Query 015220
Match_columns 411
No_of_seqs 47 out of 49
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 08:47:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015220.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015220hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 99.9 6E-21 2E-25 181.4 30.1 268 94-404 107-409 (410)
2 2ynn_A Coatomer subunit beta'; 99.9 2.2E-20 7.4E-25 169.4 29.0 185 204-410 66-263 (304)
3 3ow8_A WD repeat-containing pr 99.9 8.4E-20 2.9E-24 168.5 33.3 260 106-404 49-319 (321)
4 1vyh_C Platelet-activating fac 99.9 1.3E-21 4.6E-26 185.9 21.7 235 134-410 106-373 (410)
5 3frx_A Guanine nucleotide-bind 99.9 7.4E-21 2.5E-25 174.1 24.9 188 198-410 23-231 (319)
6 1got_B GT-beta; complex (GTP-b 99.9 1.9E-19 6.4E-24 165.8 33.5 271 95-403 55-340 (340)
7 3ow8_A WD repeat-containing pr 99.9 3.7E-21 1.3E-25 177.6 22.0 187 199-410 87-283 (321)
8 4gqb_B Methylosome protein 50; 99.9 9.6E-21 3.3E-25 178.5 23.0 189 198-410 88-293 (344)
9 1sq9_A Antiviral protein SKI8; 99.9 8.8E-20 3E-24 166.0 27.7 281 95-408 16-397 (397)
10 2ynn_A Coatomer subunit beta'; 99.9 3.2E-20 1.1E-24 168.3 23.8 189 198-410 19-221 (304)
11 1got_B GT-beta; complex (GTP-b 99.9 3.6E-20 1.2E-24 170.5 24.4 191 198-410 61-261 (340)
12 3iz6_a 40S ribosomal protein R 99.9 1.4E-19 4.8E-24 169.5 26.9 282 95-410 66-379 (380)
13 2xzm_R RACK1; ribosome, transl 99.9 1.3E-19 4.5E-24 166.5 25.8 185 201-407 35-245 (343)
14 4aow_A Guanine nucleotide-bind 99.9 4E-18 1.4E-22 151.0 33.4 276 97-408 40-339 (340)
15 4ery_A WD repeat-containing pr 99.9 2E-19 6.7E-24 160.9 24.7 189 198-410 29-227 (312)
16 3odt_A Protein DOA1; ubiquitin 99.9 3.6E-18 1.2E-22 149.0 32.0 269 96-410 19-300 (313)
17 3gre_A Serine/threonine-protei 99.9 1.1E-18 3.9E-23 162.7 30.7 262 120-410 48-363 (437)
18 3frx_A Guanine nucleotide-bind 99.9 2.5E-19 8.4E-24 164.0 25.1 189 199-408 72-319 (319)
19 3k26_A Polycomb protein EED; W 99.9 1.6E-19 5.5E-24 160.4 23.1 280 95-406 18-366 (366)
20 2pbi_B Guanine nucleotide-bind 99.9 2.2E-18 7.5E-23 160.7 31.8 263 106-403 77-354 (354)
21 3dm0_A Maltose-binding peripla 99.8 1.4E-19 4.8E-24 182.3 25.2 197 193-410 380-596 (694)
22 3v7d_B Cell division control p 99.8 1.9E-18 6.4E-23 162.4 31.2 261 105-410 132-425 (464)
23 1erj_A Transcriptional repress 99.8 1.7E-18 5.7E-23 162.9 30.7 260 112-407 82-390 (393)
24 2ymu_A WD-40 repeat protein; u 99.8 1.9E-18 6.5E-23 166.0 31.4 267 95-410 262-542 (577)
25 3iz6_a 40S ribosomal protein R 99.8 3.9E-20 1.3E-24 173.3 18.8 190 203-410 76-284 (380)
26 4gqb_B Methylosome protein 50; 99.8 4E-19 1.4E-23 167.5 25.6 184 203-409 137-334 (344)
27 2ymu_A WD-40 repeat protein; u 99.8 1.2E-18 4E-23 167.4 29.2 260 96-403 304-577 (577)
28 3f3f_A Nucleoporin SEH1; struc 99.8 7.3E-19 2.5E-23 152.7 25.1 190 198-409 17-340 (351)
29 4h5i_A Guanine nucleotide-exch 99.8 1.4E-19 4.9E-24 170.2 21.7 189 198-407 139-344 (365)
30 4aez_A CDC20, WD repeat-contai 99.8 4.3E-18 1.5E-22 159.2 31.0 260 106-410 104-384 (401)
31 2ovr_B FBW7, F-BOX/WD repeat p 99.8 2.8E-18 9.7E-23 161.7 29.9 262 105-410 129-395 (445)
32 4g56_B MGC81050 protein; prote 99.8 4.5E-19 1.5E-23 166.0 23.8 245 135-410 41-305 (357)
33 4a11_B DNA excision repair pro 99.8 9.2E-19 3.2E-23 157.8 24.9 285 94-410 42-369 (408)
34 3i2n_A WD repeat-containing pr 99.8 1.4E-18 4.8E-23 154.3 25.8 277 96-410 19-357 (357)
35 4ery_A WD repeat-containing pr 99.8 1.7E-17 5.8E-22 148.4 32.6 269 97-405 25-311 (312)
36 1nr0_A Actin interacting prote 99.8 4.9E-18 1.7E-22 169.8 31.6 272 105-410 71-359 (611)
37 3dwl_C Actin-related protein 2 99.8 4.8E-20 1.7E-24 167.6 15.4 192 198-409 17-239 (377)
38 1k8k_C P40, ARP2/3 complex 41 99.8 2.3E-18 7.9E-23 154.3 25.9 194 197-410 13-237 (372)
39 1nr0_A Actin interacting prote 99.8 4.1E-19 1.4E-23 177.6 23.3 189 198-410 65-274 (611)
40 2ovr_B FBW7, F-BOX/WD repeat p 99.8 9.8E-18 3.4E-22 158.1 31.3 275 94-406 158-442 (445)
41 1gxr_A ESG1, transducin-like e 99.8 1.2E-17 4.1E-22 146.7 29.2 238 134-410 49-300 (337)
42 3v7d_B Cell division control p 99.8 9.2E-19 3.1E-23 164.5 23.3 185 205-410 132-345 (464)
43 1erj_A Transcriptional repress 99.8 9.8E-19 3.3E-23 164.5 23.4 190 198-410 129-345 (393)
44 2pbi_B Guanine nucleotide-bind 99.8 8.9E-19 3E-23 163.4 22.5 188 198-410 70-275 (354)
45 2hes_X YDR267CP; beta-propelle 99.8 3.6E-17 1.2E-21 150.4 32.8 278 97-407 16-329 (330)
46 4g56_B MGC81050 protein; prote 99.8 3.5E-19 1.2E-23 166.7 19.3 185 198-406 145-343 (357)
47 1p22_A F-BOX/WD-repeat protein 99.8 4.7E-18 1.6E-22 160.7 27.2 266 97-409 135-417 (435)
48 3fm0_A Protein CIAO1; WDR39,SG 99.8 2.5E-18 8.6E-23 159.0 24.7 188 197-406 21-225 (345)
49 3k26_A Polycomb protein EED; W 99.8 1.2E-18 4.2E-23 154.7 21.5 250 130-409 12-321 (366)
50 2pm7_B Protein transport prote 99.8 1.1E-18 3.7E-23 157.8 21.6 187 198-407 15-239 (297)
51 4aow_A Guanine nucleotide-bind 99.8 4.8E-18 1.6E-22 150.4 25.2 190 198-410 44-250 (340)
52 1r5m_A SIR4-interacting protei 99.8 7.5E-18 2.6E-22 152.2 26.9 269 96-408 46-363 (425)
53 1gxr_A ESG1, transducin-like e 99.8 3.3E-17 1.1E-21 143.9 30.2 256 106-405 64-336 (337)
54 3ei3_B DNA damage-binding prot 99.8 5.6E-18 1.9E-22 155.3 26.2 273 97-406 75-382 (383)
55 3zwl_B Eukaryotic translation 99.8 3.6E-17 1.2E-21 145.0 29.8 274 94-409 31-349 (369)
56 3gre_A Serine/threonine-protei 99.8 3.6E-18 1.2E-22 159.3 24.3 287 95-403 63-437 (437)
57 1p22_A F-BOX/WD-repeat protein 99.8 1.9E-18 6.6E-23 163.3 22.8 183 204-410 142-329 (435)
58 4ggc_A P55CDC, cell division c 99.8 1.5E-17 5.2E-22 145.8 26.7 257 112-407 42-316 (318)
59 1pgu_A Actin interacting prote 99.8 8.6E-18 3E-22 160.7 26.9 277 97-410 208-577 (615)
60 3bg1_A Protein SEC13 homolog; 99.8 1.1E-18 3.7E-23 159.5 19.8 187 198-406 19-247 (316)
61 2pm9_A Protein WEB1, protein t 99.8 1.8E-18 6.2E-23 157.8 20.7 266 112-409 42-340 (416)
62 2pm9_A Protein WEB1, protein t 99.8 3.6E-18 1.2E-22 155.9 22.5 287 94-408 66-416 (416)
63 1r5m_A SIR4-interacting protei 99.8 2.1E-17 7.1E-22 149.3 27.1 275 95-405 108-424 (425)
64 3vl1_A 26S proteasome regulato 99.8 9.6E-18 3.3E-22 154.2 24.8 189 200-409 104-325 (420)
65 3vu4_A KMHSV2; beta-propeller 99.8 2E-17 6.7E-22 154.4 26.9 188 195-408 61-273 (355)
66 3ei3_B DNA damage-binding prot 99.8 1.4E-17 4.8E-22 152.6 24.7 190 197-410 123-343 (383)
67 2hes_X YDR267CP; beta-propelle 99.8 1.9E-17 6.5E-22 152.2 24.7 180 207-407 26-231 (330)
68 1k8k_C P40, ARP2/3 complex 41 99.8 1.9E-16 6.3E-21 142.0 30.2 273 97-410 10-365 (372)
69 4gga_A P55CDC, cell division c 99.8 9.9E-17 3.4E-21 151.3 29.2 260 110-408 120-397 (420)
70 3jrp_A Fusion protein of prote 99.8 2.6E-17 8.9E-22 146.9 23.5 188 198-408 17-242 (379)
71 3zwl_B Eukaryotic translation 99.8 2.4E-17 8.2E-22 146.1 22.9 195 193-410 30-253 (369)
72 3vl1_A 26S proteasome regulato 99.8 2.6E-17 8.8E-22 151.4 23.1 263 105-407 68-366 (420)
73 1l0q_A Surface layer protein; 99.8 3.6E-16 1.2E-20 142.8 30.4 262 107-410 4-279 (391)
74 3i2n_A WD repeat-containing pr 99.8 3.2E-17 1.1E-21 145.6 22.7 253 125-408 7-293 (357)
75 1pgu_A Actin interacting prote 99.8 1.2E-16 4E-21 152.9 27.0 275 97-407 300-615 (615)
76 2xzm_R RACK1; ribosome, transl 99.8 1.6E-16 5.6E-21 145.9 26.8 186 198-408 82-342 (343)
77 1sq9_A Antiviral protein SKI8; 99.8 1.9E-16 6.6E-21 144.0 26.8 192 198-410 68-326 (397)
78 2pm7_B Protein transport prote 99.8 3.4E-16 1.2E-20 141.5 27.5 238 134-405 7-284 (297)
79 3lrv_A PRE-mRNA-splicing facto 99.8 1.8E-17 6.2E-22 151.8 19.4 184 203-410 46-248 (343)
80 3mmy_A MRNA export factor; mRN 99.8 3.1E-16 1.1E-20 138.9 26.3 196 197-410 91-308 (368)
81 3fm0_A Protein CIAO1; WDR39,SG 99.8 2.3E-15 8E-20 139.1 33.3 268 106-409 29-338 (345)
82 3vu4_A KMHSV2; beta-propeller 99.8 2.4E-17 8.2E-22 153.8 19.9 186 197-410 24-231 (355)
83 4aez_A CDC20, WD repeat-contai 99.8 9.8E-17 3.4E-21 150.1 24.1 186 198-410 99-297 (401)
84 3dm0_A Maltose-binding peripla 99.8 2.8E-16 9.7E-21 158.4 28.8 243 133-410 379-636 (694)
85 3bg1_A Protein SEC13 homolog; 99.8 1.8E-16 6.1E-21 144.9 24.7 242 131-405 8-292 (316)
86 4e54_B DNA damage-binding prot 99.8 1.4E-16 4.8E-21 151.4 24.0 207 197-410 169-391 (435)
87 1yfq_A Cell cycle arrest prote 99.8 3E-16 1E-20 139.5 23.6 247 133-410 8-286 (342)
88 3dw8_B Serine/threonine-protei 99.8 1E-15 3.4E-20 141.5 27.9 197 197-410 98-377 (447)
89 3sfz_A APAF-1, apoptotic pepti 99.7 9.6E-17 3.3E-21 169.7 23.4 270 105-410 852-1162(1249)
90 2aq5_A Coronin-1A; WD40 repeat 99.7 5.7E-17 2E-21 150.8 19.2 224 158-409 7-257 (402)
91 3dw8_B Serine/threonine-protei 99.7 3E-16 1E-20 145.0 23.7 199 197-410 33-320 (447)
92 3odt_A Protein DOA1; ubiquitin 99.7 1.9E-16 6.7E-21 138.1 21.0 183 198-410 24-218 (313)
93 3jrp_A Fusion protein of prote 99.7 1.4E-15 4.8E-20 135.7 27.0 240 134-407 9-288 (379)
94 4a11_B DNA excision repair pro 99.7 1.1E-16 3.7E-21 144.4 19.9 188 198-410 49-280 (408)
95 2w18_A PALB2, fancn, partner a 99.7 1.1E-16 3.7E-21 159.2 21.6 181 204-404 144-355 (356)
96 4e54_B DNA damage-binding prot 99.7 4.9E-17 1.7E-21 154.5 18.0 190 198-410 125-331 (435)
97 3mmy_A MRNA export factor; mRN 99.7 9.4E-16 3.2E-20 135.8 24.9 266 95-388 39-338 (368)
98 2aq5_A Coronin-1A; WD40 repeat 99.7 2.5E-16 8.6E-21 146.5 21.5 190 197-408 86-301 (402)
99 2oaj_A Protein SNI1; WD40 repe 99.7 1.9E-16 6.4E-21 168.8 23.4 194 198-410 23-246 (902)
100 3mkq_A Coatomer beta'-subunit; 99.7 9.8E-16 3.4E-20 153.3 27.1 184 204-410 66-263 (814)
101 3mkq_A Coatomer beta'-subunit; 99.7 4.6E-16 1.6E-20 155.7 24.0 189 198-410 19-221 (814)
102 2vdu_B TRNA (guanine-N(7)-)-me 99.7 3.7E-16 1.3E-20 148.7 22.0 192 197-410 9-275 (450)
103 3sfz_A APAF-1, apoptotic pepti 99.7 4.1E-16 1.4E-20 165.0 24.2 192 199-410 622-875 (1249)
104 2vdu_B TRNA (guanine-N(7)-)-me 99.7 1.4E-15 4.8E-20 144.7 22.9 193 198-407 108-342 (450)
105 4h5i_A Guanine nucleotide-exch 99.7 9E-16 3.1E-20 144.4 19.9 186 204-410 93-304 (365)
106 3dwl_C Actin-related protein 2 99.7 2.3E-16 7.9E-21 143.4 15.2 174 198-387 61-273 (377)
107 3bws_A Protein LP49; two-domai 99.7 2.6E-14 9E-19 132.3 29.1 262 106-405 135-431 (433)
108 3lrv_A PRE-mRNA-splicing facto 99.7 4.3E-15 1.5E-19 136.1 22.3 177 208-407 88-293 (343)
109 1yfq_A Cell cycle arrest prote 99.7 8.8E-15 3E-19 130.0 23.3 255 97-388 13-315 (342)
110 2j04_B YDR362CP, TAU91; beta p 99.7 4.8E-16 1.6E-20 157.2 16.7 190 202-410 170-390 (524)
111 1l0q_A Surface layer protein; 99.7 2E-14 7E-19 131.2 25.7 193 195-410 34-237 (391)
112 2xyi_A Probable histone-bindin 99.7 1.2E-14 4E-19 138.3 24.9 256 123-408 115-412 (430)
113 3jro_A Fusion protein of prote 99.7 4.2E-15 1.4E-19 153.5 22.7 184 203-408 19-240 (753)
114 2j04_B YDR362CP, TAU91; beta p 99.7 3.5E-16 1.2E-20 158.2 14.2 186 198-407 213-429 (524)
115 4gq1_A NUP37; propeller, trans 99.7 1.7E-15 5.9E-20 143.1 17.4 194 196-410 92-352 (393)
116 4gga_A P55CDC, cell division c 99.7 7.5E-15 2.6E-19 138.5 21.4 180 207-410 118-314 (420)
117 2xyi_A Probable histone-bindin 99.7 3.5E-15 1.2E-19 142.0 18.8 195 194-406 130-353 (430)
118 2oaj_A Protein SNI1; WD40 repe 99.7 5.1E-15 1.7E-19 157.8 21.5 191 203-410 445-736 (902)
119 3bws_A Protein LP49; two-domai 99.7 2.5E-14 8.7E-19 132.4 23.3 196 198-410 175-394 (433)
120 4ggc_A P55CDC, cell division c 99.6 4.6E-14 1.6E-18 123.8 22.7 184 204-410 36-234 (318)
121 1pby_B Quinohemoprotein amine 99.6 1.7E-13 5.8E-18 120.7 24.5 262 106-410 2-314 (337)
122 3jro_A Fusion protein of prote 99.6 1E-13 3.5E-18 143.2 26.8 241 134-408 7-287 (753)
123 3u4y_A Uncharacterized protein 99.6 1E-12 3.5E-17 117.3 29.3 275 107-409 12-307 (331)
124 2w18_A PALB2, fancn, partner a 99.6 7.2E-14 2.5E-18 139.0 21.0 183 194-410 49-318 (356)
125 1ri6_A Putative isomerase YBHE 99.6 7.1E-12 2.4E-16 110.6 30.3 277 106-409 5-313 (343)
126 2j04_A TAU60, YPL007P, hypothe 99.6 2.5E-14 8.5E-19 150.2 17.1 175 203-387 95-289 (588)
127 4gq1_A NUP37; propeller, trans 99.6 1.5E-13 5.1E-18 129.9 19.9 181 203-405 154-388 (393)
128 3f3f_A Nucleoporin SEH1; struc 99.6 3.9E-13 1.3E-17 116.7 20.4 152 234-409 12-252 (351)
129 1nir_A Nitrite reductase; hemo 99.5 5.4E-13 1.8E-17 134.6 22.4 194 193-410 139-359 (543)
130 3vgz_A Uncharacterized protein 99.5 3.1E-11 1E-15 107.7 31.2 197 193-410 89-307 (353)
131 3hfq_A Uncharacterized protein 99.5 9.2E-11 3.1E-15 106.4 31.7 202 191-410 84-323 (347)
132 1nir_A Nitrite reductase; hemo 99.5 4.3E-12 1.5E-16 128.1 25.3 279 105-410 149-462 (543)
133 1jmx_B Amine dehydrogenase; ox 99.5 4.5E-12 1.5E-16 112.5 21.7 197 194-410 44-329 (349)
134 1xfd_A DIP, dipeptidyl aminope 99.5 8.2E-13 2.8E-17 131.6 18.4 224 167-410 2-293 (723)
135 3u4y_A Uncharacterized protein 99.5 7.3E-12 2.5E-16 111.8 22.0 189 200-409 5-210 (331)
136 3vgz_A Uncharacterized protein 99.5 1.6E-11 5.5E-16 109.5 23.6 207 190-410 38-266 (353)
137 2hqs_A Protein TOLB; TOLB, PAL 99.5 8E-12 2.8E-16 120.1 23.0 175 215-410 159-348 (415)
138 1pby_B Quinohemoprotein amine 99.4 2.2E-11 7.6E-16 107.2 22.4 188 206-410 2-273 (337)
139 1jmx_B Amine dehydrogenase; ox 99.4 1.9E-11 6.6E-16 108.5 19.6 150 203-359 9-185 (349)
140 2hqs_A Protein TOLB; TOLB, PAL 99.4 6E-11 2E-15 114.0 23.1 189 198-408 184-389 (415)
141 1ri6_A Putative isomerase YBHE 99.4 6.8E-10 2.3E-14 98.0 25.6 197 192-405 37-261 (343)
142 2ojh_A Uncharacterized protein 99.4 1.3E-10 4.3E-15 99.2 20.1 196 198-409 47-261 (297)
143 2oit_A Nucleoporin 214KDA; NH2 99.3 1.1E-10 3.7E-15 114.1 21.9 203 197-407 41-279 (434)
144 2j04_A TAU60, YPL007P, hypothe 99.3 1.4E-11 4.8E-16 129.5 16.5 149 233-409 85-257 (588)
145 1z68_A Fibroblast activation p 99.2 5.8E-11 2E-15 119.1 14.2 190 203-410 25-295 (719)
146 3scy_A Hypothetical bacterial 99.2 1.6E-08 5.3E-13 92.5 29.0 198 193-410 100-343 (361)
147 3hfq_A Uncharacterized protein 99.2 4.2E-09 1.4E-13 95.5 24.9 203 190-405 37-270 (347)
148 1q7f_A NHL, brain tumor CG1071 99.2 2.8E-09 9.6E-14 94.3 23.1 197 191-407 75-281 (286)
149 2ojh_A Uncharacterized protein 99.2 8.7E-09 3E-13 87.8 25.0 242 115-387 22-293 (297)
150 2z3z_A Dipeptidyl aminopeptida 99.2 3.4E-10 1.2E-14 113.0 18.7 205 177-407 10-294 (706)
151 2ecf_A Dipeptidyl peptidase IV 99.2 2.9E-10 9.8E-15 113.9 18.1 198 194-410 38-325 (741)
152 3o4h_A Acylamino-acid-releasin 99.2 9.7E-10 3.3E-14 108.1 21.0 186 202-410 30-231 (582)
153 2oit_A Nucleoporin 214KDA; NH2 99.2 6.7E-11 2.3E-15 115.6 12.2 169 215-408 23-224 (434)
154 1q7f_A NHL, brain tumor CG1071 99.2 6.5E-09 2.2E-13 92.0 23.1 200 190-409 27-240 (286)
155 1jof_A Carboxy-CIS,CIS-muconat 99.2 5.7E-08 1.9E-12 90.4 29.3 182 213-409 117-344 (365)
156 2ecf_A Dipeptidyl peptidase IV 99.1 1.9E-09 6.6E-14 108.0 19.5 261 116-408 65-416 (741)
157 3no2_A Uncharacterized protein 99.1 6.1E-09 2.1E-13 96.1 20.3 181 205-410 5-199 (276)
158 3fvz_A Peptidyl-glycine alpha- 99.1 5E-09 1.7E-13 96.7 18.7 198 190-406 88-322 (329)
159 3scy_A Hypothetical bacterial 99.1 6.2E-08 2.1E-12 88.5 25.5 239 150-409 14-296 (361)
160 2z3z_A Dipeptidyl aminopeptida 99.1 1E-08 3.4E-13 102.5 21.1 194 193-409 82-346 (706)
161 4a5s_A Dipeptidyl peptidase 4 99.1 4.9E-09 1.7E-13 107.6 18.9 210 168-408 3-296 (740)
162 3dsm_A Uncharacterized protein 99.0 5E-08 1.7E-12 90.6 23.0 184 213-410 15-216 (328)
163 1k32_A Tricorn protease; prote 99.0 1.1E-08 3.8E-13 109.1 19.5 190 199-409 251-464 (1045)
164 3o4h_A Acylamino-acid-releasin 99.0 9.1E-09 3.1E-13 101.2 17.3 260 107-406 35-315 (582)
165 1xfd_A DIP, dipeptidyl aminope 99.0 3.4E-08 1.2E-12 98.4 21.4 274 112-406 34-393 (723)
166 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.1E-07 3.6E-12 88.6 23.4 212 192-409 39-295 (365)
167 3fvz_A Peptidyl-glycine alpha- 99.0 2.7E-08 9.2E-13 91.8 18.5 209 190-410 21-281 (329)
168 3hrp_A Uncharacterized protein 99.0 1.2E-07 4.1E-12 92.3 24.0 210 187-410 125-358 (409)
169 2oiz_A Aromatic amine dehydrog 99.0 9.5E-07 3.3E-11 83.7 28.5 269 114-410 30-340 (361)
170 1z68_A Fibroblast activation p 98.9 4.9E-09 1.7E-13 105.2 11.8 197 198-408 65-348 (719)
171 3dsm_A Uncharacterized protein 98.9 3.8E-07 1.3E-11 84.7 23.2 191 195-409 46-256 (328)
172 1k32_A Tricorn protease; prote 98.9 6.5E-08 2.2E-12 103.2 19.0 190 197-410 342-604 (1045)
173 3pe7_A Oligogalacturonate lyas 98.8 2.2E-07 7.6E-12 84.7 18.7 189 202-409 44-276 (388)
174 2bkl_A Prolyl endopeptidase; m 98.8 6.8E-07 2.3E-11 91.1 24.3 243 138-409 122-400 (695)
175 3azo_A Aminopeptidase; POP fam 98.8 7.9E-08 2.7E-12 95.3 16.1 200 196-410 133-373 (662)
176 2dg1_A DRP35, lactonase; beta 98.8 1.2E-06 4.2E-11 78.8 21.5 203 193-409 45-265 (333)
177 3azo_A Aminopeptidase; POP fam 98.8 2.2E-07 7.4E-12 92.2 17.2 189 202-409 87-328 (662)
178 3pe7_A Oligogalacturonate lyas 98.8 8.6E-07 2.9E-11 80.8 19.7 197 202-409 89-332 (388)
179 2gop_A Trilobed protease; beta 98.7 2.8E-06 9.6E-11 76.4 21.0 182 198-409 64-294 (347)
180 1rwi_B Serine/threonine-protei 98.7 2.7E-06 9.1E-11 73.9 19.8 195 191-408 65-266 (270)
181 2xdw_A Prolyl endopeptidase; a 98.7 1.7E-05 5.9E-10 80.8 28.9 244 138-408 126-416 (710)
182 4a5s_A Dipeptidyl peptidase 4 98.7 4.2E-07 1.4E-11 93.3 16.9 141 236-388 19-193 (740)
183 2z2n_A Virginiamycin B lyase; 98.6 0.00017 5.7E-09 62.6 29.5 272 96-409 15-298 (299)
184 1qks_A Cytochrome CD1 nitrite 98.6 5.5E-06 1.9E-10 85.4 23.1 186 203-410 165-377 (567)
185 1rwi_B Serine/threonine-protei 98.6 3.8E-06 1.3E-10 72.9 18.0 192 194-408 25-224 (270)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 1.1E-05 3.8E-10 71.3 21.2 199 189-409 14-259 (314)
187 2gop_A Trilobed protease; beta 98.6 4.8E-05 1.6E-09 68.4 25.7 151 215-387 152-321 (347)
188 3c5m_A Oligogalacturonate lyas 98.6 4.8E-06 1.6E-10 75.4 19.0 194 203-409 45-276 (396)
189 2oiz_A Aromatic amine dehydrog 98.6 9.4E-06 3.2E-10 76.9 21.1 101 214-314 30-145 (361)
190 3e5z_A Putative gluconolactona 98.5 2.1E-05 7.1E-10 70.2 22.1 182 193-386 69-277 (296)
191 3e5z_A Putative gluconolactona 98.5 2.2E-05 7.5E-10 70.1 21.2 197 190-409 25-248 (296)
192 1yr2_A Prolyl oligopeptidase; 98.5 9.6E-06 3.3E-10 83.5 21.1 176 216-409 244-444 (741)
193 2xdw_A Prolyl endopeptidase; a 98.5 1E-05 3.5E-10 82.5 20.6 200 197-409 129-371 (710)
194 2z2n_A Virginiamycin B lyase; 98.4 7.5E-05 2.6E-09 64.8 22.1 192 193-408 57-256 (299)
195 2dg1_A DRP35, lactonase; beta 98.4 7.4E-06 2.5E-10 73.7 16.3 178 204-406 16-213 (333)
196 2hz6_A Endoplasmic reticulum t 98.4 1.9E-07 6.5E-12 89.1 5.9 179 205-410 9-196 (369)
197 3q7m_A Lipoprotein YFGL, BAMB; 98.4 0.00067 2.3E-08 62.7 29.4 262 103-410 51-341 (376)
