|+++..
T Consensus 9 ~~~~G~~~~-l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~ 87 (164)
T 2ggt_A 9 TTHTGERKT-DKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFS 87 (164)
T ss_dssp EETTSCEEE-GGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTC
T ss_pred EeCCCCEEe-HHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcC
Confidence 344444443 22235899999999999998 99999999999998863 688888887642
Q ss_pred -------------HhHHHhcCCCccc---------------EEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 92 -------------QSLAQEYGIRGFP---------------TIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 92 -------------~~~~~~~~i~~~P---------------~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
..+++.||+...| +++++. +|+...++.|..+.+.+.+.+.+.+
T Consensus 88 ~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 88 PKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp SSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred CCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 1488899999999 666664 5666777888888888888887765
No 300
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.03 E-value=2.1e-10 Score=94.22 Aligned_cols=105 Identities=18% Similarity=0.265 Sum_probs=81.1
Q ss_pred CcEEeCccchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEe----------------------
Q 015217 161 ESIELNSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVD---------------------- 217 (411)
Q Consensus 161 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~---------------------- 217 (411)
.+..++.+.+... ...+++++|.||++||++|+...+.+.++++.+.. .+.+..|+
T Consensus 22 ~l~~~~g~~~~~~-~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~ 100 (164)
T 2h30_A 22 TMKTADNRPASVY-LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNY 100 (164)
T ss_dssp TCEETTSSBGGGG-CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCC
T ss_pred ccCCCCCCEeeHH-HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCC
Confidence 4666666655542 33467899999999999999999999999998743 34444443
Q ss_pred ------CCCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 218 ------CDSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 218 ------~~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++.+..++++|++..+|+++++..++.....+.|..+.+.+.+++.+.+
T Consensus 101 ~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 101 PKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp TTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred CcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 3445679999999999999999666655667789899999999988765
No 301
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=99.02 E-value=1.4e-09 Score=87.18 Aligned_cols=105 Identities=22% Similarity=0.260 Sum_probs=80.4
Q ss_pred CCCCceEeCChhHHHHhcCCcc---EEE----------eHHHHHHHHHHhhcCccEEEEecC--CCchhhHHHhCCCCCC
Q 015217 271 APPEVTELTSQDVMEEKCGSAA---ICF----------YLEMLLSVAEKFKRGHYSFVWAAA--GKQPDLENRVGVGGYG 335 (411)
Q Consensus 271 ~~~~v~~l~~~~~~~~~~~~~~---~~~----------~~~~~~~~a~~~~~~~~~f~~i~~--~~~~~~~~~f~~~~~~ 335 (411)
..|.|.+++..+....+.++.+ ++| +.+.++.+|++|+++ +.|+++|. .++...+..||++..+
T Consensus 12 ~~PLV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 12 QLPLVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp ---CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred cCCeeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEecchHhHHHHHHHcCCCccc
Confidence 4588888888776555554443 223 458899999999998 99999998 5566789999999878
Q ss_pred CCeEEEeec--CCCccccCCCCCChhHHHHHHHHHccCCCCCC
Q 015217 336 YPALVALNV--KKGVYTPLKSAFELEHIVEFVKEAGRGGKGNL 376 (411)
Q Consensus 336 ~P~l~v~~~--~~~~~~~~~~~~~~~~i~~fi~~~~~g~~~~~ 376 (411)
.|+++|++. ...+|....++++.+.|++|+.++++|++++.
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~ 133 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPH 133 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEE
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCcccc
Confidence 999999985 34566433488999999999999999987544
No 302
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.01 E-value=2.3e-09 Score=86.85 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=72.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC-------------------------chhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------------------------EKSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------------------------~~~l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++++.+.++ +.+..|+++. ...+++.|++
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 107 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCI 107 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCC
Confidence 4579999999999999999999999999999875 9999999886 5678999999
Q ss_pred ccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 231 QGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 231 ~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
..+|+++++..++.....+ .+.+++.+++.+.+.
T Consensus 108 ~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~l~~ 141 (152)
T 2lrn_A 108 VGFPHIILVDPEGKIVAKE---LRGDDLYNTVEKFVN 141 (152)
T ss_dssp CSSCEEEEECTTSEEEEEC---CCTTHHHHHHHHHHT
T ss_pred CcCCeEEEECCCCeEEEee---CCHHHHHHHHHHHHh
Confidence 9999999996555333333 345678888877654
No 303
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.01 E-value=1.5e-09 Score=88.45 Aligned_cols=91 Identities=16% Similarity=0.207 Sum_probs=76.9
Q ss_pred CCCeEEEEEeCCCChhhhhh-hHHHHHHHHHhcC-CeEEEEEeCC----------------------------Cch----
Q 015217 177 SKDLWIVEFFAPWCGHCKKL-APEWKKAANNLKG-KVKLGHVDCD----------------------------SEK---- 222 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~-~~~~~~~a~~~~~-~~~f~~v~~~----------------------------~~~---- 222 (411)
..++++|.||++||++|+.. .+.+.++++.+.+ .+.|..|+++ ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 46799999999999999996 9999999999985 5888888853 112
Q ss_pred -hHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 223 -SLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 223 -~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+++.|++..+|+++++..++.....+.|..+.+.+.+.|.+.+.
T Consensus 107 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 107 PRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 488999999999999997666556677899999999999988764
No 304
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.56 E-value=3.6e-11 Score=96.40 Aligned_cols=68 Identities=22% Similarity=0.514 Sum_probs=57.9
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhC---CCeEEEEEecccc-------------------------HhHHHh
Q 015217 47 ANG-VVLVEFYAPWCGHCQALTPIWEKAATVLK---GVATVAALDANEH-------------------------QSLAQE 97 (411)
Q Consensus 47 ~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~---~~i~~~~vd~~~~-------------------------~~~~~~ 97 (411)
+++ +++|.||++||++|+.+.|.+.++++.++ .++.++.|+++.. ..++++
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAK 103 (143)
Confidence 466 99999999999999999999999999883 3677888887754 368999
Q ss_pred cCCCcccEEEEEe-CCCC
Q 015217 98 YGIRGFPTIKVFV-PGKP 114 (411)
Q Consensus 98 ~~i~~~P~~~~~~-~g~~ 114 (411)
|++.++|+++++. +|+.
T Consensus 104 ~~v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 104 YGITGIPALVIVKKDGTL 121 (143)
Confidence 9999999999997 5654
No 305
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.56 E-value=3.8e-11 Score=98.26 Aligned_cols=101 Identities=19% Similarity=0.221 Sum_probs=71.9
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHH-HHHHhC--CCeEEEEEeccccHhHHHhcC---------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEK-AATVLK--GVATVAALDANEHQSLAQEYG--------- 99 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~-~~~~~~--~~i~~~~vd~~~~~~~~~~~~--------- 99 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.+ +...+. .++.++.|+++..++.+++|.
T Consensus 18 l~~~~g~~~~-l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~ 96 (159)
T 2ls5_A 18 ITLTDGKQVT-LSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPL 96 (159)
Confidence 3444555444 222367899999999999999999999998 888776 368888898886654444333
Q ss_pred ---------------CCcccEEEEE-eCCCCCcccCCCCCcchhHHHHHHH
Q 015217 100 ---------------IRGFPTIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 100 ---------------i~~~P~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+.++|+++++ ++|+.+.++.| .+.+.+.+++.+.
T Consensus 97 ~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l 146 (159)
T 2ls5_A 97 GLDPGADIFAKYALRDAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQI 146 (159)
Confidence 5679999988 56766666666 4556666666543
No 306
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.99 E-value=1.6e-10 Score=89.08 Aligned_cols=83 Identities=19% Similarity=0.349 Sum_probs=60.8
Q ss_pred HHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc-----HhHHHhcCCCcccEEEEEeCCCCCcc
Q 015217 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH-----QSLAQEYGIRGFPTIKVFVPGKPPVD 117 (411)
Q Consensus 43 ~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~-----~~~~~~~~i~~~P~~~~~~~g~~~~~ 117 (411)
.+.. ++++++ ||++||++|+.+.|.+.++.. .+.++.+|.+.+ ..++++||+.++|++ |.+|+.+..
T Consensus 15 ~~~~-~~~vv~-f~a~~C~~C~~~~~~l~~~~~----~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~~ 86 (116)
T 2e7p_A 15 ELAS-SAPVVV-FSKTYCGYCNRVKQLLTQVGA----SYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIGG 86 (116)
T ss_dssp HHHT-SSSEEE-EECTTCHHHHHHHHHHHHHTC----CCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEEC
T ss_pred HHHc-CCCEEE-EECCCChhHHHHHHHHHHcCC----CeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEECC
Confidence 3433 455555 999999999999999988753 356666666655 569999999999998 457766666
Q ss_pred cCCCC---CcchhHHHHHH
Q 015217 118 YQGAR---DVKPIAEFALQ 133 (411)
Q Consensus 118 ~~g~~---~~~~l~~~~~~ 133 (411)
+.|.. +.+.+.+++.+
T Consensus 87 ~~~~~~~~~~~~l~~~l~~ 105 (116)
T 2e7p_A 87 CDTVVEKHQRNELLPLLQD 105 (116)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHhCChHHHHHHH
Confidence 65554 66677777764
No 307
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=98.99 E-value=1.6e-09 Score=87.11 Aligned_cols=87 Identities=17% Similarity=0.319 Sum_probs=71.8
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHh-cCC-eEEEEEeCCC-------------------------chhHHhhCc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNL-KGK-VKLGHVDCDS-------------------------EKSLMSKFN 229 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~-~~~-~~f~~v~~~~-------------------------~~~l~~~~~ 229 (411)
.+++++|.||++||++|+...+.+.++++.+ .++ +.+..|+++. +..+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 4579999999999999999999999999999 665 9999998876 347899999
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+..+|+++++..++. +.+... +.+.+.+++.+.+
T Consensus 112 v~~~P~~~lid~~G~--i~~~~~-~~~~l~~~l~~ll 145 (148)
T 3fkf_A 112 ILTLPTNILLSPTGK--ILARDI-QGEALTGKLKELL 145 (148)
T ss_dssp CCSSSEEEEECTTSB--EEEESC-CHHHHHHHHHHHC
T ss_pred CCCcCEEEEECCCCe--EEEecC-CHHHHHHHHHHHH
Confidence 999999999966553 333222 7888888887764
No 308
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.98 E-value=1.2e-09 Score=89.59 Aligned_cols=78 Identities=14% Similarity=0.267 Sum_probs=65.1
Q ss_pred CccchHHHHhcCCCeEEEEEeCCCChhhhhhhH-HH--HHHHHHhcCCeEEEEEeCCCchhHHhhC--------cccccc
Q 015217 166 NSSNFDELVLKSKDLWIVEFFAPWCGHCKKLAP-EW--KKAANNLKGKVKLGHVDCDSEKSLMSKF--------NVQGFP 234 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~-~~--~~~a~~~~~~~~f~~v~~~~~~~l~~~~--------~v~~~P 234 (411)
.++.+.. ....+++++|.||++||++|+.+.+ .| .++++.+.+++.++.||.+..+++.+.| |+.++|
T Consensus 28 ~~ea~~~-A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~P 106 (173)
T 3ira_A 28 GEEAFEK-ARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWP 106 (173)
T ss_dssp SHHHHHH-HHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSS
T ss_pred CHHHHHH-HHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCc
Confidence 3455555 4567889999999999999999988 44 5778888778999999999999999888 999999
Q ss_pred EEEEEcCCCC
Q 015217 235 TILVFGADKD 244 (411)
Q Consensus 235 ~i~~~~~~~~ 244 (411)
++++++.+++
T Consensus 107 t~v~l~~dG~ 116 (173)
T 3ira_A 107 LNIIMTPGKK 116 (173)
T ss_dssp EEEEECTTSC
T ss_pred ceeeECCCCC
Confidence 9999975553
No 309
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.98 E-value=2.1e-09 Score=89.99 Aligned_cols=90 Identities=13% Similarity=0.329 Sum_probs=75.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-e------EEEEEeCCC-chhHHhhC--------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-V------KLGHVDCDS-EKSLMSKF-------------------- 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~------~f~~v~~~~-~~~l~~~~-------------------- 228 (411)
..++++|.||++||++|+...+.+.++++.+.++ + .|..|+++. +...+++|
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4579999999999999999999999999999875 7 999999987 56555554
Q ss_pred -----ccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 229 -----NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 229 -----~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++..+|+++++..++.....+.|..+.+.|.+++.+.+
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 67889998888766665667889899999999998765
No 310
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.98 E-value=1.3e-09 Score=90.23 Aligned_cols=101 Identities=20% Similarity=0.155 Sum_probs=74.7
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecc-----------ccHhHH-----
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDAN-----------EHQSLA----- 95 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~-----------~~~~~~----- 95 (411)
..++++.+. ...-++++++|.||++||++|+ ..|.+.++.+.+++ .+.++.|+++ ...+++
T Consensus 18 ~d~~G~~~~-l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~ 95 (171)
T 3cmi_A 18 VDKKGQPFP-FDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYG 95 (171)
T ss_dssp BBTTSCBCC-GGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------C
T ss_pred EcCCCCEec-HHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccC
Confidence 344444444 2223689999999999999999 99999999999986 4888888773 111222
Q ss_pred -------------------------HhcCCCccc------EEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 96 -------------------------QEYGIRGFP------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 96 -------------------------~~~~i~~~P------~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+.|++.++| +++++ ++|+...++.|..+.+.+.+.+.+.+
T Consensus 96 ~~~p~~~d~d~~~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 96 VTFPIMKKIDVNGGNEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp CCSCBBCCCBSSSTTBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CCceEEeeccCCCccchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 246888999 76677 55766778889899999999988775
No 311
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.96 E-value=2.8e-09 Score=87.89 Aligned_cols=102 Identities=17% Similarity=0.156 Sum_probs=74.6
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------c----HhHH-Hhc-
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------H----QSLA-QEY- 98 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------~----~~~~-~~~- 98 (411)
..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .+++ +++
T Consensus 17 ~~~~G~~~~-l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~ 95 (169)
T 2v1m_A 17 KDINGVDVS-LEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYG 95 (169)
T ss_dssp EBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHC
T ss_pred ecCCCCCcc-HHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcC
Confidence 344444444 2223689999999999999999999999999999986 48999998852 1 2231 332
Q ss_pred ----------------------------C-----CCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHH
Q 015217 99 ----------------------------G-----IRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 99 ----------------------------~-----i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
| +.++|+++++. +|+.+.++.|..+.+.+.+.+.+.+
T Consensus 96 ~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 96 VQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp CCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3 33457777774 5666778889889999999888775
No 312
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.95 E-value=1e-09 Score=90.48 Aligned_cols=88 Identities=13% Similarity=0.217 Sum_probs=71.4
Q ss_pred cCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC-----------------------CCchhHHhhCcccc
Q 015217 176 KSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-----------------------DSEKSLMSKFNVQG 232 (411)
Q Consensus 176 ~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-----------------------~~~~~l~~~~~v~~ 232 (411)
..+++++|.||++||++|+...+.+.++++. .+.+..|++ +.+..+++.|++..
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 125 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYG 125 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCS
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccc
Confidence 3567899999999999999999999999886 466766663 44557889999999
Q ss_pred ccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 233 FPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+|+.+++..++.....+.|..+.+.+.+++.+.+
T Consensus 126 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 126 APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp SSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred cCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 9988888666655567789889999988887765
No 313
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.94 E-value=4.3e-09 Score=86.42 Aligned_cols=87 Identities=24% Similarity=0.467 Sum_probs=73.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC------------------Cc-----------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------SE----------------- 221 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------~~----------------- 221 (411)
..++++|.||++||++|+...+.+.++.+.+. .+.|..|+++ ..
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 45799999999999999999999999999998 8999999987 33
Q ss_pred -----hhHHhhCccccccEEEEEcCCCCCcccccCCC-CHHHHHHHHHHHh
Q 015217 222 -----KSLMSKFNVQGFPTILVFGADKDSPIPYEGAR-TAGAIESFALEQL 266 (411)
Q Consensus 222 -----~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~-~~~~i~~fi~~~~ 266 (411)
..+++.|++..+|+++++..++. +.+.|.. +.+.+.+.+.+.+
T Consensus 115 ~~~d~~~~~~~~~v~~~P~~~lid~~G~--i~~~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 115 MVMDDGSLVEKFNVRSIDYIVIMDKSSN--VLYAGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEECCSHHHHHTTCCSSSEEEEEETTCC--EEEEEESCCHHHHHHHHHHC-
T ss_pred EEeChHHHHHHhCCCCceEEEEEcCCCc--EEEeCCCCCHHHHHHHHHHHh
Confidence 27889999999999999976653 3337888 8899998887653
No 314
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.94 E-value=2.5e-09 Score=90.20 Aligned_cols=103 Identities=18% Similarity=0.173 Sum_probs=77.0
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------c----HhHH-Hh-
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------H----QSLA-QE- 97 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------~----~~~~-~~- 97 (411)
+..++.+.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .+++ ++
T Consensus 33 l~~~~G~~~~-l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 111 (190)
T 2vup_A 33 VLDADHKPYN-LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKF 111 (190)
T ss_dssp CBBTTSSBCC-GGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred EEcCCCCEEE-HHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhc
Confidence 4445555554 2223688999999999999999999999999999986 48999998862 1 1233 22
Q ss_pred ----------------------------cCCCccc------EEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 98 ----------------------------YGIRGFP------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 98 ----------------------------~~i~~~P------~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++.++| +.+++ ++|+.+.++.|..+.+.+.+.+.+.+
T Consensus 112 ~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 112 KAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp CCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred CCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 3777888 66666 55766778889888888888887766
No 315
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.94 E-value=5.8e-10 Score=92.33 Aligned_cols=87 Identities=18% Similarity=0.213 Sum_probs=69.9
Q ss_pred CCCeEEEEEECCCChh-hhhhhHHHHHHHHHhCC----CeEEEEEecccc----------------------------Hh
Q 015217 47 ANGVVLVEFYAPWCGH-CQALTPIWEKAATVLKG----VATVAALDANEH----------------------------QS 93 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~~----~i~~~~vd~~~~----------------------------~~ 93 (411)
++++++|.||++||++ |+...|.+.++.+.+++ ++.++.|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 6889999999999997 99999999999998873 689999998742 35
Q ss_pred HHHhcCC---------------CcccEEEEEeCCCCCcccCCCC--CcchhHHHHHH
Q 015217 94 LAQEYGI---------------RGFPTIKVFVPGKPPVDYQGAR--DVKPIAEFALQ 133 (411)
Q Consensus 94 ~~~~~~i---------------~~~P~~~~~~~g~~~~~~~g~~--~~~~l~~~~~~ 133 (411)
+++.|++ .++|+++++++|+...++.|.. +.+.+.+.+.+
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHH
Confidence 6666664 5789999999665566777777 77777777654
No 316
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.94 E-value=5.8e-10 Score=79.64 Aligned_cols=61 Identities=18% Similarity=0.311 Sum_probs=49.9
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-ccHhHHHhcCCCcccEEEEEeCCC
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-EHQSLAQEYGIRGFPTIKVFVPGK 113 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~P~~~~~~~g~ 113 (411)
-++.||++||++|+.+.+.++++.+.+...+.++.+|.+ +..+++++||+.++|++++ +|+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 378899999999999999999988765445666666665 5778999999999999876 665
No 317
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.93 E-value=4.1e-09 Score=85.91 Aligned_cols=89 Identities=13% Similarity=0.335 Sum_probs=74.1
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC-------------------chhHHhhCccccccEE
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-------------------EKSLMSKFNVQGFPTI 236 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-------------------~~~l~~~~~v~~~P~i 236 (411)
.+++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++. +..+++.|++..+|++
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~ 119 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDT 119 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEE
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceE
Confidence 457999999999999999999999999999984 69999999876 5789999999999999
Q ss_pred EEEcCCCCCcccccCCC--CHHHHHHHHHHH
Q 015217 237 LVFGADKDSPIPYEGAR--TAGAIESFALEQ 265 (411)
Q Consensus 237 ~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~ 265 (411)
+++..++.....+.|.. +..++.+.+.+.
T Consensus 120 ~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 120 FIVDRKGIIRQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp EEECTTSBEEEEEESCCCTTSHHHHHHHHTT
T ss_pred EEEcCCCCEEEEEeCCCccchHHHHHHHHhh
Confidence 99977776567777764 456666666554
No 318
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.93 E-value=2.1e-09 Score=88.74 Aligned_cols=102 Identities=14% Similarity=0.128 Sum_probs=75.8
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccc-------c----HhHHH-hc-
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLAQ-EY- 98 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~-------~----~~~~~-~~- 98 (411)
..++.+.+. ...-++++++|.||++||++|+...|.+.++.+.++++ +.++.|+++. . .++++ ++
T Consensus 18 ~~~~g~~~~-l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 96 (170)
T 2p5q_A 18 KDAKENDVD-LSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFK 96 (170)
T ss_dssp EBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTC
T ss_pred EcCCCCEec-HHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcC
Confidence 344444444 22236899999999999999999999999999999874 9999998852 1 23344 33
Q ss_pred ----------------------------CC--Cccc---EEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 99 ----------------------------GI--RGFP---TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 99 ----------------------------~i--~~~P---~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
++ .++| +.+++ ++|+...++.|..+.+.+.+.+.+.+
T Consensus 97 ~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 97 SEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp CCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred CCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 34 5678 77777 45766778889989999999888764
No 319
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.92 E-value=3.5e-09 Score=85.80 Aligned_cols=91 Identities=21% Similarity=0.380 Sum_probs=74.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc-----------------------hhHHhhCcccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE-----------------------KSLMSKFNVQG 232 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~-----------------------~~l~~~~~v~~ 232 (411)
.+++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++.+ ..+++.|++..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 106 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTG 106 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCS
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCC
Confidence 467999999999999999999999999999987 689999988765 34888999999
Q ss_pred ccEEEEEcCCCCCcccccCCC--CHHHHHHHHHHHhh
Q 015217 233 FPTILVFGADKDSPIPYEGAR--TAGAIESFALEQLE 267 (411)
Q Consensus 233 ~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~~~ 267 (411)
+|+++++..++.....+.|.. +.+++.++|.+...
T Consensus 107 ~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~ 143 (154)
T 3kcm_A 107 VPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELS 143 (154)
T ss_dssp BCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC--
T ss_pred CCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHH
Confidence 999988876665556677764 66788888876543
No 320
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.91 E-value=2.2e-09 Score=87.19 Aligned_cols=89 Identities=21% Similarity=0.405 Sum_probs=72.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-----------------------CchhHHhhCccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----------------------SEKSLMSKFNVQGF 233 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----------------------~~~~l~~~~~v~~~ 233 (411)
.+++++|.||++||++|+...+.+.++++. +++.|..|+++ ....+++.|++..+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 118 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGV 118 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSS
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCcc
Confidence 367899999999999999999999998876 55888877753 34468889999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
|+++++..++.....+.|..+.+.+.+++.+.+.
T Consensus 119 P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~l~ 152 (156)
T 1kng_A 119 PETFVVGREGTIVYKLVGPITPDNLRSVLLPQME 152 (156)
T ss_dssp CEEEEECTTSBEEEEEESCCCHHHHHHTHHHHHH
T ss_pred CeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHHHH
Confidence 9888886666555667898899999988877653
No 321
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.91 E-value=3.8e-09 Score=84.34 Aligned_cols=86 Identities=13% Similarity=0.316 Sum_probs=69.1
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHH---HHHHhcC-CeEEEEEeCCCchhH------------------------HhhC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKK---AANNLKG-KVKLGHVDCDSEKSL------------------------MSKF 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~---~a~~~~~-~~~f~~v~~~~~~~l------------------------~~~~ 228 (411)
..++++|.||++||++|+...+.+.+ +.+.+.+ .+.+..|+.+.+... ++.|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46799999999999999999999888 8888866 499999988765543 3489
Q ss_pred ccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
++..+|+++++..++ .+.+ +..+.+++.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G--~i~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRK--RVIL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTC--BEEE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCC--CEEe-cCCCHHHHHHHHHHH
Confidence 999999999997655 3344 567889999988764
No 322
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.91 E-value=4.5e-09 Score=87.72 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=79.6
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------c----HhHHHh-c
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------H----QSLAQE-Y 98 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------~----~~~~~~-~ 98 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .+++++ +
T Consensus 23 l~d~~G~~v~-l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~ 101 (180)
T 3kij_A 23 VKDAKGRTVS-LEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNY 101 (180)
T ss_dssp EEBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred EecCCCCEec-HHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhc
Confidence 3444555554 2233688999999999999999999999999999987 48888887653 2 345666 5
Q ss_pred CCC--------------------------cccE----EEEE-eCCCCCcccCCCCCcchhHHHHHHHHHHHHH
Q 015217 99 GIR--------------------------GFPT----IKVF-VPGKPPVDYQGARDVKPIAEFALQQIKALLK 140 (411)
Q Consensus 99 ~i~--------------------------~~P~----~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~ 140 (411)
++. +.|+ .+++ ++|+.+.+|.|..+.+.+.+.+.+.++....