198 2qc5_A Streptogramin B lactona 98.4 0.0001 3.4E-09 64.1 22.1 193 192-408 61-261 (300)
199 3c5m_A Oligogalacturonate lyas 98.4 3.9E-05 1.3E-09 69.4 20.1 188 202-409 89-332 (396)
200 3no2_A Uncharacterized protein 98.3 9.7E-06 3.3E-10 74.7 14.6 152 242-410 3-158 (276)
201 3g4e_A Regucalcin; six bladed 98.3 0.0002 6.9E-09 64.9 22.2 198 192-410 12-233 (297)
202 2mad_H Methylamine dehydrogena 98.3 0.00019 6.5E-09 69.3 23.2 179 213-410 95-354 (373)
203 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 0.00018 6.1E-09 63.5 21.0 193 193-407 71-300 (314)
204 2qe8_A Uncharacterized protein 98.3 9.9E-05 3.4E-09 68.7 19.6 199 193-409 17-281 (343)
205 1xip_A Nucleoporin NUP159; bet 98.2 3.9E-05 1.3E-09 76.4 17.7 171 197-388 42-236 (388)
206 2qc5_A Streptogramin B lactona 98.2 0.00046 1.6E-08 59.9 21.5 192 192-408 19-219 (300)
207 2mad_H Methylamine dehydrogena 98.2 0.00067 2.3E-08 65.4 23.9 190 216-410 48-311 (373)
208 3iuj_A Prolyl endopeptidase; h 98.1 0.00092 3.1E-08 68.7 25.9 242 138-409 130-408 (693)
209 2bkl_A Prolyl endopeptidase; m 98.1 0.00019 6.5E-09 73.2 19.8 187 203-408 77-306 (695)
210 2ghs_A AGR_C_1268P; regucalcin 98.1 0.0012 4.1E-08 61.1 22.7 192 194-409 50-262 (326)
211 1yr2_A Prolyl oligopeptidase; 98.1 0.0003 1E-08 72.4 20.4 188 203-407 116-351 (741)
212 1kb0_A Quinohemoprotein alcoho 98.0 0.001 3.4E-08 69.4 24.3 267 104-410 76-511 (677)
213 1qks_A Cytochrome CD1 nitrite 98.0 0.005 1.7E-07 63.4 28.7 276 105-407 167-478 (567)
214 1npe_A Nidogen, entactin; glyc 98.0 0.0023 7.8E-08 56.8 22.2 197 192-410 35-242 (267)
215 3nol_A Glutamine cyclotransfer 98.0 0.00094 3.2E-08 64.0 20.7 179 198-386 48-245 (262)
216 3mbr_X Glutamine cyclotransfer 98.0 0.0013 4.6E-08 62.1 21.5 178 198-386 26-224 (243)
217 2qe8_A Uncharacterized protein 98.0 0.00075 2.6E-08 62.7 19.4 159 226-387 10-216 (343)
218 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.005 1.7E-07 56.8 24.2 225 101-358 99-346 (376)
219 3g4e_A Regucalcin; six bladed 97.9 0.0015 5.2E-08 59.2 19.8 198 194-403 55-283 (297)
220 1yiq_A Quinohemoprotein alcoho 97.9 0.0041 1.4E-07 64.9 25.5 55 340-410 454-509 (689)
221 2iwa_A Glutamine cyclotransfer 97.9 0.0068 2.3E-07 57.6 24.8 182 198-387 26-227 (266)
222 3sjl_D Methylamine dehydrogena 97.9 0.014 4.8E-07 58.2 27.7 267 114-410 58-367 (386)
223 3c75_H MADH, methylamine dehyd 97.8 0.013 4.4E-07 59.0 27.3 270 115-410 99-406 (426)
224 2hz6_A Endoplasmic reticulum t 97.8 2.2E-05 7.5E-10 74.9 5.8 127 258-410 20-153 (369)
225 2p4o_A Hypothetical protein; p 97.8 0.0093 3.2E-07 54.5 22.9 194 193-409 32-244 (306)
226 3nok_A Glutaminyl cyclase; bet 97.8 0.0012 4.1E-08 63.6 17.4 177 198-385 60-254 (268)
227 2ghs_A AGR_C_1268P; regucalcin 97.7 0.01 3.5E-07 54.8 21.7 182 194-387 91-293 (326)
228 1mda_H Methylamine dehydrogena 97.6 0.0011 3.6E-08 65.2 15.3 195 194-410 67-350 (368)
229 1npe_A Nidogen, entactin; glyc 97.6 0.027 9.4E-07 49.8 22.7 177 214-408 9-200 (267)
230 3hrp_A Uncharacterized protein 97.6 0.014 4.6E-07 56.8 21.7 196 192-404 171-408 (409)
231 3iuj_A Prolyl endopeptidase; h 97.5 0.0038 1.3E-07 64.1 18.4 156 236-409 131-317 (693)
232 3dr2_A Exported gluconolactona 97.5 0.011 3.8E-07 53.5 18.6 177 195-386 88-297 (305)
233 3hxj_A Pyrrolo-quinoline quino 97.5 0.00053 1.8E-08 61.0 9.6 163 202-383 28-194 (330)
234 1kv9_A Type II quinohemoprotei 97.5 0.023 8E-07 59.0 23.3 267 103-410 64-492 (668)
235 1xip_A Nucleoporin NUP159; bet 97.5 0.0015 5.1E-08 65.0 13.8 142 235-409 39-194 (388)
236 3nol_A Glutamine cyclotransfer 97.4 0.0084 2.9E-07 57.5 18.3 170 224-410 30-205 (262)
237 3sjl_D Methylamine dehydrogena 97.4 0.016 5.6E-07 57.7 21.0 187 204-408 44-258 (386)
238 3dr2_A Exported gluconolactona 97.4 0.027 9.3E-07 50.9 20.2 198 192-409 44-269 (305)
239 3mbr_X Glutamine cyclotransfer 97.3 0.025 8.5E-07 53.5 19.8 170 224-410 8-183 (243)
240 3hxj_A Pyrrolo-quinoline quino 97.3 0.0087 3E-07 53.1 15.6 162 202-382 145-311 (330)
241 2iwa_A Glutamine cyclotransfer 97.3 0.03 1E-06 53.1 19.7 171 223-410 7-185 (266)
242 3nok_A Glutaminyl cyclase; bet 97.2 0.023 7.9E-07 54.7 17.8 165 226-410 44-214 (268)
243 2ece_A 462AA long hypothetical 97.1 0.051 1.8E-06 56.0 21.3 191 206-405 97-351 (462)
244 1flg_A Protein (quinoprotein e 97.1 0.32 1.1E-05 50.0 27.6 55 340-410 465-520 (582)
245 3c75_H MADH, methylamine dehyd 97.0 0.1 3.4E-06 52.5 21.9 168 206-381 86-280 (426)
246 3v65_B Low-density lipoprotein 96.9 0.2 6.8E-06 48.2 22.2 198 190-408 113-320 (386)
247 2ad6_A Methanol dehydrogenase 96.8 0.56 1.9E-05 47.9 27.2 188 104-314 61-340 (571)
248 3tc9_A Hypothetical hydrolase; 96.8 0.31 1.1E-05 47.8 22.8 161 188-351 132-302 (430)
249 1kb0_A Quinohemoprotein alcoho 96.7 0.08 2.7E-06 55.2 18.5 192 204-410 77-350 (677)
250 3v64_C Agrin; beta propeller, 96.6 0.49 1.7E-05 44.8 22.1 198 190-408 70-277 (349)
251 1yiq_A Quinohemoprotein alcoho 96.6 0.19 6.5E-06 52.5 20.3 192 204-410 70-342 (689)
252 1kv9_A Type II quinohemoprotei 96.4 0.22 7.4E-06 51.8 19.4 191 204-410 66-337 (668)
253 3kya_A Putative phosphatase; s 96.3 0.81 2.8E-05 47.2 23.0 210 188-409 134-478 (496)
254 1w6s_A Methanol dehydrogenase 96.3 1.3 4.5E-05 46.1 26.6 55 340-410 452-507 (599)
255 3m0c_C LDL receptor, low-densi 96.0 1.1 3.7E-05 48.4 23.0 161 191-356 422-595 (791)
256 1ijq_A LDL receptor, low-densi 95.9 1 3.6E-05 41.7 23.1 198 191-408 28-240 (316)
257 1mda_H Methylamine dehydrogena 95.9 0.44 1.5E-05 46.7 17.7 102 205-309 32-158 (368)
258 1n7d_A LDL receptor, low-densi 95.8 0.1 3.5E-06 54.9 13.9 199 191-409 404-617 (699)
259 3p5b_L Low density lipoprotein 95.8 1.5 5E-05 42.5 23.5 196 191-408 110-322 (400)
260 4hw6_A Hypothetical protein, I 95.8 1.6 5.6E-05 42.9 21.9 203 191-409 137-376 (433)
261 3v64_C Agrin; beta propeller, 95.8 1.3 4.6E-05 41.8 20.3 163 190-358 113-284 (349)
262 3v65_B Low-density lipoprotein 95.8 1.1 3.7E-05 43.1 19.7 164 190-359 156-328 (386)
263 1k3i_A Galactose oxidase precu 95.7 0.47 1.6E-05 48.5 17.8 205 203-409 252-500 (656)
264 3p5b_L Low density lipoprotein 95.7 1.3 4.3E-05 43.0 19.9 164 190-359 156-330 (400)
265 1k3i_A Galactose oxidase precu 95.4 1.1 3.9E-05 45.7 19.3 209 195-408 188-443 (656)
266 1flg_A Protein (quinoprotein e 95.3 1.7 5.8E-05 44.6 20.3 191 204-410 68-359 (582)
267 3m0c_C LDL receptor, low-densi 95.2 4.2 0.00014 43.9 24.3 164 190-359 468-642 (791)
268 3sov_A LRP-6, low-density lipo 95.2 2.1 7.1E-05 40.3 20.8 197 192-409 34-241 (318)
269 2ad6_A Methanol dehydrogenase 95.2 3 0.0001 42.5 21.6 79 257-341 444-527 (571)
270 2fp8_A Strictosidine synthase; 94.9 2.2 7.5E-05 38.7 21.0 195 192-405 79-312 (322)
271 4a0p_A LRP6, LRP-6, low-densit 94.8 3.5 0.00012 42.9 21.4 197 192-408 339-551 (628)
272 2xe4_A Oligopeptidase B; hydro 94.8 2.8 9.6E-05 43.9 20.6 194 198-409 226-461 (751)
273 3amr_A 3-phytase; beta-propell 94.8 3.7 0.00013 40.9 22.7 184 201-408 37-266 (355)
274 1fwx_A Nitrous oxide reductase 94.7 1.7 5.7E-05 46.2 18.8 191 214-410 174-435 (595)
275 3qqz_A Putative uncharacterize 94.4 3.4 0.00011 38.8 22.8 186 193-382 27-240 (255)
276 3s94_A LRP-6, low-density lipo 94.4 3.4 0.00012 42.9 19.9 199 190-408 37-245 (619)
277 4a2l_A BT_4663, two-component 94.3 5.6 0.00019 41.1 22.5 171 202-384 460-649 (795)
278 2fp8_A Strictosidine synthase; 94.1 3.3 0.00011 37.5 19.6 183 190-385 16-248 (322)
279 1w6s_A Methanol dehydrogenase 93.9 4.6 0.00016 42.0 19.8 142 258-410 132-346 (599)
280 4hw6_A Hypothetical protein, I 93.8 2 6.9E-05 42.2 16.1 242 115-405 162-432 (433)
281 1n7d_A LDL receptor, low-densi 93.5 0.43 1.5E-05 50.1 11.5 164 191-360 451-625 (699)
282 3kya_A Putative phosphatase; s 93.4 8.2 0.00028 39.8 24.3 232 114-353 161-478 (496)
283 4a0p_A LRP6, LRP-6, low-densit 93.3 9 0.00031 39.9 21.0 194 192-408 36-239 (628)
284 1ijq_A LDL receptor, low-densi 93.2 5.2 0.00018 36.9 25.0 164 190-359 74-248 (316)
285 4a2l_A BT_4663, two-component 93.0 9.6 0.00033 39.4 23.2 170 203-383 415-603 (795)
286 3tc9_A Hypothetical hydrolase; 92.9 7.5 0.00026 38.0 25.5 251 106-404 150-428 (430)
287 2vpj_A Kelch-like protein 12; 92.9 4.9 0.00017 35.8 22.7 194 204-408 62-280 (301)
288 3sov_A LRP-6, low-density lipo 92.4 7.2 0.00025 36.6 20.5 162 190-357 76-246 (318)
289 3ii7_A Kelch-like protein 7; p 92.3 5.9 0.0002 35.4 22.9 194 204-408 55-274 (306)
290 3s94_A LRP-6, low-density lipo 92.1 12 0.00042 38.7 22.2 175 192-376 348-532 (619)
291 2xn4_A Kelch-like protein 2; s 92.1 6.3 0.00022 35.2 22.9 194 204-408 61-278 (302)
292 2vpj_A Kelch-like protein 12; 91.6 7 0.00024 34.8 19.9 195 203-408 13-233 (301)
293 2xzh_A Clathrin heavy chain 1; 91.6 4.3 0.00015 41.0 15.1 152 237-407 29-190 (365)
294 2ece_A 462AA long hypothetical 91.4 3.9 0.00013 42.2 15.0 118 290-410 95-241 (462)
295 1zgk_A Kelch-like ECH-associat 91.3 8.1 0.00028 34.9 19.7 194 204-408 70-289 (308)
296 3v9f_A Two-component system se 90.6 16 0.00054 37.7 18.7 172 202-384 458-646 (781)
297 2xe4_A Oligopeptidase B; hydro 90.5 5.9 0.0002 41.4 15.6 112 198-310 179-305 (751)
298 3v9f_A Two-component system se 90.3 18 0.00062 37.2 21.1 173 203-383 416-600 (781)
299 1bpo_A Protein (clathrin); cla 89.9 5.5 0.00019 41.7 14.5 131 236-381 27-166 (494)
300 2p9w_A MAL S 1 allergenic prot 89.8 17 0.00057 36.0 18.9 163 192-386 12-205 (334)
301 4asc_A Kelch repeat and BTB do 89.4 12 0.0004 33.8 19.1 163 240-408 95-279 (315)
302 3sre_A PON1, serum paraoxonase 88.3 20 0.00069 35.1 18.4 80 184-267 61-149 (355)
303 1fwx_A Nitrous oxide reductase 88.3 2 6.8E-05 45.6 10.1 126 175-309 312-468 (595)
304 4fhn_B Nucleoporin NUP120; pro 86.6 1.4 4.8E-05 48.8 8.1 32 369-410 241-272 (1139)
305 4gq2_M Nucleoporin NUP120; bet 85.5 2.7 9.1E-05 46.1 9.5 33 368-410 238-270 (950)
306 3pbp_A Nucleoporin NUP82; beta 84.9 13 0.00043 38.6 13.5 135 182-349 8-157 (452)
307 1zgk_A Kelch-like ECH-associat 82.0 28 0.00097 31.2 20.0 194 204-408 24-242 (308)
308 2p4o_A Hypothetical protein; p 81.3 30 0.001 31.1 22.7 184 194-386 73-278 (306)
309 4gq2_M Nucleoporin NUP120; bet 80.8 17 0.00059 39.8 13.5 40 318-357 230-274 (950)
310 2uvk_A YJHT; unknown function, 80.8 33 0.0011 31.2 17.8 141 257-410 168-346 (357)
311 3ei3_A DNA damage-binding prot 80.5 52 0.0018 37.1 17.4 132 217-353 442-595 (1158)
312 2xn4_A Kelch-like protein 2; s 78.2 36 0.0012 30.2 19.9 193 205-408 16-231 (302)
313 3q6k_A 43.2 kDa salivary prote 77.3 61 0.0021 32.3 16.0 100 235-335 88-216 (381)
314 1xi4_A Clathrin heavy chain; a 76.9 18 0.00063 42.7 12.6 154 236-407 27-189 (1630)
315 3sre_A PON1, serum paraoxonase 73.9 24 0.00084 34.5 11.1 83 298-384 81-183 (355)
316 3f7f_A Nucleoporin NUP120; nuc 70.3 92 0.0032 34.0 15.4 79 322-410 162-254 (729)
317 1suu_A DNA gyrase subunit A; t 68.7 80 0.0027 29.9 14.1 135 99-242 2-159 (312)
318 2woz_A Kelch repeat and BTB do 68.2 68 0.0023 28.8 21.5 164 239-408 105-289 (318)
319 3f7f_A Nucleoporin NUP120; nuc 67.6 11 0.00039 41.0 7.7 62 288-350 228-305 (729)
320 3s25_A Hypothetical 7-bladed b 66.4 86 0.003 29.4 16.3 146 193-351 16-177 (302)
321 3ii7_A Kelch-like protein 7; p 65.7 73 0.0025 28.3 20.3 193 205-408 12-227 (306)
322 3ei3_A DNA damage-binding prot 61.8 2.1E+02 0.0072 32.2 22.6 96 214-312 806-916 (1158)
323 3a9g_A Putative uncharacterize 56.8 98 0.0034 29.3 11.4 93 285-383 33-152 (354)
324 3a9g_A Putative uncharacterize 56.3 68 0.0023 30.4 10.2 67 317-385 25-96 (354)
325 4fhn_B Nucleoporin NUP120; pro 55.9 15 0.0005 40.8 6.1 36 321-356 235-275 (1139)
326 2xbg_A YCF48-like protein; pho 54.3 1.3E+02 0.0045 27.6 14.1 143 198-347 168-319 (327)
327 2ism_A Putative oxidoreductase 54.2 1.3E+02 0.0043 28.3 11.6 95 285-383 35-152 (352)
328 3amr_A 3-phytase; beta-propell 50.4 2E+02 0.0069 28.5 20.3 144 207-357 89-272 (355)
329 2zwa_A Leucine carboxyl methyl 44.6 2.9E+02 0.0099 28.7 17.0 180 204-387 451-676 (695)
330 2ism_A Putative oxidoreductase 43.7 1.1E+02 0.0038 28.7 9.4 66 318-386 28-99 (352)
331 2be1_A Serine/threonine-protei 41.4 1E+02 0.0036 29.9 9.0 28 289-316 110-137 (339)
332 2kr7_A FKBP-type peptidyl-prol 41.3 24 0.00083 30.4 4.1 59 226-285 79-137 (151)
333 4asc_A Kelch repeat and BTB do 37.1 2.3E+02 0.0077 25.3 22.5 189 207-408 7-223 (315)
334 3uc1_A DNA gyrase subunit A; D 34.7 3.1E+02 0.011 26.2 15.2 192 104-308 2-227 (327)
335 2uvk_A YJHT; unknown function, 34.5 2.6E+02 0.0089 25.2 16.9 122 215-338 168-323 (357)
336 1uhe_A Aspartate 1-decarboxyla 33.0 22 0.00076 29.8 2.4 30 298-330 15-46 (97)
337 1vc3_B L-aspartate-alpha-decar 32.1 24 0.00081 29.6 2.4 17 298-314 16-32 (96)
338 4dt4_A FKBP-type 16 kDa peptid 31.2 34 0.0012 30.5 3.4 59 226-285 97-156 (169)
339 2lcj_A PAB POLC intein; hydrol 30.3 2.4E+02 0.0084 24.5 8.8 66 206-272 48-119 (185)
340 3s9j_A Member of DUF4221 famil 30.1 2.4E+02 0.0081 27.8 9.6 111 298-410 48-178 (369)
341 3plx_B Aspartate 1-decarboxyla 30.0 27 0.00092 29.6 2.4 17 298-314 16-32 (102)
342 2woz_A Kelch repeat and BTB do 29.7 3E+02 0.01 24.5 19.5 188 205-408 16-233 (318)
343 3oug_A Aspartate 1-decarboxyla 28.6 29 0.00098 29.9 2.3 17 298-314 43-59 (114)
344 2i9o_A MHB8A peptide; beta-hai 28.2 18 0.00061 25.1 0.8 8 2-9 12-19 (37)
345 2xzh_A Clathrin heavy chain 1; 26.4 5.1E+02 0.018 26.1 19.4 186 203-410 76-294 (365)
346 2g8s_A Glucose/sorbosone dehyd 26.3 1.3E+02 0.0043 28.4 6.7 69 318-386 15-90 (353)
347 1pqh_A Aspartate 1-decarboxyla 25.9 34 0.0011 30.6 2.4 17 298-314 57-73 (143)
348 1wp5_A Topoisomerase IV; broke 25.9 4.3E+02 0.015 25.1 11.3 117 102-227 2-128 (323)
349 2c45_A Aspartate 1-decarboxyla 25.6 35 0.0012 30.3 2.4 17 298-314 40-56 (139)
350 3cgm_A SLYD, peptidyl-prolyl C 24.2 52 0.0018 28.7 3.3 59 226-285 69-128 (158)
351 2p9w_A MAL S 1 allergenic prot 24.1 5.2E+02 0.018 25.3 15.1 153 193-350 63-265 (334)
352 3q6k_A 43.2 kDa salivary prote 23.4 5E+02 0.017 25.7 10.6 91 162-252 243-343 (381)
353 2i7u_A Four-alpha-helix bundle 23.1 20 0.00067 27.3 0.3 7 2-8 27-33 (62)
354 4es8_A EPF; carbohydrate-bindi 22.2 1.3E+02 0.0044 28.7 5.7 54 299-361 206-268 (320)
355 1oh1_A Staphostatin A; cystein 21.1 88 0.003 26.4 3.8 28 123-153 49-77 (109)
356 3pqi_A Gene product 138; beta- 20.4 2.2E+02 0.0076 27.0 7.0 55 333-387 86-158 (247)
357 2zwa_A Leucine carboxyl methyl 20.1 7.4E+02 0.025 25.6 19.3 197 203-408 396-637 (695)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.90 E-value=6e-21 Score=181.42 Aligned_cols=268 Identities=11% Similarity=0.157 Sum_probs=209.3
Q ss_pred cccceEEEeecc--ceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeee
Q 015220 94 KRSKIIEIVAAR--DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (411)
Q Consensus 94 ~RS~V~EIv~a~--dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 171 (411)
-+.+|.-+.+.. .+++.-...|...+||..+++.+..+.. +..-|.++-++...+-|++.| .|. .+ +.-+
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~~l~sgs---~D~--~i--~iwd 178 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGKLLASCS---ADM--TI--KLWD 178 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSSEEEEEE---TTS--CC--CEEE
T ss_pred cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCCEEEEEe---CCC--eE--EEEe
Confidence 456777777663 4677777889999999999998888875 455678998888776665533 222 22 2222
Q ss_pred hhhhhhCCCCCCCcceeecccCCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCE
Q 015220 172 IEYIRRGKPDAGFALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGI 245 (411)
Q Consensus 172 ~~~i~~gk~~~~~~LF~~~~l~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~ 245 (411)
+ ..++ .+-. .-.|.+. +.|. ++|..|++++.|+++++||+++.+++.++..+ .|..+..+ +|.
T Consensus 179 ~---~~~~-----~~~~--~~~h~~~V~~v~~~-p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~ 247 (410)
T 1vyh_C 179 F---QGFE-----CIRT--MHGHDHNVSSVSIM-PNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 247 (410)
T ss_dssp T---TSSC-----EEEC--CCCCSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred C---CCCc-----eeEE--EcCCCCCEEEEEEe-CCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC
Confidence 1 1111 0100 0122322 3454 47888999999999999999999999998866 79999999 888
Q ss_pred EEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecc----------------------eeEEeecCceee
Q 015220 246 MLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE----------------------KLLVKQENENLQ 303 (411)
Q Consensus 246 ~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~e----------------------kllIKQe~~~Lk 303 (411)
+|+...... .|+||++.+++...+ +.+|..+|..+...++ .++....+..|+
T Consensus 248 ~l~s~s~D~---~v~vwd~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 248 LIASCSNDQ---TVRVWVVATKECKAE---LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp EEEEEETTS---CEEEEETTTCCEEEE---ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred EEEEEcCCC---eEEEEECCCCceeeE---ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEE
Confidence 888776543 489999999999988 6689999999998874 356667889999
Q ss_pred EEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCC
Q 015220 304 ILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD 378 (411)
Q Consensus 304 I~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd 378 (411)
|||+.+++... +..+|...+..+..+ +.++|+ .|++|++||++ |+++.++.+|.. .+..+..+||+.
T Consensus 322 iwd~~~~~~~~---~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~-----~v~~l~~~~~~~ 393 (410)
T 1vyh_C 322 MWDVSTGMCLM---TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEH-----FVTSLDFHKTAP 393 (410)
T ss_dssp EEETTTTEEEE---EEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSS-----CEEEEEECSSSS
T ss_pred EEECCCCceEE---EEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC-----cEEEEEEcCCCC
Confidence 99999999887 788899999888876 678888 78999999998 899999999988 799999999999
Q ss_pred EEEEEecCCCCCccccCCceEEEeee
Q 015220 379 LIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 379 ~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
+|+|||.|. +|+|||+
T Consensus 394 ~l~sgs~D~----------~i~vW~~ 409 (410)
T 1vyh_C 394 YVVTGSVDQ----------TVKVWEC 409 (410)
T ss_dssp CEEEEETTS----------EEEEEC-
T ss_pred EEEEEeCCC----------cEEEEeC
Confidence 999999997 9999996
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.89 E-value=2.2e-20 Score=169.43 Aligned_cols=185 Identities=11% Similarity=0.125 Sum_probs=151.2
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccC
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN 280 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~ 280 (411)
+|+.|+..+.|++++|||+++.+++.++..+ .|..+.++ +|.+|+....- --|+||+++++..+.. .+-+|.
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~--~~~~h~ 140 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQ--TFEGHE 140 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEE--EECCCC
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhh--hhcccC
Confidence 5677888999999999999999999999865 79999999 77777776543 3589999999955432 156899
Q ss_pred Ccceeeeeec-c--eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----eeEEEE-ecCeEEEEecC-C
Q 015220 281 KKVDFIEQFN-E--KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----QLFLTF-RNRTVAVWNFR-G 350 (411)
Q Consensus 281 K~I~FLE~~~-e--kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----qlFlSf-sd~tI~iWn~~-G 350 (411)
.+|..+..++ + .+...+.+..+++||+.+++..... ...|...+.++... ++++|+ .|++|++||++ |
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL--TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE--ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee--ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 9999999987 3 3455678999999999887654411 12344555555432 578888 89999999999 9
Q ss_pred ceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 351 ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 351 el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++.++++|.. .+..+..+||+.+|+||+.|. +|+|||+.||+++
T Consensus 219 ~~~~~~~~h~~-----~v~~~~~~p~~~~l~s~s~Dg----------~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 219 SCVATLEGHMS-----NVSFAVFHPTLPIIISGSEDG----------TLKIWNSSTYKVE 263 (304)
T ss_dssp EEEEEEECCSS-----CEEEEEECSSSSEEEEEETTS----------CEEEEETTTCCEE
T ss_pred ccceeeCCCCC-----CEEEEEECCCCCEEEEEcCCC----------eEEEEECCCCcee
Confidence 99999999998 899999999999999999997 9999999999975
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.89 E-value=8.4e-20 Score=168.53 Aligned_cols=260 Identities=14% Similarity=0.130 Sum_probs=200.5
Q ss_pred ceehhhhccccceeeecccccEEEEEe-CCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLN-VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN-~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
++++.-..-|...+|+..+++..+... .++..-|.++-++.....+++.| .+ ..++ .- ++..|+.-
T Consensus 49 ~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s----~D-~~i~--lW---d~~~~~~~--- 115 (321)
T 3ow8_A 49 ETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS----LD-AHIR--LW---DLENGKQI--- 115 (321)
T ss_dssp CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE----TT-SEEE--EE---ETTTTEEE---
T ss_pred CEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe----CC-CcEE--EE---ECCCCCEE---
Confidence 366666778899999987777655332 35667788998888766555433 22 1222 22 22222210
Q ss_pred cceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEE
Q 015220 185 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKI 261 (411)
Q Consensus 185 ~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKI 261 (411)
.-+.... ...--+.|. ++|+.|+....++++++||+++.+.++++..+ .|..+.+| ||.+|++..... .|+|
T Consensus 116 ~~~~~~~-~~~~~~~~s-pdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg---~i~i 190 (321)
T 3ow8_A 116 KSIDAGP-VDAWTLAFS-PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG---IINI 190 (321)
T ss_dssp EEEECCT-TCCCCEEEC-TTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTS---CEEE
T ss_pred EEEeCCC-ccEEEEEEC-CCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCC---eEEE
Confidence 0011100 001124554 68999999999999999999999999888755 79999999 899888876544 4899
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEE
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFL 336 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFl 336 (411)
|++.+|+++.+ +-+|..+|..+..++++.++. ..+..|+|||+.+++... +..+|...+..++.+ +.++
T Consensus 191 wd~~~~~~~~~---~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~---~~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 191 FDIATGKLLHT---LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG---TLSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp EETTTTEEEEE---ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEE
T ss_pred EECCCCcEEEE---EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE---EEcCCCCceEEEEECCCCCEEE
Confidence 99999999998 568999999999999876554 467889999999999887 788899999998876 6778
Q ss_pred EE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeee
Q 015220 337 TF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 337 Sf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
|. .|++|++||++ |+++.+|.+|.. .+..+..+|||..|+|++.|. +|+|||.
T Consensus 265 s~s~D~~v~iwd~~~~~~~~~~~~h~~-----~v~~v~~s~~g~~l~s~~~d~----------~i~vwd~ 319 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRTCVHTFFDHQD-----QVWGVKYNGNGSKIVSVGDDQ----------EIHIYDC 319 (321)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTC----------CEEEEEC
T ss_pred EEeCCCcEEEEeCCCCEEEEEEcCCCC-----cEEEEEECCCCCEEEEEeCCC----------eEEEEeC
Confidence 88 88999999999 999999999988 899999999999999999997 9999996
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.89 E-value=1.3e-21 Score=185.88 Aligned_cols=235 Identities=14% Similarity=0.254 Sum_probs=184.8
Q ss_pred CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCe---EEeeCCCCeEEEe
Q 015220 134 TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGF---VEFDDVNGKVLTY 210 (411)
Q Consensus 134 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgf---vEFDd~NGkiLt~ 210 (411)
++..-|.++-++.....|++.| .|. .++.- ++..|++-. -| -.|.+. +.|+ ++|+.|++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s---~Dg--~i~vw-----d~~~~~~~~---~l----~~h~~~V~~v~~~-~~~~~l~s 167 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSAS---EDA--TIKVW-----DYETGDFER---TL----KGHTDSVQDISFD-HSGKLLAS 167 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEE---SSS--CEEEE-----ETTTCCCCE---EE----CCCSSCEEEEEEC-TTSSEEEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEe---CCC--eEEEE-----ECCCCcEEE---EE----eccCCcEEEEEEc-CCCCEEEE
Confidence 4556678888887666555533 222 22222 222332210 11 123333 5675 68999999
Q ss_pred ecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeee
Q 015220 211 SAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIE 287 (411)
Q Consensus 211 ~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE 287 (411)
++.|++++|||+.+++++.++.++ .|..+.++ +|.+|+..... -.|+||++.+|+.+++ +-+|...|..+.
T Consensus 168 gs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~---~~~h~~~v~~~~ 241 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKT---FTGHREWVRMVR 241 (410)
T ss_dssp EETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEE---EECCSSCEEEEE
T ss_pred EeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEE---EeCCCccEEEEE
Confidence 999999999999999999999865 89999999 77777776543 3589999999999998 568999999999
Q ss_pred eecceeEEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----------------------eeEEEE-ecC
Q 015220 288 QFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----------------------QLFLTF-RNR 341 (411)
Q Consensus 288 ~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----------------------qlFlSf-sd~ 341 (411)
.++++.++. +.+..+++||+.+++... +...|+..+.++..+ .+++|+ .|+
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKA---ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceee---EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 998876554 577899999999999887 777888888888764 368888 889
Q ss_pred eEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 342 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 342 tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+|++||++ |.++.++.+|.. .++.+.++|||++|+||+.|. +|++||+.+|+|+
T Consensus 319 ~i~iwd~~~~~~~~~~~~h~~-----~v~~v~~~~~g~~l~s~s~D~----------~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 319 TIKMWDVSTGMCLMTLVGHDN-----WVRGVLFHSGGKFILSCADDK----------TLRVWDYKNKRCM 373 (410)
T ss_dssp EEEEEETTTTEEEEEEECCSS-----CEEEEEECSSSSCEEEEETTT----------EEEEECCTTSCCC
T ss_pred eEEEEECCCCceEEEEECCCC-----cEEEEEEcCCCCEEEEEeCCC----------eEEEEECCCCceE
Confidence 99999999 999999999988 789999999999999999997 9999999999874
No 5
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.88 E-value=7.4e-21 Score=174.09 Aligned_cols=188 Identities=13% Similarity=0.173 Sum_probs=159.0
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeC-----ceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKN-----YTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~-----Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
+.|...++..|++.+.|+++++||+.+ ..++.++.++ .|..+.++ ||.+|+....- --|+||++++|+.
T Consensus 23 l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D---~~v~~wd~~~~~~ 99 (319)
T 3frx_A 23 LATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD---KTLRLWDVATGET 99 (319)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEE
T ss_pred EEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC---CEEEEEECCCCCe
Confidence 456666778999999999999999975 2356777765 89999999 88888877644 3589999999999
Q ss_pred EeEeeeccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEEeeccccCCCceEEEEeece---------eEEEE
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ---------LFLTF 338 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sq---------lFlSf 338 (411)
+.+ +.+|..+|..+..+++..++ .+.+..+++||+... ... +..+|...+..+.... .+++.
T Consensus 100 ~~~---~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~-~~~---~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~ 172 (319)
T 3frx_A 100 YQR---FVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ-CLA---TLLGHNDWVSQVRVVPNEKADDDSVTIISA 172 (319)
T ss_dssp EEE---EECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-EEE---EECCCSSCEEEEEECCC------CCEEEEE
T ss_pred eEE---EccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eEE---EEeccCCcEEEEEEccCCCCCCCccEEEEE
Confidence 998 66999999999999886544 457889999999754 333 6778988888877652 67777
Q ss_pred -ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 339 -RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 339 -sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.|++|++||++ +.+..++.+|.. .++.+..+|||++|+|++.|. +|+|||+.+++++
T Consensus 173 ~~d~~i~~wd~~~~~~~~~~~~h~~-----~v~~~~~sp~g~~l~s~~~dg----------~i~iwd~~~~~~~ 231 (319)
T 3frx_A 173 GNDKMVKAWNLNQFQIEADFIGHNS-----NINTLTASPDGTLIASAGKDG----------EIMLWNLAAKKAM 231 (319)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCCS-----CEEEEEECTTSSEEEEEETTC----------EEEEEETTTTEEE
T ss_pred eCCCEEEEEECCcchhheeecCCCC-----cEEEEEEcCCCCEEEEEeCCC----------eEEEEECCCCcEE
Confidence 89999999999 889999999998 899999999999999999997 9999999999875
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.88 E-value=1.9e-19 Score=165.76 Aligned_cols=271 Identities=12% Similarity=0.156 Sum_probs=199.6
Q ss_pred ccceEEEeeccc--eehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 95 RSKIIEIVAARD--IVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 95 RS~V~EIv~a~d--ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
..+|..+-...| +++.-...|....||..+++.+..+.. +...|.++-++.....|++.| .|. . ++.-.
T Consensus 55 ~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~---~d~--~--v~iw~- 125 (340)
T 1got_B 55 LAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGNYVACGG---LDN--I--CSIYN- 125 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSSEEEEEE---TTC--E--EEEEE-
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCCEEEEEe---CCC--e--EEEEE-
Confidence 345666655533 677777889999999999998887765 455678888888776665533 222 2 22222
Q ss_pred hhhhhCCCCCCCcceeecccCCCCeE---EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEE
Q 015220 173 EYIRRGKPDAGFALFESESLKWPGFV---EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIM 246 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~l~~Pgfv---EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~ 246 (411)
+..++ +..-.....-.|.+.| .|. ++++ ++..+.|++++|||+++.+++.++..+ .|..+.++ +|.+
T Consensus 126 --~~~~~---~~~~~~~~~~~h~~~v~~~~~~-~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 198 (340)
T 1got_B 126 --LKTRE---GNVRVSRELAGHTGYLSCCRFL-DDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198 (340)
T ss_dssp --TTTCS---BSCEEEEEEECCSSCEEEEEEE-ETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred --CccCC---CcceeEEEecCCCccEEEEEEC-CCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCE
Confidence 11111 1111122223455554 343 3455 667788999999999999999999865 79999999 7777
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCc
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPS 324 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hps 324 (411)
|+...... .|+||++.+|+.+.+ +-+|..+|..+..++++- +..+.+..|++||+.+++....- ..-.+..
T Consensus 199 l~sg~~d~---~v~~wd~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~-~~~~~~~ 271 (340)
T 1got_B 199 FVSGACDA---SAKLWDVREGMCRQT---FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY-SHDNIIC 271 (340)
T ss_dssp EEEEETTS---CEEEEETTTCSEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-CCTTCCS
T ss_pred EEEEeCCC---cEEEEECCCCeeEEE---EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE-ccCCccc
Confidence 77765443 589999999999998 568999999999998765 44557889999999998876521 1112334
Q ss_pred eEEEEeec---eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceE
Q 015220 325 AFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKL 399 (411)
Q Consensus 325 AfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI 399 (411)
.+..+..+ ++++++ .|++|++||.. ++++.+|.+|.. .+..+.++|||.+|+|||.|. +|
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~s~D~----------~i 336 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN-----RVSCLGVTDDGMAVATGSWDS----------FL 336 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECTTSSCEEEEETTS----------CE
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC-----cEEEEEEcCCCCEEEEEcCCc----------cE
Confidence 67777765 678888 88999999998 999999999998 899999999999999999997 99
Q ss_pred EEee
Q 015220 400 FVSL 403 (411)
Q Consensus 400 ~i~~ 403 (411)
+|||
T Consensus 337 ~iWd 340 (340)
T 1got_B 337 KIWN 340 (340)
T ss_dssp EEEC
T ss_pred EecC
Confidence 9997
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.88 E-value=3.7e-21 Score=177.59 Aligned_cols=187 Identities=18% Similarity=0.153 Sum_probs=162.5
Q ss_pred EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 199 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 199 EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
.|. +++..+++.+.|+++++||+.+.+++.++..+ .+..+.+| ||.+|++.... -.++||++++|+...+
T Consensus 87 ~~~-~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~~~~~~~~--- 159 (321)
T 3ow8_A 87 DIS-HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVESGKKEYS--- 159 (321)
T ss_dssp EEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETTTCSEEEE---
T ss_pred EEC-CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcCCCceeEE---
Confidence 443 56788999999999999999999999998755 78889999 88888887543 3589999999999988
Q ss_pred ccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC
Q 015220 276 LLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR 349 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~ 349 (411)
+-.|...|..+..++++-+|. ..+..|+|||+.+++... +.-+|...+..+..+ ++++|+ .|++|++||++
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH---TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE---EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 557888999999998876554 568899999999999887 666788888777765 788888 78999999999
Q ss_pred -CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 350 -GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 350 -Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++++.++.+|.. .+..+..+|||.+|+|++.|. +|+|||+.+|+|+
T Consensus 237 ~~~~~~~~~~h~~-----~v~~~~~sp~~~~l~s~s~D~----------~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 237 HANLAGTLSGHAS-----WVLNVAFCPDDTHFVSSSSDK----------SVKVWDVGTRTCV 283 (321)
T ss_dssp TCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------CEEEEETTTTEEE
T ss_pred CcceeEEEcCCCC-----ceEEEEECCCCCEEEEEeCCC----------cEEEEeCCCCEEE
Confidence 999999999998 799999999999999999997 9999999999986
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.87 E-value=9.6e-21 Score=178.54 Aligned_cols=189 Identities=13% Similarity=0.097 Sum_probs=149.2
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec----c--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS----D--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs----~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
+.|.. ++++ +..+.|++++|||+.+.+.+..+. + ..|..+.+| ||.+|+...... -|+||++++|+++
T Consensus 88 ~~~s~-d~~l-~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~---~i~iwd~~~~~~~ 162 (344)
T 4gqb_B 88 LTWVG-ERGI-LVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI---CIKVWDLAQQVVL 162 (344)
T ss_dssp EEEET-TTEE-EEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEE
T ss_pred EEEeC-CCeE-EEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEE
Confidence 45654 5655 466789999999999987654433 3 379999999 899888876554 4899999999999
Q ss_pred eEeeeccccCCcceeeeeecce--eE-EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCe
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEK--LL-VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRT 342 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ek--ll-IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~t 342 (411)
++ +-+|+.+|..+..+++. +| -.+.+..|+|||+++++....- ....+...+..++.+ ++|+++ .|++
T Consensus 163 ~~---~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~ 238 (344)
T 4gqb_B 163 SS---YRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGT 238 (344)
T ss_dssp EE---ECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC-C----CCCEEEEEECSSCTTEEEEEETTSE
T ss_pred EE---EcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee-ecceeeccceeeeecCCCCcceEEeccCCc
Confidence 99 67999999999998765 33 3567899999999999877621 112233445566543 678888 7899
Q ss_pred EEEEecC-CceeeeeccccccCCCCccceEEEcCCC-CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 343 VAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 343 I~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq-d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|++||++ |+++.+|.+|.. .++.+..+||| .+|+|||.|. +|+|||+.+|+++
T Consensus 239 v~~wd~~~~~~~~~~~~h~~-----~v~~v~fsp~g~~~lasgs~D~----------~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 239 VSLVDTKSTSCVLSSAVHSQ-----CVTGLVFSPHSVPFLASLSEDC----------SLAVLDSSLSELF 293 (344)
T ss_dssp EEEEESCC--CCEEEECCSS-----CEEEEEECSSSSCCEEEEETTS----------CEEEECTTCCEEE
T ss_pred EEEEECCCCcEEEEEcCCCC-----CEEEEEEccCCCeEEEEEeCCC----------eEEEEECCCCcEE
Confidence 9999999 999999999998 89999999998 5899999997 9999999999975
No 9
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.87 E-value=8.8e-20 Score=166.00 Aligned_cols=281 Identities=9% Similarity=0.038 Sum_probs=198.3
Q ss_pred ccceEEEeeccceehhhhccccceeeeccccc------EEEEEeCCCCceEEEEEeecC----C---CeEEEEEeEecCC
Q 015220 95 RSKIIEIVAARDIVFALAQSGVCAAFCRETNQ------RICFLNVTADEVIRSLFYNKN----N---DSLITVSVYASDN 161 (411)
Q Consensus 95 RS~V~EIv~a~dii~~L~~sG~c~af~~~t~~------~ic~lN~s~~evIrsifyN~~----n---~slI~vSv~~sd~ 161 (411)
..+|.-+-...+++++-...|...+||..+++ .+..+. .+..-|.++-++.. . +-|++.| .|.
T Consensus 16 ~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s~~---~dg 91 (397)
T 1sq9_A 16 DADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVATTS---FSG 91 (397)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEEEE---TTS
T ss_pred hcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEEEc---CCC
Confidence 34555555556777777888999999999988 555565 45566888888887 4 4444432 222
Q ss_pred CceeeeEeeehhhhhhCCCCCCCcceeeccc------CCCCeEEeeC---CCCeE-EEeecCCCeEEEEEeeC------c
Q 015220 162 FSSLRCRSTRIEYIRRGKPDAGFALFESESL------KWPGFVEFDD---VNGKV-LTYSAQDSIYKVFDLKN------Y 225 (411)
Q Consensus 162 ~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l------~~PgfvEFDd---~NGki-Lt~~~~ds~ykVWdL~~------Y 225 (411)
.++...+. .++.....++..-... ...--+.|.. ++|.. |+....|+.++|||+.+ .
T Consensus 92 --~i~iw~~~-----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 --DLLFYRIT-----REDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp --CEEEEEEE-----ECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred --CEEEEEcc-----CCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 33333322 2221010001111111 2233467773 57888 99999999999999999 6
Q ss_pred eEEE-----Eec---------cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeecccc---CCcceeee
Q 015220 226 TMLY-----SIS---------DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR---NKKVDFIE 287 (411)
Q Consensus 226 s~iy-----sLs---------~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h---~K~I~FLE 287 (411)
+.+. ++. ...|..+.++ +| +|++.... -.|+||++.+++++.++...-+| ..+|..+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN---GTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 240 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT---SEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC---CcEEEEECCCCceeEEEeccccccccCCccceEE
Confidence 6655 663 4489999999 67 66665432 35999999999999985532237 89999999
Q ss_pred eecceeEEe--ecC---ceeeEEEcccceEEEeeccccC-------------CCceEEEEeec---eeEEEE-ecCeEEE
Q 015220 288 QFNEKLLVK--QEN---ENLQILDVRNFELTEVSRTEFM-------------TPSAFIFLYEN---QLFLTF-RNRTVAV 345 (411)
Q Consensus 288 ~~~ekllIK--Qe~---~~LkI~dL~t~e~~~v~~T~f~-------------hpsAfifLy~s---qlFlSf-sd~tI~i 345 (411)
.++++.++. ..+ ..|++||+.+++... +... |...+..+..+ ++++++ .|++|++
T Consensus 241 ~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 317 (397)
T 1sq9_A 241 FSPQGSLLAIAHDSNSFGCITLYETEFGERIG---SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 317 (397)
T ss_dssp ECSSTTEEEEEEEETTEEEEEEEETTTCCEEE---EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCcccc---eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEE
Confidence 987765444 455 789999999998877 4444 78888888875 677777 7999999
Q ss_pred EecC-Cceeeeec------cc---------------cccCCCCccceEEEcCCC----------CEEEEEecCCCCCccc
Q 015220 346 WNFR-GELVTSFE------DH---------------LLWHPDCNTNNIYITSDQ----------DLIISYCKADSDDPLA 393 (411)
Q Consensus 346 Wn~~-Gel~~s~e------~H---------------~~~~~~c~~n~i~Is~Dq----------d~iiS~~~d~~~~~~~ 393 (411)
||++ |+++.++. +| .. .++.+..+||| ++|++++.|.
T Consensus 318 wd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg------ 386 (397)
T 1sq9_A 318 WDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP-----GVFDVKFLKKGWRSGMGADLNESLCCVCLDR------ 386 (397)
T ss_dssp EETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSC-----CEEEEEEECTTTSBSTTCTTSCEEEEEETTT------
T ss_pred EEcCCCceeEEEecccCcccchhhhhccccccccccCC-----ceeEEEeccccccccccccccceEEEecCCC------
Confidence 9998 99999999 77 44 89999999999 7999999997
Q ss_pred cCCceEEEeeeccee
Q 015220 394 EGNGKLFVSLLMFVT 408 (411)
Q Consensus 394 ~~~gtI~i~~i~tGk 408 (411)
+|+|||+.+||
T Consensus 387 ----~i~iw~~~~g~ 397 (397)
T 1sq9_A 387 ----SIRWFREAGGK 397 (397)
T ss_dssp ----EEEEEEEEC--
T ss_pred ----cEEEEEcCCCC
Confidence 99999999997
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.87 E-value=3.2e-20 Score=168.30 Aligned_cols=189 Identities=12% Similarity=0.112 Sum_probs=155.7
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+.|. ++|..|++.+.|++++|||+.+.+++.++..+ .|..++++ +|.+|++.... -.|+||++++|+.+.+
T Consensus 19 ~~fs-p~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~~~~~~~~-- 92 (304)
T 2ynn_A 19 IDFH-PTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGEKVVD-- 92 (304)
T ss_dssp EEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCCEEEE--
T ss_pred EEEC-CCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECCCCcEEEE--
Confidence 4554 57889999999999999999999999988854 79999999 88888877654 3589999999999998
Q ss_pred eccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEEe
Q 015220 275 HLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWN 347 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn 347 (411)
+-+|+.+|..++.++++-++ .+.+..+++||+.++.... .+..+|...+.+++.+ ++|+|+ .|++|++||
T Consensus 93 -~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd 169 (304)
T 2ynn_A 93 -FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALE--QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWS 169 (304)
T ss_dssp -EECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEE--EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEE
T ss_pred -EeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchh--hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 56899999999999887544 5578899999999984332 2667899999998865 578888 899999999
Q ss_pred cC-Cceeeeecc-ccccCCCCccceEEEcC--CCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 348 FR-GELVTSFED-HLLWHPDCNTNNIYITS--DQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 348 ~~-Gel~~s~e~-H~~~~~~c~~n~i~Is~--Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++ +.+..++.. |.. .++.+..+| |+.+|+||+.|. +|+|||+.+|+|+
T Consensus 170 ~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~s~s~D~----------~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 170 LGQSTPNFTLTTGQER-----GVNYVDYYPLPDKPYMITASDDL----------TIKIWDYQTKSCV 221 (304)
T ss_dssp TTCSSCSEEEECCCTT-----CEEEEEECCSTTCCEEEEEETTS----------EEEEEETTTTEEE
T ss_pred CCCCCccceeccCCcC-----cEEEEEEEEcCCCCEEEEEcCCC----------eEEEEeCCCCccc
Confidence 98 776666554 333 567777765 888999999997 9999999999985
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.87 E-value=3.6e-20 Score=170.50 Aligned_cols=191 Identities=12% Similarity=0.092 Sum_probs=161.9
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEe-Ee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLK-SF 273 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~-t~ 273 (411)
+.|. ++|+.|++.+.|++++|||+.+.+.+.++..+ .|..+.++ +|.+|+..... --++||++.+++... ..
T Consensus 61 ~~~s-~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~~~~~~~~~~ 136 (340)
T 1got_B 61 MHWG-TDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLKTREGNVRVS 136 (340)
T ss_dssp EEEC-TTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTCSBSCEEE
T ss_pred EEEC-CCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECccCCCcceeE
Confidence 3453 58899999999999999999999999888755 79999999 88888877643 358999999875211 11
Q ss_pred eeccccCCcceeeeeeccee-EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEec
Q 015220 274 NHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNF 348 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~ 348 (411)
..+.+|...|..+..++++. +....+..|++||+.+++... +..+|...+..+..+ ++++|+ .|++|++||+
T Consensus 137 ~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~---~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 137 RELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT---TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp EEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEE---EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 23668999999888877665 556788999999999999887 777899999998876 678888 7999999999
Q ss_pred C-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 349 R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 349 ~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+ |.++.+|.+|.. .++.+..+|||.+|+||+.|. +|+|||+.+++++
T Consensus 214 ~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~d~----------~v~iwd~~~~~~~ 261 (340)
T 1got_B 214 REGMCRQTFTGHES-----DINAICFFPNGNAFATGSDDA----------TCRLFDLRADQEL 261 (340)
T ss_dssp TTCSEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------CEEEEETTTTEEE
T ss_pred CCCeeEEEEcCCcC-----CEEEEEEcCCCCEEEEEcCCC----------cEEEEECCCCcEE
Confidence 9 999999999988 899999999999999999997 9999999998764
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.86 E-value=1.4e-19 Score=169.47 Aligned_cols=282 Identities=11% Similarity=0.144 Sum_probs=200.5
Q ss_pred ccceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 95 RSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 95 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
..+|.-+-.. ..+++.-..-|....||..+++.+..+...... |.++-|+.....|++.| .+ -.|+.-++
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~-v~~~~~s~~g~~las~~----~d---~~v~iw~~ 137 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW-VMECAFAPNGQSVACGG----LD---SACSIFNL 137 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT-CCCCEECTTSSEEEECC----SS---SCCEEEEC
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC-EEEEEECCCCCEEEEee----CC---CcEEEEEC
Confidence 3456655554 346777778899999999999998888765444 56777777776665532 22 12333322
Q ss_pred hhh--hhCCCCCCCcceeecccCCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec-----cC--ceeEEE
Q 015220 173 EYI--RRGKPDAGFALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-----DK--NVQEIK 240 (411)
Q Consensus 173 ~~i--~~gk~~~~~~LF~~~~l~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-----~~--~VqeIk 240 (411)
+.. ..+. .++ ....-.|.++ +.|...++..|++++.|+++++||+++.+.+..+. ++ .|..+.