T Consensus 102 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL~~~~~ 174 (180)
T 3kij_A 102 GVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVII 174 (180)
T ss_dssp CCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHHHHHHH
T ss_pred CCCCceeeeeeccCccccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 532 1465 4555 5676677889999999999999888766553
No 323
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.91 E-value=4.5e-09 Score=85.12 Aligned_cols=84 Identities=10% Similarity=0.182 Sum_probs=70.4
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCCchh-----------------------HHhhCccccc
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDSEKS-----------------------LMSKFNVQGF 233 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~~~~-----------------------l~~~~~v~~~ 233 (411)
.++++|.||++||++|+...+.+.++++.+.++ +.+..|+++.... +++.|++..+
T Consensus 35 gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~ 114 (152)
T 2lrt_A 35 GKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNL 114 (152)
T ss_dssp GSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSC
T ss_pred CCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccC
Confidence 578999999999999999999999999999875 9999999887654 8889999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHH
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESF 261 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~f 261 (411)
|+++++..++.....+.|..+.++...-
T Consensus 115 P~~~lid~~G~i~~~~~g~~~~e~~~~~ 142 (152)
T 2lrt_A 115 PSVFLVNRNNELSARGENIKDLDEAIKK 142 (152)
T ss_dssp SEEEEEETTTEEEEETTTCSCHHHHHHH
T ss_pred ceEEEECCCCeEEEecCCHHHHHHHHHH
Confidence 9999997666556677787666554443
No 324
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.91 E-value=1.1e-08 Score=79.18 Aligned_cols=97 Identities=15% Similarity=0.242 Sum_probs=79.9
Q ss_pred CCcEEeCc-cchHHHHhcCCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhCccccccEEEE
Q 015217 160 NESIELNS-SNFDELVLKSKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 160 ~~v~~l~~-~~~~~~~~~~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~~v~~~P~i~~ 238 (411)
..+..|++ .++.++ ...+.+++|.|+++||++| .+.|.++|+.+ ..+.|+.++ ++++++++++. .|++++
T Consensus 21 ~~~~~i~s~~e~e~f-i~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vvl 91 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEF-IAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTICL 91 (124)
T ss_dssp CCCEECCSHHHHHHH-HHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEEE
T ss_pred CcceEcCCHHHHHHH-HhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEEE
Confidence 33455754 556664 5678899999999999876 78999999999 789999865 68899999999 699999
Q ss_pred EcCCCCCcccccC----CCCHHHHHHHHHHH
Q 015217 239 FGADKDSPIPYEG----ARTAGAIESFALEQ 265 (411)
Q Consensus 239 ~~~~~~~~~~y~g----~~~~~~i~~fi~~~ 265 (411)
|+...+....|.| ..+.+.|.+||..+
T Consensus 92 fkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 92 FRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9987666778886 78999999999876
No 325
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.89 E-value=3e-09 Score=89.42 Aligned_cols=89 Identities=15% Similarity=0.112 Sum_probs=72.3
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------------------------cHhHHHhcC
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------HQSLAQEYG 99 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------------------------~~~~~~~~~ 99 (411)
++++++|.|| ++||++|+...|.+.++.+.+++ ++.++.|+++. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 5789999999 99999999999999999999875 58888888764 346888999
Q ss_pred CC------cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHHH
Q 015217 100 IR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQI 135 (411)
Q Consensus 100 i~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~~ 135 (411)
+. ++|++++++ +|+...++.|.. +.+.+.+.+.+..
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 156 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQ 156 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999995 566566666654 5677777776654
No 326
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.88 E-value=1.2e-08 Score=81.95 Aligned_cols=102 Identities=11% Similarity=0.149 Sum_probs=78.6
Q ss_pred cchHHHH---hcCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCCCc--hhHHhhCccccccEEEEE
Q 015217 168 SNFDELV---LKSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSE--KSLMSKFNVQGFPTILVF 239 (411)
Q Consensus 168 ~~~~~~~---~~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~--~~l~~~~~v~~~P~i~~~ 239 (411)
.++.+.+ .+.+++++|.|+++||..|+.+.... .++++.++.++.+..+|.++. ..+.++|++.++|+++++
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fl 108 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSIL 108 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEE
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEE
Confidence 3444443 34578999999999999999997755 667777766889999998653 358899999999999999
Q ss_pred cCC-CCCcccccCCCCHHHHHHHHHHHhhhcC
Q 015217 240 GAD-KDSPIPYEGARTAGAIESFALEQLETNV 270 (411)
Q Consensus 240 ~~~-~~~~~~y~g~~~~~~i~~fi~~~~~~~~ 270 (411)
... ++....+.| .+.+++..++.+.+..+.
T Consensus 109 d~~~G~~l~~~~g-~~~~~fl~~L~~~l~~~~ 139 (153)
T 2dlx_A 109 DPRTGQKLVEWHQ-LDVSSFLDQVTGFLGEHG 139 (153)
T ss_dssp CTTTCCCCEEESS-CCHHHHHHHHHHHHHHTC
T ss_pred eCCCCcEeeecCC-CCHHHHHHHHHHHHHhcC
Confidence 765 444444555 899999998888776543
No 327
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.88 E-value=1.4e-09 Score=81.14 Aligned_cols=78 Identities=13% Similarity=0.164 Sum_probs=61.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc--ccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCc
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDV 124 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~--~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~ 124 (411)
...+.++.|+++||++|+.+.+.+++++ ..+.+..+|++ ++++++++|| .++|++ +.+|+.. ..+..+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~----~~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~ 84 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYK----DRFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNT 84 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTS----SSSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCH
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhh----hCCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCH
Confidence 4567899999999999999999988754 23899999998 7889999999 999986 3466542 3455777
Q ss_pred chhHHHHHH
Q 015217 125 KPIAEFALQ 133 (411)
Q Consensus 125 ~~l~~~~~~ 133 (411)
+.|.+++.+
T Consensus 85 ~~l~~~l~~ 93 (100)
T 1wjk_A 85 SKLEKQLRK 93 (100)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHH
Confidence 777777754
No 328
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.88 E-value=3.3e-09 Score=89.20 Aligned_cols=105 Identities=17% Similarity=0.158 Sum_probs=76.0
Q ss_pred CCcEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------c-HhH---HH-
Q 015217 30 SPVVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------H-QSL---AQ- 96 (411)
Q Consensus 30 ~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------~-~~~---~~- 96 (411)
..+..++++.+. ...-+++++||.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .++ ++
T Consensus 29 f~l~d~~G~~~~-l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~ 107 (187)
T 3dwv_A 29 FEVLDADHKPYN-LVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCT 107 (187)
T ss_dssp SCCBBTTSCBCC-GGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCB
T ss_pred eEEEcCCCCEee-HHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHh
Confidence 334455555555 3334689999999999999999999999999999987 48888887752 1 111 11
Q ss_pred --------------------------------hcCCCccc---EEEEE-eCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 97 --------------------------------EYGIRGFP---TIKVF-VPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 97 --------------------------------~~~i~~~P---~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
.+++..+| +++++ ++|+...++.|..+.+.+.+.+.+.+
T Consensus 108 ~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 108 KFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp CCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred ccCCCCceeeccccCCcchhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 12344566 77777 45666778889989998888887765
No 329
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.87 E-value=4.3e-09 Score=103.02 Aligned_cols=94 Identities=17% Similarity=0.221 Sum_probs=78.6
Q ss_pred EeCccchhHHHh-cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEEEEeCC
Q 015217 34 QLTPNNFKSKVL-NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIKVFVPG 112 (411)
Q Consensus 34 ~l~~~~f~~~~~-~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~~~~~g 112 (411)
.++++.++ .+. ..++..++.||++||++|+.+.|.+++++..++ ++.+.++|.+..++++++|+|.++|++++ +|
T Consensus 103 ~~~~~~~~-~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g 178 (521)
T 1hyu_A 103 KEAQSLLE-QIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGGTFQNEITERNVMGVPAVFV--NG 178 (521)
T ss_dssp CSCHHHHH-HHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETTTCHHHHHHTTCCSSSEEEE--TT
T ss_pred CCCHHHHH-HHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEechhhHHHHHHhCCCccCEEEE--CC
Confidence 56766666 443 346678999999999999999999999998876 79999999999999999999999999866 66
Q ss_pred CCCcccCCCCCcchhHHHHHH
Q 015217 113 KPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 113 ~~~~~~~g~~~~~~l~~~~~~ 133 (411)
+.+ ..|..+.+.+.+++.+
T Consensus 179 ~~~--~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 179 KEF--GQGRMTLTEIVAKVDT 197 (521)
T ss_dssp EEE--EESCCCHHHHHHHHCC
T ss_pred EEE--ecCCCCHHHHHHHHhh
Confidence 543 3488888888888754
No 330
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.87 E-value=4.2e-09 Score=86.02 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=72.3
Q ss_pred cEEeCccchhHHHhcCCC-eEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc------------------
Q 015217 32 VVQLTPNNFKSKVLNANG-VVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE------------------ 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~-~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~------------------ 90 (411)
+...+++.+. ...-.++ +++|.|| ++||++|+...+.+.++.+.+++ ++.++.|+++.
T Consensus 20 l~~~~G~~~~-l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~ 98 (160)
T 1xvw_A 20 LRDQNQQLVT-LRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLL 98 (160)
T ss_dssp EECTTSCEEE-GGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEE
T ss_pred eEcCCCCEEe-HHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEE
Confidence 3344444444 2222455 9999998 99999999999999999999875 58888888763
Q ss_pred -----cHhHHHhcCCC----ccc--EEEEEe-CCCCCcccCCCCCcchhHHHHH
Q 015217 91 -----HQSLAQEYGIR----GFP--TIKVFV-PGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 91 -----~~~~~~~~~i~----~~P--~~~~~~-~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
+..+++.|++. ++| +++++. +|+...++.|..+.....+.+.
T Consensus 99 ~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~ 152 (160)
T 1xvw_A 99 SDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWT 152 (160)
T ss_dssp ECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHH
T ss_pred ecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHH
Confidence 56789999999 999 666764 5666667777765543333333
No 331
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.87 E-value=6.6e-09 Score=83.02 Aligned_cols=83 Identities=16% Similarity=0.278 Sum_probs=67.1
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHH---HHHHhcC-CeEEEEEeCCCchh------------------------HHhhCc
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKK---AANNLKG-KVKLGHVDCDSEKS------------------------LMSKFN 229 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~---~a~~~~~-~~~f~~v~~~~~~~------------------------l~~~~~ 229 (411)
.++++|.||++||++|+...+.+.+ +.+.+.+ .+.+..|+.+.... +++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5799999999999999999999999 9999965 58898898876533 477899
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
+..+|+++++..++. +.+.+ .+.+++.+|+.
T Consensus 111 v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 111 LRAIPTLYLLDKNKT--VLLKD-ATLQKVEQYLA 141 (142)
T ss_dssp CTTCSEEEEECTTCB--EEEEE-ECHHHHHHHHH
T ss_pred CCcCCeEEEECCCCc--EEecC-CCHHHHHHHHh
Confidence 999999999976663 34433 35788888764
No 332
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.87 E-value=4.4e-09 Score=75.94 Aligned_cols=75 Identities=20% Similarity=0.208 Sum_probs=59.1
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH----hHHHhcC--CCcccEEEEEeCCCCCcccCCCCCc
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYG--IRGFPTIKVFVPGKPPVDYQGARDV 124 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~----~~~~~~~--i~~~P~~~~~~~g~~~~~~~g~~~~ 124 (411)
-++.|+++||++|+.+.+.+++++..+++ +.+..+|++.++ ++.+++| +.++|+++ .+|+.+. | .
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~--~~g~~i~---~---~ 72 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIF--VDQQHIG---G---Y 72 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEE--ETTEEEE---S---S
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeEE--ECCEEEE---C---H
Confidence 37889999999999999999999987664 899999998654 7999999 99999973 3665432 2 3
Q ss_pred chhHHHHHHH
Q 015217 125 KPIAEFALQQ 134 (411)
Q Consensus 125 ~~l~~~~~~~ 134 (411)
+.+.+++.+.
T Consensus 73 ~~l~~~~~~~ 82 (85)
T 1ego_A 73 TDFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 5677776654
No 333
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.86 E-value=1.2e-08 Score=83.82 Aligned_cols=66 Identities=24% Similarity=0.485 Sum_probs=59.4
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEeCCCc------------------------hhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSE------------------------KSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~------------------------~~l~~~~~v 230 (411)
..++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++.. ..+++.|++
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v 126 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSV 126 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCC
Confidence 467999999999999999999999999999986 688888888766 678999999
Q ss_pred ccccEEEEEcCC
Q 015217 231 QGFPTILVFGAD 242 (411)
Q Consensus 231 ~~~P~i~~~~~~ 242 (411)
..+|+++++..+
T Consensus 127 ~~~Pt~~lid~~ 138 (165)
T 3s9f_A 127 ESIPTLIGLNAD 138 (165)
T ss_dssp CSSSEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 999999999865
No 334
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.86 E-value=1.1e-08 Score=86.56 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=74.4
Q ss_pred CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC-----------------------------CchhHHhhC
Q 015217 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-----------------------------SEKSLMSKF 228 (411)
Q Consensus 179 ~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-----------------------------~~~~l~~~~ 228 (411)
.+++|.||++||++|+...+.+.++.+.+.++ +.+..|+++ .+..+++.|
T Consensus 47 ~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (196)
T 2ywi_A 47 AATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAY 126 (196)
T ss_dssp SEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHH
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHh
Confidence 36999999999999999999999999999874 899999873 345789999
Q ss_pred ccccccEEEEEcCCCCCccc---------ccCCCCHHHHHHHHHHHhhh
Q 015217 229 NVQGFPTILVFGADKDSPIP---------YEGARTAGAIESFALEQLET 268 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~---------y~g~~~~~~i~~fi~~~~~~ 268 (411)
++..+|+++++..++..... +.|..+.++|.+.|.+.+..
T Consensus 127 ~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~~ 175 (196)
T 2ywi_A 127 DAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLEG 175 (196)
T ss_dssp TCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHHT
T ss_pred CCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHcC
Confidence 99999999999765543333 45777889999999887754
No 335
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.85 E-value=2e-09 Score=89.97 Aligned_cols=102 Identities=17% Similarity=0.078 Sum_probs=72.5
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCC-eEEEEEeccc-------c----HhHHHh-c
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGV-ATVAALDANE-------H----QSLAQE-Y 98 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-i~~~~vd~~~-------~----~~~~~~-~ 98 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.++++ +.++.|+++. . .+++++ +
T Consensus 34 l~~~~G~~~~-l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~ 112 (181)
T 2p31_A 34 AVNIRGKLVS-LEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTY 112 (181)
T ss_dssp EEBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHH
T ss_pred eecCCCCEec-HHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhc
Confidence 3344444444 22236889999999999999999999999999999864 8999998763 1 233443 2
Q ss_pred -----------------------CCCccc-------EEEEE-eCCCCCcccCCCCCcchhHHHHHHH
Q 015217 99 -----------------------GIRGFP-------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 99 -----------------------~i~~~P-------~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
++.++| +.+++ ++|+.+.++.|..+.+.+.+.+.+.
T Consensus 113 ~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 113 SVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp CCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTT
T ss_pred CCCceeEeecccCCccchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 245678 66666 5576677888888888777776543
No 336
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.84 E-value=1.3e-08 Score=81.43 Aligned_cols=67 Identities=16% Similarity=0.318 Sum_probs=59.0
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC--CeEEEEEeCCCc------------------------hhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG--KVKLGHVDCDSE------------------------KSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~--~~~f~~v~~~~~------------------------~~l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++.+ ..+++.|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDV 106 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCC
Confidence 467999999999999999999999999999984 788999988753 468999999
Q ss_pred ccccEEEEEc-CCC
Q 015217 231 QGFPTILVFG-ADK 243 (411)
Q Consensus 231 ~~~P~i~~~~-~~~ 243 (411)
..+|+++++. .++
T Consensus 107 ~~~P~~~lid~~~G 120 (144)
T 1i5g_A 107 KSIPTLVGVEADSG 120 (144)
T ss_dssp CSSSEEEEEETTTC
T ss_pred CCCCEEEEEECCCC
Confidence 9999999997 555
No 337
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.84 E-value=1.6e-08 Score=81.19 Aligned_cols=67 Identities=21% Similarity=0.422 Sum_probs=58.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEeCCCc------------------------hhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSE------------------------KSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~------------------------~~l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++++.+. ..+.+..|+++.+ ..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 106 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNV 106 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTC
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCC
Confidence 46799999999999999999999999999998 3688988888753 468899999
Q ss_pred ccccEEEEEc-CCC
Q 015217 231 QGFPTILVFG-ADK 243 (411)
Q Consensus 231 ~~~P~i~~~~-~~~ 243 (411)
..+|+++++. .++
T Consensus 107 ~~~Pt~~lid~~~G 120 (146)
T 1o8x_A 107 ESIPTLIGVDADSG 120 (146)
T ss_dssp CSSSEEEEEETTTC
T ss_pred CCCCEEEEEECCCC
Confidence 9999999997 555
No 338
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.83 E-value=1.7e-08 Score=84.80 Aligned_cols=90 Identities=18% Similarity=0.302 Sum_probs=73.3
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-----------------------------CchhHHhh
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----------------------------SEKSLMSK 227 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----------------------------~~~~l~~~ 227 (411)
..++++|.||++||++|+...+.+.++.+.+.+++.+..|+++ .+..+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 3579999999999999999999999999999887888888873 34568899
Q ss_pred CccccccEEEEEcCCCCCcccccCC----------CCHHHHHHHHHHHhhh
Q 015217 228 FNVQGFPTILVFGADKDSPIPYEGA----------RTAGAIESFALEQLET 268 (411)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~----------~~~~~i~~fi~~~~~~ 268 (411)
|++..+|+++++..++. +.+.|. .+.++|.+.|.+.+..
T Consensus 112 ~~v~~~P~~~lid~~G~--i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 112 YRALRTPEVFLFDERRL--LRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp TTCCEESEEEEECTTCB--EEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred cCCCCCCeEEEECCCCc--EEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 99999999999966553 333343 3678899998887653
No 339
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.82 E-value=1.8e-08 Score=92.71 Aligned_cols=93 Identities=13% Similarity=0.178 Sum_probs=79.2
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC---------------------------chhHHhhC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS---------------------------EKSLMSKF 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~---------------------------~~~l~~~~ 228 (411)
..++++|.||++||++|+...+.+.++++.+.+ .+.+..|+++. +..+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 367999999999999999999999999999987 58999888642 35688999
Q ss_pred ccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhhc
Q 015217 229 NVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLETN 269 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~~ 269 (411)
++..+|+++++..++.....+.|..+.+.+.++|.+.+...
T Consensus 161 gV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~lL~e~ 201 (352)
T 2hyx_A 161 RNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQLLNDA 201 (352)
T ss_dssp TCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHHHHHH
T ss_pred CCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHHHhhc
Confidence 99999999999766655667788889999999998877543
No 340
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=3.1e-08 Score=79.83 Aligned_cols=87 Identities=13% Similarity=0.274 Sum_probs=71.1
Q ss_pred CCCeEEEEEeCCCChh--hhhhhHHHHHHHHHh-cCC-eEEEEEeCCCch-------------------------hHHhh
Q 015217 177 SKDLWIVEFFAPWCGH--CKKLAPEWKKAANNL-KGK-VKLGHVDCDSEK-------------------------SLMSK 227 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~--c~~~~~~~~~~a~~~-~~~-~~f~~v~~~~~~-------------------------~l~~~ 227 (411)
.+++++|.||++||++ |+...+.+.++.+.| .++ +.+..|+.+... .+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 3579999999999999 999999999999999 664 999999887654 78899
Q ss_pred CccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 228 FNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 228 ~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
|++..+|+++++..++.....+ .+.+.+.+.+.+.+
T Consensus 112 ~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ll 147 (150)
T 3fw2_A 112 YSIYKIPANILLSSDGKILAKN---LRGEELKKKIENIV 147 (150)
T ss_dssp TTCCSSSEEEEECTTSBEEEES---CCHHHHHHHHHHHH
T ss_pred cCCCccCeEEEECCCCEEEEcc---CCHHHHHHHHHHHH
Confidence 9999999999997666323333 26778888877654
No 341
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.81 E-value=7.5e-09 Score=87.61 Aligned_cols=89 Identities=11% Similarity=0.085 Sum_probs=71.2
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------------------------cHhHHHhcC
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------HQSLAQEYG 99 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------------------------~~~~~~~~~ 99 (411)
++++++|.|| ++||++|+...|.+.++.+.+++ ++.++.|+++. +..+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 5789999999 99999999999999999999876 58888888763 346888999
Q ss_pred CC-----cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHHH
Q 015217 100 IR-----GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQI 135 (411)
Q Consensus 100 i~-----~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~~ 135 (411)
+. ++|+++++. +|+...++.|.. +.+.+.+.+.+..
T Consensus 124 v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 124 VLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp CBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred CcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 99 999999995 566556666654 4566666666543
No 342
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.81 E-value=1e-08 Score=85.23 Aligned_cols=88 Identities=16% Similarity=0.256 Sum_probs=72.2
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC-----------------------CCchhHHhhCccccc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-----------------------DSEKSLMSKFNVQGF 233 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-----------------------~~~~~l~~~~~v~~~ 233 (411)
..++++|.||++||++|+...+.+.++++. .+.+..|++ +.+..+++.|++..+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 133 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGA 133 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCC
Confidence 367899999999999999999999999887 477777764 334568888999999
Q ss_pred cEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 234 PTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 234 P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
|+++++..++.....+.|..+.+.+.+++.+.+.
T Consensus 134 P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 134 PETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp CEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred CeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 9999997766656677898899998888877654
No 343
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.80 E-value=1.1e-08 Score=85.72 Aligned_cols=102 Identities=12% Similarity=-0.027 Sum_probs=73.0
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-----------cHhHHHhcC
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------HQSLAQEYG 99 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-----------~~~~~~~~~ 99 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++. -.+++++++
T Consensus 34 l~~~~G~~v~-l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 112 (185)
T 2gs3_A 34 AKDIDGHMVN-LDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 112 (185)
T ss_dssp EEBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTT
T ss_pred eEcCCCCEee-HHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcC
Confidence 3344444444 2223678999999999999999999999999999986 48999998752 123444433
Q ss_pred C------------------------------------CcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHH
Q 015217 100 I------------------------------------RGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 100 i------------------------------------~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+ +..|+.+++. +|+.+.++.|..+.+.+.+.+.+.
T Consensus 113 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 184 (185)
T 2gs3_A 113 VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 184 (185)
T ss_dssp CCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHHH
T ss_pred CCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHHh
Confidence 2 2247877774 566677888988888888777654
No 344
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.79 E-value=2.1e-08 Score=80.19 Aligned_cols=67 Identities=18% Similarity=0.392 Sum_probs=58.5
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc--CCeEEEEEeCCCc------------------------hhHHhhCcc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK--GKVKLGHVDCDSE------------------------KSLMSKFNV 230 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~--~~~~f~~v~~~~~------------------------~~l~~~~~v 230 (411)
.+++++|.||++||++|+...+.+.++++.+. ..+.+..|+++.+ ..++++|++
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 106 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGV 106 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCC
Confidence 46789999999999999999999999999998 4688888888763 368899999
Q ss_pred ccccEEEEEc-CCC
Q 015217 231 QGFPTILVFG-ADK 243 (411)
Q Consensus 231 ~~~P~i~~~~-~~~ 243 (411)
..+|+++++. .++
T Consensus 107 ~~~Pt~~lid~~~G 120 (144)
T 1o73_A 107 ESIPTLITINADTG 120 (144)
T ss_dssp CSSSEEEEEETTTC
T ss_pred CCCCEEEEEECCCC
Confidence 9999999998 555
No 345
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.79 E-value=5e-09 Score=88.91 Aligned_cols=88 Identities=9% Similarity=0.110 Sum_probs=69.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|+...|.+.++.+.+++ ++.++.|+++. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 5789999999 99999999999999999998875 58888888763 347889
Q ss_pred hcCCC-----cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHH
Q 015217 97 EYGIR-----GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~-----~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
.|++. ++|+++++. +|+...++.|.. +.+.+.+.+.+.