T Consensus 138 ~~~~~~~~~----~~~-~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 138 SSQADRDGN----MPV-SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp CCCSSCCCS----STT-CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred CCCccccCC----ccc-eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 211 1111 111 1111233443 34555567778889999999999999999988772 22 788888
Q ss_pred Ee--CCEEEEEEecCCCceeeEEEEec-CCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEe
Q 015220 241 IS--PGIMLLIFTKASGHVPLKILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEV 315 (411)
Q Consensus 241 IS--dG~~Lai~q~t~~~ipiKIl~I~-tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v 315 (411)
++ ++.+|+...... .|+|||+. +++.+.+ +-+|..+|..+..++++.++. +.+..|+|||+++++...+
T Consensus 213 ~~~~~~~~l~sgs~D~---~v~~wd~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 213 INSLNANMFISGSCDT---TVRLWDLRITSRAVRT---YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp ECSSSCCEEEEEETTS---CEEEEETTTTCCCCEE---ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred eecCCCCEEEEEECCC---eEEEEECCCCCcceEE---ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 86 677777765543 58999998 5677777 668999999999999875444 5778999999999998873
Q ss_pred ecccc----CCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeee----ccccccCCCCccceEEEcCCCCEEEE
Q 015220 316 SRTEF----MTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSF----EDHLLWHPDCNTNNIYITSDQDLIIS 382 (411)
Q Consensus 316 ~~T~f----~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~----e~H~~~~~~c~~n~i~Is~Dqd~iiS 382 (411)
-.... .+...+..++.+ ++++++ .|++|.+||.. |+.+.++ .+|.. .++.+..||||++|+|
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-----~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEG-----RISCLGLSSDGSALCT 361 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCC-----CCCEEEECSSSSEEEE
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCC-----ceEEEEECCCCCEEEE
Confidence 22211 111224455544 778888 89999999998 9988888 67887 7999999999999999
Q ss_pred EecCCCCCccccCCceEEEeeecceeee
Q 015220 383 YCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 383 ~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
||.|. +|+|||+..++-+
T Consensus 362 gs~D~----------~i~iW~~~~~~~i 379 (380)
T 3iz6_a 362 GSWDK----------NLKIWAFSGHRKI 379 (380)
T ss_dssp ECTTS----------CEEEEECCSSSSC
T ss_pred eeCCC----------CEEEEecCCCccc
Confidence 99997 9999999887643
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.86 E-value=1.3e-19 Score=166.53 Aligned_cols=185 Identities=14% Similarity=0.188 Sum_probs=153.3
Q ss_pred eCCCCeEEEeecCCCeEEEEEeeC-------ceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 201 DDVNGKVLTYSAQDSIYKVFDLKN-------YTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 201 Dd~NGkiLt~~~~ds~ykVWdL~~-------Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
...+|+.|++++.|++++|||+.+ ..++..+.++ .|..+.++ +|.+|+....- -.|+||++++|+.+
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D---~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD---KTLRLWDLRTGTTY 111 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT---SEEEEEETTSSCEE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC---CcEEEEECCCCcEE
Confidence 345899999999999999999975 3466777765 79999999 78888776543 35999999999999
Q ss_pred eEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-------------eeE
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-------------QLF 335 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-------------qlF 335 (411)
++ +.+|+.+|..+..++++. +....+..|++||+....... ......|..++.++..+ ++|
T Consensus 112 ~~---~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 112 KR---FVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFS-SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp EE---EECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEE-CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred EE---EcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceee-eecccCCCceeeeeeeccccccccccCCCCCEE
Confidence 98 668999999999998764 445678999999998544433 23334688888888765 467
Q ss_pred EEE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 336 LTF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 336 lSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+++ .|++|++||.++.+..++.+|.. .++.+.++|||++|+||+.|. +|+|||+.+.
T Consensus 188 ~s~~~d~~i~iwd~~~~~~~~~~~h~~-----~v~~~~~s~~g~~l~sgs~dg----------~v~iwd~~~~ 245 (343)
T 2xzm_R 188 ASVGWDGRLKVWNTNFQIRYTFKAHES-----NVNHLSISPNGKYIATGGKDK----------KLLIWDILNL 245 (343)
T ss_dssp EEEETTSEEEEEETTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETTC----------EEEEEESSCC
T ss_pred EEEcCCCEEEEEcCCCceeEEEcCccc-----cceEEEECCCCCEEEEEcCCC----------eEEEEECCCC
Confidence 888 89999999988999999999988 899999999999999999997 9999999543
No 14
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.86 E-value=4e-18 Score=150.95 Aligned_cols=276 Identities=8% Similarity=0.079 Sum_probs=185.8
Q ss_pred ceEEEeec---cceehhhhccccceeeeccccc-----EEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeE
Q 015220 97 KIIEIVAA---RDIVFALAQSGVCAAFCRETNQ-----RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCR 168 (411)
Q Consensus 97 ~V~EIv~a---~dii~~L~~sG~c~af~~~t~~-----~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr 168 (411)
.|..|-+. .++++--..-|....||..+++ ....+ ..+...|.++-++....-|++.| .|. .++..
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~---~d~--~i~~~ 113 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGS---WDG--TLRLW 113 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEE---TTS--EEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEc---ccc--cceEE
Confidence 45554443 2455555666888889876543 22233 34567799999998777666543 232 22222
Q ss_pred eeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEecc--CceeEEEEe-C-
Q 015220 169 STRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD--KNVQEIKIS-P- 243 (411)
Q Consensus 169 ~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs~--~~VqeIkIS-d- 243 (411)
.. ..+...........+.......+++..|++.+.|+.+++||+...... ..+.. +.|..++++ +
T Consensus 114 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 183 (340)
T 4aow_A 114 DL----------TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 183 (340)
T ss_dssp ET----------TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS
T ss_pred ee----------cccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC
Confidence 11 112223333333344455556778888999999999999999886654 33332 378888888 2
Q ss_pred -CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeecccc
Q 015220 244 -GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEF 320 (411)
Q Consensus 244 -G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f 320 (411)
+.+++.... . -.|++|++.+++++.+ +.+|+.+|..+..++++-++. ..+..|++||+.+++... +.
T Consensus 184 ~~~~~~s~~~-d--~~i~i~d~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~---~~- 253 (340)
T 4aow_A 184 SNPIIVSCGW-D--KLVKVWNLANCKLKTN---HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY---TL- 253 (340)
T ss_dssp SSCEEEEEET-T--SCEEEEETTTTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE---EE-
T ss_pred CCcEEEEEcC-C--CEEEEEECCCCceeeE---ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee---ee-
Confidence 334443322 2 2489999999999998 678999999999998866554 577899999999998876 22
Q ss_pred CCCceEEEEeec--eeEEEE-ecCeEEEEecC-Cceeeeecccccc----CCCCccceEEEcCCCCEEEEEecCCCCCcc
Q 015220 321 MTPSAFIFLYEN--QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLW----HPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (411)
Q Consensus 321 ~hpsAfifLy~s--qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~----~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~ 392 (411)
.+...+..+..+ ..+++. .|++|++||++ +.++.++..+... .....++.+..+|||++|+||+.|.
T Consensus 254 ~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg----- 328 (340)
T 4aow_A 254 DGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN----- 328 (340)
T ss_dssp ECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS-----
T ss_pred cCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC-----
Confidence 244556665554 445555 99999999999 6666676644322 1122788999999999999999997
Q ss_pred ccCCceEEEeeeccee
Q 015220 393 AEGNGKLFVSLLMFVT 408 (411)
Q Consensus 393 ~~~~gtI~i~~i~tGk 408 (411)
+|+|||+.||+
T Consensus 329 -----~v~iW~~~tGt 339 (340)
T 4aow_A 329 -----LVRVWQVTIGT 339 (340)
T ss_dssp -----CEEEEEEEC--
T ss_pred -----EEEEEeCCCcC
Confidence 99999999996
No 15
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.85 E-value=2e-19 Score=160.94 Aligned_cols=189 Identities=18% Similarity=0.206 Sum_probs=159.6
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+.|. ++|+.|++.+.|++++|||+.+.+.+..+..+ .|..+..+ +|.+|++.... -.|+||++++|+.+.+
T Consensus 29 ~~~s-~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~-- 102 (312)
T 4ery_A 29 VKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVSSGKCLKT-- 102 (312)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEE--
T ss_pred EEEC-CCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECCCCcEEEE--
Confidence 4665 58899999999999999999999999999866 79999999 88888877543 3589999999999998
Q ss_pred eccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEec
Q 015220 275 HLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNF 348 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~ 348 (411)
+-+|..+|..+..+++.-++ ...+..|++||+.+++... +...|...+..+..+ ++++++ .|++|++||+
T Consensus 103 -~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 103 -LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK---TLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp -EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred -EcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE---EecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 56899999999998876544 4578899999999999877 666788888887765 677887 7999999999
Q ss_pred C-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 349 R-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 349 ~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+ |+.+.++..+.. ..+..+..+|||+.|++++.|. +|++||+.+|+++
T Consensus 179 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~d~----------~i~iwd~~~~~~~ 227 (312)
T 4ery_A 179 ASGQCLKTLIDDDN----PPVSFVKFSPNGKYILAATLDN----------TLKLWDYSKGKCL 227 (312)
T ss_dssp TTCCEEEEECCSSC----CCEEEEEECTTSSEEEEEETTT----------EEEEEETTTTEEE
T ss_pred CCCceeeEEeccCC----CceEEEEECCCCCEEEEEcCCC----------eEEEEECCCCcEE
Confidence 9 888887654322 3688899999999999999987 9999999999875
No 16
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.6e-18 Score=149.01 Aligned_cols=269 Identities=14% Similarity=0.203 Sum_probs=197.2
Q ss_pred cceEEEeec-cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 015220 96 SKIIEIVAA-RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (411)
Q Consensus 96 S~V~EIv~a-~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 174 (411)
.+|.-+... ...++.-...|....||..+++....+... ...|.++-++...+.|++.+ .|. ..+...+..
T Consensus 19 ~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~---~dg----~i~~~~~~~ 90 (313)
T 3odt_A 19 QDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEKELLLFGG---KDT----MINGVPLFA 90 (313)
T ss_dssp SCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTTTEEEEEE---TTS----CEEEEETTC
T ss_pred CCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCCCEEEEec---CCC----eEEEEEeee
Confidence 344444332 457777788899999999999888877755 56788998898777666643 222 223333333
Q ss_pred hhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe--CCEEE
Q 015220 175 IRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS--PGIML 247 (411)
Q Consensus 175 i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS--dG~~L 247 (411)
...++. +..- -.|.+ -+.| ++..|+....|+++++|| +.+.+..+..+ .|..+..+ ++.+|
T Consensus 91 ~~~~~~-----~~~~--~~~~~~i~~~~~---~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 91 TSGEDP-----LYTL--IGHQGNVCSLSF---QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp CTTSCC------CEE--CCCSSCEEEEEE---ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred cCCCCc-----ccch--hhcccCEEEEEe---cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 222221 1111 11222 2455 467889999999999999 77777777644 88888876 57777
Q ss_pred EEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee-EEeecCceeeEEEcccceEEEeeccccCCCceE
Q 015220 248 LIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVRNFELTEVSRTEFMTPSAF 326 (411)
Q Consensus 248 ai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAf 326 (411)
++..... .|++|+ +++.+..+. ..|..+|..+..++++. +....+..|++||+.+++... +...|...+
T Consensus 159 ~~~~~d~---~i~i~d--~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~i 228 (313)
T 3odt_A 159 LTASADK---TIKLWQ--NDKVIKTFS--GIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLR---TYEGHESFV 228 (313)
T ss_dssp EEEETTS---CEEEEE--TTEEEEEEC--SSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE---EEECCSSCE
T ss_pred EEEECCC---CEEEEe--cCceEEEEe--ccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhh---hhhcCCceE
Confidence 7765443 489999 677777633 23889999999988765 556688899999999999887 666788888
Q ss_pred EEEeec--eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEe
Q 015220 327 IFLYEN--QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVS 402 (411)
Q Consensus 327 ifLy~s--qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~ 402 (411)
..+..+ ..++++ .|++|++||++ |+++.++..|.. .+..+..+||++ +++++.|. +|.||
T Consensus 229 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~i~~~~~~~~~~-~~~~~~dg----------~i~iw 292 (313)
T 3odt_A 229 YCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAI-----SIWSVDCMSNGD-IIVGSSDN----------LVRIF 292 (313)
T ss_dssp EEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSS-----CEEEEEECTTSC-EEEEETTS----------CEEEE
T ss_pred EEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCc-----eEEEEEEccCCC-EEEEeCCC----------cEEEE
Confidence 888876 346666 89999999998 999999999987 799999999999 55688776 99999
Q ss_pred eecceeee
Q 015220 403 LLMFVTCK 410 (411)
Q Consensus 403 ~i~tGk~~ 410 (411)
|+.+|+++
T Consensus 293 ~~~~~~~~ 300 (313)
T 3odt_A 293 SQEKSRWA 300 (313)
T ss_dssp ESCGGGCC
T ss_pred eCCCCcee
Confidence 99999864
No 17
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.1e-18 Score=162.69 Aligned_cols=262 Identities=14% Similarity=0.115 Sum_probs=193.0
Q ss_pred eecccccEEEEEeCCCCceEEEEEeec-CCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeE
Q 015220 120 FCRETNQRICFLNVTADEVIRSLFYNK-NNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFV 198 (411)
Q Consensus 120 f~~~t~~~ic~lN~s~~evIrsifyN~-~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgfv 198 (411)
++ .+|+.+..+...+...|.+|=++. ..+-|++.| .|. ..+.-+++....+........+. --...--+
T Consensus 48 w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s---~dg----~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~ 117 (437)
T 3gre_A 48 GN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGS---DQG----VIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQI 117 (437)
T ss_dssp GG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEE---TTS----EEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEE
T ss_pred cc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEec---CCc----eEEEeECcccccCcccceeeecc--CCCCEEEE
Confidence 54 678999999888888999999998 666665544 333 34444455544454222111111 11112245
Q ss_pred EeeCCCCeEEEeecCCCeEEEEEee---CceEEEEeccCceeEEEEe-----------------CCEEEEEEecCCCcee
Q 015220 199 EFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDKNVQEIKIS-----------------PGIMLLIFTKASGHVP 258 (411)
Q Consensus 199 EFDd~NGkiLt~~~~ds~ykVWdL~---~Ys~iysLs~~~VqeIkIS-----------------dG~~Lai~q~t~~~ip 258 (411)
.|. ++|..|+..+.|++++|||+. +.+.+..+..+.|..+.++ +|.+|++.... -.
T Consensus 118 ~~~-~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---~~ 193 (437)
T 3gre_A 118 TMI-PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNL---SR 193 (437)
T ss_dssp EEC-TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETT---SE
T ss_pred EEe-CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCC---Ce
Confidence 777 589999999999999999995 6667776666666666655 37777776654 36
Q ss_pred eEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccc-cCCCceEEEEeec---
Q 015220 259 LKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTE-FMTPSAFIFLYEN--- 332 (411)
Q Consensus 259 iKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~-f~hpsAfifLy~s--- 332 (411)
|+||++.+++++.++.. ..|..+|..+..++++. +....+..|+|||+++++... +. +.|...+..+...
T Consensus 194 i~iwd~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 194 VIIFDIRTLERLQIIEN-SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIR---SWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp EEEEETTTCCEEEEEEC-CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEE---EEBCTTCEEEEEEEECTTT
T ss_pred EEEEeCCCCeeeEEEcc-CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEE---EEecCCCCceEEEEecccc
Confidence 89999999999999542 12789999999987764 455688899999999999887 43 3677888888332
Q ss_pred ----eeEEEE-ecCeEEEEecC-Cceeeeecccc------ccCCC---------------CccceEEEcCCCCEEEEEec
Q 015220 333 ----QLFLTF-RNRTVAVWNFR-GELVTSFEDHL------LWHPD---------------CNTNNIYITSDQDLIISYCK 385 (411)
Q Consensus 333 ----qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~------~~~~~---------------c~~n~i~Is~Dqd~iiS~~~ 385 (411)
++++++ .|++|++||++ |+.+.++.+|. .|.|+ -.+..+..+ |+++|+||+.
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~ 348 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA 348 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC
Confidence 478888 88999999999 99999999885 33332 237888999 8899999999
Q ss_pred CCCCCccccCCceEEEeeecceeee
Q 015220 386 ADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 386 d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|. +|.+||+.+|+++
T Consensus 349 d~----------~i~~wd~~~~~~~ 363 (437)
T 3gre_A 349 TS----------SIVMFSLNELSSS 363 (437)
T ss_dssp GT----------EEEEEETTCGGGC
T ss_pred CC----------eEEEEECCCcccc
Confidence 97 9999999999864
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.85 E-value=2.5e-19 Score=164.00 Aligned_cols=189 Identities=13% Similarity=0.242 Sum_probs=154.8
Q ss_pred EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 199 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 199 EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
.| .++|+.|++.+.|+++||||+++.+++.++.++ .|..+.++ +|.+|+....-. .|+||++. |+.+.+
T Consensus 72 ~~-s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~---~i~vwd~~-~~~~~~--- 143 (319)
T 3frx_A 72 TL-TADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDK---TIKVWTIK-GQCLAT--- 143 (319)
T ss_dssp EE-CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTS---CEEEEETT-SCEEEE---
T ss_pred EE-CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCC---eEEEEECC-CCeEEE---
Confidence 34 368999999999999999999999999999865 89999999 788887766543 58999996 667777
Q ss_pred ccccCCcceeeeeecc--------eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeE
Q 015220 276 LLHRNKKVDFIEQFNE--------KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTV 343 (411)
Q Consensus 276 LL~h~K~I~FLE~~~e--------kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI 343 (411)
+.+|...|..+...+. .++-...+..|++||+.+++... +..+|...+..++.+ ++++|+ .|++|
T Consensus 144 ~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~---~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i 220 (319)
T 3frx_A 144 LLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA---DFIGHNSNINTLTASPDGTLIASAGKDGEI 220 (319)
T ss_dssp ECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE---EECCCCSCEEEEEECTTSSEEEEEETTCEE
T ss_pred EeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe---eecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 7899999999988874 45667789999999999998876 777899999999886 678888 78999
Q ss_pred EEEecC-Cceeeeeccccc-----cCC--------------------------------------CCccceEEEcCCCCE
Q 015220 344 AVWNFR-GELVTSFEDHLL-----WHP--------------------------------------DCNTNNIYITSDQDL 379 (411)
Q Consensus 344 ~iWn~~-Gel~~s~e~H~~-----~~~--------------------------------------~c~~n~i~Is~Dqd~ 379 (411)
++||++ +.++.++..|.. |+| ...+..++.||||++
T Consensus 221 ~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 300 (319)
T 3frx_A 221 MLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQT 300 (319)
T ss_dssp EEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSE
T ss_pred EEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCE
Confidence 999999 877777765421 111 223457889999999
Q ss_pred EEEEecCCCCCccccCCceEEEeeeccee
Q 015220 380 IISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 380 iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
|+||+.|. +|+|||+.|++
T Consensus 301 l~sg~~Dg----------~i~vWd~~t~~ 319 (319)
T 3frx_A 301 LFAGYTDN----------VIRVWQVMTAN 319 (319)
T ss_dssp EEEEETTS----------CEEEEEEEEC-
T ss_pred EEEeecCc----------eEEEEEEeecC
Confidence 99999987 99999999974
No 19
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.85 E-value=1.6e-19 Score=160.42 Aligned_cols=280 Identities=12% Similarity=0.169 Sum_probs=199.0
Q ss_pred ccceEEEeec------cceehhhhccccceeeecccccEEEEEeC----CCCceEEEEEeecCCC---eEEEEEeEecCC
Q 015220 95 RSKIIEIVAA------RDIVFALAQSGVCAAFCRETNQRICFLNV----TADEVIRSLFYNKNND---SLITVSVYASDN 161 (411)
Q Consensus 95 RS~V~EIv~a------~dii~~L~~sG~c~af~~~t~~~ic~lN~----s~~evIrsifyN~~n~---slI~vSv~~sd~ 161 (411)
..+|.-|-+. +..+++-...|....||..+++.+..+.. ..++-|.++-++...+ .++.+ ...|.
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~--~~~dg 95 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV--AGSRG 95 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE--EETTC
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE--ecCCC
Confidence 3455555554 45677778888899999998988776654 3557788988888754 34442 12232
Q ss_pred CceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEe---c--c
Q 015220 162 FSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---S--D 233 (411)
Q Consensus 162 ~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysL---s--~ 233 (411)
.++.- ++..++ ++..-. .|.+ -+.|...+|..|+..+.|++++|||+++.+.+..+ . .
T Consensus 96 --~i~v~-----d~~~~~-----~~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 161 (366)
T 3k26_A 96 --IIRII-----NPITMQ-----CIKHYV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHR 161 (366)
T ss_dssp --EEEEE-----CTTTCC-----EEEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCS
T ss_pred --EEEEE-----Echhce-----Eeeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccccc
Confidence 22222 222222 222111 2333 45687779999999999999999999999999998 3 3
Q ss_pred CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee-------------------------eccccCCcceeee
Q 015220 234 KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN-------------------------HLLHRNKKVDFIE 287 (411)
Q Consensus 234 ~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~-------------------------~LL~h~K~I~FLE 287 (411)
..|..+.++ +|.+|++.... -.|+||++.+++.+..+. .+.+|..+|..+.
T Consensus 162 ~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 162 DEVLSADYDLLGEKIMSCGMD---HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SCEEEEEECTTSSEEEEEETT---SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred CceeEEEECCCCCEEEEecCC---CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 399999999 77777776543 368999999998776522 1223889999999
Q ss_pred eecceeEEeecCceeeEEEcccceEE-----------EeeccccCCCceEEEEee-----ceeEEEE-ecCeEEEEecC-
Q 015220 288 QFNEKLLVKQENENLQILDVRNFELT-----------EVSRTEFMTPSAFIFLYE-----NQLFLTF-RNRTVAVWNFR- 349 (411)
Q Consensus 288 ~~~ekllIKQe~~~LkI~dL~t~e~~-----------~v~~T~f~hpsAfifLy~-----sqlFlSf-sd~tI~iWn~~- 349 (411)
..++.++....+..|++||+.+++.. ....+.-.|...+.++.. .++++++ .|++|++||++
T Consensus 239 ~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 239 WLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred EcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 99888888889999999999987541 111244445555444443 4677777 88999999999
Q ss_pred Cc----eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 350 GE----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 350 Ge----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
|+ ++.++.+|.. ...++.+..+|||++|++++.|. +|.|||+.|
T Consensus 319 ~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~dg----------~i~iwd~~~ 366 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKC---GAAIRQTSFSRDSSILIAVCDDA----------SIWRWDRLR 366 (366)
T ss_dssp SSGGGCEEEEECCTTC---CSCEEEEEECTTSSEEEEEETTS----------EEEEEEC--
T ss_pred CCCccccceEEccccc---CCceEEEEeCCCCCeEEEEeCCC----------EEEEEEecC
Confidence 66 4448888831 12899999999999999999997 999999875
No 20
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.85 E-value=2.2e-18 Score=160.75 Aligned_cols=263 Identities=12% Similarity=0.148 Sum_probs=190.3
Q ss_pred ceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 185 (411)
..++.-..-|....||..+++....+.. +...|.++-|+.....+++.+ .|+ .|+.-+... ++. .+..
T Consensus 77 ~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~~lasg~---~d~----~i~v~~~~~---~~~-~~~~ 144 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGCAIACGG---LDN----KCSVYPLTF---DKN-ENMA 144 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSSEEEEES---TTS----EEEEEECCC---CTT-CCSG
T ss_pred CEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCCEEEEee---CCC----CEEEEEEec---ccc-cccc
Confidence 3566667789999999999988877765 344577888888776665532 222 233332211 110 0100
Q ss_pred ceeecccCCCCeE---EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe---CCEEEEEEecCCCce
Q 015220 186 LFESESLKWPGFV---EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS---PGIMLLIFTKASGHV 257 (411)
Q Consensus 186 LF~~~~l~~Pgfv---EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS---dG~~Lai~q~t~~~i 257 (411)
-.....-.|.+.| .|. +++..|+..+.|+++++||+++.+++.++..+ .|..+.++ +|.+|+......
T Consensus 145 ~~~~~~~~h~~~v~~~~~~-~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg--- 220 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFT-NSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK--- 220 (354)
T ss_dssp GGCEEEEECSSCEEEEEEC-SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS---
T ss_pred ccceeeeccCCcEEEEEEe-CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC---
Confidence 0011112345544 454 46677778889999999999999999999865 78888887 467777775443
Q ss_pred eeEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---
Q 015220 258 PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN--- 332 (411)
Q Consensus 258 piKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s--- 332 (411)
-+++|++.+|+.+.+ +-+|..+|..+..++++- .....+..+++||+++++...+-.. -.+...+..+..+
T Consensus 221 ~v~~wd~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-~~~~~~~~~~~~s~~g 296 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQA---FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK-ESIIFGASSVDFSLSG 296 (354)
T ss_dssp CEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECTTS
T ss_pred eEEEEECCCCcEEEE---ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCcccceeEEEEeCCC
Confidence 589999999999998 568999999999987765 4455788999999999876653211 1122344455544
Q ss_pred eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 333 QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 333 qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
++++++ .|++|++||+. |+++.++.+|.. .+..+..||||++|+||+.|. +|+||+
T Consensus 297 ~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~-----~v~~l~~spdg~~l~sgs~D~----------~v~vW~ 354 (354)
T 2pbi_B 297 RLLFAGYNDYTINVWDVLKGSRVSILFGHEN-----RVSTLRVSPDGTAFCSGSWDH----------TLRVWA 354 (354)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEECCCSS-----CEEEEEECTTSSCEEEEETTS----------EEEEEC
T ss_pred CEEEEEECCCcEEEEECCCCceEEEEECCCC-----cEEEEEECCCCCEEEEEcCCC----------CEEecC
Confidence 677777 78899999997 999999999998 899999999999999999997 999996
No 21
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.85 E-value=1.4e-19 Score=182.34 Aligned_cols=197 Identities=13% Similarity=0.119 Sum_probs=168.8
Q ss_pred CCCCeE---EeeCCCCeEEEeecCCCeEEEEEeeCc-----eEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEE
Q 015220 193 KWPGFV---EFDDVNGKVLTYSAQDSIYKVFDLKNY-----TMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKI 261 (411)
Q Consensus 193 ~~Pgfv---EFDd~NGkiLt~~~~ds~ykVWdL~~Y-----s~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKI 261 (411)
.|.+.| .|...++.+|++++.|++++|||+.+. .....+.+| .|..+.+| ||.+|++..... -|+|
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg---~v~v 456 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG---ELRL 456 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS---EEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC---cEEE
Confidence 577755 577778899999999999999999863 345667755 79999999 899888876543 5899
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----ee
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----QL 334 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----ql 334 (411)
|++.+|+.+++ +.+|..+|..+..++++- +-.+.+..|+|||+.......+.....+|...+.++..+ ..