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 999999996 565556666655 445566555543
No 346
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.78 E-value=3.7e-08 Score=82.54 Aligned_cols=91 Identities=16% Similarity=0.353 Sum_probs=74.1
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhc-CCeEEEEEeCCCc-----hhHHhhCccc-------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLK-GKVKLGHVDCDSE-----KSLMSKFNVQ------------------- 231 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~-~~~~f~~v~~~~~-----~~l~~~~~v~------------------- 231 (411)
..++++|.||++||++|+...+.+.++.+.+. ..+.+..|+++.. ..+++++++.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 45799999999999999999999999999998 4689999988765 4566777764
Q ss_pred ----cccEEEEEcCCCCCcccccCCCC--HHHHHHHHHHHhh
Q 015217 232 ----GFPTILVFGADKDSPIPYEGART--AGAIESFALEQLE 267 (411)
Q Consensus 232 ----~~P~i~~~~~~~~~~~~y~g~~~--~~~i~~fi~~~~~ 267 (411)
.+|+++++..++.....+.|..+ .+++.++|.+.+.
T Consensus 139 ~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 78999999766655667778654 6889999887764
No 347
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.78 E-value=1.6e-08 Score=86.43 Aligned_cols=89 Identities=13% Similarity=0.012 Sum_probs=68.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc--------c---HhHHH------hcC---------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE--------H---QSLAQ------EYG--------- 99 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~--------~---~~~~~------~~~--------- 99 (411)
+++++||.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .++++ +++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 125 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKC 125 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHHHHHHHHhcccccccccceEEEEEe
Confidence 688999999999999999999999999999986 48999998851 1 12333 333
Q ss_pred --------------------------------------------CCcccEEEEEe-CCCCCcccCCCCCcchhHHHHHHH
Q 015217 100 --------------------------------------------IRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 100 --------------------------------------------i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+.+.|+.+++. +|+...++.|..+.+.+.+.+.+.
T Consensus 126 d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~l 205 (208)
T 2f8a_A 126 EVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEAL 205 (208)
T ss_dssp CCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred ecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 23347767774 566677888999999988888766
Q ss_pred H
Q 015217 135 I 135 (411)
Q Consensus 135 ~ 135 (411)
+
T Consensus 206 l 206 (208)
T 2f8a_A 206 L 206 (208)
T ss_dssp H
T ss_pred h
Confidence 4
No 348
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.78 E-value=6e-09 Score=87.24 Aligned_cols=100 Identities=15% Similarity=0.049 Sum_probs=70.5
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------c----HhHHHhc-
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------H----QSLAQEY- 98 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------~----~~~~~~~- 98 (411)
+..++++.+. ...-++++++|.||++||++|+...|.+.++.+.+++ .+.++.|+++. . .++++++
T Consensus 32 l~~~~G~~~~-l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~ 110 (183)
T 2obi_A 32 AKDIDGHMVN-LDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYN 110 (183)
T ss_dssp EEBTTSCEEE-GGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTT
T ss_pred EEcCCCCEee-HHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcC
Confidence 3344555444 2223689999999999999999999999999999986 48999998752 1 1222222
Q ss_pred ------------------------------C-----CCcccEEEEEe-CCCCCcccCCCCCcchhHHHHH
Q 015217 99 ------------------------------G-----IRGFPTIKVFV-PGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 99 ------------------------------~-----i~~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
+ +.+.|+++++. +|+.+.++.|..+.+.+.+.+.
T Consensus 111 ~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 111 VKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp CCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred CCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 3 33358888884 5666777888888777666554
No 349
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.76 E-value=3.5e-08 Score=81.83 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=65.4
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEe---------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--------------------------------------- 87 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd--------------------------------------- 87 (411)
.++++++.|+.+||++|+.++|.+.++.+.+.+ +.+...+
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 467899999999999999999999999988765 5554443
Q ss_pred ------------------------------ccccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 88 ------------------------------ANEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 88 ------------------------------~~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
...+.++++++||.++|++++ +|+ .+.|..+.+.+.+.+.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 223346788999999999876 553 5678888888888887655
No 350
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.75 E-value=2.2e-08 Score=86.08 Aligned_cols=82 Identities=24% Similarity=0.367 Sum_probs=62.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEe---------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALD--------------------------------------- 87 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd--------------------------------------- 87 (411)
.++++++.||++||++|++++|.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999998763 23333221
Q ss_pred -c----cccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHH
Q 015217 88 -A----NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 88 -~----~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
| +++.++++++||+++|++ ++.+|. .+.|..+.+.|.+++.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHhh
Confidence 2 244578999999999998 555663 5678888888988887654
No 351
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.73 E-value=6.9e-09 Score=92.18 Aligned_cols=71 Identities=20% Similarity=0.433 Sum_probs=58.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC------CchhHHhhCccccccEEEEEcCCCCCcccccCCCCH
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTA 255 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~ 255 (411)
+|.||++||++|+.+.|.|+++++++. .++|+ .+++++++|+|+++||+++ +|. .|.|..+.
T Consensus 201 vV~F~A~WC~~Ck~l~p~le~lA~~l~------~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~----~~~G~~~~ 268 (291)
T 3kp9_A 201 GTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR----TYTGVRSL 268 (291)
T ss_dssp CEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE----EEESCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHcC------EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE----EecCCCCH
Confidence 689999999999999999999997663 45554 2678999999999999665 332 38999999
Q ss_pred HHHHHHHHH
Q 015217 256 GAIESFALE 264 (411)
Q Consensus 256 ~~i~~fi~~ 264 (411)
+++.+|+..
T Consensus 269 ~~L~~~l~~ 277 (291)
T 3kp9_A 269 EALAVASGY 277 (291)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHCC
Confidence 999988643
No 352
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.72 E-value=5e-08 Score=84.03 Aligned_cols=88 Identities=14% Similarity=0.322 Sum_probs=72.4
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC-----------------------------CchhHHhhCc
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-----------------------------SEKSLMSKFN 229 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-----------------------------~~~~l~~~~~ 229 (411)
+++|.||++||++|+...+.+.++++.|.++ +.|..|+++ .+..+++.|+
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~ 140 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYG 140 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHT
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcC
Confidence 6999999999999999999999999999875 999999883 3567899999
Q ss_pred cccccEEEEEcCCCCCcccccC-----------CCCHHHHHHHHHHHhhhc
Q 015217 230 VQGFPTILVFGADKDSPIPYEG-----------ARTAGAIESFALEQLETN 269 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g-----------~~~~~~i~~fi~~~~~~~ 269 (411)
+..+|+++++..++ .+.|.| ..+.++|.+.|.+.+...
T Consensus 141 v~~~P~~~liD~~G--~i~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll~~~ 189 (218)
T 3u5r_E 141 AACTPDFFLYDRER--RLVYHGQFDDARPGNGKDVTGADLRAAVDAVLKGK 189 (218)
T ss_dssp CCEESEEEEECTTC--BEEEEECSSSCCTTSCCCCCCHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEECCCC--cEEEeccccccccccccccCHHHHHHHHHHHHcCC
Confidence 99999999996665 344554 345688888888876543
No 353
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.70 E-value=7.4e-08 Score=78.77 Aligned_cols=91 Identities=12% Similarity=0.225 Sum_probs=75.1
Q ss_pred CCCeEEEEEeCCCChh-hhhhhHHHHHHHHHhcC-----CeEEEEEeCCCc----------------------------h
Q 015217 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLKG-----KVKLGHVDCDSE----------------------------K 222 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~-c~~~~~~~~~~a~~~~~-----~~~f~~v~~~~~----------------------------~ 222 (411)
..++++|.||++||++ |....+.+.++.+.+.. .+.+..|+++.. .
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3579999999999998 99999999999999964 688888887642 1
Q ss_pred hHHhhCcccccc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 223 SLMSKFNVQGFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 223 ~l~~~~~v~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+++.||+...| +++++..++.....+.|..+.++|.+.|.+.+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~ 161 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHMR 161 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHHG
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 378889999888 788887666656777888899999998887654
No 354
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.70 E-value=7.5e-08 Score=81.71 Aligned_cols=105 Identities=11% Similarity=0.089 Sum_probs=73.8
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCChh-hhhhhHHHHHHHHHhC----CCeEEEEEeccc---------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCGH-CQALTPIWEKAATVLK----GVATVAALDANE--------------- 90 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~-C~~~~~~~~~~~~~~~----~~i~~~~vd~~~--------------- 90 (411)
.+...+++.+. ...-++++++|.||++||++ |....|.+.++.+.+. +++.++.|+++.
T Consensus 25 ~l~d~~G~~v~-l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~ 103 (200)
T 2b7k_A 25 HLEDMYGNEFT-EKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDF 103 (200)
T ss_dssp EEEETTSCEEE-GGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTS
T ss_pred EEEcCCCCEEe-HHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHc
Confidence 34455555554 22236889999999999997 9999999999877664 367888887762
Q ss_pred -------------cHhHHHhcCCC-ccc---------------EEEEE-eCCCCCcccCCCCCcchhHHHHHHHHH
Q 015217 91 -------------HQSLAQEYGIR-GFP---------------TIKVF-VPGKPPVDYQGARDVKPIAEFALQQIK 136 (411)
Q Consensus 91 -------------~~~~~~~~~i~-~~P---------------~~~~~-~~g~~~~~~~g~~~~~~l~~~~~~~~~ 136 (411)
...+++.||+. +.| +++++ ++|+....+.|..+.+.+.+.+.+.++
T Consensus 104 ~~~~~~l~~~~d~~~~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 104 HPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp CTTCEEEECCHHHHHHHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred CCCceEEeCCHHHHHHHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 13577888887 344 55666 456666677888888888888877764
No 355
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.69 E-value=1.2e-07 Score=78.00 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=75.0
Q ss_pred CCeEEEEEeCCCChh-hhhhhHHHHHHHHHhc-----CCeEEEEEeCCCc----------------------------hh
Q 015217 178 KDLWIVEFFAPWCGH-CKKLAPEWKKAANNLK-----GKVKLGHVDCDSE----------------------------KS 223 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~-c~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~----------------------------~~ 223 (411)
.++++|.||++||++ |+...+.+.++.+.+. ..+.+..|+++.. ..
T Consensus 26 gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 105 (171)
T 2rli_A 26 GQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQ 105 (171)
T ss_dssp TSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHH
T ss_pred CCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHH
Confidence 579999999999998 9999999999999995 4688888887631 15
Q ss_pred HHhhCcccccc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhhh
Q 015217 224 LMSKFNVQGFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLET 268 (411)
Q Consensus 224 l~~~~~v~~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~~ 268 (411)
+++.|++...| +++++..++.....|.|..+.+.+.+.+.+.+..
T Consensus 106 ~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 165 (171)
T 2rli_A 106 ASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHMAA 165 (171)
T ss_dssp HHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 78889998877 8888876666566788888999999998887653
No 356
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.68 E-value=9.3e-08 Score=78.56 Aligned_cols=101 Identities=18% Similarity=0.156 Sum_probs=71.6
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhCCCeEEEEEeccc--------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPW-CGHCQALTPIWEKAATVLKGVATVAALDANE-------------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~-C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~-------------------- 90 (411)
+...+++.+. ...-++++++|.||++| |++|+...|.+.++.+.+ .++.++.|+.+.
T Consensus 29 l~~~~G~~~~-l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~ 106 (167)
T 2jsy_A 29 VLTNSLEEKS-LADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLS 106 (167)
T ss_dssp EEBTTCCEEE-HHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEE
T ss_pred EECCCCCEee-HHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEee
Confidence 3444555554 22225789999999999 999999999999999998 668888887762
Q ss_pred ---cHhHHHhcCCCc------ccEEEEEe-CCCCCcccCCC-----CCcchhHHHHHHH
Q 015217 91 ---HQSLAQEYGIRG------FPTIKVFV-PGKPPVDYQGA-----RDVKPIAEFALQQ 134 (411)
Q Consensus 91 ---~~~~~~~~~i~~------~P~~~~~~-~g~~~~~~~g~-----~~~~~l~~~~~~~ 134 (411)
+.++++.|++.. .|+.+++. +|+...++.|. .+.+.+.+.+.+.
T Consensus 107 d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 107 DHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp GGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred CCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 346788899887 49888886 45555555442 2335666666544
No 357
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.68 E-value=1.1e-07 Score=75.87 Aligned_cols=83 Identities=11% Similarity=0.179 Sum_probs=65.3
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCch--------------------------hHHhhCc
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSEK--------------------------SLMSKFN 229 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~--------------------------~l~~~~~ 229 (411)
..++++|.||++||++|+...+.+.++.+.|.+ .+.+..|+.+.+. .+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 357999999999999999999999999999986 4888888877432 4778899
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHH
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFA 262 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi 262 (411)
+..+|+.+++..++. +.+.+ ...+++.+.+
T Consensus 111 v~~~P~~~lid~~G~--i~~~~-~~~~~l~~~l 140 (143)
T 4fo5_A 111 LRKGFKNFLINDEGV--IIAAN-VTPEKLTEIL 140 (143)
T ss_dssp GGGCCCEEEECTTSB--EEEES-CCHHHHHHHH
T ss_pred CCCCCcEEEECCCCE--EEEcc-CCHHHHHHHH
Confidence 999999999976663 33332 3456666655
No 358
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.67 E-value=5.6e-08 Score=82.02 Aligned_cols=117 Identities=21% Similarity=0.340 Sum_probs=75.6
Q ss_pred cHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCcEEeCccch
Q 015217 91 HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQIKALLKERLSGKATGGSSDKSKSDSNESIELNSSNF 170 (411)
Q Consensus 91 ~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 170 (411)
....++.+||.++|++++ +|+..... +..+.+++..|+.+.+. +.+.+..+..+..... .....++
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~-~~~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~---------~~~g~~y 104 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNP-QGMDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ---------YEDGKQY 104 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECG-GGSCCSSHHHHHHHHHH--HHHHHTC------------------CCBTTTE
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCc-cccccccHHHHHHHHHH--HHHHHHhCcccccccc---------cCCCCCc
Confidence 445788999999999866 55532221 33456678787777765 4555544332221111 1122223
Q ss_pred HHHHh-cCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCCCc
Q 015217 171 DELVL-KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSE 221 (411)
Q Consensus 171 ~~~~~-~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~ 221 (411)
..... ...++.+|.||+.||++|+.+.|.+ .++++.+.+++.|..++.+.+
T Consensus 105 ~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 105 TTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp EECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred eEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 32111 2356899999999999999999999 999999988899999988653
No 359
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.66 E-value=2.5e-08 Score=74.30 Aligned_cols=79 Identities=10% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC--CchhHHhhCccccccEEEEEcCCCCCcccccCCCCH
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTA 255 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~ 255 (411)
..+.+++|+++||++|+.+.+.+.+++. .+.|..+|.+ .+++++++|| ..+|+++ .++. .. ..+..+.
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~--~~-~~~g~~~ 84 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQ--FL-MMHRVNT 84 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSS--EE-EESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCE--EE-EecCCCH
Confidence 4567899999999999999999887653 3899999998 7789999999 9999764 3433 22 3566888
Q ss_pred HHHHHHHHHHh
Q 015217 256 GAIESFALEQL 266 (411)
Q Consensus 256 ~~i~~fi~~~~ 266 (411)
+.|.+++.+.+
T Consensus 85 ~~l~~~l~~~~ 95 (100)
T 1wjk_A 85 SKLEKQLRKLS 95 (100)
T ss_dssp HHHHHHHHSSS
T ss_pred HHHHHHHHHHH
Confidence 99999987654
No 360
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.65 E-value=7.2e-08 Score=81.99 Aligned_cols=88 Identities=10% Similarity=0.129 Sum_probs=68.4
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|....+.+.++.+.+++ .+.++.|+++. ..++++
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 114 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMK 114 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHH
Confidence 5789999999 99999999999999999999875 58888888763 346888
Q ss_pred hcCCC------cccEEEEEeC-CCCCcccCCCCC----cchhHHHHHHH
Q 015217 97 EYGIR------GFPTIKVFVP-GKPPVDYQGARD----VKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~~-g~~~~~~~g~~~----~~~l~~~~~~~ 134 (411)
.|++. ++|+++++.. |+....+.|... .+++.+.+.+.
T Consensus 115 ~ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 115 SYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 99999 9999988854 554445445443 45666666544
No 361
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.65 E-value=1.1e-08 Score=72.94 Aligned_cols=58 Identities=19% Similarity=0.288 Sum_probs=47.7
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-CchhHHhhCccccccEEEE
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-SEKSLMSKFNVQGFPTILV 238 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-~~~~l~~~~~v~~~P~i~~ 238 (411)
.+++|+++||++|+.+.+.+.++++.+...+.+..++.+ ....++++||+.++|++++
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i 61 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI 61 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE
Confidence 367899999999999999999988776545666666554 4678899999999999987
No 362
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.65 E-value=9.8e-08 Score=80.77 Aligned_cols=88 Identities=11% Similarity=0.138 Sum_probs=68.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|....+.+.++.+.+++ .+.++.|+++. ..++++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 5789999999 99999999999999999999875 58888888863 236889
Q ss_pred hcCCC------cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHH
Q 015217 97 EYGIR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
.|++. .+|+++++. +|+....+.|.. +.+++.+.+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 99998 799988885 455455555543 345666666554
No 363
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.65 E-value=6.5e-08 Score=82.74 Aligned_cols=80 Identities=23% Similarity=0.337 Sum_probs=60.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEE--e-------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAAL--D------------------------------------- 87 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~v--d------------------------------------- 87 (411)
.++++++.|+.+||++|+++++.+.++.+. + +.+..+ .
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 467899999999999999999999997652 3 333322 1
Q ss_pred -c----cccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHH
Q 015217 88 -A----NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 88 -~----~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
| +++.++++++||+++|++++ .+|+ .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHh
Confidence 1 13457889999999999876 6665 56788888888887754
No 364
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.61 E-value=1.3e-07 Score=79.75 Aligned_cols=87 Identities=16% Similarity=0.186 Sum_probs=66.4
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|....+.+.++.+.+++ .+.++.|+++. ..++++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 5789999999 99999999999999999998863 58888887762 246888
Q ss_pred hcCCC-----cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHH
Q 015217 97 EYGIR-----GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQ 133 (411)
Q Consensus 97 ~~~i~-----~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~ 133 (411)
.||+. .+|++++++ +|+....+.|.. +.+.+.+.+.+
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHH
Confidence 99999 899999995 455444555543 34455555544
No 365
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.59 E-value=1.5e-07 Score=79.28 Aligned_cols=90 Identities=26% Similarity=0.308 Sum_probs=70.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------------------------- 89 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~------------------------------------- 89 (411)
.++++++.|+.+||++|+.++|.+.++.+.+.+++.|..+...
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~~~~aa~a~~aa~~~g~~~~~~~~lf~~~~~~~~ 103 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPALFGGIWNVHGQMFLTLESMGVEHDVHNAVFEAIHKEHK 103 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCCSTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEehhhccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCc
Confidence 5789999999999999999999999999998877777655431
Q ss_pred ------------------------------------ccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHH
Q 015217 90 ------------------------------------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQ 133 (411)
Q Consensus 90 ------------------------------------~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~ 133 (411)
.+...++++||.++|++++ +|+......|..+.+.+.+.+..
T Consensus 104 ~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~ 181 (192)
T 3h93_A 104 KLATPEEMADFLAGKGVDKEKFLSTYNSFAIKGQMEKAKKLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADY 181 (192)
T ss_dssp CCCSHHHHHHHHHTTTCCHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHhhCHHHHHHHHHHHHHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHH
Confidence 0114567789999999876 67655555577888888888877
Q ss_pred HHHHH
Q 015217 134 QIKAL 138 (411)
Q Consensus 134 ~~~~~ 138 (411)
.+...
T Consensus 182 l~~k~ 186 (192)
T 3h93_A 182 LIEKE 186 (192)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 366
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.58 E-value=2e-07 Score=76.03 Aligned_cols=76 Identities=14% Similarity=0.147 Sum_probs=63.7
Q ss_pred CCe-EEEEEe-CCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC---------------------CchhHHhhCcccc-
Q 015217 178 KDL-WIVEFF-APWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD---------------------SEKSLMSKFNVQG- 232 (411)
Q Consensus 178 ~~~-~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~---------------------~~~~l~~~~~v~~- 232 (411)
.+. ++|.|| ++||++|+...+.+.++++.+.++ +.+..|+.+ .+..+++.|++.+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 107 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGF 107 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCS
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCc
Confidence 444 899999 999999999999999999999875 889888877 4567889999998
Q ss_pred ---ccEEEEEcCCCCCcccccCCC
Q 015217 233 ---FPTILVFGADKDSPIPYEGAR 253 (411)
Q Consensus 233 ---~P~i~~~~~~~~~~~~y~g~~ 253 (411)
+|+.+++..++.....+.|..
T Consensus 108 ~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 108 ILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp SSCCCEEEEECTTSBEEEEEECSS
T ss_pred CcccceEEEECCCCEEEEEEecCC
Confidence 999999977665556677743
No 367
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.58 E-value=1.8e-07 Score=80.76 Aligned_cols=79 Identities=15% Similarity=0.221 Sum_probs=63.4
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.||+ +||++|....|.+.++.+.+++ .+.++.|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 68899999996 9999999999999999999976 48888888863 225788
Q ss_pred hcCCC------cccEEEEEe-CCCCCcccCCCCCcc
Q 015217 97 EYGIR------GFPTIKVFV-PGKPPVDYQGARDVK 125 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~-~g~~~~~~~g~~~~~ 125 (411)
.|++. .+|++++++ +|+....+.|....+
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~ 183 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVG 183 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBC
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCC
Confidence 89998 899999986 455555665655444
No 368
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.57 E-value=1.6e-07 Score=80.41 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=67.1
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|....+.+.++.+.+++ ++.++.|+++. ..++++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 6789999999 99999999999999999998863 58888887653 346888
Q ss_pred hcCCC-----cccEEEEEeC-CCCCcccCCCC----CcchhHHHHHHH
Q 015217 97 EYGIR-----GFPTIKVFVP-GKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~-----~~P~~~~~~~-g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
.||+. .+|+++++.. |+....+.|.. +.+++.+.+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999 8999888864 55444444433 355666666544
No 369
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.57 E-value=8.6e-08 Score=82.60 Aligned_cols=88 Identities=11% Similarity=0.178 Sum_probs=67.5
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
++++++|.|| ++||++|+...+.+.++.+.+++ .+.++.|+++. ..++++
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~ 134 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISR 134 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHH
Confidence 5699999999 99999999999999999999864 58888887753 246889
Q ss_pred hcCCC------cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHH
Q 015217 97 EYGIR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
.|++. .+|++++++ +|+....+.|.. +.+++.+.+...
T Consensus 135 ~ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 135 DYGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99999 999999995 455444445543 335565555543
No 370
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.55 E-value=2.3e-07 Score=76.90 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=64.3
Q ss_pred CCCeEEEEEECCC-ChhhhhhhHHHHHHHHHhCCCeEEEEEeccc----------------------cHhHHHhcCCCcc
Q 015217 47 ANGVVLVEFYAPW-CGHCQALTPIWEKAATVLKGVATVAALDANE----------------------HQSLAQEYGIRGF 103 (411)
Q Consensus 47 ~~~~~~v~f~~~~-C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~----------------------~~~~~~~~~i~~~ 103 (411)
++++++|.||++| |++|+...|.+.++.+. .++.++.|+.+. +..+++.|++...
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~ 120 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIA 120 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBC
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCccc
Confidence 5789999999999 99999999999999988 557888887762 2468889999877
Q ss_pred ---------cEEEEEe-CCCCCcccCC--CCCcchhHHHHHHH
Q 015217 104 ---------PTIKVFV-PGKPPVDYQG--ARDVKPIAEFALQQ 134 (411)
Q Consensus 104 ---------P~~~~~~-~g~~~~~~~g--~~~~~~l~~~~~~~ 134 (411)
|+.+++. +|+....+.| ......+.+++...
T Consensus 121 ~~~~~g~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l~~l 163 (175)
T 1xvq_A 121 DGPMAGLLARAIVVIGADGNVAYTELVPEIAQEPNYEAALAAL 163 (175)
T ss_dssp SSTTTTSBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHHHHH
T ss_pred ccccCCcccceEEEECCCCeEEEEEECCCcCCCCCHHHHHHHH
Confidence 8888875 4655555543 33444566665543
No 371
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.55 E-value=4.4e-07 Score=76.58 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=39.1
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN 89 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~ 89 (411)
..++++++.|+.+||++|+.+.|.+.++.+.+.+++.+..++..
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 35789999999999999999999999999998887888777764
No 372
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.54 E-value=9.1e-08 Score=78.89 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=69.9
Q ss_pred CCCeEEEEEeCCCChh-hhhhhHHHHHHHHHhcC----CeEEEEEeCCCc----------------------------hh
Q 015217 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLKG----KVKLGHVDCDSE----------------------------KS 223 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~-c~~~~~~~~~~a~~~~~----~~~f~~v~~~~~----------------------------~~ 223 (411)
..++++|.||++||++ |+...+.+.++.+.+.. ++.+..|+++.+ ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 3579999999999997 99999999999999984 699999987642 24
Q ss_pred HHhhCc---------------cccccEEEEEcCCCCCcccccCCC--CHHHHHHHHHHH
Q 015217 224 LMSKFN---------------VQGFPTILVFGADKDSPIPYEGAR--TAGAIESFALEQ 265 (411)
Q Consensus 224 l~~~~~---------------v~~~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~ 265 (411)
+++.|+ +..+|+++++. ++.....+.|.. +.+.|.+.|.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHHh
Confidence 555555 45789999999 776566677776 788888887653
No 373
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.54 E-value=3.4e-07 Score=76.94 Aligned_cols=91 Identities=16% Similarity=0.159 Sum_probs=71.8
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC--------ch---hHH-h-----------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EK---SLM-S----------------- 226 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~---~l~-~----------------- 226 (411)
..++++|.||++||++|+...+.+.++.+.+.++ +.+..|+++. .. ..+ +
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4578999999999999999999999999999875 9999998762 11 122 1
Q ss_pred ------------hCcccccc------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 227 ------------KFNVQGFP------TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 227 ------------~~~v~~~P------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+++..+| +.+++..++.....+.|..+.+.+.+.|.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 185 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLLE 185 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHh
Confidence 14777788 888887666656677888889999999887764
No 374
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.53 E-value=3.9e-07 Score=74.44 Aligned_cols=75 Identities=9% Similarity=0.149 Sum_probs=58.9
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc---------------------cHhHHHhcCCCc-
Q 015217 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------HQSLAQEYGIRG- 102 (411)
Q Consensus 47 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~---------------------~~~~~~~~~i~~- 102 (411)
++++++|.||+ +||++|....+.+.++.+.+++ .+.++.|.++. ..++++.||+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 113 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKE 113 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEE
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccc
Confidence 57799999998 9999999999999999998875 47788787762 236778888877
Q ss_pred -----------ccEEEEEeC-CCCCcccCCC
Q 015217 103 -----------FPTIKVFVP-GKPPVDYQGA 121 (411)
Q Consensus 103 -----------~P~~~~~~~-g~~~~~~~g~ 121 (411)
.|+.++++. |+....+.+.
T Consensus 114 ~~~~~~~~~~~~p~~~lid~~G~i~~~~~~~ 144 (163)
T 3gkn_A 114 KNMYGKQVLGIERSTFLLSPEGQVVQAWRKV 144 (163)
T ss_dssp EEETTEEEEEECCEEEEECTTSCEEEEECSC
T ss_pred cccccccccCcceEEEEECCCCeEEEEEcCC
Confidence 899999965 5544455443
No 375
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.52 E-value=1e-07 Score=78.75 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=69.0
Q ss_pred EEeCccchhHHHhcCCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhCC---CeEEEEEeccc---cH-------------
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFYAPWCG-HCQALTPIWEKAATVLKG---VATVAALDANE---HQ------------- 92 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~~~~C~-~C~~~~~~~~~~~~~~~~---~i~~~~vd~~~---~~------------- 92 (411)
..++.+.+. ...-++++++|.||++||+ +|....+.+.++.+.+++ ++.++.|+++. .+
T Consensus 19 ~~~~G~~~~-l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~ 97 (174)
T 1xzo_A 19 QNQDGKNVS-LESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLS 97 (174)
T ss_dssp ECTTSCEEE-TGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCC
T ss_pred EcCCCCEEe-hhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 334444443 2223688999999999999 999999999999988864 38899888862 11
Q ss_pred ------------hHHHh----------------cCCCcccEEEEEe-CCCCCcccCCCC--CcchhHHHHHHHH
Q 015217 93 ------------SLAQE----------------YGIRGFPTIKVFV-PGKPPVDYQGAR--DVKPIAEFALQQI 135 (411)
Q Consensus 93 ------------~~~~~----------------~~i~~~P~~~~~~-~g~~~~~~~g~~--~~~~l~~~~~~~~ 135 (411)
++.+. +++.+.|+++++. +|+...++.|.. +.+.+.+.+.+.+
T Consensus 98 ~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 98 FDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp GGGEEEEBCSCHHHHHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred CcceEEEeCCCHHHHHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 11222 2356688877775 465566677765 3566777766543
No 376
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.51 E-value=2.6e-07 Score=76.18 Aligned_cols=89 Identities=12% Similarity=0.166 Sum_probs=68.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC-------Cc----hhHH-------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD-------SE----KSLM------------------- 225 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~-------~~----~~l~------------------- 225 (411)
..++++|.||++||++|+ ..+.+.++.+.+.++ +.+..|+++ .. ...+
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 457999999999999999 999999999999875 888888763 10 1112
Q ss_pred -----------hhCcccccc------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 226 -----------SKFNVQGFP------TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 226 -----------~~~~v~~~P------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+.|++..+| +.+++..++.....+.|..+.+.+.+.|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 246788889 88888766665677788888889988888765
No 377
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=1.3e-08 Score=83.06 Aligned_cols=87 Identities=18% Similarity=0.251 Sum_probs=62.8
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHH-HHHHhc--CCeEEEEEeCCCchhHHhhCc------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKK-AANNLK--GKVKLGHVDCDSEKSLMSKFN------------------------ 229 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~-~a~~~~--~~~~f~~v~~~~~~~l~~~~~------------------------ 229 (411)
.+++++|.||++||++|+...+.+.+ +...+. ..+.++.|+++...+.+++|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 35689999999999999999999998 888886 358888888776544444333
Q ss_pred cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 230 VQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 230 v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
+.++|+++++..++.....+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKIVKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 5668999999655544455555 455566655544
No 378
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.90 E-value=1.3e-08 Score=81.21 Aligned_cols=67 Identities=19% Similarity=0.466 Sum_probs=55.9
Q ss_pred CC-eEEEEEeCCCChhhhhhhHHHHHHHHHhc---CCeEEEEEeCCCc-------------------------hhHHhhC
Q 015217 178 KD-LWIVEFFAPWCGHCKKLAPEWKKAANNLK---GKVKLGHVDCDSE-------------------------KSLMSKF 228 (411)
Q Consensus 178 ~~-~~lv~f~~~~c~~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~~-------------------------~~l~~~~ 228 (411)
++ +++|.||++||++|+...+.+.++++.++ ..+.+..|+++.. ..+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 45 89999999999999999999999999983 3577777776644 3688999
Q ss_pred ccccccEEEEEcCCCC
Q 015217 229 NVQGFPTILVFGADKD 244 (411)
Q Consensus 229 ~v~~~P~i~~~~~~~~ 244 (411)
++..+|+++++..++.
T Consensus 105 ~v~~~P~~~lid~~G~ 120 (143)
T 2lus_A 105 GITGIPALVIVKKDGT 120 (143)
Confidence 9999999999975553
No 379
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.48 E-value=6e-07 Score=73.64 Aligned_cols=91 Identities=16% Similarity=0.232 Sum_probs=68.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC-------c-h---hH-HhhC---------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E-K---SL-MSKF--------------- 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~-~---~l-~~~~--------------- 228 (411)
..++++|.||++||++|+...+.+.++.+.+.++ +.+..|+++. . . .. .+++
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4579999999999999999999999999999874 9999998752 1 1 12 1222
Q ss_pred --------------c-----cccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 229 --------------N-----VQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 229 --------------~-----v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
| +..+|+.+++..++.....+.|..+.+.+.+.|.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 167 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELLE 167 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHhc
Confidence 2 33357888887766656677888888888888877653
No 380
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.48 E-value=4.7e-07 Score=74.40 Aligned_cols=90 Identities=12% Similarity=0.226 Sum_probs=70.0
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC--------ch---hHHh-hC---------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EK---SLMS-KF--------------- 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~---~l~~-~~--------------- 228 (411)
..++++|.||++||++|+...+.+.++++.+.++ +.+..|+++. .. ..++ ++
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4679999999999999999999999999999875 9999998752 11 2233 33
Q ss_pred --------------cc--cccc---EEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 229 --------------NV--QGFP---TILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 229 --------------~v--~~~P---~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
++ ..+| +.+++..++.....+.|..+.+.+.+.|.+.+
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 33 4568 88888766665667788888888988887765
No 381
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.47 E-value=3.4e-07 Score=77.24 Aligned_cols=89 Identities=11% Similarity=0.128 Sum_probs=72.6
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC-------------------------chhHHhhCcc
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-------------------------EKSLMSKFNV 230 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-------------------------~~~l~~~~~v 230 (411)
.++++|.|| ++||++|+...+.+.++.+.+.+ .+.+..|+.+. +..+++.|++
T Consensus 45 gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v 124 (195)
T 2bmx_A 45 GKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGV 124 (195)
T ss_dssp TCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTC
T ss_pred CCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCC
Confidence 578999999 99999999999999999999987 48888888764 3457888999
Q ss_pred c-----cccEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHh
Q 015217 231 Q-----GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (411)
Q Consensus 231 ~-----~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (411)
. .+|+++++..++.....+.|.. +.+++.+.+.+..
T Consensus 125 ~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 125 LNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp BCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred cccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9 8999999976665455555654 6788888887764
No 382
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.47 E-value=2.7e-07 Score=80.58 Aligned_cols=86 Identities=16% Similarity=0.246 Sum_probs=63.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec--------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA-------------------------------------- 88 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~-------------------------------------- 88 (411)
..+.+++.|+.+||++|+++++.+.++.+. +++.+..+..
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 356789999999999999999999987764 5566554332
Q ss_pred ------------cccHhHHHhcCCCcccEEEEEeC-CCCCcccCCCCCcchhHHHHHHHH
Q 015217 89 ------------NEHQSLAQEYGIRGFPTIKVFVP-GKPPVDYQGARDVKPIAEFALQQI 135 (411)
Q Consensus 89 ------------~~~~~~~~~~~i~~~P~~~~~~~-g~~~~~~~g~~~~~~l~~~~~~~~ 135 (411)
+++.++++++||.++|++++... |+ .....|..+.+.+.+++.+..
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 12346788999999999888763 43 346788888888888876543
No 383
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.46 E-value=3.3e-07 Score=76.79 Aligned_cols=91 Identities=18% Similarity=0.154 Sum_probs=73.0
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC-------------------------chhHHhhCc
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-------------------------EKSLMSKFN 229 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-------------------------~~~l~~~~~ 229 (411)
..++++|.|| ++||++|....+.+.++++.|.+ .+.+..|+.+. +..+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3578999999 99999999999999999999986 48888888764 346888999
Q ss_pred cc------cccEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHhh
Q 015217 230 VQ------GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQLE 267 (411)
Q Consensus 230 v~------~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~~ 267 (411)
+. .+|+++++..++.....+.|.. +.+++.+.+.+...
T Consensus 110 v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~~ 157 (187)
T 1we0_A 110 VLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKAAQY 157 (187)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHHHHH
T ss_pred CCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHhh
Confidence 98 8999999976665455555643 67888888876654
No 384
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.46 E-value=5.5e-07 Score=76.96 Aligned_cols=56 Identities=18% Similarity=0.157 Sum_probs=43.7
Q ss_pred cEEeC-ccchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecc
Q 015217 32 VVQLT-PNNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDAN 89 (411)
Q Consensus 32 ~~~l~-~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~ 89 (411)
+..++ .+.+. ...-+++++||.||++||++|+ ..|.|.++.+.+++ .+.++.|.|+
T Consensus 40 l~d~~~G~~v~-Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 40 AIALNKNEYVS-FKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp EEBSSSSCEEE-GGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred eeeCCCCCEEc-HHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 33444 44444 2333689999999999999998 89999999999975 5888888875
No 385
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.46 E-value=4.3e-08 Score=75.22 Aligned_cols=79 Identities=14% Similarity=0.189 Sum_probs=54.2
Q ss_pred CeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc-----hhHHhhCccccccEEEEEcCCCCCcccccCCC
Q 015217 179 DLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE-----KSLMSKFNVQGFPTILVFGADKDSPIPYEGAR 253 (411)
Q Consensus 179 ~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~-----~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~ 253 (411)
+.+++ ||++||++|+.+.+.+.+++.. +.+..++.+.+ ..++++||+.++|++ + .+|. ....+.|..
T Consensus 20 ~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~-~-~~g~-~v~~~~~~~ 91 (116)
T 2e7p_A 20 APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTGRGTVPNV-F-IGGK-QIGGCDTVV 91 (116)
T ss_dssp SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE-E-ETTE-EEECHHHHH
T ss_pred CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhCCCCcCEE-E-ECCE-EECChHHHH
Confidence 34444 9999999999999999887543 45666665554 468999999999999 3 3332 233344332
Q ss_pred ---CHHHHHHHHHHH
Q 015217 254 ---TAGAIESFALEQ 265 (411)
Q Consensus 254 ---~~~~i~~fi~~~ 265 (411)
+...|.+++.+.
T Consensus 92 ~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 92 EKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHTTCHHHHHHHT
T ss_pred HHHhCChHHHHHHHc
Confidence 445677777654
No 386
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.45 E-value=2e-07 Score=66.95 Aligned_cols=76 Identities=24% Similarity=0.286 Sum_probs=58.9
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc----hhHHhhCc--cccccEEEEEcCCCCCcccccCCCC
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE----KSLMSKFN--VQGFPTILVFGADKDSPIPYEGART 254 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~----~~l~~~~~--v~~~P~i~~~~~~~~~~~~y~g~~~ 254 (411)
.++.|+++||++|+.+.+.+.+++..+.+ +.+..+|.+.+ .++.+++| +.++|++++ ++. . .|.
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i~~--~g~--~---i~~-- 71 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKPVETVPQIFV--DQQ--H---IGG-- 71 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCCSCCSCEEEE--TTE--E---EES--
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCCCceeCeEEE--CCE--E---EEC--
Confidence 37789999999999999999999988764 88888887654 37899999 899999843 332 2 222
Q ss_pred HHHHHHHHHHHh
Q 015217 255 AGAIESFALEQL 266 (411)
Q Consensus 255 ~~~i~~fi~~~~ 266 (411)
.++|.+++.+.+
T Consensus 72 ~~~l~~~~~~~~ 83 (85)
T 1ego_A 72 YTDFAAWVKENL 83 (85)
T ss_dssp SHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 368888887765
No 387
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.44 E-value=2.4e-07 Score=78.39 Aligned_cols=90 Identities=14% Similarity=0.159 Sum_probs=72.1
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~ 226 (411)
..++++|.|| ++||++|+...+.+.++.+.|.+ .+.+..|+.+. +..+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 3578999999 99999999999999999999976 48888888764 346888
Q ss_pred hCccc-----cccEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHh
Q 015217 227 KFNVQ-----GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (411)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (411)
.|++. .+|+++++..++.....+.|.. +.+++.+.+.+..
T Consensus 112 ~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l~ 160 (198)
T 1zof_A 112 DYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDALL 160 (198)
T ss_dssp HTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHHH
T ss_pred HhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 99998 8999999976665455555654 5678888876654
No 388
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.42 E-value=8.7e-07 Score=75.34 Aligned_cols=91 Identities=12% Similarity=0.001 Sum_probs=67.3
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-----------cHhHHH------hcCCC-------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------HQSLAQ------EYGIR------- 101 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-----------~~~~~~------~~~i~------- 101 (411)
+++++||.||++||++| ...|.|.++.+.+++ .+.++.|.|+. ..++++ ++++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~i~~f~~~~~~~~~~~~~fp~l~d~ 115 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKG 115 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHHHHHHHHHTSSCTTCCCSSEEBCCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHHHHHHHHhcchhhccCccceeeeEe
Confidence 68999999999999999 688999999999975 58888888651 134555 55432
Q ss_pred ------------------------------------------cccEEEEEe-CCCCCcccCCCCCcchhHHHHHHHHHHH
Q 015217 102 ------------------------------------------GFPTIKVFV-PGKPPVDYQGARDVKPIAEFALQQIKAL 138 (411)
Q Consensus 102 ------------------------------------------~~P~~~~~~-~g~~~~~~~g~~~~~~l~~~~~~~~~~~ 138 (411)
+.|+.+++. +|+...+|.|..+++.+...+.+.+...
T Consensus 116 d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll~~~ 195 (207)
T 2r37_A 116 DVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYMRRQ 195 (207)
T ss_dssp CSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHHhhc
Confidence 015666664 4665678888888888888887776443
No 389
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.41 E-value=4.4e-07 Score=73.79 Aligned_cols=76 Identities=20% Similarity=0.158 Sum_probs=57.4
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccc---------------------cHhHHHhcCCCccc-
Q 015217 48 NGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE---------------------HQSLAQEYGIRGFP- 104 (411)
Q Consensus 48 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~---------------------~~~~~~~~~i~~~P- 104 (411)
+++++|.|| +.||++|....|.+.++.+.++++-.++.|.++. +.++++.||+...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~ 114 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL 114 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccccc
Confidence 347888887 8999999999999999999887521666666642 23688899999988
Q ss_pred ------EEEEEeCCCCCcccCCCCCc
Q 015217 105 ------TIKVFVPGKPPVDYQGARDV 124 (411)
Q Consensus 105 ------~~~~~~~g~~~~~~~g~~~~ 124 (411)
++++ ++|+....+.|....
T Consensus 115 ~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 115 SGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp SCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred CCccceEEEE-cCCEEEEEEccCCcc
Confidence 5555 778766666665443
No 390
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.40 E-value=6.3e-07 Score=74.62 Aligned_cols=89 Identities=10% Similarity=0.122 Sum_probs=67.2
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC--------chh---HHhh-----------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EKS---LMSK----------------- 227 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~~---l~~~----------------- 227 (411)
..++++|.||++||++|+...+.+.++++++.++ +.+..|+++. ... .+++
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4579999999999999999999999999999875 9999998753 111 2222
Q ss_pred -------Ccccccc-------EEEEEcCCCCCcccccCCCCHHHHHHHHHHH
Q 015217 228 -------FNVQGFP-------TILVFGADKDSPIPYEGARTAGAIESFALEQ 265 (411)
Q Consensus 228 -------~~v~~~P-------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~ 265 (411)
|++..+| +.+++..++.....+.|..+.++|.+.|.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHH
Confidence 2244568 7777766665566678888888888877653
No 391
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.40 E-value=9.1e-07 Score=71.91 Aligned_cols=85 Identities=8% Similarity=0.096 Sum_probs=66.1
Q ss_pred CeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC-----------------------chhHHhhCccc--
Q 015217 179 DLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS-----------------------EKSLMSKFNVQ-- 231 (411)
Q Consensus 179 ~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~-----------------------~~~l~~~~~v~-- 231 (411)
++++|.|| ++||++|+...+.+.++++.+.+ .+.+..|+++. +..+++.|++.
T Consensus 37 ~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 37 KNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp CEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred CCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 38999998 99999999999999999999976 58888888764 56788999998
Q ss_pred --ccc--EEEEEcCCCCCcccccCCCC----HHHHHHHHH
Q 015217 232 --GFP--TILVFGADKDSPIPYEGART----AGAIESFAL 263 (411)
Q Consensus 232 --~~P--~i~~~~~~~~~~~~y~g~~~----~~~i~~fi~ 263 (411)
++| +.+++..++.....+.|..+ .+++.+.+.
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~ 156 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALA 156 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHH
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 888 88888766655556666543 344544443
No 392
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.39 E-value=2.3e-06 Score=65.99 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=78.6
Q ss_pred CCCcEEeCc-cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhcCCCcccEEE
Q 015217 29 SSPVVQLTP-NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEYGIRGFPTIK 107 (411)
Q Consensus 29 ~~~~~~l~~-~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~P~~~ 107 (411)
...+..|++ +++. .++..+++++|-|+++||.+| .+.+.++++.+ +.+.|+.++ ++++++++++. .|+++
T Consensus 20 ~~~~~~i~s~~e~e-~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~---~~~v~~~~~v~-~~~vv 90 (124)
T 2l4c_A 20 AQEPTWLTDVPAAM-EFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGIST---DSEVLTHYNIT-GNTIC 90 (124)
T ss_dssp SCCCEECCSHHHHH-HHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEEC---CHHHHHHTTCC-SSCEE
T ss_pred CCcceEcCCHHHHH-HHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEC---hHHHHHHcCCC-CCeEE
Confidence 344555654 5666 566778999999999999999 67899999999 779998886 47799999998 89999
Q ss_pred EEeCCCC-CcccCC----CCCcchhHHHHHHH
Q 015217 108 VFVPGKP-PVDYQG----ARDVKPIAEFALQQ 134 (411)
Q Consensus 108 ~~~~g~~-~~~~~g----~~~~~~l~~~~~~~ 134 (411)
+|+.... ...|.| ..+.+.|.+|+...
T Consensus 91 lfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 91 LFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp EEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred EEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 9998643 567876 78999999999754
No 393
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.39 E-value=5.2e-07 Score=62.98 Aligned_cols=68 Identities=16% Similarity=0.312 Sum_probs=50.0
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHH---hcCCCcccEEEEEeCCCCCcccCCCCCcchhH
Q 015217 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ---EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (411)
Q Consensus 52 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~---~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (411)
++.|+++||++|++..+.+++. .+.+..+|++.++++.+ ++++.++|++++ +|+. . +..+.+.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~-~g~~~~~l~ 70 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---W-SGFRPERIK 70 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---E-ESCCHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---E-cCCCHHHHH
Confidence 6789999999999999988764 36677788887766555 899999999863 5542 2 234555555
Q ss_pred HHH
Q 015217 129 EFA 131 (411)
Q Consensus 129 ~~~ 131 (411)
+++
T Consensus 71 ~~l 73 (75)
T 1r7h_A 71 QLQ 73 (75)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 394
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.39 E-value=1.1e-06 Score=73.49 Aligned_cols=91 Identities=14% Similarity=0.125 Sum_probs=69.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC--------chhHHh----h----------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS--------EKSLMS----K---------------- 227 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~--------~~~l~~----~---------------- 227 (411)
..++++|.||++||++|....+.+.++.+.|.++ +.+..|+++. ...+.+ +
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4578999999999999999999999999999885 8888887651 122221 1
Q ss_pred ----------------Ccccccc---EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 228 ----------------FNVQGFP---TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 228 ----------------~~v~~~P---~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+++..+| +.+++..++.....+.|..+.+.|.+.|.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 2334566 888887767656677888899999999887754
No 395
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.34 E-value=2.2e-06 Score=73.03 Aligned_cols=43 Identities=12% Similarity=0.178 Sum_probs=38.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~ 219 (411)
..++++|.||++||++|+...|.+.+++++|.++ +.+..|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4579999999999999999999999999999875 888888875
No 396
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.34 E-value=2.9e-06 Score=70.43 Aligned_cols=88 Identities=9% Similarity=0.028 Sum_probs=62.7
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE------------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~------------------- 90 (411)
+...+.+.+. ...-++++++|.|| +.||+.|....+.+.++.+.+++ .+.++.|.++.