T Consensus 457 wd~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 457 WDLAAGVSTRR---FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EETTTTEEEEE---EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EECCCCcceeE---EeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999999998 679999999999998765 445678999999998887777777777899999998875 36
Q ss_pred EEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 335 FLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 335 FlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|+ .|++|++||++ +.++.++.+|.. .++.+.++|||++|+|||.|. +|+|||+.+|+++
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~-----~v~~v~~spdg~~l~sg~~Dg----------~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTG-----YVSTVAVSPDGSLCASGGKDG----------VVLLWDLAEGKKL 596 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------BCEEEETTTTEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCC-----CEEEEEEeCCCCEEEEEeCCC----------eEEEEECCCCceE
Confidence 7888 79999999999 889999999998 899999999999999999997 9999999999875
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.85 E-value=1.9e-18 Score=162.45 Aligned_cols=261 Identities=13% Similarity=0.117 Sum_probs=191.9
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
.++++.-...|.-.+||..+++.+..+. .+...|.++-++..+ .|++.| .|. .+ +.-+ +..|+
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~~-~l~s~s---~dg--~i--~vwd---~~~~~----- 194 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGG-ILVSGS---TDR--TV--RVWD---IKKGC----- 194 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECSTT-EEEEEE---TTS--CE--EEEE---TTTTE-----
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEe-CCCcCEEEEEEcCCC-EEEEEe---CCC--CE--EEEE---CCCCc-----
Confidence 5677778888999999999999999887 566678888887655 333322 222 22 2222 22221
Q ss_pred cceeecccCCCCe---EEeeC-CCCeEEEeecCCCeEEEEEeeCceE-----------------------EEEeccCcee
Q 015220 185 ALFESESLKWPGF---VEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM-----------------------LYSISDKNVQ 237 (411)
Q Consensus 185 ~LF~~~~l~~Pgf---vEFDd-~NGkiLt~~~~ds~ykVWdL~~Ys~-----------------------iysLs~~~Vq 237 (411)
++.. .-.|.+- +.|.. ++|..|+.+..|++++|||+.+.+. +..+.++...
T Consensus 195 ~~~~--~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (464)
T 3v7d_B 195 CTHV--FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 272 (464)
T ss_dssp EEEE--ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSC
T ss_pred EEEE--ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccce
Confidence 1111 0123433 35654 7889999999999999999998763 3445545322
Q ss_pred EEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEE
Q 015220 238 EIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTE 314 (411)
Q Consensus 238 eIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~ 314 (411)
-..++ +|.+|++..... .|+||++.+++.+.+ +-+|..+|..+..++++ ++....+..|++||+.+++...
T Consensus 273 v~~~~~~~~~l~~~~~d~---~i~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 273 VRTVSGHGNIVVSGSYDN---TLIVWDVAQMKCLYI---LSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp EEEEEEETTEEEEEETTS---CEEEEETTTTEEEEE---ECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEeCCC---eEEEEECCCCcEEEE---ecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 23334 555666665433 499999999999998 56899999999999874 4666678899999999999887
Q ss_pred eeccccCCCceEEEEeec-eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCc
Q 015220 315 VSRTEFMTPSAFIFLYEN-QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDP 391 (411)
Q Consensus 315 v~~T~f~hpsAfifLy~s-qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~ 391 (411)
+.-+|+..+.++..+ +.++++ .|++|++||++ +.....+. |.. ....+.+++|++++++|+ |.
T Consensus 347 ---~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~l~~~~-dg---- 412 (464)
T 3v7d_B 347 ---TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH-HTN-----LSAITTFYVSDNILVSGS-EN---- 412 (464)
T ss_dssp ---EECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE-CTT-----CCCEEEEEECSSEEEEEE-TT----
T ss_pred ---EEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec-CCC-----CccEEEEEeCCCEEEEec-CC----
Confidence 777899999998877 667777 88999999999 66555542 333 577889999999999998 65
Q ss_pred cccCCceEEEeeecceeee
Q 015220 392 LAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 392 ~~~~~gtI~i~~i~tGk~~ 410 (411)
+|+|||+.+|+++
T Consensus 413 ------~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 413 ------QFNIYNLRSGKLV 425 (464)
T ss_dssp ------EEEEEETTTCCEE
T ss_pred ------eEEEEECCCCcEE
Confidence 9999999999986
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.85 E-value=1.7e-18 Score=162.91 Aligned_cols=260 Identities=13% Similarity=0.155 Sum_probs=189.6
Q ss_pred hccccceeeecccccEEEEEeCCC-----------------CceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 015220 112 AQSGVCAAFCRETNQRICFLNVTA-----------------DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (411)
Q Consensus 112 ~~sG~c~af~~~t~~~ic~lN~s~-----------------~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 174 (411)
...+....|+..+|+.+..+.... +..|+++-++....-|++.| .|. .+ +.-+
T Consensus 82 g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~---~d~--~i--~iwd--- 151 (393)
T 1erj_A 82 GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA---EDR--LI--RIWD--- 151 (393)
T ss_dssp ECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE---TTS--CE--EEEE---
T ss_pred EcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEc---CCC--eE--EEEE---
Confidence 345778899999999888875422 22489999998776665533 222 22 2222
Q ss_pred hhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe--CCEEEE
Q 015220 175 IRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS--PGIMLL 248 (411)
Q Consensus 175 i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS--dG~~La 248 (411)
+..++ .+.. .-.|.+ -+.|. ++|+.|++.+.|+++++||+++.+++.++..+ .|..+.++ +|.+|+
T Consensus 152 ~~~~~-----~~~~--~~~h~~~v~~~~~~-p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 152 IENRK-----IVMI--LQGHEQDIYSLDYF-PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp TTTTE-----EEEE--ECCCSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEE
T ss_pred CCCCc-----EEEE--EccCCCCEEEEEEc-CCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEE
Confidence 22211 1111 112333 24554 57888999999999999999999998888755 89999998 688888
Q ss_pred EEecCCCceeeEEEEecCCcEEeEee----eccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEE--------
Q 015220 249 IFTKASGHVPLKILSIEDGTVLKSFN----HLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTE-------- 314 (411)
Q Consensus 249 i~q~t~~~ipiKIl~I~tG~~L~t~~----~LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~-------- 314 (411)
+..... .|+||++.+|+.+..+. ...+|..+|..+..++++.+| ...+..|++||+.+.+...
T Consensus 224 ~~s~d~---~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 224 AGSLDR---AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEETTS---CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEcCCC---cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 776543 48999999999988753 225789999999999887544 4468899999998754321
Q ss_pred -eeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcC------CCCEEEE
Q 015220 315 -VSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS------DQDLIIS 382 (411)
Q Consensus 315 -v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~------Dqd~iiS 382 (411)
...+..+|...+..++.+ +.++|+ .|++|.+||.+ |+++.++.+|.. .+..+.+++ |+.+|+|
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~-----~v~~v~~~~~~~~~p~~~~l~s 375 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-----SVISVAVANGSSLGPEYNVFAT 375 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSCTTCTTCEEEEE
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC-----CEEEEEecCCcCcCCCCCEEEE
Confidence 122666888888888876 678888 78999999999 999999999998 788898876 7999999
Q ss_pred EecCCCCCccccCCceEEEeeecce
Q 015220 383 YCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 383 ~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
|+.|. +|+|||+.+.
T Consensus 376 gs~Dg----------~i~iW~~~~~ 390 (393)
T 1erj_A 376 GSGDC----------KARIWKYKKI 390 (393)
T ss_dssp EETTS----------EEEEEEEEEC
T ss_pred ECCCC----------cEEECccccc
Confidence 99997 9999999764
No 24
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.85 E-value=1.9e-18 Score=165.96 Aligned_cols=267 Identities=13% Similarity=0.201 Sum_probs=198.3
Q ss_pred ccceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 95 RSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 95 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
...|..+.+. ...++.....|....|+. +++.+..+. ++..-|.++-++.....+++.| .|. .++.-..+-
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~---~d~--~i~~w~~~~ 334 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLT-GHSSSVWGVAFSPDGQTIASAS---DDK--TVKLWNRNG 334 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC-CCSSCEEEEEECTTSSEEEEEE---TTS--CEEEEETTS
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEe-cCCCCeEEEEECCCCCEEEEEe---CCC--eEEEEeCCC
Confidence 3455555544 335666677788888884 567666654 4556678888888777776643 222 222211110
Q ss_pred hhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEE
Q 015220 173 EYIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIM 246 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~ 246 (411)
+.++. + -.|++ -+.| .++|+.|+....+++++|||. +.+++.++..+ .|..+.+| ||.+
T Consensus 335 ~~~~~---------~----~~~~~~v~~~~~-s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~ 399 (577)
T 2ymu_A 335 QHLQT---------L----TGHSSSVWGVAF-SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT 399 (577)
T ss_dssp CEEEE---------E----CCCSSCEEEEEE-CTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred CeeEE---------E----eCCCCCEEEEEE-CCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCE
Confidence 01100 0 01111 2344 368999999999999999995 56788888754 89999999 8888
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEEeeccccCCCc
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPS 324 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~v~~T~f~hps 324 (411)
|++..... -|+||+ .+|+.+.+ +-+|..+|..+..+++..++ ..++..|++||+ +++... ++.+|+.
T Consensus 400 l~~~~~d~---~v~~~~-~~~~~~~~---~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~---~~~~~~~ 468 (577)
T 2ymu_A 400 IASASDDK---TVKLWN-RNGQLLQT---LTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQ---TLTGHSS 468 (577)
T ss_dssp EEEEETTS---EEEEEC-TTCCEEEE---EECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEE---EEECCSS
T ss_pred EEEEeCCC---EEEEEe-CCCCEEEE---ecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEE---EEcCCCC
Confidence 88775443 589999 57899888 66899999999999876544 467889999996 666665 7778999
Q ss_pred eEEEEeec---eeEEEE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEE
Q 015220 325 AFIFLYEN---QLFLTF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLF 400 (411)
Q Consensus 325 AfifLy~s---qlFlSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~ 400 (411)
.+..++.+ +++++. .|++|++||..|+++.+|++|.. .++.++.||||++|+|++.|. +|+
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~-----~v~~l~~s~dg~~l~s~~~dg----------~v~ 533 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS-----SVRGVAFSPDGQTIASASDDK----------TVK 533 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSS-----CEEEEEECTTSSCEEEEETTS----------EEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEeCCCC-----CEEEEEEcCCCCEEEEEECcC----------EEE
Confidence 99998876 778887 78999999999999999999988 899999999999999999987 999
Q ss_pred Eeeecceeee
Q 015220 401 VSLLMFVTCK 410 (411)
Q Consensus 401 i~~i~tGk~~ 410 (411)
||| .+|+++
T Consensus 534 lwd-~~~~~~ 542 (577)
T 2ymu_A 534 LWN-RNGQLL 542 (577)
T ss_dssp EEC-TTSCEE
T ss_pred EEe-CCCCEE
Confidence 999 478764
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.85 E-value=3.9e-20 Score=173.26 Aligned_cols=190 Identities=12% Similarity=0.074 Sum_probs=157.6
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEe----Eeee
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLK----SFNH 275 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~----t~~~ 275 (411)
++|+.|++.+.|++++|||+.+.+.+.++..+ .|..+.++ +|.+|+.... ---++||++.++.... ....
T Consensus 76 p~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~---d~~v~iw~~~~~~~~~~~~~~~~~ 152 (380)
T 3iz6_a 76 PEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGL---DSACSIFNLSSQADRDGNMPVSRV 152 (380)
T ss_dssp TTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCS---SSCCEEEECCCCSSCCCSSTTCCB
T ss_pred CCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeC---CCcEEEEECCCCccccCCccceee
Confidence 47888999999999999999999999888865 89999999 8888887653 3468999998654211 1112
Q ss_pred ccccCCcceeeeeecc---eeEEeecCceeeEEEcccceEEEeecc--ccCCCceEEEEeec----eeEEEE-ecCeEEE
Q 015220 276 LLHRNKKVDFIEQFNE---KLLVKQENENLQILDVRNFELTEVSRT--EFMTPSAFIFLYEN----QLFLTF-RNRTVAV 345 (411)
Q Consensus 276 LL~h~K~I~FLE~~~e---kllIKQe~~~LkI~dL~t~e~~~v~~T--~f~hpsAfifLy~s----qlFlSf-sd~tI~i 345 (411)
+-+|+..|..+..+++ .++-.+.+..|++||+.+++...+-.. ..+|...+..+..+ ++|+|+ .|++|++
T Consensus 153 ~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~ 232 (380)
T 3iz6_a 153 LTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232 (380)
T ss_dssp CCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEE
T ss_pred ccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEE
Confidence 6689998888887764 367778999999999999998874322 25688888888764 689999 7999999
Q ss_pred EecC--CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 346 WNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 346 Wn~~--Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
||++ +..+.++.+|.. .++.+..+|||+.|+|||.|. +|+|||+.+|+++
T Consensus 233 wd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~----------~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 233 WDLRITSRAVRTYHGHEG-----DINSVKFFPDGQRFGTGSDDG----------TCRLFDMRTGHQL 284 (380)
T ss_dssp EETTTTCCCCEEECCCSS-----CCCEEEECTTSSEEEEECSSS----------CEEEEETTTTEEE
T ss_pred EECCCCCcceEEECCcCC-----CeEEEEEecCCCeEEEEcCCC----------eEEEEECCCCcEE
Confidence 9997 578999999999 899999999999999999997 9999999999875
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.85 E-value=4e-19 Score=167.48 Aligned_cols=184 Identities=11% Similarity=0.092 Sum_probs=145.5
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CC-EEEEEEecCCCceeeEEEEecCCcEEeEeeeccc
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PG-IMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
++|+.|++.+.|++++|||+++.+++.++..+ .|..+.++ +| .+|+....-+ -|+|||+.+|+.+.++.. -+
T Consensus 137 pdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~---~v~iwd~~~~~~~~~~~~-~~ 212 (344)
T 4gqb_B 137 SSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN---RILLWDTRCPKPASQIGC-SA 212 (344)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS---CEEEEETTSSSCEEECC----
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccc---ccccccccccceeeeeec-ce
Confidence 47889999999999999999999999999965 89999998 55 3555543322 489999999999998542 34
Q ss_pred cCCcceeeeeecc-e-eE-EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-
Q 015220 279 RNKKVDFIEQFNE-K-LL-VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR- 349 (411)
Q Consensus 279 h~K~I~FLE~~~e-k-ll-IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~- 349 (411)
+...+..+..+++ . ++ ...++..|+|||+++++... ++-+|..++..++.+ ++++|+ .|++|+|||.+
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~---~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL---SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE---EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE---EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 5556777888763 3 33 34678999999999999887 788899999999875 568888 78999999999
Q ss_pred CceeeeeccccccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 350 GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 350 Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
|+++ .+.+|.. .++.+..|||++ +++|++.|. +|++|++.+..+
T Consensus 290 ~~~~-~~~~H~~-----~V~~v~~sp~~~~llas~s~D~----------~v~~w~v~~~~~ 334 (344)
T 4gqb_B 290 SELF-RSQAHRD-----FVRDATWSPLNHSLLTTVGWDH----------QVVHHVVPTEPL 334 (344)
T ss_dssp CEEE-EECCCSS-----CEEEEEECSSSTTEEEEEETTS----------CEEEEECCC---
T ss_pred CcEE-EEcCCCC-----CEEEEEEeCCCCeEEEEEcCCC----------eEEEEECCCCCC
Confidence 7765 5789998 799999999986 677999997 999999988764
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.85 E-value=1.2e-18 Score=167.43 Aligned_cols=260 Identities=14% Similarity=0.223 Sum_probs=193.6
Q ss_pred cceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 96 SKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 96 S~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
..|..+.+. ...++.-...|....||..+.+ +-.+ ..+..-|.++-++.....|++.+ .|. .++....
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-~~~~-~~~~~~v~~~~~s~~g~~l~~~~---~dg--~v~~~~~--- 373 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-LQTL-TGHSSSVWGVAFSPDGQTIASAS---DDK--TVKLWNR--- 373 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCE-EEEE-CCCSSCEEEEEECTTSSEEEEEE---TTS--EEEEEET---
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe-eEEE-eCCCCCEEEEEECCCCCEEEEEe---CCC--EEEEEcC---
Confidence 445555444 3456666677888888865433 3333 34556778888888777766533 222 2322211
Q ss_pred hhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEE
Q 015220 174 YIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIML 247 (411)
Q Consensus 174 ~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~L 247 (411)
.|+ +..+. ..|++ -+.|. ++|+.|+....|++++|||. +.+++.++..+ .|..+.+| |+.+|
T Consensus 374 ---~~~------~~~~~-~~~~~~v~~~~~s-~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 374 ---NGQ------LLQTL-TGHSSSVRGVAFS-PDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp ---TCC------EEEEE-ECCSSCEEEEEEC-TTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred ---CCC------EEEEe-cCCCCCeEEEEEC-CCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEE
Confidence 111 11111 11222 34564 68899999999999999995 67888888765 89999999 88888
Q ss_pred EEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeeccccCCCce
Q 015220 248 LIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSA 325 (411)
Q Consensus 248 ai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsA 325 (411)
++..... .++||++ +|+.+.+ +.+|..+|..+..++++-+|+ .++..|+|||. +++... +..+|...
T Consensus 442 ~~~~~d~---~v~~w~~-~~~~~~~---~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~---~~~~h~~~ 510 (577)
T 2ymu_A 442 ASASDDK---TVKLWNR-NGQLLQT---LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ---TLTGHSSS 510 (577)
T ss_dssp EEEETTS---EEEEEET-TSCEEEE---EECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEE---EEECCSSC
T ss_pred EEEcCCC---EEEEEEC-CCCEEEE---EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEE---EEeCCCCC
Confidence 8765443 4899995 7888888 668999999999999876555 57889999995 777776 77789999
Q ss_pred EEEEeec---eeEEEE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEE
Q 015220 326 FIFLYEN---QLFLTF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFV 401 (411)
Q Consensus 326 fifLy~s---qlFlSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i 401 (411)
+..++.+ ++++|. .|++|++||..|+++.+|.+|.. .+..+..||||++|+|++.|. +|.+
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~-----~v~~~~fs~dg~~l~s~~~D~----------~i~~ 575 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSS-----SVWGVAFSPDGQTIASASSDK----------TVKL 575 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSS-----CEEEEEECTTSSCEEEEETTS----------CEEE
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCC----------EEEE
Confidence 9999876 677777 78999999999999999999998 899999999999999999997 9999
Q ss_pred ee
Q 015220 402 SL 403 (411)
Q Consensus 402 ~~ 403 (411)
||
T Consensus 576 Wd 577 (577)
T 2ymu_A 576 WN 577 (577)
T ss_dssp EC
T ss_pred eC
Confidence 98
No 28
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.84 E-value=7.3e-19 Score=152.66 Aligned_cols=190 Identities=15% Similarity=0.127 Sum_probs=153.3
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCc----eEEEEeccC--ceeEEEEeC---CEEEEEEecCCCceeeEEEEecCC-
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSISDK--NVQEIKISP---GIMLLIFTKASGHVPLKILSIEDG- 267 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Y----s~iysLs~~--~VqeIkISd---G~~Lai~q~t~~~ipiKIl~I~tG- 267 (411)
+.|+ ++|+.|+.++.|++++|||+.+. +++..+..+ .|..+..++ |.+|++..... .|+||++.+|
T Consensus 17 ~~~~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg---~v~vwd~~~~~ 92 (351)
T 3f3f_A 17 VVYD-FYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK---TVKLWEEDPDQ 92 (351)
T ss_dssp EEEC-SSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS---CEEEEEECTTS
T ss_pred EEEc-CCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC---eEEEEecCCCc
Confidence 4565 48999999999999999999976 466666644 899999995 88888876543 5899999998
Q ss_pred --------cEEeEeeeccccCCcceeeeeecc----eeEEeecCceeeEEEcccceEEE---------------------
Q 015220 268 --------TVLKSFNHLLHRNKKVDFIEQFNE----KLLVKQENENLQILDVRNFELTE--------------------- 314 (411)
Q Consensus 268 --------~~L~t~~~LL~h~K~I~FLE~~~e----kllIKQe~~~LkI~dL~t~e~~~--------------------- 314 (411)
+.+.+ +.+|..+|..+..+++ .++....+..|++||+.+++...
T Consensus 93 ~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (351)
T 3f3f_A 93 EECSGRRWNKLCT---LNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS 169 (351)
T ss_dssp CTTSSCSEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC
T ss_pred ccccccCcceeee---ecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc
Confidence 44555 6689999999999986 35666788999999998765211
Q ss_pred ------------------------------------eeccccCCCceEEEEeec-------eeEEEE-ecCeEEEEecC-
Q 015220 315 ------------------------------------VSRTEFMTPSAFIFLYEN-------QLFLTF-RNRTVAVWNFR- 349 (411)
Q Consensus 315 ------------------------------------v~~T~f~hpsAfifLy~s-------qlFlSf-sd~tI~iWn~~- 349 (411)
.-.+.-+|+..+..++.+ ++++|+ .|++|++||++
T Consensus 170 ~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred eeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 122444688888887755 468888 78999999998
Q ss_pred C----------------------------------------------ceeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 350 G----------------------------------------------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 350 G----------------------------------------------el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
+ +++.++.+|.. .++.+..+|||++|+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 250 KLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNG-----EVWSVSWNLTGTILSSA 324 (351)
T ss_dssp CC---------------------------------------CCSEEEEEEEEECTTSS-----CEEEEEECSSSCCEEEE
T ss_pred CcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccc-----cEEEEEEcCCCCEEEEe
Confidence 4 78889999988 89999999999999999
Q ss_pred ecCCCCCccccCCceEEEeeecceee
Q 015220 384 CKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 384 ~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+.|. +|+|||+.+|+.
T Consensus 325 ~~dg----------~v~iw~~~~~~~ 340 (351)
T 3f3f_A 325 GDDG----------KVRLWKATYSNE 340 (351)
T ss_dssp ETTS----------CEEEEEECTTSC
T ss_pred cCCC----------cEEEEecCcCcc
Confidence 9997 999999999854
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.84 E-value=1.4e-19 Score=170.22 Aligned_cols=189 Identities=14% Similarity=0.210 Sum_probs=155.3
Q ss_pred EEeeCCCCeEEE--eecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEe
Q 015220 198 VEFDDVNGKVLT--YSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 198 vEFDd~NGkiLt--~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~ 273 (411)
|-|- +||+.|+ ++..|+++||||+++.++++++.++ +|..+.+| ||.+|+..... .+.+|+..+|+.+...
T Consensus 139 v~fS-pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~----~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 139 VYIS-REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS----SLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEC-TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS----CEEEEETTTCCEEEEE
T ss_pred EEEc-CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce----eEEEEEeccCcceeee
Confidence 4553 5787653 5557999999999999999999865 89999999 89988887532 4789999999988764
Q ss_pred eeccccCCcceeeeeecceeEEee--cCc----eeeEEEcccceEEE-eeccccCCCceEEEEeec---eeEEEE-ecCe
Q 015220 274 NHLLHRNKKVDFIEQFNEKLLVKQ--ENE----NLQILDVRNFELTE-VSRTEFMTPSAFIFLYEN---QLFLTF-RNRT 342 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ekllIKQ--e~~----~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~s---qlFlSf-sd~t 342 (411)
. +.+|...|..+..++++.++.. .+. .+++||+..+.... ...+..+|..++.+++.+ ++++++ .|++
T Consensus 214 ~-~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 214 T-DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp C-CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred e-cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 3 5678889999999998775544 223 68999999877544 234667789999999987 778888 7899
Q ss_pred EEEEecC-Cceeee-eccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 343 VAVWNFR-GELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 343 I~iWn~~-Gel~~s-~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
|+|||.+ |+++.+ +++|.. .++.|+.||||++|+|||.|. ||+||||.++
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~-----~V~~v~fSpdg~~laS~S~D~----------tvrvw~ip~~ 344 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSF-----AITEVTISPDSTYVASVSAAN----------TIHIIKLPLN 344 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSS-----CEEEEEECTTSCEEEEEETTS----------EEEEEECCTT
T ss_pred EEEEECCCCcEEEEecCcccC-----CEEEEEECCCCCEEEEEeCCC----------eEEEEEcCCC
Confidence 9999998 999987 589999 899999999999999999998 9999999643
No 30
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.84 E-value=4.3e-18 Score=159.21 Aligned_cols=260 Identities=10% Similarity=0.074 Sum_probs=194.8
Q ss_pred ceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 185 (411)
+.+++.+..|....||..+++....+...+...|.++-++...+-|++.+ .|. .++.- ++..++ .
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~---~dg--~i~iw-----d~~~~~-----~ 168 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGL---GNG--LVDIY-----DVESQT-----K 168 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEE---TTS--CEEEE-----ETTTCC-----E
T ss_pred CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEEC---CCC--eEEEE-----ECcCCe-----E
Confidence 44666778899999999999999999988889999999999666555533 222 22222 122221 1
Q ss_pred ceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEee-CceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCcee
Q 015220 186 LFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVP 258 (411)
Q Consensus 186 LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~-~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ip 258 (411)
+..- -.|.+ -+.| ++..|+.+..|+++++||++ ..+.+..+..+ .|..+.++ +|.+|++..... .