T Consensus 36 l~~~~G~~v~-l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~ 114 (179)
T 3ixr_A 36 LMLSGSTCKT-LSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVS 114 (179)
T ss_dssp EEEGGGEEEC-GGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEE
T ss_pred EECCCCCEEe-HHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEE
Confidence 4445555554 22335778888888 99999999999999999999876 47787777753
Q ss_pred --cHhHHHhcCCCc------------ccEEEEEeC-CCCCcccCC
Q 015217 91 --HQSLAQEYGIRG------------FPTIKVFVP-GKPPVDYQG 120 (411)
Q Consensus 91 --~~~~~~~~~i~~------------~P~~~~~~~-g~~~~~~~g 120 (411)
+.++++.|++.. .|+.++++. |+....+.+
T Consensus 115 D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G~I~~~~~~ 159 (179)
T 3ixr_A 115 DSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTHRIVEAWRQ 159 (179)
T ss_dssp CTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTSBEEEEECS
T ss_pred CCchHHHHHcCCcccccccCcccCCcceEEEEECCCCEEEEEEcC
Confidence 226778888864 588888864 554445544
No 397
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.30 E-value=4.9e-07 Score=64.24 Aligned_cols=68 Identities=13% Similarity=0.171 Sum_probs=48.2
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHH---hcCCCcccEEEEEeCCCCCcccCCCCCcchhH
Q 015217 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQ---EYGIRGFPTIKVFVPGKPPVDYQGARDVKPIA 128 (411)
Q Consensus 52 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~---~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~ 128 (411)
++.|+++||++|+...+.+++. .+.+..+|+++++++.+ ++|+.++|+++ .+|+.+ +..+.+.+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~~----~g~~~~~l~ 70 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLSW----SGFRPDMIN 70 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEEE----ESCCHHHHG
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEEE----ecCCHHHHH
Confidence 6789999999999999988763 36677889987765443 58999999983 355421 223444454
Q ss_pred HHH
Q 015217 129 EFA 131 (411)
Q Consensus 129 ~~~ 131 (411)
+++
T Consensus 71 ~~l 73 (81)
T 1h75_A 71 RLH 73 (81)
T ss_dssp GGS
T ss_pred HHH
Confidence 444
No 398
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.29 E-value=9.7e-06 Score=64.67 Aligned_cols=111 Identities=17% Similarity=0.233 Sum_probs=80.0
Q ss_pred CCCCcEEeCccchHHHHhcCCCeEE-EEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC--CCchhHHhhCcccc--
Q 015217 158 DSNESIELNSSNFDELVLKSKDLWI-VEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC--DSEKSLMSKFNVQG-- 232 (411)
Q Consensus 158 ~~~~v~~l~~~~~~~~~~~~~~~~l-v~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~--~~~~~l~~~~~v~~-- 232 (411)
.-+.|.+++.++..... ....+.. ++|.......-..+.+.+.++|+.|++++.|+.+|. +......+.||+..
T Consensus 12 ~~PLV~e~t~en~~~~~-~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~ 90 (147)
T 3bj5_A 12 QLPLVIEFTEQTAPKIF-GGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEE 90 (147)
T ss_dssp ---CEEECCTTTHHHHH-SSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGG
T ss_pred cCCeeEEeccccHHHHh-cCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCccc
Confidence 45789999999988864 4444443 345533333346688999999999999999999998 44446888999985
Q ss_pred ccEEEEEcC-CCCCccccc-CCCCHHHHHHHHHHHhhhc
Q 015217 233 FPTILVFGA-DKDSPIPYE-GARTAGAIESFALEQLETN 269 (411)
Q Consensus 233 ~P~i~~~~~-~~~~~~~y~-g~~~~~~i~~fi~~~~~~~ 269 (411)
+|+++++.. +....+.+. +.++.+.|.+|+...+...
T Consensus 91 ~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~Gk 129 (147)
T 3bj5_A 91 CPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGK 129 (147)
T ss_dssp CSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTC
T ss_pred CCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCC
Confidence 899999864 322234443 7889999999999988643
No 399
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=98.29 E-value=5e-06 Score=69.85 Aligned_cols=42 Identities=29% Similarity=0.534 Sum_probs=36.9
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA 88 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~ 88 (411)
.+++++|.|+.+||++|+.++|.+.++.+.+.+++.|..++.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~ 64 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHV 64 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 468899999999999999999999999998887777766654
No 400
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.28 E-value=3.4e-06 Score=70.07 Aligned_cols=90 Identities=11% Similarity=0.099 Sum_probs=65.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC-------c----hhHHhh-Cccc------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E----KSLMSK-FNVQ------------ 231 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~----~~l~~~-~~v~------------ 231 (411)
..++++|.||++||++|+...+.+.++.+.|.++ +.+..|+++. . ...+++ +++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4579999999999999999999999999999885 8888888653 2 134444 4322
Q ss_pred --------------cccE----EEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 232 --------------GFPT----ILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 232 --------------~~P~----i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
..|+ .+++..++.....|.|..+.+.+.+.|.+.+
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 169 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAALV 169 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 1465 6677666655667778777777666665554
No 401
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.28 E-value=1.4e-06 Score=72.68 Aligned_cols=87 Identities=11% Similarity=0.083 Sum_probs=63.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC-------c-h---hHHhhC----------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E-K---SLMSKF---------------- 228 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~-~---~l~~~~---------------- 228 (411)
..++++|.||++||++|+...+.+.++.+.+.++ +.+..|+++. . . ..++++
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4579999999999999999999999999999874 8999898752 1 1 122222
Q ss_pred ---------------c-----cccccEEEEEcCCCCCcccccCCCCHHHHHHHHH
Q 015217 229 ---------------N-----VQGFPTILVFGADKDSPIPYEGARTAGAIESFAL 263 (411)
Q Consensus 229 ---------------~-----v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~ 263 (411)
+ +..+|+++++..++.....+.|..+.++|.+.|.
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 180 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLP 180 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHH
Confidence 2 2224888888766655666778777777766554
No 402
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.26 E-value=2.7e-06 Score=71.78 Aligned_cols=89 Identities=9% Similarity=0.113 Sum_probs=69.7
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~ 226 (411)
..++++|.|| ++||++|....+.+.++++.|.+ .+.+..|+++. +..+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578999999 99999999999999999999976 48888888764 235788
Q ss_pred hCccc------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 227 KFNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.|++. .+|+++++..++.....+.|. .+.+++.+.+...
T Consensus 113 ~~gv~~~~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYGVLKTDEGIAYRGLFIIDGKGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCccCCCCceeeEEEEECCCCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 89998 799999997666444444453 3567888777654
No 403
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.26 E-value=2.5e-06 Score=71.22 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=63.3
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC-------c----hhHHhhCccc-------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS-------E----KSLMSKFNVQ------------- 231 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~-------~----~~l~~~~~v~------------- 231 (411)
..++++|.||++||++|+...+.+.++.+++.++ +.+..|+++. . ...++++++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 3579999999999999999999999999999874 8999888752 1 2233444332
Q ss_pred -----------------------cccEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 232 -----------------------GFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 232 -----------------------~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
..|+.+++..++.....+.|..+.++|.+.|.+
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 136777776666555666777677666666554
No 404
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.26 E-value=1.8e-06 Score=74.22 Aligned_cols=88 Identities=9% Similarity=0.154 Sum_probs=64.0
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~ 96 (411)
+++++||.|| ++||++|....|.+.++.+.+++ .+.++.|.++. ...+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 6789999999 99999999999999999988863 57777776642 124677
Q ss_pred hcCC-----CcccEEEEEeC-CCCCcccCCC----CCcchhHHHHHHH
Q 015217 97 EYGI-----RGFPTIKVFVP-GKPPVDYQGA----RDVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i-----~~~P~~~~~~~-g~~~~~~~g~----~~~~~l~~~~~~~ 134 (411)
.||+ ...|+.++++. |+....+.|. .+.+++.+.+.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7888 36899988864 5444444443 3455666666554
No 405
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=98.25 E-value=2e-07 Score=71.20 Aligned_cols=60 Identities=20% Similarity=0.212 Sum_probs=45.1
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH-------hHHHhcCCCcccEEEEEeCCCC
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ-------SLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~-------~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
..++.|+++||++|+++.+.+.+..... ++ +..+|++.++ .+.+.+|+.++|++++ +|+.
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i--~g~~ 85 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF--GKTS 85 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE--TTEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE--CCEE
Confidence 4577899999999999999887644221 22 7778887663 7888999999999743 5654
No 406
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.24 E-value=3.1e-06 Score=69.61 Aligned_cols=103 Identities=13% Similarity=0.027 Sum_probs=68.1
Q ss_pred CcEEeCccchhHHHhcCCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhC---CCeEEEEEeccc----------------
Q 015217 31 PVVQLTPNNFKSKVLNANGVVLVEFYAPWCG-HCQALTPIWEKAATVLK---GVATVAALDANE---------------- 90 (411)
Q Consensus 31 ~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~-~C~~~~~~~~~~~~~~~---~~i~~~~vd~~~---------------- 90 (411)
.+...+++.+. ...-++++++|.||++||+ .|....+.+.++.+.+. .++.++.|.++.
T Consensus 12 ~l~d~~G~~v~-l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~ 90 (170)
T 3me7_A 12 TLVDSYGNEFQ-LKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGI 90 (170)
T ss_dssp EEEETTCCEEE-GGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTC
T ss_pred EEEcCCcCEEc-hHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCC
Confidence 34445555444 2222589999999999997 69999999999999985 357777776541
Q ss_pred ---------------cHhHHHhcCC---------CcccEEEEEeC-CCCCcccCCC-CCcchhHHHHHHH
Q 015217 91 ---------------HQSLAQEYGI---------RGFPTIKVFVP-GKPPVDYQGA-RDVKPIAEFALQQ 134 (411)
Q Consensus 91 ---------------~~~~~~~~~i---------~~~P~~~~~~~-g~~~~~~~g~-~~~~~l~~~~~~~ 134 (411)
..+++++||+ .+.|++++++. |+....|.|. .+.+++.+.+.+.
T Consensus 91 ~~~~w~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 91 DGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp CSSSEEEEEESSHHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCHHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHh
Confidence 1245666553 45577878864 5444455664 4566666666654
No 407
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.24 E-value=3.6e-06 Score=70.35 Aligned_cols=88 Identities=11% Similarity=-0.006 Sum_probs=63.1
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhCC-CeEEEEEecccc-------------------------HhHHHhcC
Q 015217 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANEH-------------------------QSLAQEYG 99 (411)
Q Consensus 47 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~-------------------------~~~~~~~~ 99 (411)
++++++|.||+ +||+.|....|.+.++.+.+++ .+.++.|.++.. ..+++.||
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~yg 108 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFD 108 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTT
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhC
Confidence 57899999995 9999999999999999988864 577777766521 14566677
Q ss_pred CC------cccEEEEEe-CCCCCcccCCCC----CcchhHHHHHHH
Q 015217 100 IR------GFPTIKVFV-PGKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 100 i~------~~P~~~~~~-~g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
+. ..|+.+++. +|+....+.|.. +.+++.+.+.+.
T Consensus 109 v~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 109 NMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp CEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 76 369988886 455455555543 355566666544
No 408
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.23 E-value=6.7e-07 Score=72.56 Aligned_cols=57 Identities=16% Similarity=0.234 Sum_probs=36.3
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecc
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDAN 89 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~ 89 (411)
+...+.+.+. ...-++++++|.|| ++||++|....|.+.++.+.+++ .+.++.|+.+
T Consensus 15 l~~~~G~~~~-l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d 73 (157)
T 4g2e_A 15 LPDTELKKVK-LSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD 73 (157)
T ss_dssp EEBTTSCEEE-GGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS
T ss_pred eECCCCCEEe-HHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc
Confidence 3344444444 22236789999998 99999999999999988888765 5777777765
No 409
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.22 E-value=4.4e-06 Score=69.51 Aligned_cols=86 Identities=21% Similarity=0.358 Sum_probs=64.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc--c----------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--E---------------------------------- 90 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~--~---------------------------------- 90 (411)
.+++++|.|+...|++|+++++.+.++.+.+.+++.+..+... .
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~~~~~~~~~~~~ 99 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNHVSFMGGNMGQAMSKAYATMIALEVEDKMVPVMFNRIHTL 99 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEECSSSSGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEecCCCCCchHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999998876555443221 0
Q ss_pred ---------------------------------------cHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHH
Q 015217 91 ---------------------------------------HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFA 131 (411)
Q Consensus 91 ---------------------------------------~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~ 131 (411)
+.+.++++||+++|++++ +|+.++...+..+.+.+.+.+
T Consensus 100 ~~~~~~~~~l~~~a~~~Gld~~~~~~~~~s~~~~~~v~~~~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i 177 (184)
T 4dvc_A 100 RKPPKDEQELRQIFLDEGIDAAKFDAAYNGFAVDSMVHRFDKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLV 177 (184)
T ss_dssp CCCCSSHHHHHHHHHTTTCCHHHHHHHHTSHHHHHHHHHHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHH
T ss_pred hhccchHHHHHHHHHHhCCCHHHHHHHHhCHHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHH
Confidence 015678899999999776 777555556667777777666
Q ss_pred HHH
Q 015217 132 LQQ 134 (411)
Q Consensus 132 ~~~ 134 (411)
..+
T Consensus 178 ~~L 180 (184)
T 4dvc_A 178 NYL 180 (184)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 410
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.22 E-value=2.8e-06 Score=72.06 Aligned_cols=89 Identities=9% Similarity=0.163 Sum_probs=69.6
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHhh
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMSK 227 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~~ 227 (411)
.++++|.|| ++||+.|....+.+.++++.|.+ .+.+..|+++. +..+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578999999 99999999999999999999976 48888888764 3457888
Q ss_pred Cccc------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHh
Q 015217 228 FNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (411)
Q Consensus 228 ~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (411)
|++. .+|+++++..++.....+.|. .+.+++.+.+....
T Consensus 116 ygv~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~ell~~l~~l~ 164 (202)
T 1uul_A 116 YGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQ 164 (202)
T ss_dssp HTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred cCCccCCCCceeeEEEEECCCCEEEEEEeCCCCCCCCHHHHHHHHHHhh
Confidence 9998 899999997666444444443 34577877776543
No 411
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.19 E-value=2.9e-06 Score=72.75 Aligned_cols=82 Identities=17% Similarity=0.262 Sum_probs=60.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC--------------------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-------------------------------------- 218 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-------------------------------------- 218 (411)
..++.++.|+++||++|+.+.+.+.++++. .+.+..+..
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~---~v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL---GITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 356899999999999999999999988763 344443321
Q ss_pred ------CCchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 219 ------DSEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 219 ------~~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
+.+..+++++||.++|+++ +.++ ..+.|..+.+.|.+++.+..
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gtPt~v-~~dG----~~~~G~~~~~~l~~~l~~~~ 210 (216)
T 1eej_A 162 SCDVDIADHYALGVQLGVSGTPAVV-LSNG----TLVPGYQPPKEMKEFLDEHQ 210 (216)
T ss_dssp CCSCCHHHHHHHHHHHTCCSSSEEE-CTTS----CEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCccCEEE-EcCC----eEecCCCCHHHHHHHHHHhh
Confidence 1234578899999999985 4433 24678888899999887654
No 412
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.19 E-value=1.6e-06 Score=65.08 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=44.0
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc-------HhHHHhcCCCcccEEEEEeCCCC
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH-------QSLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~-------~~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
.++.|+++||++|+++.+.+.+....+++ +..+|++.+ ..+.+.+|+.++|+++ .+|+.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~--~~g~~ 78 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPRVF--IGKEC 78 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEE--ETTEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEE--ECCEE
Confidence 36779999999999999999886654432 455666654 3578889999999973 35653
No 413
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.18 E-value=5.5e-06 Score=68.39 Aligned_cols=83 Identities=19% Similarity=0.287 Sum_probs=64.3
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-------------------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------------------------- 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------------------------- 219 (411)
+.++.++.|++.|||+|+.+.+.+.++.+.+.. +.+...+..
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~~ 99 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKAN 99 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCC
Confidence 356889999999999999999999999998765 555554421
Q ss_pred --------------------------------CchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 220 --------------------------------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 220 --------------------------------~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
.+..+++++||.++|++++ ++ ..+.|..+.+.+.+.|.+.+
T Consensus 100 ~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~~i---~g---~~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 100 ETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLGFNGTPSFVV---ED---ALVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHTCCSSSEEEE---TT---EEECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCccCCEEEE---CC---EEeeCCCCHHHHHHHHHHHH
Confidence 1234667899999999987 22 25678889999999887765
No 414
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.18 E-value=4e-06 Score=70.40 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=68.3
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~ 226 (411)
..++++|.|| ++||++|....+.+.++++.|.+ .+.+..|+.+. +..+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 3578999999 99999999999999999999974 58888887763 235788
Q ss_pred hCccc-----cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 227 KFNVQ-----GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.||+. .+|+++++..++.....+.|. .+.+++.+.+...
T Consensus 110 ~~gv~~~~g~~~P~~~liD~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYDVLFNESVALRAFVLIDKQGVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTTCEETTTEECCEEEEECTTSBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhCCcCcCCceeeEEEEEcCCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 89998 899999997666444444453 2466777766554
No 415
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.18 E-value=5.2e-06 Score=70.96 Aligned_cols=89 Identities=17% Similarity=0.188 Sum_probs=68.1
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~ 226 (411)
..++++|.|| ++||+.|....+.+.+++++|.+ .+.+..|+.+. +..+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 3568999999 99999999999999999999974 58888887654 345788
Q ss_pred hCccc-----cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 227 KFNVQ-----GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 227 ~~~v~-----~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.||+. .+|+++++..++.....+.|. .+.+++.+.+...
T Consensus 131 ~ygv~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhCCccccCCcccEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 89998 899999997666444444443 3467777777654
No 416
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.17 E-value=6e-06 Score=69.82 Aligned_cols=91 Identities=14% Similarity=0.130 Sum_probs=67.2
Q ss_pred CCCeEEEEEeCCCChh-hhhhhHHHHHHHHHhc----CCeEEEEEeCCC----------------------------chh
Q 015217 177 SKDLWIVEFFAPWCGH-CKKLAPEWKKAANNLK----GKVKLGHVDCDS----------------------------EKS 223 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~-c~~~~~~~~~~a~~~~----~~~~f~~v~~~~----------------------------~~~ 223 (411)
..++++|.||++||++ |....+.+.++.+.+. ..+.+..|+++. ...
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3578999999999998 9999999999877775 368888888763 124
Q ss_pred HHhhCccc-ccc---------------EEEEEcCCCCCcccccCCCCHHHHHHHHHHHhh
Q 015217 224 LMSKFNVQ-GFP---------------TILVFGADKDSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 224 l~~~~~v~-~~P---------------~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
+++.||+. ..| +++++..++.....+.|..+.+.+.+.|.+.+.
T Consensus 120 ~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 67788876 333 678877666656667787787888888877664
No 417
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.16 E-value=4.7e-06 Score=71.61 Aligned_cols=89 Identities=10% Similarity=0.149 Sum_probs=69.5
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC----------------------------chhHHhh
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS----------------------------EKSLMSK 227 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~----------------------------~~~l~~~ 227 (411)
.++++|.|| ++||+.|+...+.+.+++++|.. .+.+..|+++. +..+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 478999999 99999999999999999999975 58888887753 3468888
Q ss_pred Cccc------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHHh
Q 015217 228 FNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQL 266 (411)
Q Consensus 228 ~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~~ 266 (411)
|++. .+|+++++..++.....+.|. .+.+++.+.+....
T Consensus 136 ygv~~~~~g~~~P~~~liD~~G~I~~~~~g~~~~~~~~~ell~~l~~l~ 184 (220)
T 1zye_A 136 YGVLLEGPGLALRGLFIIDPNGVIKHLSVNDLPVGRSVEETLRLVKAFQ 184 (220)
T ss_dssp TTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred hCCeecCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHhh
Confidence 9998 899999997666434434443 45678887776543
No 418
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.16 E-value=2.8e-06 Score=69.93 Aligned_cols=42 Identities=10% Similarity=0.064 Sum_probs=36.3
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDAN 89 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~ 89 (411)
++++++|.|| +.||++|....+.+.++.+.+ .++.++.|.++
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d 88 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMD 88 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESS
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCC
Confidence 5789999999 899999999999999999888 66777777664
No 419
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.15 E-value=5.8e-06 Score=70.53 Aligned_cols=80 Identities=16% Similarity=0.227 Sum_probs=59.6
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-------------------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD------------------------------------- 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~------------------------------------- 219 (411)
+.++.++.|+++||++|+.+.+.+.++.+. .+.+..+...
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~---~v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL---GITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT---TEEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC---CcEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 356899999999999999999999987653 2444332211
Q ss_pred -------CchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHH
Q 015217 220 -------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALE 264 (411)
Q Consensus 220 -------~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~ 264 (411)
.+..+++++||+++|++++ .+|. .+.|..+.+.|.+++.+
T Consensus 162 ~~~~~v~~~~~l~~~~gV~gTPt~vi-~nG~----~~~G~~~~~~l~~~l~~ 208 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFGVRGTPSIVT-STGE----LIGGYLKPADLLRALEE 208 (211)
T ss_dssp CCSSHHHHHHHHHHHHTCCSSCEEEC-TTSC----CCCSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcCCEEEE-eCCE----EecCCCCHHHHHHHHHh
Confidence 2345778899999999988 4432 46788889999988865
No 420
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.14 E-value=6.6e-06 Score=70.20 Aligned_cols=88 Identities=10% Similarity=0.144 Sum_probs=63.9
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecccc----------------------------HhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANEH----------------------------QSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~----------------------------~~~~~ 96 (411)
++++++|.|| ++||++|....|.+.++.+.+++ .+.++.|.++.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 5789999999 99999999999999999998864 577777766421 24677
Q ss_pred hcCCC------cccEEEEEeC-CCCCcccCCCC----CcchhHHHHHHH
Q 015217 97 EYGIR------GFPTIKVFVP-GKPPVDYQGAR----DVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~~-g~~~~~~~g~~----~~~~l~~~~~~~ 134 (411)
.||+. ..|+.++++. |+....+.|.. +.+++.+.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 78884 6899988864 54444444433 445566665544
No 421
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.14 E-value=1.2e-05 Score=65.71 Aligned_cols=88 Identities=15% Similarity=0.157 Sum_probs=66.5
Q ss_pred CCCeEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC-----------------------chhHHhhCcccc
Q 015217 177 SKDLWIVEFFAPW-CGHCKKLAPEWKKAANNLKGKVKLGHVDCDS-----------------------EKSLMSKFNVQG 232 (411)
Q Consensus 177 ~~~~~lv~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~-----------------------~~~l~~~~~v~~ 232 (411)
..++++|.||++| |++|+...+.+.++.+.+ ..+.+..|+.+. +..+++.|++..
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~ 121 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYI 121 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBB
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCcc
Confidence 3568999999999 999999999999999999 678888887663 235777888876
Q ss_pred ------ccEEEEEcCCCCCcccccCC-----CCHHHHHHHHHHH
Q 015217 233 ------FPTILVFGADKDSPIPYEGA-----RTAGAIESFALEQ 265 (411)
Q Consensus 233 ------~P~i~~~~~~~~~~~~y~g~-----~~~~~i~~fi~~~ 265 (411)
.|+.+++..++.....+.|. .+.+++.+.+.+.
T Consensus 122 ~~~g~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 122 KELRLLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp TTTCSBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ccCCceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHHh
Confidence 49999997666545555442 2446777776654
No 422
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.13 E-value=9.1e-06 Score=68.36 Aligned_cols=91 Identities=21% Similarity=0.315 Sum_probs=67.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-------------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN------------------------------------- 89 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~------------------------------------- 89 (411)
.+++.++.|+.+||++|+.+++.+.++.+.+++++.+..+...
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~~~~~s~~aa~a~~aa~~~~~~~~~~~~lf~~~~~~~~ 100 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKI 100 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECCCSGGGHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccccCcccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999999988776666555431
Q ss_pred -------------------------------------ccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHH
Q 015217 90 -------------------------------------EHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFAL 132 (411)
Q Consensus 90 -------------------------------------~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~ 132 (411)
.+..+++++||.++|++++ +|+. ...|..+.+.+.+.+.
T Consensus 101 ~~~~~~~l~~~a~~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~gv~gtPt~vi--ng~~--~~~g~~~~~~l~~~i~ 176 (195)
T 2znm_A 101 RLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQKLTEQYRIDSTPTVIV--GGKY--RVIFNNGFDGGVHTIK 176 (195)
T ss_dssp CTTSHHHHHHHHHTCSSSCHHHHHHHHTSHHHHHHHHHHHHHHHHTTCCSSSEEEE--TTTE--EECCCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCeEEE--CCEE--EEcCCCCHHHHHHHHH
Confidence 0114567789999999654 5653 2456677888888888
Q ss_pred HHHHHHHHH
Q 015217 133 QQIKALLKE 141 (411)
Q Consensus 133 ~~~~~~~~~ 141 (411)
+.+.....+
T Consensus 177 ~~l~~~~~~ 185 (195)
T 2znm_A 177 ELVAKVREE 185 (195)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777655444
No 423
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.13 E-value=7e-06 Score=57.08 Aligned_cols=68 Identities=15% Similarity=0.215 Sum_probs=51.2
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHh---hCccccccEEEEEcCCCCCcccccCCCCHHHH
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMS---KFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~---~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (411)
+++|+++||++|+...+.+.++ .+.|..+|.+.++.+.+ ++++..+|++++ + +. ..+..+.+.+
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~-g~----~~~g~~~~~l 69 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--D-GE----HWSGFRPERI 69 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--T-TE----EEESCCHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--C-Ce----EEcCCCHHHH
Confidence 6789999999999999988864 36777888887766555 899999999874 2 32 1344677777
Q ss_pred HHHH
Q 015217 259 ESFA 262 (411)
Q Consensus 259 ~~fi 262 (411)
.+++
T Consensus 70 ~~~l 73 (75)
T 1r7h_A 70 KQLQ 73 (75)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 424
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.11 E-value=8.6e-06 Score=70.90 Aligned_cols=76 Identities=11% Similarity=0.187 Sum_probs=58.5
Q ss_pred CCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhCC-CeEEEEEecccc----------------------------HhHHH
Q 015217 47 ANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKG-VATVAALDANEH----------------------------QSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~----------------------------~~~~~ 96 (411)
++++++|.||+ .||+.|....+.+.++.+.+++ .+.++.|.++.. .++++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 67899999999 9999999999999999999975 577877776521 25678
Q ss_pred hcCCC------cccEEEEEeC-CCCCcccCCCC
Q 015217 97 EYGIR------GFPTIKVFVP-GKPPVDYQGAR 122 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~~-g~~~~~~~g~~ 122 (411)
.||+. ..|++++++. |+....+.+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~ 188 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDL 188 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECT
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCC
Confidence 88887 6899888864 54444444433
No 425
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.08 E-value=1.4e-05 Score=66.50 Aligned_cols=63 Identities=13% Similarity=0.154 Sum_probs=42.6
Q ss_pred CCCCCcEEe--Cc-cchhHHHhcCCC-eEEEEEECCCChhhhh-hhHHHHHHHHHhCC-CeE-EEEEecc
Q 015217 27 GSSSPVVQL--TP-NNFKSKVLNANG-VVLVEFYAPWCGHCQA-LTPIWEKAATVLKG-VAT-VAALDAN 89 (411)
Q Consensus 27 ~~~~~~~~l--~~-~~f~~~~~~~~~-~~~v~f~~~~C~~C~~-~~~~~~~~~~~~~~-~i~-~~~vd~~ 89 (411)
.++..+..+ ++ +.+.-.-.-+++ ++++.||+.||+.|.. ..|.+.++.+.+++ .+. ++.|+.+
T Consensus 32 aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 32 LPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp CCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 334444555 55 555522212456 4566667999999999 79999999998865 466 7777775
No 426
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.07 E-value=8.5e-06 Score=64.93 Aligned_cols=80 Identities=24% Similarity=0.400 Sum_probs=59.9
Q ss_pred cCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec-------------------------------------
Q 015217 46 NANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA------------------------------------- 88 (411)
Q Consensus 46 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~------------------------------------- 88 (411)
..++.+++.|+.++|++|+++.+.+.++ +++.+..++.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 3567899999999999999999988654 3344432211
Q ss_pred ---------cccHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcchhHHHHHHH
Q 015217 89 ---------NEHQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKPIAEFALQQ 134 (411)
Q Consensus 89 ---------~~~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~l~~~~~~~ 134 (411)
+++.++++++||+++|++++ .+|+ ...|..+.+.|.+++.+.
T Consensus 87 ~~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHH
Confidence 12347889999999999876 5564 467888999998888764
No 427
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.07 E-value=6.2e-06 Score=69.04 Aligned_cols=41 Identities=20% Similarity=0.414 Sum_probs=34.3
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEec
Q 015217 48 NGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDA 88 (411)
Q Consensus 48 ~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~ 88 (411)
.++++|.|+..||++|+.+.|.+ .++.+.+.+++.|..++.
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 57 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHV 57 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEEC
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEec
Confidence 46899999999999999999986 688887777777766655
No 428
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.06 E-value=9.6e-06 Score=66.38 Aligned_cols=43 Identities=14% Similarity=0.146 Sum_probs=35.7
Q ss_pred CCCeEEEEEE-CCCChhhhh-hhHHHHHHHHHhCC-Ce-EEEEEecc
Q 015217 47 ANGVVLVEFY-APWCGHCQA-LTPIWEKAATVLKG-VA-TVAALDAN 89 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~-~~~~~~~~~~~~~~-~i-~~~~vd~~ 89 (411)
++++++|.|| ++||+.|.. ..|.+.++.+.+++ .+ .++.|+.+
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 76 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN 76 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 5778888876 999999999 99999999888864 57 78877765
No 429
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.05 E-value=5.5e-06 Score=64.68 Aligned_cols=66 Identities=20% Similarity=0.329 Sum_probs=45.3
Q ss_pred cchhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc---H----hHHHhcCCCcccEEEEEe
Q 015217 38 NNFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH---Q----SLAQEYGIRGFPTIKVFV 110 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~---~----~~~~~~~i~~~P~~~~~~ 110 (411)
+.+. .+...++ ++.|+++||++|+++.+.+.++. +.+..+|++.. + .+.+.+++..+|+++ .
T Consensus 18 ~~~~-~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i 86 (130)
T 2cq9_A 18 NQIQ-ETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--V 86 (130)
T ss_dssp HHHH-HHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--E
T ss_pred HHHH-HHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--E
Confidence 3444 3344443 34499999999999999988763 33455666644 3 378889999999974 3
Q ss_pred CCCC
Q 015217 111 PGKP 114 (411)
Q Consensus 111 ~g~~ 114 (411)
+|+.
T Consensus 87 ~G~~ 90 (130)
T 2cq9_A 87 NGTF 90 (130)
T ss_dssp TTEE
T ss_pred CCEE
Confidence 6653
No 430
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.05 E-value=9.2e-06 Score=66.40 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=56.4
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccc--------------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANE-------------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~-------------------- 90 (411)
+..++.+.+. ...-++++++|.|| +.||++|....+.+.++.+. .++.++.|..+.
T Consensus 31 l~~~~G~~~~-l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~ 107 (166)
T 3p7x_A 31 VLDNDLNQVT-LADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLS 107 (166)
T ss_dssp EECTTSCEEE-GGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEE
T ss_pred EEcCCCCEEe-HHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEcc
Confidence 3344444444 22235788999999 78999999999999998877 446776666542
Q ss_pred ---cHhHHHhcCCCc------ccEEEEEeC-CCCCcc
Q 015217 91 ---HQSLAQEYGIRG------FPTIKVFVP-GKPPVD 117 (411)
Q Consensus 91 ---~~~~~~~~~i~~------~P~~~~~~~-g~~~~~ 117 (411)
+.++++.||+.. .|+.++++. |+....
T Consensus 108 D~~~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~ 144 (166)
T 3p7x_A 108 DHRDLSFGENYGVVMEELRLLARAVFVLDADNKVVYK 144 (166)
T ss_dssp CTTTCHHHHHHTCEETTTTEECCEEEEECTTCBEEEE
T ss_pred CCchhHHHHHhCCccccCCceeeEEEEECCCCeEEEE
Confidence 235666777765 799888864 543333
No 431
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.04 E-value=1.4e-05 Score=68.82 Aligned_cols=88 Identities=8% Similarity=0.141 Sum_probs=66.7
Q ss_pred CCCeEEEEEeC-CCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC----------------------------chhHHh
Q 015217 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS----------------------------EKSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~~-~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~----------------------------~~~l~~ 226 (411)
..++++|.||+ .||++|....+.+.++.+.|.++ +.+..|+++. +..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 45789999996 99999999999999999999874 8888888774 224677
Q ss_pred hCccc------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHH
Q 015217 227 KFNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALE 264 (411)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~ 264 (411)
.|++. .+|+.+++..++.....+.|. ...+++.+.+..
T Consensus 148 ~ygv~~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~~il~~l~~ 195 (222)
T 3ztl_A 148 AYGVFDEEDGNAFRGLFIIDPNGILRQITINDKPVGRSVDETLRLLDA 195 (222)
T ss_dssp HTTCBCTTTSSBCEEEEEECTTSEEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HcCCeecCCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 88988 889999997666444444443 234566655543
No 432
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.03 E-value=5.4e-06 Score=67.55 Aligned_cols=43 Identities=21% Similarity=0.234 Sum_probs=35.5
Q ss_pred CCCeEEEEEE-CCCChhhh-hhhHHHHHHHHHhCC-CeE-EEEEecc
Q 015217 47 ANGVVLVEFY-APWCGHCQ-ALTPIWEKAATVLKG-VAT-VAALDAN 89 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~-~~~~~~~~~~~~~~~-~i~-~~~vd~~ 89 (411)
++++++|.|| +.||++|. ...|.+.++.+.+++ ++. ++.|..+
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 6789999999 89999999 899999999988863 466 6666554
No 433
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.03 E-value=4e-05 Score=64.21 Aligned_cols=42 Identities=17% Similarity=0.251 Sum_probs=35.5
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEec
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDA 88 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~ 88 (411)
.+++.++.|+.++|++|..+++.+.++.+.+.+++.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 456799999999999999999999999998877777655543
No 434
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.02 E-value=1.2e-05 Score=66.12 Aligned_cols=90 Identities=17% Similarity=0.308 Sum_probs=65.7
Q ss_pred CCCeEEEEEeCCCCh-hhhhhhHHHHHHHHHhcCC---eEEEEEeCCC---ch----hHHhh------------------
Q 015217 177 SKDLWIVEFFAPWCG-HCKKLAPEWKKAANNLKGK---VKLGHVDCDS---EK----SLMSK------------------ 227 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~-~c~~~~~~~~~~a~~~~~~---~~f~~v~~~~---~~----~l~~~------------------ 227 (411)
..++++|.||++||+ +|....+.+.++.+.+..+ +.+..|+++. .. ..+++
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 357899999999999 9999999999999988753 8898888762 11 11222
Q ss_pred -------------------CccccccEEEEEcCCCCCcccccCCC--CHHHHHHHHHHHh
Q 015217 228 -------------------FNVQGFPTILVFGADKDSPIPYEGAR--TAGAIESFALEQL 266 (411)
Q Consensus 228 -------------------~~v~~~P~i~~~~~~~~~~~~y~g~~--~~~~i~~fi~~~~ 266 (411)
+++...|+++++..++.....+.|.. +.++|.+.|.+.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 23445788888877665555667765 4788888887654
No 435
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.01 E-value=2.1e-06 Score=70.13 Aligned_cols=103 Identities=14% Similarity=0.208 Sum_probs=65.4
Q ss_pred cEEeCccchhH-HHhcCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc------------------
Q 015217 32 VVQLTPNNFKS-KVLNANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE------------------ 90 (411)
Q Consensus 32 ~~~l~~~~f~~-~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~------------------ 90 (411)
+...+.+.+.- ....+++++++.|| ++||++|....+.+.++.+.+++ .+.++.|..+.
T Consensus 16 l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~fp~l 95 (164)
T 4gqc_A 16 LPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRLAFNLL 95 (164)
T ss_dssp EEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTCCSEEE
T ss_pred eECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCccccee
Confidence 33444444441 22347888888888 99999999999999888888875 47777777652
Q ss_pred ---cHhHHHhcCCC----------cccEEEEEeC-CCCCcccC-----CCCCcchhHHHHHHH
Q 015217 91 ---HQSLAQEYGIR----------GFPTIKVFVP-GKPPVDYQ-----GARDVKPIAEFALQQ 134 (411)
Q Consensus 91 ---~~~~~~~~~i~----------~~P~~~~~~~-g~~~~~~~-----g~~~~~~l~~~~~~~ 134 (411)
+.++++.||+. ..|+.++++. |+....+. +..+.+++++.+.+.
T Consensus 96 ~D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 96 SDYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp ECTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred ecCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 23677888874 3577777754 44322222 233455565555543
No 436
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=98.01 E-value=3.8e-06 Score=66.93 Aligned_cols=65 Identities=18% Similarity=0.324 Sum_probs=44.9
Q ss_pred chhHHHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc---H----hHHHhcCCCcccEEEEEeC
Q 015217 39 NFKSKVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH---Q----SLAQEYGIRGFPTIKVFVP 111 (411)
Q Consensus 39 ~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~---~----~~~~~~~i~~~P~~~~~~~ 111 (411)
.+. .+...+ . ++.|+++||++|+.+.+.+.++. +.+..+|++.. + .+++.+|+.++|+++ .+
T Consensus 41 ~~~-~~i~~~-~-Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i~ 109 (146)
T 2ht9_A 41 QIQ-ETISDN-C-VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VN 109 (146)
T ss_dssp HHH-HHHHHC-S-EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--ET
T ss_pred HHH-HHhcCC-C-EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--EC
Confidence 344 334444 3 34499999999999999998763 33455666644 3 378899999999974 36
Q ss_pred CCC
Q 015217 112 GKP 114 (411)
Q Consensus 112 g~~ 114 (411)
|+.
T Consensus 110 G~~ 112 (146)
T 2ht9_A 110 GTF 112 (146)
T ss_dssp TEE
T ss_pred CEE
Confidence 653
No 437
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.00 E-value=8.8e-06 Score=70.90 Aligned_cols=88 Identities=13% Similarity=0.103 Sum_probs=64.8
Q ss_pred CCC-eEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc---------------------------cHhHHHh
Q 015217 47 ANG-VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE---------------------------HQSLAQE 97 (411)
Q Consensus 47 ~~~-~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~---------------------------~~~~~~~ 97 (411)
+++ .+|+.|+++||+.|....+.+.++.+.+++ ++.++.|++|. ..++++.
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ 111 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARR 111 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHH
Confidence 456 466788999999999999999999998875 58888888753 2368889
Q ss_pred cCCC-------cccEEEEEeC-CCCCcccCCC----CCcchhHHHHHHH
Q 015217 98 YGIR-------GFPTIKVFVP-GKPPVDYQGA----RDVKPIAEFALQQ 134 (411)
Q Consensus 98 ~~i~-------~~P~~~~~~~-g~~~~~~~g~----~~~~~l~~~~~~~ 134 (411)
||+. .+|+++++.. |+....+.|. ++.+++.+.+...
T Consensus 112 ygv~~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 112 LGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp HTCCCTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hCCccccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 9987 8999888864 5443333343 3556666666543
No 438
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.00 E-value=9.9e-06 Score=67.52 Aligned_cols=30 Identities=20% Similarity=0.407 Sum_probs=28.3
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHh
Q 015217 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVL 77 (411)
Q Consensus 48 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~ 77 (411)
+++++|.|+..||++|+++.|.+.++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 678999999999999999999999999887
No 439
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=3.8e-05 Score=63.12 Aligned_cols=95 Identities=12% Similarity=0.058 Sum_probs=74.4
Q ss_pred hcCCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEeccccH---------------hHHH---hcCCCcc
Q 015217 45 LNANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEHQ---------------SLAQ---EYGIRGF 103 (411)
Q Consensus 45 ~~~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~~~~---------------~~~~---~~~i~~~ 103 (411)
..+.|+++|+++++||..|..+-... +.+.+.++.++.+...|.+... .++. .+++.++
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~ 131 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQF 131 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTC
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCC
Confidence 45688999999999999999988644 6677777778888898888654 3443 3899999
Q ss_pred cEEEEEeCC----CCCcccCCCCCcchhHHHHHHHHHHHH
Q 015217 104 PTIKVFVPG----KPPVDYQGARDVKPIAEFALQQIKALL 139 (411)
Q Consensus 104 P~~~~~~~g----~~~~~~~g~~~~~~l~~~~~~~~~~~~ 139 (411)
|++.++... +.+.+..|..+++.+...+.+.++..-
T Consensus 132 P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e~~~ 171 (178)
T 2ec4_A 132 PLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAMEIFT 171 (178)
T ss_dssp SEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHHHhh
Confidence 999999532 225678999999999998887776543
No 440
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.97 E-value=2.4e-06 Score=71.88 Aligned_cols=45 Identities=18% Similarity=0.383 Sum_probs=40.8
Q ss_pred CCCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEecccc
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALDANEH 91 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd~~~~ 91 (411)
.++++||.||+.||+||+.+.|.| +++.+.+++++.|..++.+.+
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~ 159 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFM 159 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcC
Confidence 467899999999999999999999 999999988899999998753
No 441
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.97 E-value=2e-05 Score=57.13 Aligned_cols=74 Identities=20% Similarity=0.388 Sum_probs=52.2
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhc-----CCCcccEEEEEeCCCCCcccCCCCCc
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEY-----GIRGFPTIKVFVPGKPPVDYQGARDV 124 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~-----~i~~~P~~~~~~~g~~~~~~~g~~~~ 124 (411)
..++.|+.+||++|++....|.+. .+.|-.+|++++++..+.+ |.+.+|+++ +.+|..+. ..+.
T Consensus 4 a~I~vYs~~~Cp~C~~aK~~L~~~------gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~l~----~~~~ 72 (92)
T 2lqo_A 4 AALTIYTTSWCGYCLRLKTALTAN------RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGSTLT----NPSA 72 (92)
T ss_dssp SCEEEEECTTCSSHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCEEE----SCCH
T ss_pred CcEEEEcCCCCHhHHHHHHHHHhc------CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEEEe----CCCH
Confidence 357889999999999999887652 4677788888776543332 788999964 45665332 2466
Q ss_pred chhHHHHHHH
Q 015217 125 KPIAEFALQQ 134 (411)
Q Consensus 125 ~~l~~~~~~~ 134 (411)
+++.+++.+.
T Consensus 73 ~el~~~L~el 82 (92)
T 2lqo_A 73 DEVKAKLVKI 82 (92)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6777777654
No 442
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.97 E-value=2.8e-05 Score=63.20 Aligned_cols=86 Identities=12% Similarity=0.161 Sum_probs=63.0
Q ss_pred CCeEEEEEeC-CCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC---------------------chhHHhhCcccc--
Q 015217 178 KDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS---------------------EKSLMSKFNVQG-- 232 (411)
Q Consensus 178 ~~~~lv~f~~-~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~---------------------~~~l~~~~~v~~-- 232 (411)
.++++|.||+ .||+.|....+.+.++.+.|.++ +.+..|+++. +..+++.||+..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 4588999997 99999999999999999999764 8888887663 234777888876
Q ss_pred ----------ccEEEEEcCCCCCcccccCCC---CHHHHHHHHH
Q 015217 233 ----------FPTILVFGADKDSPIPYEGAR---TAGAIESFAL 263 (411)
Q Consensus 233 ----------~P~i~~~~~~~~~~~~y~g~~---~~~~i~~fi~ 263 (411)
.|+.+++..++.....+.|.. ..+++.+.+.
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~~~~~~~il~~l~ 158 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALK 158 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCEEEEECSCCSTTHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeEEEEEcCCCcccCHHHHHHHHH
Confidence 899999977665444454322 2344554443
No 443
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.96 E-value=1.1e-05 Score=58.72 Aligned_cols=70 Identities=11% Similarity=0.185 Sum_probs=49.4
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc-----cc----HhHHHhcCCCcccEEEEEeCCCCCcccCCC
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN-----EH----QSLAQEYGIRGFPTIKVFVPGKPPVDYQGA 121 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~-----~~----~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~ 121 (411)
.++.|+++||++|++..+.+.+.. +.+-.+|++ .. +++.+.+++..+|++++ +|+. -+.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~g~~----i~G 80 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--GDKH----VLG 80 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--TTEE----EES
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--CCEE----EeC
Confidence 367899999999999998888753 233345555 23 56778899999999876 5532 233
Q ss_pred CCcchhHHHHH
Q 015217 122 RDVKPIAEFAL 132 (411)
Q Consensus 122 ~~~~~l~~~~~ 132 (411)
.+.+.+.+++.
T Consensus 81 ~~~~~l~~~l~ 91 (92)
T 3ic4_A 81 YNEEKLKELIR 91 (92)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHhc
Confidence 47777777653
No 444
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.96 E-value=3.9e-05 Score=63.19 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=34.1
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHh--CCCeEEEEEe
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVL--KGVATVAALD 87 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~--~~~i~~~~vd 87 (411)
..++.++.|+..+|++|+.+++.+.++.+.+ .+++.+...+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~ 68 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKL 68 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEe
Confidence 4678999999999999999999999988888 6666665443
No 445
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.94 E-value=1.4e-05 Score=65.00 Aligned_cols=70 Identities=9% Similarity=-0.003 Sum_probs=50.8
Q ss_pred EeCccchhHHHhcCCCeEEEEEEC-CCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc---HhHHHhcCCCcccE
Q 015217 34 QLTPNNFKSKVLNANGVVLVEFYA-PWCGHCQALTPIWEKAATVLKGVATVAALDANEH---QSLAQEYGIRGFPT 105 (411)
Q Consensus 34 ~l~~~~f~~~~~~~~~~~~v~f~~-~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~---~~~~~~~~i~~~P~ 105 (411)
..+.+.+. ...-++++++|.||+ .||++|....|.+.++.+.+ .++.++.|.++.. .++++++++..+|.
T Consensus 29 ~~~G~~v~-l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~ 102 (163)
T 1psq_A 29 TTDLSKKS-LADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIM 102 (163)
T ss_dssp CTTSCEEE-GGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEE
T ss_pred cCCCcEee-HHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEE
Confidence 33444444 222367899999995 99999999999999999888 6788888888743 34566777644553
No 446
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.93 E-value=2.1e-05 Score=64.83 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=56.2
Q ss_pred CCeEEEEEeCCC-ChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC----------------------chhHHhhCccccc-
Q 015217 178 KDLWIVEFFAPW-CGHCKKLAPEWKKAANNLKGKVKLGHVDCDS----------------------EKSLMSKFNVQGF- 233 (411)
Q Consensus 178 ~~~~lv~f~~~~-c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~----------------------~~~l~~~~~v~~~- 233 (411)
.++++|.||+.| |++|+...+.+.++.+. ..+.+..|+.+. +..+++.|++...
T Consensus 44 gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~ 121 (175)
T 1xvq_A 44 GKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIAD 121 (175)
T ss_dssp TSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCS
T ss_pred CCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccc
Confidence 568999999999 99999999999999988 568888887662 2457888998876
Q ss_pred --------cEEEEEcCCCCCccccc
Q 015217 234 --------PTILVFGADKDSPIPYE 250 (411)
Q Consensus 234 --------P~i~~~~~~~~~~~~y~ 250 (411)
|+.+++..++.....+.
T Consensus 122 ~~~~g~~~p~~~lid~~G~I~~~~~ 146 (175)
T 1xvq_A 122 GPMAGLLARAIVVIGADGNVAYTEL 146 (175)
T ss_dssp STTTTSBCSEEEEECTTSBEEEEEE
T ss_pred cccCCcccceEEEECCCCeEEEEEE
Confidence 89888876665444554
No 447
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.92 E-value=1.3e-05 Score=57.93 Aligned_cols=55 Identities=22% Similarity=0.406 Sum_probs=44.0
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecc--ccHhHHHhc-CCCcccEEEEEeCCC
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDAN--EHQSLAQEY-GIRGFPTIKVFVPGK 113 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~--~~~~~~~~~-~i~~~P~~~~~~~g~ 113 (411)
.++.|+++||++|++..+.+++.. +.+..+|++ ...++.+.+ ++.++|++++ +|+
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~--~g~ 64 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI--GDY 64 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE--TTE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE--CCE
Confidence 477899999999999999887752 567778887 556788889 9999999743 554
No 448
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.92 E-value=1.9e-05 Score=69.22 Aligned_cols=74 Identities=11% Similarity=0.181 Sum_probs=56.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEecccc----------------------------HhHHH
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANEH----------------------------QSLAQ 96 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~~----------------------------~~~~~ 96 (411)
++++++|.|| +.||+.|....+.+.++.+.+++ .+.++.|.++.. .++++
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 6789999999 99999999999999999999975 577877777521 25677
Q ss_pred hcCCC------cccEEEEEeC-CCCCcccCC
Q 015217 97 EYGIR------GFPTIKVFVP-GKPPVDYQG 120 (411)
Q Consensus 97 ~~~i~------~~P~~~~~~~-g~~~~~~~g 120 (411)
.||+. .+|++++++. |+....+.+
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I~~~~~~ 200 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGILRQITLN 200 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred HcCCccccCCCccceEEEECCCCeEEEEEec
Confidence 88885 5799888864 544344444
No 449
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.91 E-value=1.2e-05 Score=65.63 Aligned_cols=57 Identities=16% Similarity=0.200 Sum_probs=44.6
Q ss_pred CCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH---hHHHhcCCCccc
Q 015217 47 ANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ---SLAQEYGIRGFP 104 (411)
Q Consensus 47 ~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~---~~~~~~~i~~~P 104 (411)
++++++|.|| +.||++|....|.+.++.+.+ .++.++.|..+... ++++++++..+|
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~ 102 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAK 102 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEE
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceE
Confidence 5789999999 899999999999999999998 67888888887433 244455553344
No 450
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.91 E-value=7.5e-06 Score=62.71 Aligned_cols=58 Identities=26% Similarity=0.470 Sum_probs=43.8
Q ss_pred EEEEECCCChhhhhh-hHHHHHHHHHhCCCeEEEEEeccccH-------hHHHhcCCCcccEEEEEeCCCC
Q 015217 52 LVEFYAPWCGHCQAL-TPIWEKAATVLKGVATVAALDANEHQ-------SLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 52 ~v~f~~~~C~~C~~~-~~~~~~~~~~~~~~i~~~~vd~~~~~-------~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
++.|+++||++|+++ .+.+.+... ..+.+..+|++.++ ++.+.+|+..+|++ |.+|+.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~ 92 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKH 92 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEE
Confidence 666999999999998 777765431 23677788888653 58888999999996 446654
No 451
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.90 E-value=2.3e-05 Score=68.23 Aligned_cols=86 Identities=17% Similarity=0.301 Sum_probs=62.4
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC--------------------------------------
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-------------------------------------- 219 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-------------------------------------- 219 (411)
.+..++.|+++||++|+.+.+.+.++.+. +++.+..+...