T Consensus 169 ~~~~--~~~~~~v~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~ 240 (401)
T 4aez_A 169 LRTM--AGHQARVGCLSW---NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN---V 240 (401)
T ss_dssp EEEE--CCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS---C
T ss_pred EEEe--cCCCCceEEEEE---CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC---e
Confidence 1111 02222 2344 56899999999999999999 46667777654 89999999 888888876543 5
Q ss_pred eEEEEecCCcEEeEeeeccccCCcceeeeeecce-eEEee----cCceeeEEEcccceEEEeeccccCCCceEEEEeec-
Q 015220 259 LKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK-LLVKQ----ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN- 332 (411)
Q Consensus 259 iKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek-llIKQ----e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s- 332 (411)
|+||++.+++.+.+ +.+|..+|..+..++++ .++.. .+..|++||+.+++... +. .++..+..+..+
T Consensus 241 v~iwd~~~~~~~~~---~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~---~~-~~~~~v~~~~~s~ 313 (401)
T 4aez_A 241 VQIWDARSSIPKFT---KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN---TV-DAGSQVTSLIWSP 313 (401)
T ss_dssp EEEEETTCSSEEEE---ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE---EE-ECSSCEEEEEECS
T ss_pred EEEccCCCCCccEE---ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE---EE-eCCCcEEEEEECC
Confidence 89999999999998 56899999999999843 34443 48999999999999886 22 366777777765
Q ss_pred --eeEEE--E-ecCeEEEEecC-Cceee--eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeee
Q 015220 333 --QLFLT--F-RNRTVAVWNFR-GELVT--SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 333 --qlFlS--f-sd~tI~iWn~~-Gel~~--s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
+.+++ + .|++|.+|+++ |++.. .+.+|.. .+..+..+|||.+|++++.|. +|.+||+
T Consensus 314 ~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~-----~v~~~~~s~dg~~l~s~~~dg----------~i~iw~~ 378 (401)
T 4aez_A 314 HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT-----RVLYSALSPDGRILSTAASDE----------NLKFWRV 378 (401)
T ss_dssp SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS-----CCCEEEECTTSSEEEEECTTS----------EEEEEEC
T ss_pred CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC-----CEEEEEECCCCCEEEEEeCCC----------cEEEEEC
Confidence 45555 3 69999999999 65554 5778988 899999999999999999987 9999999
Q ss_pred cceeee
Q 015220 405 MFVTCK 410 (411)
Q Consensus 405 ~tGk~~ 410 (411)
.+|+++
T Consensus 379 ~~~~~~ 384 (401)
T 4aez_A 379 YDGDHV 384 (401)
T ss_dssp CC----
T ss_pred CCCccc
Confidence 999875
No 31
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=2.8e-18 Score=161.73 Aligned_cols=262 Identities=12% Similarity=0.137 Sum_probs=193.9
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
.+.++.-...|...+||..+++.+..+.. +..-|.++-++ ++.+++.| .|. .++.-. +..|+
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~~l~s~~---~dg--~i~vwd-----~~~~~----- 190 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DNIIISGS---TDR--TLKVWN-----AETGE----- 190 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TTEEEEEE---TTS--CEEEEE-----TTTTE-----
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CCEEEEEe---CCC--eEEEEE-----CCcCc-----
Confidence 56777788899999999999999888874 45566777776 34444422 222 222222 12221
Q ss_pred cceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEeCCEEEEEEecCCCceeeEEE
Q 015220 185 ALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKISPGIMLLIFTKASGHVPLKIL 262 (411)
Q Consensus 185 ~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkISdG~~Lai~q~t~~~ipiKIl 262 (411)
++.. .-.|.+-|.-=..++..++.++.|++++|||+.+.+++.++..+ .|..+.. +|..|++.... -.|++|
T Consensus 191 ~~~~--~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d---g~i~iw 264 (445)
T 2ovr_B 191 CIHT--LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-DGRRVVSGAYD---FMVKVW 264 (445)
T ss_dssp EEEE--ECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-CSSCEEEEETT---SCEEEE
T ss_pred EEEE--ECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-CCCEEEEEcCC---CEEEEE
Confidence 1111 01233333222224667889999999999999999999998865 7777777 66666666543 358999
Q ss_pred EecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-eeEEEE-ec
Q 015220 263 SIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTF-RN 340 (411)
Q Consensus 263 ~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-qlFlSf-sd 340 (411)
++.+++++++ +-+|..+|..+...+..++....+..|++||+.+++... +..+|...+..+..+ +.++++ .|
T Consensus 265 d~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~v~~~~~~~~~l~~~~~d 338 (445)
T 2ovr_B 265 DPETETCLHT---LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIH---TLTGHQSLTSGMELKDNILVSGNAD 338 (445)
T ss_dssp EGGGTEEEEE---ECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEE---EECCCCSCEEEEEEETTEEEEEETT
T ss_pred ECCCCcEeEE---ecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEE---EEcCCcccEEEEEEeCCEEEEEeCC
Confidence 9999999999 558899999999977788888999999999999999887 777788888777765 667777 79
Q ss_pred CeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 341 RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 341 ~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|++||++ |+++.++.+|.. ....+..+.. |+++|++|+.|. +|+|||+.+|+++
T Consensus 339 g~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~s~~~dg----------~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQGPNK--HQSAVTCLQF--NKNFVITSSDDG----------TVKLWDLKTGEFI 395 (445)
T ss_dssp SCEEEEETTTCCEEEEECSTTS--CSSCEEEEEE--CSSEEEEEETTS----------EEEEEETTTCCEE
T ss_pred CeEEEEECCCCcEEEEEccCCC--CCCCEEEEEE--CCCEEEEEeCCC----------eEEEEECCCCcee
Confidence 999999998 999999998432 1115666655 689999999986 9999999999875
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.84 E-value=4.5e-19 Score=166.00 Aligned_cols=245 Identities=13% Similarity=0.107 Sum_probs=168.3
Q ss_pred CCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEee
Q 015220 135 ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYS 211 (411)
Q Consensus 135 ~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~ 211 (411)
++.-|.++=|+....-|.+.| ++...+-=.++.+=....|.+.. -+......|.+ -+.|.. +|+.|+.
T Consensus 41 H~~~V~~v~fSpDG~~las~s----~d~~~~wd~~v~~~~~~~~~~~~---~~~~~~~~~~~~V~~~~~s~-d~~~l~~- 111 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAAS----SLSSRTWGGSIWVFKDPEGAPNE---SLCTAGVQTEAGVTDVAWVS-EKGILVA- 111 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEE----CSSSSSCCEEEEEESSCC---CG---GGCSEEEECSSCEEEEEEET-TTEEEEE-
T ss_pred ccCCEEEEEECCCCCEEEEEc----CCCCccccCeEEEEECCCCCcce---eEecccCCCCCCEEEEEEcC-CCCEEEE-
Confidence 667899999998777666644 22111100111111111222111 11111222332 245664 5777764
Q ss_pred cCCCeEEEEEeeCceEEEE----ecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcce
Q 015220 212 AQDSIYKVFDLKNYTMLYS----ISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVD 284 (411)
Q Consensus 212 ~~ds~ykVWdL~~Ys~iys----Ls~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~ 284 (411)
+.|++++|||+.+.+.+.. ..+ ..|..+.+| ||.+|+...... .|+||++++|+++.+ +-+|+.+|.
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg---~v~iwd~~~~~~~~~---~~~h~~~v~ 185 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF---SVKVWDLSQKAVLKS---YNAHSSEVN 185 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS---CEEEEETTTTEEEEE---ECCCSSCEE
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC---eEEEEECCCCcEEEE---EcCCCCCEE
Confidence 5689999999999876532 323 379999999 888888876544 389999999999999 568999999
Q ss_pred eeeeecce--e-EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-Cceeee
Q 015220 285 FIEQFNEK--L-LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR-GELVTS 355 (411)
Q Consensus 285 FLE~~~ek--l-lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~-Gel~~s 355 (411)
.++.++++ + +...++..|+|||+.+++..... +...+...+..++.+ ++|+++ .|++|++||++ |+++.+
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~ 264 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI-DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT 264 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC-CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeee-eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEE
Confidence 99998764 3 45567889999999999876521 333466777777754 678887 78999999999 999999
Q ss_pred eccccccCCCCccceEEEcCCC-CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 356 FEDHLLWHPDCNTNNIYITSDQ-DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 356 ~e~H~~~~~~c~~n~i~Is~Dq-d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.+|.. .++.+..|||+ .+|+|||.|. +|+|||+.+|+++
T Consensus 265 ~~~~~~-----~v~~l~~sp~~~~~lasgs~D~----------~i~iwd~~~~~~~ 305 (357)
T 4g56_B 265 SAVHSQ-----NITGLAYSYHSSPFLASISEDC----------TVAVLDADFSEVF 305 (357)
T ss_dssp ECCCSS-----CEEEEEECSSSSCCEEEEETTS----------CEEEECTTSCEEE
T ss_pred Eeccce-----eEEEEEEcCCCCCEEEEEeCCC----------EEEEEECCCCcEe
Confidence 999998 89999999998 6899999987 9999999999985
No 33
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=9.2e-19 Score=157.82 Aligned_cols=285 Identities=13% Similarity=0.099 Sum_probs=192.6
Q ss_pred cccceEEEeecc---ceehhhhccccceeeecccccEEEEEe------------CCCCceEEEEEeecCCCeEEEEEeEe
Q 015220 94 KRSKIIEIVAAR---DIVFALAQSGVCAAFCRETNQRICFLN------------VTADEVIRSLFYNKNNDSLITVSVYA 158 (411)
Q Consensus 94 ~RS~V~EIv~a~---dii~~L~~sG~c~af~~~t~~~ic~lN------------~s~~evIrsifyN~~n~slI~vSv~~ 158 (411)
-+.+|..+.... .+++.-...|....||..+++....+. ..+..-|.++-++..+..++.++ .
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~--~ 119 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS--S 119 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE--E
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE--e
Confidence 345666666543 677777889999999998887666554 24777889999988555444422 2
Q ss_pred cCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEee--CCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--
Q 015220 159 SDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFD--DVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-- 234 (411)
Q Consensus 159 sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFD--d~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-- 234 (411)
.|. .++.-. +..++ ++..-..-....-+.|. ..++..++....++.++|||+++.+++.++..+
T Consensus 120 ~d~--~i~iwd-----~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 187 (408)
T 4a11_B 120 FDK--TLKVWD-----TNTLQ-----TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ 187 (408)
T ss_dssp TTS--EEEEEE-----TTTTE-----EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS
T ss_pred CCC--eEEEee-----CCCCc-----cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC
Confidence 222 233322 22211 11111100111123333 347779999999999999999999999888854
Q ss_pred ceeEEEEe-CCE-EEEEEecCCCceeeEEEEecCCc-EEeEee------------eccccCCcceeeeeeccee--EEee
Q 015220 235 NVQEIKIS-PGI-MLLIFTKASGHVPLKILSIEDGT-VLKSFN------------HLLHRNKKVDFIEQFNEKL--LVKQ 297 (411)
Q Consensus 235 ~VqeIkIS-dG~-~Lai~q~t~~~ipiKIl~I~tG~-~L~t~~------------~LL~h~K~I~FLE~~~ekl--lIKQ 297 (411)
.|..+.++ +|. +|++..... .|+||++.+++ .+..+. ..-+|..+|..+..++++. +...
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADS---RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTS---CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCcEEEEEcCCC---cEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 89999999 554 455554333 48999999887 343321 1147889999999998864 5556
Q ss_pred cCceeeEEEcccceEEEeeccc--cC--CCceEEEE-e-eceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccce
Q 015220 298 ENENLQILDVRNFELTEVSRTE--FM--TPSAFIFL-Y-ENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNN 370 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~v~~T~--f~--hpsAfifL-y-~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~ 370 (411)
.+..|++||+.+++........ -. .+..+... . ...++++..+++|.+||+. |+++.++.+|.. .+..
T Consensus 265 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-----~v~~ 339 (408)
T 4a11_B 265 TDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYK-----TVDC 339 (408)
T ss_dssp TTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSS-----CEEE
T ss_pred CCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCC-----eEEE
Confidence 7889999999998875421100 00 11111111 1 2255555699999999999 999999999998 8999
Q ss_pred EEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 371 IYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 371 i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+..+|||.+|++++.|. +|.|||+.+++.+
T Consensus 340 ~~~s~~~~~l~s~~~dg----------~i~iw~~~~~~~~ 369 (408)
T 4a11_B 340 CVFQSNFQELYSGSRDC----------NILAWVPSLYEPV 369 (408)
T ss_dssp EEEETTTTEEEEEETTS----------CEEEEEECC----
T ss_pred EEEcCCCCEEEEECCCC----------eEEEEeCCCCCcc
Confidence 99999999999999997 9999999999864
No 34
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.84 E-value=1.4e-18 Score=154.35 Aligned_cols=277 Identities=10% Similarity=0.093 Sum_probs=194.7
Q ss_pred cceEEEeecc--ceehhhh-c---cccceeeecccccEEEEEeCCCCceEEEEEeecCC---CeEEEEEeEecCCCceee
Q 015220 96 SKIIEIVAAR--DIVFALA-Q---SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNN---DSLITVSVYASDNFSSLR 166 (411)
Q Consensus 96 S~V~EIv~a~--dii~~L~-~---sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n---~slI~vSv~~sd~~s~L~ 166 (411)
..|..+-... ..+++.. . .|....||..+++........+..-|.++-++..+ +-|++.+ .|. .++
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~---~dg--~i~ 93 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD---FGG--NLH 93 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE---TTS--CEE
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec---CCC--eEE
Confidence 3455555543 2333333 3 68999999999998877776777788999999874 4444422 232 222
Q ss_pred eEeeehhhhhhCCCCCCCcceeecccCCCCeE---Eee-----CCCCeEEEeecCCCeEEEEEeeCce-EEEEecc----
Q 015220 167 CRSTRIEYIRRGKPDAGFALFESESLKWPGFV---EFD-----DVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD---- 233 (411)
Q Consensus 167 cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgfv---EFD-----d~NGkiLt~~~~ds~ykVWdL~~Ys-~iysLs~---- 233 (411)
. - ++..++ .++.. .-.|.+.| .|. .++|+.|++++.|++++|||+++.+ ++.++..
T Consensus 94 i--w---d~~~~~----~~~~~--~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 94 I--W---NLEAPE----MPVYS--VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp E--E---CTTSCS----SCSEE--ECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred E--E---eCCCCC----ccEEE--EEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 2 2 222222 01111 11244433 332 4789999999999999999999987 6777752
Q ss_pred --CceeEEE----Ee-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeec-----ceeEEeecCce
Q 015220 234 --KNVQEIK----IS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN-----EKLLVKQENEN 301 (411)
Q Consensus 234 --~~VqeIk----IS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~-----ekllIKQe~~~ 301 (411)
..|..+. ++ +|.+|++.... -.|++|++.+++.... .+|..+|..+..++ +.++....+..
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 235 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDN---GDIKLFDLRNMALRWE----TNIKNGVCSLEFDRKDISMNKLVATSLEGK 235 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETT---SEEEEEETTTTEEEEE----EECSSCEEEEEESCSSSSCCEEEEEESTTE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccC---CeEEEEECccCceeee----cCCCCceEEEEcCCCCCCCCEEEEECCCCe
Confidence 1688887 45 78888777543 3699999999998654 56788999999986 45577778999
Q ss_pred eeEEEcccceEEEeec--cccCCCceEEEEeec---e-eEEEE-ecCeEEEEecC-C-------------------ceee
Q 015220 302 LQILDVRNFELTEVSR--TEFMTPSAFIFLYEN---Q-LFLTF-RNRTVAVWNFR-G-------------------ELVT 354 (411)
Q Consensus 302 LkI~dL~t~e~~~v~~--T~f~hpsAfifLy~s---q-lFlSf-sd~tI~iWn~~-G-------------------el~~ 354 (411)
|++||+.+++....-. +.-.|...+..+..+ + +++++ .|++|++||++ + +++.
T Consensus 236 i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 236 FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp EEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred EEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceee
Confidence 9999999976543110 222688888888866 3 78888 78999999998 3 4678
Q ss_pred eeccccccCCCCccceEEEcCCCCEEE-EEecCCCCCccccCCceEEEeeecceeee
Q 015220 355 SFEDHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 355 s~e~H~~~~~~c~~n~i~Is~Dqd~ii-S~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++.+|.. .+..+..+|||+.|+ |++.|. +|+|||+.+++++
T Consensus 316 ~~~~~~~-----~v~~~~~s~~~~~l~~s~~~d~----------~i~iw~~~~~~~i 357 (357)
T 3i2n_A 316 NVTLSTQ-----PISSLDWSPDKRGLCVCSSFDQ----------TVRVLIVTKLNKI 357 (357)
T ss_dssp EEECCSS-----CEEEEEECSSSTTEEEEEETTS----------EEEEEEECC----
T ss_pred ccccCCC-----CeeEEEEcCCCCeEEEEecCCC----------cEEEEECCCcccC
Confidence 8999987 899999999999998 899987 9999999998864
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.84 E-value=1.7e-17 Score=148.39 Aligned_cols=269 Identities=13% Similarity=0.172 Sum_probs=195.8
Q ss_pred ceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhh
Q 015220 97 KIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEY 174 (411)
Q Consensus 97 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~ 174 (411)
+|..+-.. ...++.-...|....|+..+++.+..+.. +..-|.++-++...+-|++.| .|. .++.- +
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~---~d~--~i~vw-----d 93 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSNLLVSAS---DDK--TLKIW-----D 93 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE---TTS--EEEEE-----E
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCCEEEEEC---CCC--EEEEE-----E
Confidence 44444443 34666777889999999999999888865 445578898988777666543 222 22222 2
Q ss_pred hhhCCCCCCCcceeecccCCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEE
Q 015220 175 IRRGKPDAGFALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLL 248 (411)
Q Consensus 175 i~~gk~~~~~~LF~~~~l~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~La 248 (411)
++.++ ++.. .-.|.+. +.|. ++|..|++++.|++++|||+++.+++..+..+ .|..+.++ +|.+|+
T Consensus 94 ~~~~~-----~~~~--~~~~~~~v~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 165 (312)
T 4ery_A 94 VSSGK-----CLKT--LKGHSNYVFCCNFN-PQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 165 (312)
T ss_dssp TTTCC-----EEEE--EECCSSCEEEEEEC-SSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred CCCCc-----EEEE--EcCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 22222 1111 0123333 3454 47888999999999999999999999999855 79999999 788777
Q ss_pred EEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceE
Q 015220 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAF 326 (411)
Q Consensus 249 i~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAf 326 (411)
+..... .|+||++.+++.+.++. .++..++.++..++++. +....+..|++||+.+++... +..+|....
T Consensus 166 ~~~~d~---~i~~wd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~ 237 (312)
T 4ery_A 166 SSSYDG---LCRIWDTASGQCLKTLI--DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK---TYTGHKNEK 237 (312)
T ss_dssp EEETTS---CEEEEETTTCCEEEEEC--CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE---EECSSCCSS
T ss_pred EEeCCC---cEEEEECCCCceeeEEe--ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE---EEEecCCce
Confidence 775443 58999999999998743 46778899999988754 555678999999999999877 444443321
Q ss_pred -----EEE-eeceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCce
Q 015220 327 -----IFL-YENQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGK 398 (411)
Q Consensus 327 -----ifL-y~sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gt 398 (411)
.+. ...+.++++ .|++|++||++ ++++.++.+|.. .+..++.+|++.+++|++.+. .|+
T Consensus 238 ~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~l~s~~~~~--------d~~ 304 (312)
T 4ery_A 238 YCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTD-----VVISTACHPTENIIASAALEN--------DKT 304 (312)
T ss_dssp SCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECSSSSEEEEEECTT--------TCC
T ss_pred EEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCC-----cEEEEeecCcCCceEEEEccC--------Ccc
Confidence 111 223667787 89999999999 999999999988 789999999999999998421 249
Q ss_pred EEEeeec
Q 015220 399 LFVSLLM 405 (411)
Q Consensus 399 I~i~~i~ 405 (411)
|+||+..
T Consensus 305 i~~W~~d 311 (312)
T 4ery_A 305 IKLWKSD 311 (312)
T ss_dssp EEEEECC
T ss_pred EEEecCC
Confidence 9999863
No 36
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.83 E-value=4.9e-18 Score=169.83 Aligned_cols=272 Identities=9% Similarity=0.089 Sum_probs=197.2
Q ss_pred cceehhhhccccceeeecccccEEE--EEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRIC--FLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDA 182 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic--~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~ 182 (411)
..+|+.-...|....||..+++..+ .+. ....-|.++=++..+..|++++. ..+.+ -+++... .|+...
T Consensus 71 g~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~-~~~~~--~~v~~wd-----~~~~~~ 141 (611)
T 1nr0_A 71 GYYCASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGE-GRERF--GHVFLFD-----TGTSNG 141 (611)
T ss_dssp SSEEEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEEC-CSSCS--EEEEETT-----TCCBCB
T ss_pred CcEEEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEEC-CCCce--eEEEEee-----CCCCcc
Confidence 3467767778999999987665443 343 44567899999998777766442 11111 1222211 111100
Q ss_pred CCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCc
Q 015220 183 GFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGH 256 (411)
Q Consensus 183 ~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ 256 (411)
. + ..|.+ -+.|.......|++++.|+++++||+.+++++.++.++ .|..+++| ||.+|+....-.
T Consensus 142 --~-l----~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~-- 212 (611)
T 1nr0_A 142 --N-L----TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG-- 212 (611)
T ss_dssp --C-C----CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred --e-e----cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCC--
Confidence 0 1 12222 45676544457999999999999999999999999876 79999999 899888876543
Q ss_pred eeeEEEEecCCcEEeEeee----ccccCCcceeeeeecceeEE--eecCceeeEEEcccceEEEeeccccCCCceE-EEE
Q 015220 257 VPLKILSIEDGTVLKSFNH----LLHRNKKVDFIEQFNEKLLV--KQENENLQILDVRNFELTEVSRTEFMTPSAF-IFL 329 (411)
Q Consensus 257 ipiKIl~I~tG~~L~t~~~----LL~h~K~I~FLE~~~ekllI--KQe~~~LkI~dL~t~e~~~v~~T~f~hpsAf-ifL 329 (411)
-|+||++.+|+.+.++.. ..+|+.+|..+..++++.+| .+.+..++|||+.+++....-...-.+.... -+.
T Consensus 213 -~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 213 -TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp -CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred -cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 489999999999988521 12799999999999887544 4578899999999998876211111111122 222
Q ss_pred eeceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 330 YENQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 330 y~sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
...+.++++ .|++|++||.. |+++..+.+|.. .++.+..||||++|+|++.|. +|++||+.+|
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~-----~v~~l~~spdg~~l~s~s~D~----------~v~~Wd~~~~ 356 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNK-----AITALSSSADGKTLFSADAEG----------HINSWDISTG 356 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------CEEEEETTTC
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC-----CEEEEEEeCCCCEEEEEeCCC----------cEEEEECCCC
Confidence 245777787 89999999999 888899999998 899999999999999999997 9999999999
Q ss_pred eee
Q 015220 408 TCK 410 (411)
Q Consensus 408 k~~ 410 (411)
++.
T Consensus 357 ~~~ 359 (611)
T 1nr0_A 357 ISN 359 (611)
T ss_dssp CEE
T ss_pred cee
Confidence 874
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.83 E-value=4.8e-20 Score=167.61 Aligned_cols=192 Identities=9% Similarity=0.019 Sum_probs=147.9
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCc--eEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNY--TMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Y--s~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+.|. ++|+.|++...|++++|||+.+. +++.++..+ .|..+.++ +|.+|++..... .|+||++.+++....
T Consensus 17 ~~~s-~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~---~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 17 HAFN-SQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR---NAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CEEC-SSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS---SEEEC------CCCC
T ss_pred EEEC-CCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC---eEEEEEcCCCCceee
Confidence 4455 48999999999999999999998 788888755 89999999 788888776543 499999999982222
Q ss_pred eeeccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEEeeccccC-CCceEEEEeec---eeEEEE-ecCeEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTEVSRTEFM-TPSAFIFLYEN---QLFLTF-RNRTVAV 345 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~~T~f~-hpsAfifLy~s---qlFlSf-sd~tI~i 345 (411)
...+.+|..+|..+..++++ ++....+..|++||+.+++...+..+... |...+..+..+ ++++++ .|++|++
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~i 172 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYV 172 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEE
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEE
Confidence 22377899999999998765 46667889999999999985444445666 88999998876 677877 8899999
Q ss_pred EecC-------------------CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 346 WNFR-------------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 346 Wn~~-------------------Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
||++ |+++.++ +|.. .++.+..+|||++|++++.|. +|+|||+.+
T Consensus 173 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~v~~~~~sp~~~~l~~~~~d~----------~i~iwd~~~ 236 (377)
T 3dwl_C 173 LSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG-----WVHAVGFSPSGNALAYAGHDS----------SVTIAYPSA 236 (377)
T ss_dssp EEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS-----SEEEEEECTTSSCEEEEETTT----------EEC-CEECS
T ss_pred EEEEecccCCCccccccccccchhhhhhcc-cCCc-----eEEEEEECCCCCEEEEEeCCC----------cEEEEECCC
Confidence 9984 7788888 8888 899999999999999999987 999999999
Q ss_pred eee
Q 015220 407 VTC 409 (411)
Q Consensus 407 Gk~ 409 (411)
|++
T Consensus 237 ~~~ 239 (377)
T 3dwl_C 237 PEQ 239 (377)
T ss_dssp TTS
T ss_pred CCC
Confidence 986
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.83 E-value=2.3e-18 Score=154.32 Aligned_cols=194 Identities=7% Similarity=0.033 Sum_probs=160.4
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCce--EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEe
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys--~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~ 271 (411)
-+.|+ ++|+.|+....++.++|||+.+.+ ++.++..+ .|..+.++ +|.+|++..... .|+||++++++...
T Consensus 13 ~~~~s-~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 13 CHAWN-KDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR---NAYVWTLKGRTWKP 88 (372)
T ss_dssp EEEEC-TTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS---CEEEEEEETTEEEE
T ss_pred EEEEC-CCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC---eEEEEECCCCeeee
Confidence 35565 588999999999999999999987 88888754 89999999 788888776433 58999999999777
Q ss_pred EeeeccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEEeec-cccCCCceEEEEeec---eeEEEE-ecCeEE
Q 015220 272 SFNHLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTEVSR-TEFMTPSAFIFLYEN---QLFLTF-RNRTVA 344 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~~-T~f~hpsAfifLy~s---qlFlSf-sd~tI~ 344 (411)
.+. +.+|..+|..+..++++ ++...++..+++||+.+++...+.. ....|...+..+..+ +.++++ .|++|+
T Consensus 89 ~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 167 (372)
T 1k8k_C 89 TLV-ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 167 (372)
T ss_dssp EEE-CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eEE-eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEE
Confidence 654 56889999999998775 4556678999999999987433222 335678888888865 677777 799999
Q ss_pred EEecC-------------------CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 345 VWNFR-------------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 345 iWn~~-------------------Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
+||++ |+++.++.+|.. .++.+..+||+++|++++.|. +|.+||+.
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~----------~i~i~d~~ 232 (372)
T 1k8k_C 168 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG-----WVHGVCFSANGSRVAWVSHDS----------TVCLADAD 232 (372)
T ss_dssp EEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS-----CEEEEEECSSSSEEEEEETTT----------EEEEEEGG
T ss_pred EEEcccccccccccccccccccchhhheEecCCCCC-----eEEEEEECCCCCEEEEEeCCC----------EEEEEECC
Confidence 99952 889999999988 899999999999999999886 99999999
Q ss_pred ceeee
Q 015220 406 FVTCK 410 (411)
Q Consensus 406 tGk~~ 410 (411)
+|+++
T Consensus 233 ~~~~~ 237 (372)
T 1k8k_C 233 KKMAV 237 (372)
T ss_dssp GTTEE
T ss_pred CCcee
Confidence 99875
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.83 E-value=4.1e-19 Score=177.60 Aligned_cols=189 Identities=13% Similarity=0.126 Sum_probs=159.9
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCce--EEEEecc--CceeEEEEe-CCEEEEEEecCC-CceeeEEEEecCCcEEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD--KNVQEIKIS-PGIMLLIFTKAS-GHVPLKILSIEDGTVLK 271 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys--~iysLs~--~~VqeIkIS-dG~~Lai~q~t~-~~ipiKIl~I~tG~~L~ 271 (411)
+.|. ++|+.|++...|+++||||+.+.+ +..++.. ..|..+..| ||..|+...... ...-+++|+ +|+.+.
T Consensus 65 ~~~s-pdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~ 141 (611)
T 1nr0_A 65 AKTS-PSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNG 141 (611)
T ss_dssp EEEC-TTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCB
T ss_pred EEEC-CCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcc
Confidence 4554 689999999999999999997644 4556654 389999999 888887765443 335677776 788888
Q ss_pred EeeeccccCCcceeeeeecce---eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEE
Q 015220 272 SFNHLLHRNKKVDFIEQFNEK---LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVA 344 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ek---llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~ 344 (411)
+ +.+|..+|..++.++++ ++-.+.+..+++||+.+++... ++.+|..++..++.+ ++++|+ .|++|+
T Consensus 142 ~---l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~---~l~~H~~~V~~v~fspdg~~las~s~D~~i~ 215 (611)
T 1nr0_A 142 N---LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS---TFGEHTKFVHSVRYNPDGSLFASTGGDGTIV 215 (611)
T ss_dssp C---CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE---EECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred e---ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee---eeccccCceEEEEECCCCCEEEEEECCCcEE
Confidence 7 77999999999999985 4556789999999999988876 788999999999987 788888 899999
Q ss_pred EEecC-Cceeeeec-------cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 345 VWNFR-GELVTSFE-------DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 345 iWn~~-Gel~~s~e-------~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+||.. |+.+.+|+ +|.. .+..+..+|||++|+|++.|. +|+|||+.+|+++
T Consensus 216 lwd~~~g~~~~~~~~~~~~~~~h~~-----~V~~v~~spdg~~l~s~s~D~----------~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 216 LYNGVDGTKTGVFEDDSLKNVAHSG-----SVFGLTWSPDGTKIASASADK----------TIKIWNVATLKVE 274 (611)
T ss_dssp EEETTTCCEEEECBCTTSSSCSSSS-----CEEEEEECTTSSEEEEEETTS----------EEEEEETTTTEEE
T ss_pred EEECCCCcEeeeeccccccccccCC-----CEEEEEECCCCCEEEEEeCCC----------eEEEEeCCCCcee
Confidence 99988 99999985 6887 899999999999999999998 9999999999875
No 40
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.83 E-value=9.8e-18 Score=158.07 Aligned_cols=275 Identities=17% Similarity=0.225 Sum_probs=206.4
Q ss_pred cccceEEEeeccceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 94 KRSKIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 94 ~RS~V~EIv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
....|..+.+..++++.-...|...+||..+++.+..+.. +...|.++-++. +.+++.| .|. .++.-.
T Consensus 158 h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~--~~l~s~s---~dg--~i~~wd---- 225 (445)
T 2ovr_B 158 HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHE--KRVVSGS---RDA--TLRVWD---- 225 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET--TEEEEEE---TTS--EEEEEE----
T ss_pred CCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEEecC--CEEEEEe---CCC--EEEEEE----
Confidence 3456777777788888889999999999999998888874 555678888763 4444432 222 233222
Q ss_pred hhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEeCCEEEEEEe
Q 015220 174 YIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKISPGIMLLIFT 251 (411)
Q Consensus 174 ~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkISdG~~Lai~q 251 (411)
+..|+ ++..- -.|.+.|.-=..+|..++....|+++++||+++.+++.++..+ .|..+.. +|..+++..
T Consensus 226 -~~~~~-----~~~~~--~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~ 296 (445)
T 2ovr_B 226 -IETGQ-----CLHVL--MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGS 296 (445)
T ss_dssp -SSSCC-----EEEEE--ECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEE
T ss_pred -CCCCc-----EEEEE--cCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEe
Confidence 22222 12111 1233333222227888999999999999999999999999865 7888887 666677665
Q ss_pred cCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEee
Q 015220 252 KASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE 331 (411)
Q Consensus 252 ~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~ 331 (411)
... .|+||++.+|+.+++ +-+|...+..+...++.++....+..|++||+.+++....-...-.|..++.+++.
T Consensus 297 ~d~---~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 297 LDT---SIRVWDVETGNCIHT---LTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp TTS---CEEEEETTTCCEEEE---ECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE
T ss_pred CCC---eEEEEECCCCCEEEE---EcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE
Confidence 543 489999999999998 56888999999999998899999999999999999988733332348888888887
Q ss_pred c-eeEEEE-ecCeEEEEecC-Cceeeee-----ccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 332 N-QLFLTF-RNRTVAVWNFR-GELVTSF-----EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 332 s-qlFlSf-sd~tI~iWn~~-Gel~~s~-----e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
+ +.++++ .|++|++||++ |+++.++ .+|.. .+..+..+|||.++++|+.|.. ....|.+||
T Consensus 371 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~la~~~~dg~------~~~~l~v~d 439 (445)
T 2ovr_B 371 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG-----VVWRIRASNTKLVCAVGSRNGT------EETKLLVLD 439 (445)
T ss_dssp CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTC-----EEEEEEECSSEEEEEEECSSSS------SCCEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCc-----eEEEEEecCCEEEEEEcccCCC------CccEEEEEE
Confidence 6 667777 79999999999 9999988 35555 8999999999999999999971 123599999
Q ss_pred ecc
Q 015220 404 LMF 406 (411)
Q Consensus 404 i~t 406 (411)
+..
T Consensus 440 f~~ 442 (445)
T 2ovr_B 440 FDV 442 (445)
T ss_dssp CCC
T ss_pred CCC
Confidence 864
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.83 E-value=1.2e-17 Score=146.74 Aligned_cols=238 Identities=11% Similarity=0.077 Sum_probs=175.9
Q ss_pred CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEe
Q 015220 134 TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTY 210 (411)
Q Consensus 134 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~ 210 (411)
.+.+.|.++-++..+.-|++.+ |. .++. - ++..++... ++..-....+++ .+.|.. +|+.|+.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~----dg--~i~i--w---~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 114 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG----KG--CVKV--W---DISHPGNKS--PVSQLDCLNRDNYIRSCKLLP-DGCTLIV 114 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC----BS--EEEE--E---ETTSTTCCS--CSEEEECSCTTSBEEEEEECT-TSSEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC----CC--eEEE--E---ECCCCCcee--eeecccccCCCCcEEEEEEcC-CCCEEEE
Confidence 5777889999988766555532 33 2222 2 222222111 121111112333 356664 7888888
Q ss_pred ecCCCeEEEEEeeCce--EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCccee
Q 015220 211 SAQDSIYKVFDLKNYT--MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (411)
Q Consensus 211 ~~~ds~ykVWdL~~Ys--~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~F 285 (411)
...++.+++||+.+.+ ....+..+ .|..+.++ +|.+|++..... .+++|++.+++.+.+ +-+|..+|..
T Consensus 115 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~v~~~d~~~~~~~~~---~~~~~~~i~~ 188 (337)
T 1gxr_A 115 GGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG---NIAVWDLHNQTLVRQ---FQGHTDGASC 188 (337)
T ss_dssp EESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEE---ECCCSSCEEE
T ss_pred EcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC---cEEEEeCCCCceeee---eecccCceEE
Confidence 9999999999999987 56666644 79999999 777777765443 489999999999998 4578899999
Q ss_pred eeeecce--eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecCCceeeeeccc
Q 015220 286 IEQFNEK--LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFRGELVTSFEDH 359 (411)
Q Consensus 286 LE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~Gel~~s~e~H 359 (411)
+..++++ ++....+..|++||+.+++.... +.++..+..+..+ +.+++. .+++|.+||++......+.+|
T Consensus 189 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 264 (337)
T 1gxr_A 189 IDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ----HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH 264 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCC
T ss_pred EEECCCCCEEEEEecCCcEEEEECCCCceEee----ecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCC
Confidence 9998775 45566889999999999988762 3466777777765 566666 789999999995555678888
Q ss_pred cccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 360 LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 360 ~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.. .+..+..+||+++|++++.|. +|.+||+.+|+++
T Consensus 265 ~~-----~v~~~~~~~~~~~l~~~~~dg----------~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 265 ES-----CVLSLKFAYCGKWFVSTGKDN----------LLNAWRTPYGASI 300 (337)
T ss_dssp SS-----CEEEEEECTTSSEEEEEETTS----------EEEEEETTTCCEE
T ss_pred cc-----ceeEEEECCCCCEEEEecCCC----------cEEEEECCCCeEE
Confidence 87 899999999999999999886 9999999999865
No 42
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.83 E-value=9.2e-19 Score=164.54 Aligned_cols=185 Identities=12% Similarity=0.134 Sum_probs=154.0
Q ss_pred CeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCc
Q 015220 205 GKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (411)
Q Consensus 205 GkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~ 282 (411)
|..|+.++.|++++|||+++.+++.++.++ .|..++.+++.+|++.... --|+||++++|+.+.+ +-+|..+
T Consensus 132 ~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~d---g~i~vwd~~~~~~~~~---~~~h~~~ 205 (464)
T 3v7d_B 132 DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTD---RTVRVWDIKKGCCTHV---FEGHNST 205 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEETT---SCEEEEETTTTEEEEE---ECCCSSC
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCC---CCEEEEECCCCcEEEE---ECCCCCc
Confidence 458888999999999999999999999865 8999999944355555443 3489999999999998 5589999
Q ss_pred ceeeeeec----ceeEEeecCceeeEEEcccceEEEe--------------------eccccCCCceEEEEeec-eeEEE
Q 015220 283 VDFIEQFN----EKLLVKQENENLQILDVRNFELTEV--------------------SRTEFMTPSAFIFLYEN-QLFLT 337 (411)
Q Consensus 283 I~FLE~~~----ekllIKQe~~~LkI~dL~t~e~~~v--------------------~~T~f~hpsAfifLy~s-qlFlS 337 (411)
|..+...+ ..++....+..|++||+.+++.... ..+..+|...+.++... +.+++
T Consensus 206 v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~ 285 (464)
T 3v7d_B 206 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 285 (464)
T ss_dssp EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEE
T ss_pred cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEE
Confidence 99999873 3467778899999999999764321 12556677777777655 66777
Q ss_pred E-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 338 F-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 338 f-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+ .|++|++||++ |+++.++.+|.. .+..+..+||++.+++|+.|. +|++||+.+|+++
T Consensus 286 ~~~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~sg~~dg----------~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQMKCLYILSGHTD-----RIYSTIYDHERKRCISASMDT----------TIRIWDLENGELM 345 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEEETTTTEEEEEETTS----------CEEEEETTTTEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCC-----CEEEEEEcCCCCEEEEEeCCC----------cEEEEECCCCcEE
Confidence 7 79999999999 999999999988 899999999999999999997 9999999999875
No 43
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.83 E-value=9.8e-19 Score=164.48 Aligned_cols=190 Identities=15% Similarity=0.180 Sum_probs=155.4
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+.|. ++|+.|+.++.|++++|||+.+.+.+..+..+ .|..+.++ +|..|+..... --++||++.+|+...++
T Consensus 129 v~~s-~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~iwd~~~~~~~~~~- 203 (393)
T 1erj_A 129 VCFS-PDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRIWDLRTGQCSLTL- 203 (393)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEE-
T ss_pred EEEC-CCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEEEECCCCeeEEEE-
Confidence 5664 58999999999999999999999999999865 79999999 78877776543 35899999999998874
Q ss_pred eccccCCcceeeeeec-ce--eEEeecCceeeEEEcccceEEEeec----cccCCCceEEEEeec---eeEEEE-ecCeE
Q 015220 275 HLLHRNKKVDFIEQFN-EK--LLVKQENENLQILDVRNFELTEVSR----TEFMTPSAFIFLYEN---QLFLTF-RNRTV 343 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~-ek--llIKQe~~~LkI~dL~t~e~~~v~~----T~f~hpsAfifLy~s---qlFlSf-sd~tI 343 (411)
.+...+..+..++ ++ +.....+..+++||+.+++...... ...+|...+..+..+ +.++|+ .|++|
T Consensus 204 ---~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 204 ---SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp ---ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ---EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 3456788888887 44 4555678999999999998776221 125788889888876 678888 79999
Q ss_pred EEEecC-------------CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 344 AVWNFR-------------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 344 ~iWn~~-------------Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++||++ |....++.+|.. .+..+..++|+.+|+||+.|. +|++||+.+|+++
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~sgs~D~----------~v~iwd~~~~~~~ 345 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKD-----FVLSVATTQNDEYILSGSKDR----------GVLFWDKKSGNPL 345 (393)
T ss_dssp EEEEC---------------CEEEEEECCSS-----CEEEEEECGGGCEEEEEETTS----------EEEEEETTTCCEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccC-----cEEEEEECCCCCEEEEEeCCC----------eEEEEECCCCeEE
Confidence 999987 335568889988 789999999999999999997 9999999999875
No 44
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.83 E-value=8.9e-19 Score=163.37 Aligned_cols=188 Identities=15% Similarity=0.113 Sum_probs=158.4
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc------
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT------ 268 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~------ 268 (411)
+.|. ++|+.|++.+.|++++|||..+.+....+..+ .|..+..+ +|.+|+..... --++||++..++
T Consensus 70 ~~~s-~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d---~~i~v~~~~~~~~~~~~~ 145 (354)
T 2pbi_B 70 MDWC-KDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD---NKCSVYPLTFDKNENMAA 145 (354)
T ss_dssp EEEC-TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT---SEEEEEECCCCTTCCSGG
T ss_pred EEEC-CCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC---CCEEEEEEeccccccccc
Confidence 3554 57899999999999999999999988777644 89999999 88888876543 347899987652
Q ss_pred EEeEeeeccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----eeEEEE-ec
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----QLFLTF-RN 340 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----qlFlSf-sd 340 (411)
..++ +.+|...|..+..+++. ++..+.+..+++||+.+++... +..+|...+.++..+ ++|+|+ .|
T Consensus 146 ~~~~---~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~---~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 146 KKKS---VAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ---SFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp GCEE---EEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE---EEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred ccee---eeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE---EEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 2333 55789999999988875 5667789999999999999887 777899888887653 578888 89
Q ss_pred CeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 341 RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 341 ~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|++||++ |..+.+|++|.. .++.+..+|||+.|+|++.|. +|+|||+.+++++
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~----------~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHES-----DVNSVRYYPSGDAFASGSDDA----------TCRLYDLRADREV 275 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------CEEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEecCCCC-----CeEEEEEeCCCCEEEEEeCCC----------eEEEEECCCCcEE
Confidence 999999999 999999999998 899999999999999999997 9999999988753
No 45
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.6e-17 Score=150.37 Aligned_cols=278 Identities=12% Similarity=0.045 Sum_probs=187.5
Q ss_pred ceEEEeeccceehhhhccccceeeecccc--cEEEEEeCC-CCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 97 KIIEIVAARDIVFALAQSGVCAAFCRETN--QRICFLNVT-ADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 97 ~V~EIv~a~dii~~L~~sG~c~af~~~t~--~~ic~lN~s-~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
+|.-+-+..++++.-...|....||..++ +.+..+... +..-|+++=++....-|++.| .|. .++.-.. +
T Consensus 16 ~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s---~D~--~v~iw~~--~ 88 (330)
T 2hes_X 16 KIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS---FDS--TVSIWAK--E 88 (330)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE---TTS--CEEEEEC---
T ss_pred ceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe---CCC--cEEEEEc--c
Confidence 45555555566666677899999998776 445566544 888899999999877666544 222 2332221 1
Q ss_pred hhhhCCCC--CCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEee----CceEEEEeccC--ceeEEEEe
Q 015220 174 YIRRGKPD--AGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLK----NYTMLYSISDK--NVQEIKIS 242 (411)
Q Consensus 174 ~i~~gk~~--~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~----~Ys~iysLs~~--~VqeIkIS 242 (411)
.++.. ...++. ..-.|.+ -+.|. ++|+.|++++.|++++|||+. .++++..+..+ .|..+..+
T Consensus 89 ---~~~~~~~~~~~~~--~~~~h~~~V~~v~~s-p~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 89 ---ESADRTFEMDLLA--IIEGHENEVKGVAWS-NDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp ---------CCCEEEE--EEC----CEEEEEEC-TTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred ---cCcCccccceeEE--EEcCCCCcEEEEEEC-CCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 11100 011111 0112333 34564 579999999999999999994 45788888765 79999999
Q ss_pred -CCEEEEEEecCCCceeeEEEEecCC--cEEeEeeeccccCCcceeeeeecc--ee--EEeecCceeeEEEcccce----
Q 015220 243 -PGIMLLIFTKASGHVPLKILSIEDG--TVLKSFNHLLHRNKKVDFIEQFNE--KL--LVKQENENLQILDVRNFE---- 311 (411)
Q Consensus 243 -dG~~Lai~q~t~~~ipiKIl~I~tG--~~L~t~~~LL~h~K~I~FLE~~~e--kl--lIKQe~~~LkI~dL~t~e---- 311 (411)
+|.+|+....-. .|+||++.++ +.+.+ +-+|..+|..+..+++ .. .-...+..++|||+.+++
T Consensus 163 p~~~~l~s~s~D~---~i~iW~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 163 PSEALLASSSYDD---TVRIWKDYDDDWECVAV---LNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp SSSSEEEEEETTS---CEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred CCCCEEEEEcCCC---eEEEEECCCCCeeEEEE---ccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 788887765443 5899999988 56666 6689999999999987 43 445678999999998762
Q ss_pred -EEEeeccccC-CCceEEEEeec--eeEEEE-ecCeEEEEecC-Cc--eee-eeccccccCCCCccceEEEcC--CCCEE
Q 015220 312 -LTEVSRTEFM-TPSAFIFLYEN--QLFLTF-RNRTVAVWNFR-GE--LVT-SFEDHLLWHPDCNTNNIYITS--DQDLI 380 (411)
Q Consensus 312 -~~~v~~T~f~-hpsAfifLy~s--qlFlSf-sd~tI~iWn~~-Ge--l~~-s~e~H~~~~~~c~~n~i~Is~--Dqd~i 380 (411)
......++-. |...+..++.+ .+++++ .|++|++|+.. |+ ++. .+.+|.. ..++.+..+| |+++|
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~----~~v~~v~~~~~~~~~~l 312 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGV----YEINVVKWLELNGKTIL 312 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTT----SCEEEEEEC-----CCE
T ss_pred ceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecccccccc----ceEEEEEEecCCCceEE
Confidence 1111223333 88888888765 567777 89999999998 63 343 3456653 3688899999 89999
Q ss_pred EEEecCCCCCccccCCceEEEeeecce
Q 015220 381 ISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 381 iS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+|||.|. +|+|||+.+.
T Consensus 313 as~s~Dg----------~v~~W~~~~~ 329 (330)
T 2hes_X 313 ATGGDDG----------IVNFWSLEKA 329 (330)
T ss_dssp EEEETTS----------EEEEEEC---
T ss_pred EEecCCC----------cEEEEEeccC
Confidence 9999997 9999999764
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.82 E-value=3.5e-19 Score=166.72 Aligned_cols=185 Identities=15% Similarity=0.164 Sum_probs=151.0
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CC-EEEEEEecCCCceeeEEEEecCCcEEeEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PG-IMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~tG~~L~t~ 273 (411)
+.|. ++|+.|++...|++++|||+++.+++..+..+ .|..+.++ ++ .+++.... .. -|+||++.+|+.+..+
T Consensus 145 v~~s-pdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~-dg--~v~~wd~~~~~~~~~~ 220 (357)
T 4g56_B 145 LSVF-SDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE-DG--RILLWDTRKPKPATRI 220 (357)
T ss_dssp EEEC-SSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET-TS--CEEECCTTSSSCBCBC
T ss_pred EEEC-CCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc-CC--ceEEEECCCCceeeee
Confidence 3453 68999999999999999999999999999865 89999998 44 33444332 22 4899999999998875
Q ss_pred eeccccCCcceeeeeecce--eE-EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEE
Q 015220 274 NHLLHRNKKVDFIEQFNEK--LL-VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAV 345 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ek--ll-IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~i 345 (411)
. +..+...+..+..++++ ++ ...++..|++||+.+++... +.-+|..++..++.+ ++++|+ .|++|+|
T Consensus 221 ~-~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~---~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 221 D-FCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ---TSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp C-CTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE---EECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred e-eccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE---EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 4 34566788888888753 33 34678899999999999877 777899999999875 578888 6899999
Q ss_pred EecC-CceeeeeccccccCCCCccceEEEcC-CCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 346 WNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 346 Wn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~-Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
||.+ |++++.+ +|.. .++.|+.|| |+.+|+|++.|. +|++||+.+
T Consensus 297 wd~~~~~~~~~~-~H~~-----~V~~vafsP~d~~~l~s~s~Dg----------~v~iW~~~~ 343 (357)
T 4g56_B 297 LDADFSEVFRDL-SHRD-----FVTGVAWSPLDHSKFTTVGWDH----------KVLHHHLPS 343 (357)
T ss_dssp ECTTSCEEEEEC-CCSS-----CEEEEEECSSSTTEEEEEETTS----------CEEEEECC-
T ss_pred EECCCCcEeEEC-CCCC-----CEEEEEEeCCCCCEEEEEcCCC----------eEEEEECCC
Confidence 9999 8888766 7888 799999998 899999999997 999999965
No 47
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.82 E-value=4.7e-18 Score=160.66 Aligned_cols=266 Identities=11% Similarity=0.129 Sum_probs=191.3
Q ss_pred ceEEEeeccceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhh
Q 015220 97 KIIEIVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR 176 (411)
Q Consensus 97 ~V~EIv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~ 176 (411)
.|.-+-.-.+.+++-...|...+||..+++.+..+.. +..-|.++-++ .+.|++. ..|. .++.-. +.
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~~--~~~l~sg---~~dg--~i~vwd-----~~ 201 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQYD--ERVIITG---SSDS--TVRVWD-----VN 201 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEECC--SSEEEEE---ETTS--CEEEEE-----SS
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEEC--CCEEEEE---cCCC--eEEEEE-----CC
Confidence 3444444567888888999999999999998888875 44556777762 3333332 2232 222222 22
Q ss_pred hCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE---EEeccC--ceeEEEEeCCEEEEEEe
Q 015220 177 RGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML---YSISDK--NVQEIKISPGIMLLIFT 251 (411)
Q Consensus 177 ~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i---ysLs~~--~VqeIkISdG~~Lai~q 251 (411)
.|+ .+.. .-.|.+-|.-=..++..|+.++.|++++|||+.+.+.+ ..+..+ .|..+.. +|.+|++..
T Consensus 202 ~~~-----~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~ 273 (435)
T 1p22_A 202 TGE-----MLNT--LIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSAS 273 (435)
T ss_dssp SCC-----EEEE--ECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEE
T ss_pred CCc-----EEEE--EcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEe
Confidence 222 1111 11233433322334568888999999999999987754 555544 7888887 555555554
Q ss_pred cCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEee
Q 015220 252 KASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE 331 (411)
Q Consensus 252 ~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~ 331 (411)
.. -.|+||++.+|+.+.+ +-+|..+|..+...+..++....+..|++||+.+++... +..+|...+.++..
T Consensus 274 ~d---g~i~vwd~~~~~~~~~---~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~---~~~~h~~~v~~~~~ 344 (435)
T 1p22_A 274 GD---RTIKVWNTSTCEFVRT---LNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR---VLEGHEELVRCIRF 344 (435)
T ss_dssp TT---SEEEEEETTTCCEEEE---EECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEC
T ss_pred CC---CeEEEEECCcCcEEEE---EcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEE---EEeCCcCcEEEEEe
Confidence 32 3589999999999999 458899999999988888888999999999999999887 77789999988886
Q ss_pred c-eeEEEE-ecCeEEEEecC-Cc---------eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceE
Q 015220 332 N-QLFLTF-RNRTVAVWNFR-GE---------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKL 399 (411)
Q Consensus 332 s-qlFlSf-sd~tI~iWn~~-Ge---------l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI 399 (411)
. +.++++ .|++|++||++ |. .+.++.+|.. .+..+.. |++.|+|++.|. +|
T Consensus 345 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~--~~~~l~s~s~Dg----------~i 407 (435)
T 1p22_A 345 DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSG-----RVFRLQF--DEFQIVSSSHDD----------TI 407 (435)
T ss_dssp CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSS-----CCCCEEE--CSSCEEECCSSS----------EE
T ss_pred cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCC-----CeEEEEe--CCCEEEEEeCCC----------EE
Confidence 6 667777 79999999998 66 7889999988 6777777 899999999997 99
Q ss_pred EEeeecceee
Q 015220 400 FVSLLMFVTC 409 (411)
Q Consensus 400 ~i~~i~tGk~ 409 (411)
+|||+.++..
T Consensus 408 ~iwd~~~~~~ 417 (435)
T 1p22_A 408 LIWDFLNDPA 417 (435)
T ss_dssp EEEC------
T ss_pred EEEECCCCCC
Confidence 9999998764
No 48
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.82 E-value=2.5e-18 Score=158.95 Aligned_cols=188 Identities=11% Similarity=0.127 Sum_probs=153.8
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEE--Ee-ccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc--
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SI-SDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT-- 268 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iy--sL-s~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~-- 268 (411)
.+.|. ++|+.|++++.|++++|||+.+.+.+. .+ .++ .|..+++| +|.+|+...... .++||++.+++
T Consensus 21 ~l~~s-p~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~---~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 21 FLAWN-PAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA---TTCIWKKNQDDFE 96 (345)
T ss_dssp EEEEC-TTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS---CEEEEEECCC-EE
T ss_pred EEEEC-CCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC---cEEEEEccCCCeE
Confidence 57775 589999999999999999999987542 33 233 79999999 888888876543 47999999885
Q ss_pred EEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCe
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRT 342 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~t 342 (411)
.+.+ +-+|..+|..+..++++-++. +.+..|+|||+.+++..+...+.-.|...+..+..+ ++++++ .|++
T Consensus 97 ~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 173 (345)
T 3fm0_A 97 CVTT---LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDT 173 (345)
T ss_dssp EEEE---ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSC
T ss_pred EEEE---ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCc
Confidence 4455 668999999999998765444 578899999999886655445677888888888866 678888 7899
Q ss_pred EEEEecC-Cc--eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 343 VAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 343 I~iWn~~-Ge--l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
|++|+.+ ++ .+.++++|.. .+..+..+|||++|+|++.|. +|+|||+.+
T Consensus 174 i~~w~~~~~~~~~~~~~~~h~~-----~v~~l~~sp~g~~l~s~s~D~----------~v~iW~~~~ 225 (345)
T 3fm0_A 174 VKLYREEEDDWVCCATLEGHES-----TVWSLAFDPSGQRLASCSDDR----------TVRIWRQYL 225 (345)
T ss_dssp EEEEEEETTEEEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTS----------CEEEEEEEC
T ss_pred EEEEEecCCCEEEEEEecCCCC-----ceEEEEECCCCCEEEEEeCCC----------eEEEecccc
Confidence 9999998 55 4569999998 899999999999999999997 999999743
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.82 E-value=1.2e-18 Score=154.73 Aligned_cols=250 Identities=13% Similarity=0.147 Sum_probs=179.9
Q ss_pred EEeCCCCceEEEEEeecC---CCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee-------cccCCCCeEE
Q 015220 130 FLNVTADEVIRSLFYNKN---NDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES-------ESLKWPGFVE 199 (411)
Q Consensus 130 ~lN~s~~evIrsifyN~~---n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~-------~~l~~PgfvE 199 (411)
.+-..+..-|.+|=++.. ++.+++++ .+++ .++..... .++. ...+.. ..+..-.|-.
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~--~~~~--~v~vw~~~-----~~~~---~~~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFAT--VGSN--RVTLYECH-----SQGE---IRLLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEE--EETT--EEEEEEEC-----GGGC---EEEEEEEECSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEE--CCCC--EEEEEEcC-----CCcE---EEeeeeccccCCCCcEEEEEecc
Confidence 566677788888888863 56666633 2333 23333332 1110 001111 1111112222
Q ss_pred eeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe--CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 200 FDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
-...+|..|+....|++++|||+.+.+++.++..+ .|..++.+ ++.+|++.... -.|+||++.+|+.+..+..