T Consensus 97 ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~~ 174 (241)
T 1v58_A 97 APVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVP 174 (241)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCCC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCcc
Confidence 45789999999999999999999887765 45666554331
Q ss_pred ------------CchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 220 ------------SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 220 ------------~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
.+..+++++||.++|++++...++. .....|..+.+.|.+++.+..
T Consensus 175 ~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~-~~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 175 ANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENT-LQQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTE-EEEEESSCCHHHHHHHTTC--
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCC-EEEecCCCCHHHHHHHHHHHH
Confidence 1234667899999999999764332 345678888888888876543
No 452
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=97.88 E-value=2.4e-05 Score=55.28 Aligned_cols=69 Identities=10% Similarity=0.161 Sum_probs=49.7
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHh---hCccccccEEEEEcCCCCCcccccCCCCHHHH
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMS---KFNVQGFPTILVFGADKDSPIPYEGARTAGAI 258 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~---~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i 258 (411)
++.|+++||++|+...+.+.+. .+.|..+|++.++.+.+ ++|+..+|++++ ++. ..+..+.+.|
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~~--~g~-----~~~g~~~~~l 69 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQGFRQLPVVIA--GDL-----SWSGFRPDMI 69 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTTCCSSCEEEE--TTE-----EEESCCHHHH
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhCCCccCEEEE--CCE-----EEecCCHHHH
Confidence 6789999999999999988763 36777888887765544 589999999843 332 1234566666
Q ss_pred HHHHH
Q 015217 259 ESFAL 263 (411)
Q Consensus 259 ~~fi~ 263 (411)
.+++.
T Consensus 70 ~~~l~ 74 (81)
T 1h75_A 70 NRLHP 74 (81)
T ss_dssp GGGSC
T ss_pred HHHHh
Confidence 66553
No 453
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.87 E-value=2.8e-05 Score=57.35 Aligned_cols=60 Identities=12% Similarity=0.215 Sum_probs=45.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHhHHHhc-----CCCcccEEEEEeCCCC
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQSLAQEY-----GIRGFPTIKVFVPGKP 114 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~~~~~~-----~i~~~P~~~~~~~g~~ 114 (411)
+...-++.|+++||++|+++.+.|.+.. +.+..+|++.+++..+.+ |...+|+++ .+|+.
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~if--i~g~~ 77 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANGKRSLPQIF--IDDQH 77 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEE--ETTEE
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEE--ECCEE
Confidence 4566788899999999999999988753 456678888776544433 899999874 36643
No 454
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.87 E-value=3.2e-05 Score=64.76 Aligned_cols=42 Identities=21% Similarity=0.362 Sum_probs=37.0
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC 218 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~ 218 (411)
+.++.++.|++.||++|+.+.+.+.++.+.+..++.|..+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 457899999999999999999999999999988887776654
No 455
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.86 E-value=3.1e-05 Score=57.84 Aligned_cols=62 Identities=19% Similarity=0.317 Sum_probs=44.7
Q ss_pred HHhcCCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHh----HHHhcCCCcccEEEEEeCCC
Q 015217 43 KVLNANGVVLVEFYA-----PWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRGFPTIKVFVPGK 113 (411)
Q Consensus 43 ~~~~~~~~~~v~f~~-----~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~----~~~~~~i~~~P~~~~~~~g~ 113 (411)
.+...+ .++ .|+. +||++|+++.+.+.+.. +.+..+|++.++. +.+.+|..++|+++ .+|+
T Consensus 12 ~~i~~~-~vv-vf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v~--i~g~ 81 (105)
T 2yan_A 12 VLTNKA-SVM-LFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSNWPTYPQLY--VKGE 81 (105)
T ss_dssp HHHTSS-SEE-EEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--ETTE
T ss_pred HHhccC-CEE-EEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHCCCCCCeEE--ECCE
Confidence 334444 344 4777 99999999999987763 5677888887765 55568999999974 3665
Q ss_pred C
Q 015217 114 P 114 (411)
Q Consensus 114 ~ 114 (411)
.
T Consensus 82 ~ 82 (105)
T 2yan_A 82 L 82 (105)
T ss_dssp E
T ss_pred E
Confidence 3
No 456
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.84 E-value=1e-05 Score=60.47 Aligned_cols=55 Identities=20% Similarity=0.303 Sum_probs=41.5
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc-------hhHHhhCccccccEEEE
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE-------KSLMSKFNVQGFPTILV 238 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~-------~~l~~~~~v~~~P~i~~ 238 (411)
.++.|+++||++|+.+.+.+.+++..+.+ |..+|++.+ ..+.+.+|+.++|++++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~~---~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i~~ 74 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEGL---LEFVDITATSDTNEIQDYLQQLTGARTVPRVFI 74 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTTS---EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCCc---cEEEEccCCCCHHHHHHHHHHHhCCCCcCeEEE
Confidence 36779999999999999999887655432 444555544 35778899999999743
No 457
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=97.84 E-value=6.4e-05 Score=61.72 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=35.8
Q ss_pred eCccchhHHHhcCCCeEE-EEEECCCChhhh-hhhHHHHHHHHHhCC-CeEEEE-Eecc
Q 015217 35 LTPNNFKSKVLNANGVVL-VEFYAPWCGHCQ-ALTPIWEKAATVLKG-VATVAA-LDAN 89 (411)
Q Consensus 35 l~~~~f~~~~~~~~~~~~-v~f~~~~C~~C~-~~~~~~~~~~~~~~~-~i~~~~-vd~~ 89 (411)
.+.+.+.-.-.-++++++ +.||+.||+.|. ...|.+.++.+++++ .+.++. +..+
T Consensus 30 ~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D 88 (173)
T 3mng_A 30 EPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN 88 (173)
T ss_dssp STTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC
Confidence 444555522222566554 455599999999 588999999998865 355543 5554
No 458
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.81 E-value=5.7e-05 Score=63.19 Aligned_cols=40 Identities=15% Similarity=0.419 Sum_probs=33.0
Q ss_pred CCeEEEEEECCCChhhhhhhHHH---HHHHHHhCCCeEEEEEe
Q 015217 48 NGVVLVEFYAPWCGHCQALTPIW---EKAATVLKGVATVAALD 87 (411)
Q Consensus 48 ~~~~~v~f~~~~C~~C~~~~~~~---~~~~~~~~~~i~~~~vd 87 (411)
+++.+|.|+..+|++|++++|.+ .++.+.+.+++.+..++
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~ 63 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYH 63 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEE
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEe
Confidence 47899999999999999999986 68999887655555444
No 459
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=97.81 E-value=8.4e-05 Score=60.88 Aligned_cols=60 Identities=13% Similarity=0.140 Sum_probs=43.0
Q ss_pred CCCcEEeCccchhHHHhcCCCeEEEEEECCCCh-hhhhhhHHHHHHHHHhC---CCeEEEEEecc
Q 015217 29 SSPVVQLTPNNFKSKVLNANGVVLVEFYAPWCG-HCQALTPIWEKAATVLK---GVATVAALDAN 89 (411)
Q Consensus 29 ~~~~~~l~~~~f~~~~~~~~~~~~v~f~~~~C~-~C~~~~~~~~~~~~~~~---~~i~~~~vd~~ 89 (411)
+....+.+++.+. ...-++++++|.||.+||+ .|....+.+.++.+.++ .++.++.|.+|
T Consensus 14 dF~L~d~~G~~v~-l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 14 TFQFTNQDGKPFG-TKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp CCEEECTTSCEEE-HHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CcEEECCCCCEEe-HHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 3334455556555 3333689999999999997 69999998888877764 25777777654
No 460
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.81 E-value=0.00031 Score=61.01 Aligned_cols=44 Identities=18% Similarity=0.254 Sum_probs=36.4
Q ss_pred CCCeEEEEEe-CCCChhhh-hhhHHHHHHHHHhcC-Ce-EEEEEeCCC
Q 015217 177 SKDLWIVEFF-APWCGHCK-KLAPEWKKAANNLKG-KV-KLGHVDCDS 220 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~-~~~~~~~~~a~~~~~-~~-~f~~v~~~~ 220 (411)
..++++|.|| ++||++|. ...+.+.++++.|++ .+ .+..|+.+.
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~ 79 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVND 79 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCC
Confidence 3567888898 99999999 899999999998875 47 787777554
No 461
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.78 E-value=0.0001 Score=61.80 Aligned_cols=43 Identities=28% Similarity=0.432 Sum_probs=38.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~ 219 (411)
..++.++.|++.||++|+.+.+.+.++.+.+.+++.|..++..
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 4678999999999999999999999999999888888888764
No 462
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.77 E-value=0.00021 Score=60.77 Aligned_cols=42 Identities=19% Similarity=0.278 Sum_probs=36.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~ 219 (411)
..++++|.||++||++|+ ..+.+.++.++|.++ +.+..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 457999999999999999 788999999999764 888888875
No 463
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=97.75 E-value=2.8e-05 Score=65.61 Aligned_cols=70 Identities=13% Similarity=0.108 Sum_probs=49.1
Q ss_pred EEeCccchhHHHhcCCCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH---hHHHhcCCCccc
Q 015217 33 VQLTPNNFKSKVLNANGVVLVEFY-APWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ---SLAQEYGIRGFP 104 (411)
Q Consensus 33 ~~l~~~~f~~~~~~~~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~---~~~~~~~i~~~P 104 (411)
...+.+.+. ...-++++++|.|| +.||+.|....+.+.++.+.+ .++.++.|.++... ++++++++..+|
T Consensus 64 ~d~~G~~v~-L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~f~ 137 (200)
T 3zrd_A 64 VAKDLSDVA-LSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEGLSNVI 137 (200)
T ss_dssp ECTTSCEEE-GGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTTCTTEE
T ss_pred ECCCCCEEc-HHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcCCCCce
Confidence 334444444 22236789999999 679999999999999999998 56888888877433 234455553444
No 464
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.73 E-value=5.2e-05 Score=53.57 Aligned_cols=55 Identities=11% Similarity=0.225 Sum_probs=41.3
Q ss_pred EEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH----hHHHhcCCCcccEEEEEeCCCC
Q 015217 52 LVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 52 ~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~----~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
++.|+++||++|+++.+.+.+. .+.+..+|++.++ ++.+.+++.++|+++ .+|+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~ 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQH 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEE
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 6789999999999999888764 2456667776543 466788999999974 35643
No 465
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.71 E-value=5.7e-05 Score=54.82 Aligned_cols=55 Identities=20% Similarity=0.418 Sum_probs=41.6
Q ss_pred EEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccH----hHHHhcCCCcccEEEEEeCCC
Q 015217 51 VLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEHQ----SLAQEYGIRGFPTIKVFVPGK 113 (411)
Q Consensus 51 ~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~----~~~~~~~i~~~P~~~~~~~g~ 113 (411)
.++.|+++||++|++..+.+.+. .+.+..+|+++++ ++.+.+++.++|++ +.+|+
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~ 65 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSV 65 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTE
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCE
Confidence 47789999999999999888764 3566777887654 35558899999975 33564
No 466
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.70 E-value=8.3e-05 Score=55.27 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=47.3
Q ss_pred CCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc-----HhHH----HhcCCCcccEEEEEeCCCCCccc
Q 015217 48 NGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH-----QSLA----QEYGIRGFPTIKVFVPGKPPVDY 118 (411)
Q Consensus 48 ~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~-----~~~~----~~~~i~~~P~~~~~~~g~~~~~~ 118 (411)
++..++.|+++||++|++..+.+.+.. +.+-.+|++.. +++. +..+..++|++++ +|+ ++
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i--~~~---~~ 88 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTII--NDE---KA 88 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEE--TTT---EE
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEE--CCC---EE
Confidence 445677899999999999999988753 33444555531 2332 3468999999765 331 23
Q ss_pred CCCCCcchhHHHH
Q 015217 119 QGARDVKPIAEFA 131 (411)
Q Consensus 119 ~g~~~~~~l~~~~ 131 (411)
-|..+.+.|.+++
T Consensus 89 igg~~~~~l~~~L 101 (103)
T 3nzn_A 89 IVGFKEKEIRESL 101 (103)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEcCCHHHHHHHh
Confidence 3556666665543
No 467
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.70 E-value=0.00012 Score=59.15 Aligned_cols=75 Identities=11% Similarity=0.170 Sum_probs=53.0
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC---------------------chhHHhhCcccccc-
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS---------------------EKSLMSKFNVQGFP- 234 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~---------------------~~~l~~~~~v~~~P- 234 (411)
.++++|.|| +.||+.|....+.+.++.+.|.++-.+..|+++. +..+++.||+...|
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~ 114 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPL 114 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSS
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCccccc
Confidence 346788887 8999999999999999999997632666666543 33577788888878
Q ss_pred -----EEEEEcCCCCCcccccCCC
Q 015217 235 -----TILVFGADKDSPIPYEGAR 253 (411)
Q Consensus 235 -----~i~~~~~~~~~~~~y~g~~ 253 (411)
+.+++ .++.....+.|..
T Consensus 115 ~g~~~~~~li-~~G~i~~~~~g~~ 137 (159)
T 2a4v_A 115 SGSIRSHFIF-VDGKLKFKRVKIS 137 (159)
T ss_dssp SCBCCEEEEE-ETTEEEEEEESCC
T ss_pred CCccceEEEE-cCCEEEEEEccCC
Confidence 55555 4554344555543
No 468
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.69 E-value=3e-05 Score=63.65 Aligned_cols=57 Identities=16% Similarity=0.298 Sum_probs=44.9
Q ss_pred CeEEEEEECCCChhhhhh-hHHHHHHHHHhCC-CeE-EEEEeccc---cHhHHHhcCCC-cccE
Q 015217 49 GVVLVEFYAPWCGHCQAL-TPIWEKAATVLKG-VAT-VAALDANE---HQSLAQEYGIR-GFPT 105 (411)
Q Consensus 49 ~~~~v~f~~~~C~~C~~~-~~~~~~~~~~~~~-~i~-~~~vd~~~---~~~~~~~~~i~-~~P~ 105 (411)
+++++.||++||++|... .|.+.++.+.+++ .+. ++.|+.+. ...+++++++. .+|.
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~~~~~fp~ 108 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQAKDAIEF 108 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTTCTTTSEE
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhCCCCceEE
Confidence 578889999999999998 9999999888864 466 88887764 34577788873 6774
No 469
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=3.9e-05 Score=59.80 Aligned_cols=51 Identities=22% Similarity=0.305 Sum_probs=39.3
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc---h----hHHhhCccccccEEEE
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---K----SLMSKFNVQGFPTILV 238 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~----~l~~~~~v~~~P~i~~ 238 (411)
++.|+++||++|+.+.+.+.++. +.|..++++.+ + .+.+.+++..+|++++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~i 86 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 86 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEEE
T ss_pred EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEEE
Confidence 45599999999999999998763 34555666654 3 3778899999999853
No 470
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.68 E-value=0.00012 Score=62.77 Aligned_cols=89 Identities=13% Similarity=0.187 Sum_probs=62.3
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~l~~ 226 (411)
..++++|.|| ++||+.|....+.+.++.++|.+ .+.+..|+.+.. ..+++
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 3568999999 99999999999999999999864 577777776542 13555
Q ss_pred hCcc-----ccccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 227 KFNV-----QGFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 227 ~~~v-----~~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.||+ ...|+.+++..++.....+.|. .+.+++.+.+...
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 6666 2568888887655433333342 3566777666554
No 471
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.68 E-value=1.5e-05 Score=60.56 Aligned_cols=56 Identities=18% Similarity=0.156 Sum_probs=42.3
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCch-------hHHhhCccccccEEEE
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEK-------SLMSKFNVQGFPTILV 238 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~-------~l~~~~~v~~~P~i~~ 238 (411)
..++.|+++||++|+...+.+.++.... ++ |..+|++.++ .+.+.+|+.++|++++
T Consensus 19 ~~vv~f~~~~Cp~C~~~~~~L~~~~~~~-~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~i 81 (114)
T 2hze_A 19 NKVTIFVKYTCPFCRNALDILNKFSFKR-GA--YEIVDIKEFKPENELRDYFEQITGGKTVPRIFF 81 (114)
T ss_dssp TCEEEEECTTCHHHHHHHHHHTTSCBCT-TS--EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEEE
T ss_pred CCEEEEEeCCChhHHHHHHHHHHcCCCc-Cc--eEEEEccCCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 3578899999999999999887654331 12 6677776553 6888999999998754
No 472
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.65 E-value=0.0002 Score=51.80 Aligned_cols=75 Identities=13% Similarity=0.314 Sum_probs=53.9
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhC-----ccccccEEEEEcCCCCCcccccCCCCH
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKF-----NVQGFPTILVFGADKDSPIPYEGARTA 255 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~-----~v~~~P~i~~~~~~~~~~~~y~g~~~~ 255 (411)
.++.|.++|||+|......+.+ ..+.|-.+|.+.+++..+.+ |.+.+|+|++ .++. . -+..+.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~i-~Dg~--~---l~~~~~ 72 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVKF-ADGS--T---LTNPSA 72 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEEE-TTSC--E---EESCCH
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEEE-eCCE--E---EeCCCH
Confidence 4788999999999999988875 24777788888877654433 6778998876 3322 1 123577
Q ss_pred HHHHHHHHHHhh
Q 015217 256 GAIESFALEQLE 267 (411)
Q Consensus 256 ~~i~~fi~~~~~ 267 (411)
++|.+++.+..+
T Consensus 73 ~el~~~L~el~g 84 (92)
T 2lqo_A 73 DEVKAKLVKIAG 84 (92)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 888888877643
No 473
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.64 E-value=0.00026 Score=58.47 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=60.3
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCCC---------------------chhHHhhCcccc--
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCDS---------------------EKSLMSKFNVQG-- 232 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~~---------------------~~~l~~~~~v~~-- 232 (411)
.++++|.|| +.||+.|....+.+.++.+.|.++ +.+..|+++. +..+++.|++..
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~ 130 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEK 130 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEE
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccc
Confidence 457788887 999999999999999999999874 7888787664 234677777753
Q ss_pred ----------ccEEEEEcCCCCCcccccCC---CCHHHHHHHHH
Q 015217 233 ----------FPTILVFGADKDSPIPYEGA---RTAGAIESFAL 263 (411)
Q Consensus 233 ----------~P~i~~~~~~~~~~~~y~g~---~~~~~i~~fi~ 263 (411)
.|+.+++..++.....+.+. ...+++.+.+.
T Consensus 131 ~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~~~~~~~il~~l~ 174 (179)
T 3ixr_A 131 TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLK 174 (179)
T ss_dssp CCC--CEEEECCEEEEECTTSBEEEEECSCCSTTHHHHHHHHHH
T ss_pred cccCcccCCcceEEEEECCCCEEEEEEcCCCCCCCHHHHHHHHH
Confidence 58889987666434344332 23345555544
No 474
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.63 E-value=0.00017 Score=59.93 Aligned_cols=89 Identities=11% Similarity=0.011 Sum_probs=62.4
Q ss_pred CCeEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc-------------------------hhHHhhCcc
Q 015217 178 KDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE-------------------------KSLMSKFNV 230 (411)
Q Consensus 178 ~~~~lv~f~~-~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~-------------------------~~l~~~~~v 230 (411)
.++++|.||+ .||+.|....+.+.++.+.|.+ .+.+..|+.+.. ..+++.||+
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 5788999995 9999999999999999998875 477777776542 124455555
Q ss_pred c------cccEEEEEcCCCCCcccccCCC----CHHHHHHHHHHHh
Q 015217 231 Q------GFPTILVFGADKDSPIPYEGAR----TAGAIESFALEQL 266 (411)
Q Consensus 231 ~------~~P~i~~~~~~~~~~~~y~g~~----~~~~i~~fi~~~~ 266 (411)
. ..|+.+++..++.....+.|.. +.+++.+.+....
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l~ 155 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQ 155 (186)
T ss_dssp EETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHHH
Confidence 4 2588888876664444444433 4677777765543
No 475
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.63 E-value=7e-05 Score=65.17 Aligned_cols=86 Identities=10% Similarity=0.100 Sum_probs=64.8
Q ss_pred eEEEEEeCCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCC---------------------------chhHHhhCccc
Q 015217 180 LWIVEFFAPWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDS---------------------------EKSLMSKFNVQ 231 (411)
Q Consensus 180 ~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~---------------------------~~~l~~~~~v~ 231 (411)
.+++.|+++||+.|....+.+.+++..|.. .+.+..|+++. +..+++.||+.
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~ 115 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL 115 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCC
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCc
Confidence 456678899999999999999999999976 48888888764 23577888886
Q ss_pred -------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 232 -------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 232 -------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.+|+++++..++.....+.|. .+.++|.+.|...
T Consensus 116 ~~~~g~~~~p~~fIID~dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 116 HAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp CTTCSSSCCEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cccCCCcccceEEEECCCCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 789999997666433333343 3677887777554
No 476
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.61 E-value=7.7e-05 Score=56.49 Aligned_cols=62 Identities=19% Similarity=0.452 Sum_probs=42.3
Q ss_pred HHhcCCCeEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc----H----hHHHhcCCCcccEEEEEeCCCC
Q 015217 43 KVLNANGVVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH----Q----SLAQEYGIRGFPTIKVFVPGKP 114 (411)
Q Consensus 43 ~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~----~----~~~~~~~i~~~P~~~~~~~g~~ 114 (411)
.+..+++ ++.|+++||++|++..+.|.+.. +.+..+|++.. + .+.+..|...+|+++ .+|+.
T Consensus 14 ~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~if--i~g~~ 83 (113)
T 3rhb_A 14 KTVTENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVF--VCGKH 83 (113)
T ss_dssp HHHHHSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEEE--ETTEE
T ss_pred HHHhcCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEEE--ECCEE
Confidence 4444444 67799999999999999887642 33445666542 2 255567999999974 46653
No 477
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.59 E-value=0.00029 Score=57.61 Aligned_cols=90 Identities=10% Similarity=0.013 Sum_probs=66.1
Q ss_pred CCeEEEEEeCCCCh-hhhhhhHHHHHHHHHhc---CCeEEEEEeCCC---------------------------c----h
Q 015217 178 KDLWIVEFFAPWCG-HCKKLAPEWKKAANNLK---GKVKLGHVDCDS---------------------------E----K 222 (411)
Q Consensus 178 ~~~~lv~f~~~~c~-~c~~~~~~~~~~a~~~~---~~~~f~~v~~~~---------------------------~----~ 222 (411)
.++++|.||++||+ .|....+.+.++.+.+. ..+.+..|+++. + .
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 67899999999997 69999999999999996 357777776541 0 1
Q ss_pred hHHhhCc---------cccccEEEEEcCCCCCcccccCC-CCHHHHHHHHHHHhh
Q 015217 223 SLMSKFN---------VQGFPTILVFGADKDSPIPYEGA-RTAGAIESFALEQLE 267 (411)
Q Consensus 223 ~l~~~~~---------v~~~P~i~~~~~~~~~~~~y~g~-~~~~~i~~fi~~~~~ 267 (411)
.+++.|| +...|+++++..++.....|.|. .+.++|.+.|.+...
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~~ 162 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLARG 162 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHTT
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhhc
Confidence 3555544 33457888887766544456674 678899888887754
No 478
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.58 E-value=0.00047 Score=58.33 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=36.0
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCC-eEEEEEeCC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGK-VKLGHVDCD 219 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~-~~f~~v~~~ 219 (411)
..++++|.||++||++| ...+.+.++.++|.++ +.+..|+++
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 45799999999999999 5788999999999864 888888765
No 479
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.57 E-value=0.00024 Score=60.42 Aligned_cols=89 Identities=7% Similarity=0.105 Sum_probs=62.8
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHHh
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~l~~ 226 (411)
..++++|.|| ++||+.|....+.+.++.++|.. .+.+..|+++.. ..+++
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 126 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 126 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHH
Confidence 3568999999 99999999999999999999975 477777776532 23555
Q ss_pred hCccc------cccEEEEEcCCCCCcccccCC----CCHHHHHHHHHHH
Q 015217 227 KFNVQ------GFPTILVFGADKDSPIPYEGA----RTAGAIESFALEQ 265 (411)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g~----~~~~~i~~fi~~~ 265 (411)
.||+. ..|+.+++..++.....+.|. .+.+++.+.+...
T Consensus 127 ~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 127 DYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 66663 478888887666433333343 3556777666553
No 480
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.57 E-value=0.00013 Score=53.72 Aligned_cols=55 Identities=15% Similarity=0.244 Sum_probs=42.1
Q ss_pred CCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCchhHHhhC-----ccccccEEEE
Q 015217 178 KDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSEKSLMSKF-----NVQGFPTILV 238 (411)
Q Consensus 178 ~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~l~~~~-----~v~~~P~i~~ 238 (411)
....++.|+++||++|+...+.+.+.. +.|..+|.+.++...+.+ |...+|++++
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g~~~vP~ifi 73 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANGKRSLPQIFI 73 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTTCCCSCEEEE
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCCCCCCCEEEE
Confidence 345678899999999999999998763 556677887776554444 8889998854
No 481
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.56 E-value=8.8e-05 Score=53.77 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=49.8
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC-----Cc----hhHHhhCccccccEEEEEcCCCCCcccccC
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD-----SE----KSLMSKFNVQGFPTILVFGADKDSPIPYEG 251 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~-----~~----~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g 251 (411)
.+++|+++||++|+.....+.++. +.+..++.+ .. ..+.+.+++..+|++++ + +. .-|
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~--~-g~----~i~ 79 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK--G-DK----HVL 79 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE--T-TE----EEE
T ss_pred eEEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE--C-CE----EEe
Confidence 367899999999999999888764 333345544 22 55667889999999887 2 21 234
Q ss_pred CCCHHHHHHHHH
Q 015217 252 ARTAGAIESFAL 263 (411)
Q Consensus 252 ~~~~~~i~~fi~ 263 (411)
.++.+.|.+++.
T Consensus 80 G~~~~~l~~~l~ 91 (92)
T 3ic4_A 80 GYNEEKLKELIR 91 (92)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHhc
Confidence 568888888763
No 482
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.54 E-value=7.9e-05 Score=53.68 Aligned_cols=52 Identities=23% Similarity=0.454 Sum_probs=41.9
Q ss_pred EEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCC--CchhHHhhC-ccccccEEEE
Q 015217 181 WIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCD--SEKSLMSKF-NVQGFPTILV 238 (411)
Q Consensus 181 ~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~--~~~~l~~~~-~v~~~P~i~~ 238 (411)
.+++|+++||++|+...+.+.+.. +.|..+|.+ ....+.+.+ ++..+|++++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~~ 61 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDASTSLRQEMVQRANGRNTFPQIFI 61 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSCHHHHHHHHHHHHSSCCSCEEEE
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECCHHHHHHHHHHhCCCCCcCEEEE
Confidence 477899999999999999888753 567778877 455678888 9999999854
No 483
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.52 E-value=4.3e-05 Score=58.44 Aligned_cols=54 Identities=17% Similarity=0.240 Sum_probs=41.0
Q ss_pred EEEEeCCCChhhhhh-hHHHHHHHHHhcCCeEEEEEeCCCch-------hHHhhCccccccEEEE
Q 015217 182 IVEFFAPWCGHCKKL-APEWKKAANNLKGKVKLGHVDCDSEK-------SLMSKFNVQGFPTILV 238 (411)
Q Consensus 182 lv~f~~~~c~~c~~~-~~~~~~~a~~~~~~~~f~~v~~~~~~-------~l~~~~~v~~~P~i~~ 238 (411)
++.|+++||++|+.. .+.+.+... ..+.|..+|.+.++ .+.+.+|+.++|++++
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~vfi 88 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEINGQRTVPNIYI 88 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE
T ss_pred EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhCCCCcCEEEE
Confidence 667999999999999 887766441 23677777776543 5888899999998743
No 484
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=97.51 E-value=0.00013 Score=52.44 Aligned_cols=73 Identities=11% Similarity=0.063 Sum_probs=49.6
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCCCeEEEEEecccc----HhHHHhcCC-----CcccEEEEEeCCCCCcccCC
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKGVATVAALDANEH----QSLAQEYGI-----RGFPTIKVFVPGKPPVDYQG 120 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~----~~~~~~~~i-----~~~P~~~~~~~g~~~~~~~g 120 (411)
..++.|+++||++|++....+.+.. -.+.+..+|.+.+ .++.+.+|. ..+|++++ +|+.+.
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i~---- 73 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHIG---- 73 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEEE----
T ss_pred eEEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEEe----
Confidence 4588899999999999988776543 2356666666654 457778888 99999854 564321
Q ss_pred CCCcchhHHHHHHH
Q 015217 121 ARDVKPIAEFALQQ 134 (411)
Q Consensus 121 ~~~~~~l~~~~~~~ 134 (411)
..+++.+++.+.
T Consensus 74 --g~~~i~~~~~~~ 85 (89)
T 3msz_A 74 --GFTELKANADKI 85 (89)
T ss_dssp --SHHHHHHTHHHH
T ss_pred --ChHHHHHHHHHH
Confidence 344555555543
No 485
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.48 E-value=0.00027 Score=57.84 Aligned_cols=42 Identities=10% Similarity=0.098 Sum_probs=35.7
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS 220 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~ 220 (411)
.++++|.|| +.||+.|....+.+.++.+.+ ..+.+..|+.+.
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~ 89 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDL 89 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCC
Confidence 468889998 799999999999999999888 668888777654
No 486
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.45 E-value=9.3e-05 Score=59.73 Aligned_cols=87 Identities=13% Similarity=0.277 Sum_probs=51.8
Q ss_pred CCCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc---------------------hhHHhhCccc--
Q 015217 177 SKDLWIVEFF-APWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE---------------------KSLMSKFNVQ-- 231 (411)
Q Consensus 177 ~~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~---------------------~~l~~~~~v~-- 231 (411)
..+++++.|| +.||++|....+.+.++..++.. .+.+..|+.+.. ..+++.||+.
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~~~~p~l~D~~~~v~~~ygv~~~ 108 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNKLNFTILSDYNREVVKKYNVAWE 108 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCEEE
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcCCcEEEEEcCCcHHHHHcCCccc
Confidence 3567888888 99999999999999888888876 477777775542 2356667663
Q ss_pred ---------cccEEEEEcCCCCCcccc-----cCCCCHHHHHHHHH
Q 015217 232 ---------GFPTILVFGADKDSPIPY-----EGARTAGAIESFAL 263 (411)
Q Consensus 232 ---------~~P~i~~~~~~~~~~~~y-----~g~~~~~~i~~fi~ 263 (411)
..|+.+++..++.....+ .+..+.+++.+.+.
T Consensus 109 ~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~ 154 (157)
T 4g2e_A 109 FPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVK 154 (157)
T ss_dssp CTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHH
T ss_pred cccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHH
Confidence 246777776555322222 23345666666553
No 487
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.45 E-value=0.00049 Score=59.69 Aligned_cols=88 Identities=7% Similarity=0.143 Sum_probs=62.8
Q ss_pred CCCeEEEEEeC-CCChhhhhhhHHHHHHHHHhcC-CeEEEEEeCCCc----------------------------hhHHh
Q 015217 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKG-KVKLGHVDCDSE----------------------------KSLMS 226 (411)
Q Consensus 177 ~~~~~lv~f~~-~~c~~c~~~~~~~~~~a~~~~~-~~~f~~v~~~~~----------------------------~~l~~ 226 (411)
..++++|.||+ .||+.|....+.+.++.+.|++ .+.+..|+++.. ..+++
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35788999998 9999999999999999999986 478877776642 23566
Q ss_pred hCccc------cccEEEEEcCCCCCcccccC----CCCHHHHHHHHHH
Q 015217 227 KFNVQ------GFPTILVFGADKDSPIPYEG----ARTAGAIESFALE 264 (411)
Q Consensus 227 ~~~v~------~~P~i~~~~~~~~~~~~y~g----~~~~~~i~~fi~~ 264 (411)
.||+. .+|+.+++..++.....+.+ ..+.+++.+.+..
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 67776 57999998766643333333 2345666666543
No 488
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.45 E-value=0.00014 Score=57.74 Aligned_cols=51 Identities=22% Similarity=0.305 Sum_probs=38.5
Q ss_pred EEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCCc---h----hHHhhCccccccEEEE
Q 015217 182 IVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDSE---K----SLMSKFNVQGFPTILV 238 (411)
Q Consensus 182 lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~----~l~~~~~v~~~P~i~~ 238 (411)
++.|+++||++|+.+.+.+.++. +.|..++++.+ + .+++.+|+..+|++++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~ifi 108 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFV 108 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEEE
T ss_pred EEEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEEE
Confidence 45599999999999999998764 33445555543 3 3778899999999853
No 489
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.45 E-value=0.00066 Score=57.74 Aligned_cols=99 Identities=9% Similarity=0.011 Sum_probs=62.9
Q ss_pred cEEeCccchhHHHhcCCCeEEEEEECCC-Chhhh-----hhhHHHHHHHHHhCCCeEEEEEeccc---------------
Q 015217 32 VVQLTPNNFKSKVLNANGVVLVEFYAPW-CGHCQ-----ALTPIWEKAATVLKGVATVAALDANE--------------- 90 (411)
Q Consensus 32 ~~~l~~~~f~~~~~~~~~~~~v~f~~~~-C~~C~-----~~~~~~~~~~~~~~~~i~~~~vd~~~--------------- 90 (411)
+...+.+.+. ...-.+++++|.||+.| |+.|. ...+.+.+. +. .+.++.|.++.
T Consensus 33 L~d~~G~~vs-Lsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~-gv~VvgIS~Ds~~~~~~f~~~~gl~~ 107 (224)
T 3keb_A 33 LVDDQKHDAA-LESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WP-HLKLIVITVDSPSSLARARHEHGLPN 107 (224)
T ss_dssp EEETTSCEEE-GGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CT-TSEEEEEESSCHHHHHHHHHHHCCTT
T ss_pred EECCCCCEEe-HHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cC-CCEEEEEECCCHHHHHHHHHHcCCCC
Confidence 3444444444 22235789999999998 99999 777777766 43 45666665531
Q ss_pred --------cHhHHHhcCCCc---------ccEEEEEeC-CCCCcc-----cCCCCCcchhHHHHHHHH
Q 015217 91 --------HQSLAQEYGIRG---------FPTIKVFVP-GKPPVD-----YQGARDVKPIAEFALQQI 135 (411)
Q Consensus 91 --------~~~~~~~~~i~~---------~P~~~~~~~-g~~~~~-----~~g~~~~~~l~~~~~~~~ 135 (411)
+..+++.||+.. .|+.++++. |..... +.+..+.+.+.+.+....
T Consensus 108 fplLsD~~~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l~ 175 (224)
T 3keb_A 108 IALLSTLRGRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEGE 175 (224)
T ss_dssp CEEEESTTCTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHHH
T ss_pred ceEEEcCCchHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHhh
Confidence 246888898875 698888864 543222 223455666776665543
No 490
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.43 E-value=0.0025 Score=52.18 Aligned_cols=92 Identities=10% Similarity=0.115 Sum_probs=69.2
Q ss_pred cCCCeEEEEEeCCCChhhhhhhHHH---HHHHHHhcCCeEEEEEeCCCch---------------hHH---hhCcccccc
Q 015217 176 KSKDLWIVEFFAPWCGHCKKLAPEW---KKAANNLKGKVKLGHVDCDSEK---------------SLM---SKFNVQGFP 234 (411)
Q Consensus 176 ~~~~~~lv~f~~~~c~~c~~~~~~~---~~~a~~~~~~~~f~~v~~~~~~---------------~l~---~~~~v~~~P 234 (411)
+..+..+|+++++||..|..+-... .++.+.++.++.+...|.+... .++ +.+++.++|
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P 132 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFP 132 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCS
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCC
Confidence 3467999999999999999886543 6677777778888888877654 233 338999999
Q ss_pred EEEEEcCCC---CCcccccCCCCHHHHHHHHHHHhh
Q 015217 235 TILVFGADK---DSPIPYEGARTAGAIESFALEQLE 267 (411)
Q Consensus 235 ~i~~~~~~~---~~~~~y~g~~~~~~i~~fi~~~~~ 267 (411)
.+.++...+ +...+..|..+.+++.+.+...+.
T Consensus 133 ~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~~e 168 (178)
T 2ec4_A 133 LFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAAME 168 (178)
T ss_dssp EEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHHHH
Confidence 999995433 223457899999988887766553
No 491
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=97.40 E-value=0.00048 Score=55.78 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=35.5
Q ss_pred CCCeEEEEEeC-CCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC
Q 015217 177 SKDLWIVEFFA-PWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS 220 (411)
Q Consensus 177 ~~~~~lv~f~~-~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~ 220 (411)
..++++|.||+ .||+.|....+.+.++.+++ ..+.+..|+.+.
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~ 84 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDL 84 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCC
Confidence 35688999995 99999999999999999888 667777777553
No 492
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=97.39 E-value=0.00057 Score=58.89 Aligned_cols=87 Identities=13% Similarity=0.030 Sum_probs=59.1
Q ss_pred CCeEEEEEE-CCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-----------------------------cHhHHH
Q 015217 48 NGVVLVEFY-APWCGHCQALTPIWEKAATVLKG-VATVAALDANE-----------------------------HQSLAQ 96 (411)
Q Consensus 48 ~~~~~v~f~-~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-----------------------------~~~~~~ 96 (411)
++++++.|| ++||+.|....+.+.++.++++. ++.++.|.++. ..++++
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 348888888 89999999999999999988864 57777776652 124667
Q ss_pred hcCCC------------cccEEEEEeC-CCCCcccCCC----CCcchhHHHHHHH
Q 015217 97 EYGIR------------GFPTIKVFVP-GKPPVDYQGA----RDVKPIAEFALQQ 134 (411)
Q Consensus 97 ~~~i~------------~~P~~~~~~~-g~~~~~~~g~----~~~~~l~~~~~~~ 134 (411)
.||+. ..|++++++. |+....+.+. ++.+++.+.+...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 77774 4788888865 4433333332 3455566655543
No 493
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.39 E-value=0.002 Score=55.21 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=31.2
Q ss_pred CCCeEEEEEECCCChhhhhhhHHH-HHHHHHh--CCCeEEEEE
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIW-EKAATVL--KGVATVAAL 86 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~-~~~~~~~--~~~i~~~~v 86 (411)
..++.++.|....|++|+++.+.+ .++.+.+ .+++.+...
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~ 80 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFR 80 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEE
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 356789999999999999999964 7787777 456666444
No 494
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.39 E-value=0.00033 Score=59.88 Aligned_cols=85 Identities=13% Similarity=0.099 Sum_probs=58.7
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc----------------------------cHhHHHhcCC
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE----------------------------HQSLAQEYGI 100 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~----------------------------~~~~~~~~~i 100 (411)
.+|+.|+++||+.|....+.+.++.++++. ++.++.|.++. +.++++.||+
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 555666899999999999999999998875 57777777652 1256777887
Q ss_pred C------------cccEEEEEeC-CCCCcccCC----CCCcchhHHHHHHH
Q 015217 101 R------------GFPTIKVFVP-GKPPVDYQG----ARDVKPIAEFALQQ 134 (411)
Q Consensus 101 ~------------~~P~~~~~~~-g~~~~~~~g----~~~~~~l~~~~~~~ 134 (411)
. ..|+++++.. |+....+.+ .++.+++.+.+...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 3 3689888865 443333322 34556666666543
No 495
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=97.38 E-value=0.0011 Score=56.76 Aligned_cols=85 Identities=18% Similarity=0.155 Sum_probs=58.8
Q ss_pred eEEEEEECCCChhhhhhhHHHHHHHHHhCC-CeEEEEEeccc-------------------------------cHhHHHh
Q 015217 50 VVLVEFYAPWCGHCQALTPIWEKAATVLKG-VATVAALDANE-------------------------------HQSLAQE 97 (411)
Q Consensus 50 ~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~i~~~~vd~~~-------------------------------~~~~~~~ 97 (411)
.+|+.|+++||+.|....+.+.++.+++++ ++.++.|.++. +.++++.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~D~~~~va~~ 113 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIIDDRNRELAIL 113 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEECTTCHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceeecCchHHHHH
Confidence 566677899999999999999999998875 57777776652 1246677
Q ss_pred cCCC------------cccEEEEEeC-CCCCcccCCC----CCcchhHHHHHHH
Q 015217 98 YGIR------------GFPTIKVFVP-GKPPVDYQGA----RDVKPIAEFALQQ 134 (411)
Q Consensus 98 ~~i~------------~~P~~~~~~~-g~~~~~~~g~----~~~~~l~~~~~~~ 134 (411)
||+. ..|++++++. |+....+.+. ++.+++.+.+...
T Consensus 114 ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 114 LGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp TTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 7773 3689888865 4433343333 3456666666544
No 496
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.36 E-value=0.00057 Score=54.25 Aligned_cols=80 Identities=24% Similarity=0.372 Sum_probs=58.7
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC--------------------------------------
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC-------------------------------------- 218 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~-------------------------------------- 218 (411)
+.+..++.|+.++|++|+.+.+.+.++ +++.+.....
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~~ 87 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVG 87 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCCc
Confidence 456889999999999999999987654 3444443321
Q ss_pred ----C----CchhHHhhCccccccEEEEEcCCCCCcccccCCCCHHHHHHHHHHHh
Q 015217 219 ----D----SEKSLMSKFNVQGFPTILVFGADKDSPIPYEGARTAGAIESFALEQL 266 (411)
Q Consensus 219 ----~----~~~~l~~~~~v~~~P~i~~~~~~~~~~~~y~g~~~~~~i~~fi~~~~ 266 (411)
. .+..+++++||+++|++++ .++. ...|..+.+.+.+.|.+..
T Consensus 88 ~~~~~~~v~~~~~la~~~gI~gtPt~vi-~nG~----~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 88 GSICDNPVAETTSLGEQFGFNGTPTLVF-PNGR----TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp CCCCSCSHHHHHHHHHHTTCCSSCEEEC-TTSC----EEESCCCTTHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHHHHhCCCccCEEEE-ECCE----EeeCCCCHHHHHHHHHHHH
Confidence 0 1335778899999999998 4332 4678888999999987764
No 497
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.34 E-value=0.00046 Score=51.76 Aligned_cols=66 Identities=18% Similarity=0.331 Sum_probs=45.9
Q ss_pred cchhHHHhcCCCeEEEEEEC-----CCChhhhhhhHHHHHHHHHhCCCeEEEEEeccccHh----HHHhcCCCcccEEEE
Q 015217 38 NNFKSKVLNANGVVLVEFYA-----PWCGHCQALTPIWEKAATVLKGVATVAALDANEHQS----LAQEYGIRGFPTIKV 108 (411)
Q Consensus 38 ~~f~~~~~~~~~~~~v~f~~-----~~C~~C~~~~~~~~~~~~~~~~~i~~~~vd~~~~~~----~~~~~~i~~~P~~~~ 108 (411)
+.++ .++.+++ ++.|+. +||++|++..+.|.+. .+.+..+|++.+++ +.+..|...+|++
T Consensus 6 ~~~~-~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i-- 74 (109)
T 1wik_A 6 SGLK-VLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSNWPTYPQL-- 74 (109)
T ss_dssp CCHH-HHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--
T ss_pred HHHH-HHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--
Confidence 3455 4444444 445777 9999999999888764 36788888887654 4556788999985
Q ss_pred EeCCCC
Q 015217 109 FVPGKP 114 (411)
Q Consensus 109 ~~~g~~ 114 (411)
|.+|+.
T Consensus 75 fi~g~~ 80 (109)
T 1wik_A 75 YVRGDL 80 (109)
T ss_dssp ECSSSE
T ss_pred EECCEE
Confidence 446653
No 498
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.34 E-value=0.0012 Score=55.54 Aligned_cols=85 Identities=25% Similarity=0.285 Sum_probs=62.0
Q ss_pred CCCeEEEEEECCCChhhhhhhHHH-HHHHHHh--CCCeEEEEEeccc---------------------------------
Q 015217 47 ANGVVLVEFYAPWCGHCQALTPIW-EKAATVL--KGVATVAALDANE--------------------------------- 90 (411)
Q Consensus 47 ~~~~~~v~f~~~~C~~C~~~~~~~-~~~~~~~--~~~i~~~~vd~~~--------------------------------- 90 (411)
..++.+|.|....|++|+++.+.+ ..+.+.+ .+++.|...+.--
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p~~~~~s~~Aa~aa~a~~~~~~~~f~~~~~aLf~~ 107 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVMFHGKGSRLAALASEEVWKEDPDSFWDFHEKLFEK 107 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECCCSHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecCccchhHHHHHHHHHHHHhhCHHHHHHHHHHHHHh
Confidence 467899999999999999999987 5555566 3567775554310
Q ss_pred --------------------------------------------cHhHHHhcCCCcccEEEEEeCCCCCcccCCCCCcch
Q 015217 91 --------------------------------------------HQSLAQEYGIRGFPTIKVFVPGKPPVDYQGARDVKP 126 (411)
Q Consensus 91 --------------------------------------------~~~~~~~~~i~~~P~~~~~~~g~~~~~~~g~~~~~~ 126 (411)
+...++++||.++|++++ +|+. +.|..+.+.
T Consensus 108 ~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~~~~v~~~~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~ 182 (202)
T 3gha_A 108 QPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETFASQVEKDSDLNQKMNIQATPTIYV--NDKV---IKNFADYDE 182 (202)
T ss_dssp CCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTTHHHHHHHHHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHH
T ss_pred CccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHH
Confidence 004566789999999877 5642 668888888
Q ss_pred hHHHHHHHHH
Q 015217 127 IAEFALQQIK 136 (411)
Q Consensus 127 l~~~~~~~~~ 136 (411)
+.+.+.+.+.
T Consensus 183 l~~~i~~~~~ 192 (202)
T 3gha_A 183 IKETIEKELK 192 (202)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888876654
No 499
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.31 E-value=0.00061 Score=55.28 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=35.5
Q ss_pred CCeEEEEEe-CCCChhhhhhhHHHHHHHHHhcCCeEEEEEeCCC
Q 015217 178 KDLWIVEFF-APWCGHCKKLAPEWKKAANNLKGKVKLGHVDCDS 220 (411)
Q Consensus 178 ~~~~lv~f~-~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~~~ 220 (411)
.++++|.|| +.||+.|....+.+.++.+.+ ..+.+..|+.+.
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~ 85 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADL 85 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 468899998 799999999999999999998 667777777554
No 500
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.29 E-value=0.0014 Score=54.78 Aligned_cols=42 Identities=26% Similarity=0.483 Sum_probs=35.9
Q ss_pred CCCeEEEEEeCCCChhhhhhhHHHHHHHHHhcCCeEEEEEeC
Q 015217 177 SKDLWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVDC 218 (411)
Q Consensus 177 ~~~~~lv~f~~~~c~~c~~~~~~~~~~a~~~~~~~~f~~v~~ 218 (411)
+.++.++.|++.||++|..+.+.+.++.+.+..++.|..+..
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 62 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHV 62 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEEC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEecc
Confidence 356889999999999999999999999999887777766553
Done!