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTTTEEEEEECS
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEeecCeEEEEecc
Confidence 22334889999999999999999999999999844 89999999 57777776653 3599999999999998655
Q ss_pred ccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEEee-------------------------ccccCCCceEEE
Q 015220 276 LLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTEVS-------------------------RTEFMTPSAFIF 328 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~-------------------------~T~f~hpsAfif 328 (411)
+-+|..+|..+..++++ ++....+..|++||+.+++....- .+..+|...+.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 57899999999998775 455567889999999987654310 122237777777
Q ss_pred Eeec-eeEEEE-ecCeEEEEecC-Cc--------------eeeeeccccccCCCCccceEEEcCC--CCEEEEEecCCCC
Q 015220 329 LYEN-QLFLTF-RNRTVAVWNFR-GE--------------LVTSFEDHLLWHPDCNTNNIYITSD--QDLIISYCKADSD 389 (411)
Q Consensus 329 Ly~s-qlFlSf-sd~tI~iWn~~-Ge--------------l~~s~e~H~~~~~~c~~n~i~Is~D--qd~iiS~~~d~~~ 389 (411)
+..+ +++++. .|++|++||++ ++ ++.++.+|.. .++.+.++|| |.+|++|+.|.
T Consensus 237 ~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~~~l~~~~~dg-- 309 (366)
T 3k26_A 237 VRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC-----DIWYMRFSMDFWQKMLALGNQVG-- 309 (366)
T ss_dssp EEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC-----CSSCCCCEECTTSSEEEEECTTS--
T ss_pred EEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCC-----cEEEEEEcCCCCCcEEEEEecCC--
Confidence 7654 677777 89999999998 53 4788888887 7899999999 99999999886
Q ss_pred CccccCCceEEEeeecceee
Q 015220 390 DPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 390 ~~~~~~~gtI~i~~i~tGk~ 409 (411)
+|.|||+.+|++
T Consensus 310 --------~i~vwd~~~~~~ 321 (366)
T 3k26_A 310 --------KLYVWDLEVEDP 321 (366)
T ss_dssp --------CEEEEECCSSSG
T ss_pred --------cEEEEECCCCCC
Confidence 999999999864
No 50
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.82 E-value=1.1e-18 Score=157.76 Aligned_cols=187 Identities=14% Similarity=0.189 Sum_probs=151.5
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeC--ceEEEEeccC--ceeEEEEe-C--CEEEEEEecCCCceeeEEEEecCCc--
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKN--YTMLYSISDK--NVQEIKIS-P--GIMLLIFTKASGHVPLKILSIEDGT-- 268 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~--Ys~iysLs~~--~VqeIkIS-d--G~~Lai~q~t~~~ipiKIl~I~tG~-- 268 (411)
+.|+ ++|+.|++++.|++++|||+.+ .+++.++.++ .|..+..+ | |.+|+....-. -|+||++++|+
T Consensus 15 ~~~s-~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~---~v~iWd~~~~~~~ 90 (297)
T 2pm7_B 15 AVMD-YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG---KVMIWKEENGRWS 90 (297)
T ss_dssp EEEC-TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT---EEEEEEBSSSCBC
T ss_pred EEEC-CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC---EEEEEEcCCCceE
Confidence 3565 7899999999999999999975 5788899866 89999997 3 78888776443 48999999995
Q ss_pred EEeEeeeccccCCcceeeeeecc----eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec------------
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNE----KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN------------ 332 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~e----kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s------------ 332 (411)
.+.+ +-+|..+|..+..+++ .++....+..+++||+.+++... ..+...|...+..+..+
T Consensus 91 ~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 91 QIAV---HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp CCEE---ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC---------
T ss_pred EEEE---eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCcccccccCCC
Confidence 4444 4578999999999875 45677889999999999874321 12455688888777654
Q ss_pred ----eeEEEE-ecCeEEEEecC-Cc----eeeeeccccccCCCCccceEEEcCCC---CEEEEEecCCCCCccccCCceE
Q 015220 333 ----QLFLTF-RNRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSDQ---DLIISYCKADSDDPLAEGNGKL 399 (411)
Q Consensus 333 ----qlFlSf-sd~tI~iWn~~-Ge----l~~s~e~H~~~~~~c~~n~i~Is~Dq---d~iiS~~~d~~~~~~~~~~gtI 399 (411)
++++|+ .|++|++||++ +. ++.+|++|.. .++.|..+||+ .+|+|+|.|. +|
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~-----~V~~v~~sp~~~~~~~las~s~D~----------~v 231 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRDVAWSPTVLLRSYMASVSQDR----------TC 231 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-----CEEEEEECCCCSSSEEEEEEETTS----------CE
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC-----ceEEEEECCCCCCceEEEEEECCC----------cE
Confidence 478888 79999999998 55 7789999998 79999999995 8999999997 99
Q ss_pred EEeeecce
Q 015220 400 FVSLLMFV 407 (411)
Q Consensus 400 ~i~~i~tG 407 (411)
+|||+.++
T Consensus 232 ~iWd~~~~ 239 (297)
T 2pm7_B 232 IIWTQDNE 239 (297)
T ss_dssp EEEEESST
T ss_pred EEEEeCCC
Confidence 99999875
No 51
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.82 E-value=4.8e-18 Score=150.41 Aligned_cols=190 Identities=14% Similarity=0.136 Sum_probs=154.8
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCce-----EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT-----MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-----~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
|.|...+|+.|++++.|+++||||+.+.+ ++.++.++ .|..+.++ ||.+|+...... .+++|+..++..
T Consensus 44 v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~---~i~~~~~~~~~~ 120 (340)
T 4aow_A 44 IATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG---TLRLWDLTTGTT 120 (340)
T ss_dssp EEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTTEE
T ss_pred EEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc---cceEEeecccce
Confidence 36777778999999999999999998754 56677754 89999999 888888776543 589999999999
Q ss_pred EeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----eeEEEE-ecC
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----QLFLTF-RNR 341 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----qlFlSf-sd~ 341 (411)
... ...+...+..+...++.- +....+..+++||+........ ....|...+..+..+ .++++. .|+
T Consensus 121 ~~~---~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 121 TRR---FVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV--QDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp EEE---EECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEE--CSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred eee---ecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEE--EeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 888 446666777777666554 4456789999999998776653 555677777776643 567777 789
Q ss_pred eEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 342 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 342 tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+|++||++ +.++.++.+|.. .++.+.++|||++|+||+.|. +|++||+.+++++
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~Dg----------~i~iwd~~~~~~~ 250 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTG-----YLNTVTVSPDGSLCASGGKDG----------QAMLWDLNEGKHL 250 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTC----------EEEEEETTTTEEE
T ss_pred EEEEEECCCCceeeEecCCCC-----cEEEEEECCCCCEEEEEeCCC----------eEEEEEeccCcee
Confidence 99999999 899999999998 899999999999999999997 9999999988875
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.82 E-value=7.5e-18 Score=152.21 Aligned_cols=269 Identities=12% Similarity=0.101 Sum_probs=198.2
Q ss_pred cceEEEeeccc---eehhhhccccceeeec----cccc------EEEEEeCC---------CCceEEEEEeecCCCeEEE
Q 015220 96 SKIIEIVAARD---IVFALAQSGVCAAFCR----ETNQ------RICFLNVT---------ADEVIRSLFYNKNNDSLIT 153 (411)
Q Consensus 96 S~V~EIv~a~d---ii~~L~~sG~c~af~~----~t~~------~ic~lN~s---------~~evIrsifyN~~n~slI~ 153 (411)
.+|.-+....| ++++-...|....|+. .+++ ..+.+... +..-|.++-++...+-|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 44555555433 7777778899999999 8888 56666542 4558999999987766665
Q ss_pred EEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEE
Q 015220 154 VSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS 230 (411)
Q Consensus 154 vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iys 230 (411)
.+ .|. .++... ..|+ ++..- -.|++ -+.|. ++|+.|++...|+.+++||+.+.+.+..
T Consensus 126 ~~---~dg--~i~i~~------~~~~-----~~~~~--~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 126 GV---ENG--ELRLWN------KTGA-----LLNVL--NFHRAPIVSVKWN-KDGTHIISMDVENVTILWNVISGTVMQH 186 (425)
T ss_dssp EE---TTS--CEEEEE------TTSC-----EEEEE--CCCCSCEEEEEEC-TTSSEEEEEETTCCEEEEETTTTEEEEE
T ss_pred Ee---CCC--eEEEEe------CCCC-----eeeec--cCCCccEEEEEEC-CCCCEEEEEecCCeEEEEECCCCcEEEE
Confidence 33 222 233221 1111 11110 11222 34564 4788888889999999999999999988
Q ss_pred eccC--c---------------eeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce
Q 015220 231 ISDK--N---------------VQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK 292 (411)
Q Consensus 231 Ls~~--~---------------VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek 292 (411)
+..+ . +..+..+ ++. +++... .-.|++|++.+++.+.. +.+|..+|..+..++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~g~i~~~d~~~~~~~~~---~~~~~~~i~~~~~~~~~ 259 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGP---KGAIFVYQITEKTPTGK---LIGHHGPISVLEFNDTN 259 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETTE-EEEECG---GGCEEEEETTCSSCSEE---ECCCSSCEEEEEEETTT
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcC---CCeEEEEEcCCCceeee---eccCCCceEEEEECCCC
Confidence 8755 2 8888888 555 444433 24689999999999988 55889999999999776
Q ss_pred --eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec--eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCC
Q 015220 293 --LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN--QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDC 366 (411)
Q Consensus 293 --llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s--qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c 366 (411)
++....+..|++||+.+++... +...|+..+..+..+ ..+++. .|++|++||++ |+++..+..|..
T Consensus 260 ~~l~~~~~d~~i~i~d~~~~~~~~---~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----- 331 (425)
T 1r5m_A 260 KLLLSASDDGTLRIWHGGNGNSQN---CFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGV----- 331 (425)
T ss_dssp TEEEEEETTSCEEEECSSSBSCSE---EECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTC-----
T ss_pred CEEEEEcCCCEEEEEECCCCccce---EecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCc-----
Confidence 5666778999999999998776 556688888888766 366666 89999999998 999999999987
Q ss_pred ccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 367 ~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+..+.++|||++|++++.|. +|.|||+.+++
T Consensus 332 ~i~~~~~s~~~~~l~~~~~dg----------~i~i~~~~~~~ 363 (425)
T 1r5m_A 332 PIFAGRISQDGQKYAVAFMDG----------QVNVYDLKKLN 363 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTS----------CEEEEECHHHH
T ss_pred cEEEEEEcCCCCEEEEEECCC----------eEEEEECCCCc
Confidence 899999999999999999886 99999999987
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.82 E-value=3.3e-17 Score=143.91 Aligned_cols=256 Identities=16% Similarity=0.159 Sum_probs=187.7
Q ss_pred ceehhhhccccceeeecccccEE---EEEeC-CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCC
Q 015220 106 DIVFALAQSGVCAAFCRETNQRI---CFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~i---c~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~ 181 (411)
.++++-. .|....||..+++.. ..+.. .+...|.++-++...+.|++.+ .| ..++...+ ..++
T Consensus 64 ~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d--~~i~~~d~-----~~~~-- 130 (337)
T 1gxr_A 64 RHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG---EA--STLSIWDL-----AAPT-- 130 (337)
T ss_dssp SEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---SS--SEEEEEEC-----CCC---
T ss_pred cEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---CC--CcEEEEEC-----CCCC--
Confidence 3455555 799999998877633 33332 5677899999999777666643 22 22333322 1111
Q ss_pred CCCcceeecccCCCC---eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCC
Q 015220 182 AGFALFESESLKWPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASG 255 (411)
Q Consensus 182 ~~~~LF~~~~l~~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~ 255 (411)
+......-.+.+ -+.|.. +|+.|+....++.++|||+++.+++..+..+ .|..+.++ +|.+|++....
T Consensus 131 ---~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 204 (337)
T 1gxr_A 131 ---PRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-- 204 (337)
T ss_dssp ----EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--
T ss_pred ---cceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC--
Confidence 111111111222 345654 7888899999999999999999999999854 89999999 78777776543
Q ss_pred ceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-
Q 015220 256 HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN- 332 (411)
Q Consensus 256 ~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s- 332 (411)
-.|++|++.+++.+..+ .+..++..+..++++- ++..++..|++||+.+++... ...|+..+..+..+
T Consensus 205 -g~i~~~d~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~~~~v~~~~~~~ 275 (337)
T 1gxr_A 205 -NTVRSWDLREGRQLQQH----DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ----LHLHESCVLSLKFAY 275 (337)
T ss_dssp -SEEEEEETTTTEEEEEE----ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE----ECCCSSCEEEEEECT
T ss_pred -CcEEEEECCCCceEeee----cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE----EcCCccceeEEEECC
Confidence 35899999999999874 4678899999887754 555678999999999998764 45688888888776
Q ss_pred --eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 333 --QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 333 --qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
+++++. .|++|++||+. |+++..+ .|.. .+..+.++||+++|++++.|. +|.+||+.
T Consensus 276 ~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~-----~v~~~~~s~~~~~l~~~~~dg----------~i~iw~~~ 336 (337)
T 1gxr_A 276 CGKWFVSTGKDNLLNAWRTPYGASIFQS-KESS-----SVLSCDISVDDKYIVTGSGDK----------KATVYEVI 336 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEE-ECSS-----CEEEEEECTTSCEEEEEETTS----------CEEEEEEE
T ss_pred CCCEEEEecCCCcEEEEECCCCeEEEEe-cCCC-----cEEEEEECCCCCEEEEecCCC----------eEEEEEEe
Confidence 667777 78999999999 8777543 4544 789999999999999999986 99999985
No 54
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.82 E-value=5.6e-18 Score=155.31 Aligned_cols=273 Identities=11% Similarity=0.174 Sum_probs=185.4
Q ss_pred ceEEEeecc---ceehhhhccccceeeecccccEEEEEeC-CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 97 KIIEIVAAR---DIVFALAQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 97 ~V~EIv~a~---dii~~L~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
.|.-+.... .+++.-...|....||..+++..+.+.. .+..-|.++=++..+..++.++ ..|. .++. -++
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~--~~d~--~i~i--wd~ 148 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS--SIRG--ATTL--RDF 148 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE--ETTT--EEEE--EET
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE--eCCC--EEEE--EEC
Confidence 444444442 4677777889999999999999998874 6788899999988554555422 2332 2222 222
Q ss_pred hhhhhCCCCCCCcceeecc--cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCE-E
Q 015220 173 EYIRRGKPDAGFALFESES--LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGI-M 246 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~--l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~-~ 246 (411)
+ ++ ....+.... -...--+.|. ++|+.|+....|++++|||+ +.+++.++..+ .|..+.++ +|. +
T Consensus 149 ~----~~---~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 149 S----GS---VIQVFAKTDSWDYWYCCVDVS-VSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp T----SC---EEEEEECCCCSSCCEEEEEEE-TTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred C----CC---ceEEEeccCCCCCCeEEEEEC-CCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 1 11 000111100 0112345665 58889999999999999999 67788888754 89999999 565 6
Q ss_pred EEEEecCCCceeeEEEEecC----CcEEeEeeeccccCCcceeeeeec-ce--eEEeecCceeeEEEcccceEEE-e---
Q 015220 247 LLIFTKASGHVPLKILSIED----GTVLKSFNHLLHRNKKVDFIEQFN-EK--LLVKQENENLQILDVRNFELTE-V--- 315 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~t----G~~L~t~~~LL~h~K~I~FLE~~~-ek--llIKQe~~~LkI~dL~t~e~~~-v--- 315 (411)
|++.... -.|+||++.+ ++++.+ ++|..+|..+..++ ++ ++....+..|++||+.+++... +
T Consensus 220 l~s~~~d---~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 292 (383)
T 3ei3_B 220 MATSSVD---ATVKLWDLRNIKDKNSYIAE----MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIH 292 (383)
T ss_dssp EEEEETT---SEEEEEEGGGCCSTTCEEEE----EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEEC
T ss_pred EEEEeCC---CEEEEEeCCCCCcccceEEE----ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccc
Confidence 6665443 2589999999 666665 47899999999988 44 4555677999999999977643 1
Q ss_pred eccccCCCce----------EEEEeec--eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEE
Q 015220 316 SRTEFMTPSA----------FIFLYEN--QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 316 ~~T~f~hpsA----------fifLy~s--qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
+...+.|... ++++..+ ..+ ++ .|++|++||+. |+++.++.+|.. ...++.+..+|||++|+
T Consensus 293 ~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~---~~~~~~~~~s~~g~~l~ 368 (383)
T 3ei3_B 293 PHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNA---AGIISLNKFSPTGDVLA 368 (383)
T ss_dssp CBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTB---CSCCCEEEECTTSSEEE
T ss_pred cccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCC---CceEEEEEEecCccEEE
Confidence 1111112221 2222221 112 44 79999999998 999999998541 12677789999999999
Q ss_pred EEecCCCCCccccCCceEEEeeecc
Q 015220 382 SYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 382 S~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
+++ |. +|+|||+.+
T Consensus 369 s~s-d~----------~i~iw~~~~ 382 (383)
T 3ei3_B 369 SGM-GF----------NILIWNRED 382 (383)
T ss_dssp EEE-TT----------EEEEEECC-
T ss_pred Eec-CC----------cEEEEecCC
Confidence 997 76 999999975
No 55
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.6e-17 Score=144.95 Aligned_cols=274 Identities=11% Similarity=0.099 Sum_probs=197.5
Q ss_pred cccceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeee
Q 015220 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (411)
Q Consensus 94 ~RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 171 (411)
-..+|.-+... ..++++-...|...+||..+++.+..+.. +..-|.++-++...+.|++.| .|. .++.-
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~---~dg--~i~iw--- 101 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTKYCVTGS---ADY--SIKLW--- 101 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEE---TTT--EEEEE---
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCCEEEEEe---CCC--eEEEE---
Confidence 34556665554 34666667789999999999999888864 455688898888777666543 222 22222
Q ss_pred hhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCC-----CeEEEEEeeCceEE-----------EEeccC-
Q 015220 172 IEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD-----SIYKVFDLKNYTML-----------YSISDK- 234 (411)
Q Consensus 172 ~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~d-----s~ykVWdL~~Ys~i-----------ysLs~~- 234 (411)
++..|+ .+..-..-..+--+.|+ ++|+.++....+ +.++|||+.+.+.. ..+..+
T Consensus 102 --d~~~~~-----~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (369)
T 3zwl_B 102 --DVSNGQ-----CVATWKSPVPVKRVEFS-PCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHE 173 (369)
T ss_dssp --ETTTCC-----EEEEEECSSCEEEEEEC-TTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCT
T ss_pred --ECCCCc-----EEEEeecCCCeEEEEEc-cCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCc
Confidence 222222 12221111223345665 477888888877 99999999987522 222211
Q ss_pred ---ceeEEEEe-CCEEEEEEecCCCceeeEEEEecC-CcEEeEeeeccccCCcceeeeeeccee--EEeecCceeeEEEc
Q 015220 235 ---NVQEIKIS-PGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQENENLQILDV 307 (411)
Q Consensus 235 ---~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t-G~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL 307 (411)
.+..+.++ +|.+|++.... -.|.+|++.+ ++.+.. +-+|..+|..+..++++. +....+..|++||+
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~ 247 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHKD---GKISKYDVSNNYEYVDS---IDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDV 247 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEETT---SEEEEEETTTTTEEEEE---EECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CccceeEEEEcCCCCEEEEEcCC---CEEEEEECCCCcEeEEE---EecCCCceeEEEECCCCCEEEEecCCceEEEEEC
Confidence 78888898 78777776543 3689999999 788887 557889999999988764 45567889999999
Q ss_pred ccceEEEeeccccCCCceEEEEeec---eeEEEE-ecC--------------eEEEEecC-CceeeeeccccccCCCCcc
Q 015220 308 RNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNR--------------TVAVWNFR-GELVTSFEDHLLWHPDCNT 368 (411)
Q Consensus 308 ~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~--------------tI~iWn~~-Gel~~s~e~H~~~~~~c~~ 368 (411)
.+++.... +.++..+..+..+ +.+++. .++ ++.+||.. |+++..+.+|.. .+
T Consensus 248 ~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~v 318 (369)
T 3zwl_B 248 STLQVLKK----YETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFG-----PL 318 (369)
T ss_dssp TTCCEEEE----EECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSS-----CE
T ss_pred CCCceeee----ecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccC-----cE
Confidence 99988863 2256666666655 555555 555 89999999 999999999988 89
Q ss_pred ceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 369 NNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 369 n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+.+.++|||++|++++.|. +|+|||+.+|+.
T Consensus 319 ~~~~~s~~~~~l~s~~~dg----------~v~iw~~~~~~~ 349 (369)
T 3zwl_B 319 NTVAISPQGTSYASGGEDG----------FIRLHHFEKSYF 349 (369)
T ss_dssp EEEEECTTSSEEEEEETTS----------EEEEEEECHHHH
T ss_pred EEEEECCCCCEEEEEcCCC----------eEEEEECccccc
Confidence 9999999999999999997 999999998864
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.82 E-value=3.6e-18 Score=159.27 Aligned_cols=287 Identities=12% Similarity=0.099 Sum_probs=193.5
Q ss_pred ccceEEEeecc---ceehhhhccccceeeeccc---cc-EEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeee
Q 015220 95 RSKIIEIVAAR---DIVFALAQSGVCAAFCRET---NQ-RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRC 167 (411)
Q Consensus 95 RS~V~EIv~a~---dii~~L~~sG~c~af~~~t---~~-~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~c 167 (411)
...|..+.+.. .+++.-...|....||..+ ++ +.|.+...+..-|.+|-++...+.|++.| .|. .++.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~dg--~i~v 137 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS---KDG--QIIV 137 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE---TTS--EEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe---CCC--EEEE
Confidence 35676666655 4777777889999999877 54 22333334677899999998776666543 222 2332
Q ss_pred EeeehhhhhhCCCCCCC--cceeecccC---CCCeEE----eeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc----C
Q 015220 168 RSTRIEYIRRGKPDAGF--ALFESESLK---WPGFVE----FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD----K 234 (411)
Q Consensus 168 r~~~~~~i~~gk~~~~~--~LF~~~~l~---~PgfvE----FDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~----~ 234 (411)
-.+ +.-..|+.-.-. ..-....+. +.+++- +..++|..|+....|++++|||+++.+++.++.. .
T Consensus 138 wd~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 138 LKV--NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEE--EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEe--ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 222 111111110000 000000000 111111 1346899999999999999999999999999975 4
Q ss_pred ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeec----cee--EEeecCceeeEEEc
Q 015220 235 NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN----EKL--LVKQENENLQILDV 307 (411)
Q Consensus 235 ~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~----ekl--lIKQe~~~LkI~dL 307 (411)
.|..+.++ +|.+|++..... -|+||++.+|++++++. ++|..+|..+...+ ++. +....+..|+|||+
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRG---IIDIWDIRFNVLIRSWS--FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTS---CEEEEETTTTEEEEEEB--CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred ceEEEEECCCCCEEEEEcCCC---eEEEEEcCCccEEEEEe--cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 89999999 888888776553 48999999999999854 37778999995554 443 44456788999999
Q ss_pred ccceEEEeeccc---------------------cC--CCceEEEEeec--eeEEEE-ecCeEEEEecC-Cceeeeecccc
Q 015220 308 RNFELTEVSRTE---------------------FM--TPSAFIFLYEN--QLFLTF-RNRTVAVWNFR-GELVTSFEDHL 360 (411)
Q Consensus 308 ~t~e~~~v~~T~---------------------f~--hpsAfifLy~s--qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~ 360 (411)
.+++....-... .+ |...+.+++.+ ++++|+ .|++|++||++ |+++.++.+|.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 999987732211 11 33344444443 788888 79999999999 99999888852
Q ss_pred cc--------------------------------CCCCccceEEEcCC--CCEEEEEecCCCCCccccCCceEEEee
Q 015220 361 LW--------------------------------HPDCNTNNIYITSD--QDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 361 ~~--------------------------------~~~c~~n~i~Is~D--qd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
.. ...-.++.|.++++ +.+|+||+.|. +|+||+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG----------~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSG----------LIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTS----------CEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCc----------eEEEeC
Confidence 10 01237888999998 88999999996 999995
No 57
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.82 E-value=1.9e-18 Score=163.28 Aligned_cols=183 Identities=13% Similarity=0.222 Sum_probs=158.1
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCC
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK 281 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K 281 (411)
+|+.|+.++.|++++|||+.+.+++.++..+ .|..+.. +|.+|++.... -.|+||++++|+.+.+ +-+|..
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~d---g~i~vwd~~~~~~~~~---~~~h~~ 214 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-DERVIITGSSD---STVRVWDVNTGEMLNT---LIHHCE 214 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETT---SCEEEEESSSCCEEEE---ECCCCS
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCC---CeEEEEECCCCcEEEE---EcCCCC
Confidence 6889999999999999999999999999866 6877777 67777777544 3589999999999998 568999
Q ss_pred cceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-eeEEEE-ecCeEEEEecC-Cceeeeecc
Q 015220 282 KVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTF-RNRTVAVWNFR-GELVTSFED 358 (411)
Q Consensus 282 ~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-qlFlSf-sd~tI~iWn~~-Gel~~s~e~ 358 (411)
+|..+...++.++....+..|++||+.+++......+..+|..++.++... +.++++ .|++|++||++ |+++.++.+
T Consensus 215 ~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 294 (435)
T 1p22_A 215 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNG 294 (435)
T ss_dssp CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcC
Confidence 999999999989999999999999999998775555778899888888765 667777 79999999999 999999999
Q ss_pred ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 359 HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 359 H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|.. .+..+.. +++++++|+.|. +|++||+.+|+++
T Consensus 295 ~~~-----~v~~~~~--~~~~l~~g~~dg----------~i~iwd~~~~~~~ 329 (435)
T 1p22_A 295 HKR-----GIACLQY--RDRLVVSGSSDN----------TIRLWDIECGACL 329 (435)
T ss_dssp CSS-----CEEEEEE--ETTEEEEEETTS----------CEEEEETTTCCEE
T ss_pred CCC-----cEEEEEe--CCCEEEEEeCCC----------eEEEEECCCCCEE
Confidence 987 5655555 789999999987 9999999999875
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.81 E-value=1.5e-17 Score=145.84 Aligned_cols=257 Identities=11% Similarity=0.090 Sum_probs=185.9
Q ss_pred hccccceeeecccccEEEEEeC-CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeec
Q 015220 112 AQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESE 190 (411)
Q Consensus 112 ~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~ 190 (411)
+.-|....||..||+.+..+.. .+...|.++-++...+.|++.| .|. .++.- ++..|+ ++..
T Consensus 42 g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs---~Dg--~v~iw-----~~~~~~-----~~~~-- 104 (318)
T 4ggc_A 42 ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---SSA--EVQLW-----DVQQQK-----RLRN-- 104 (318)
T ss_dssp EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---TTS--EEEEE-----ETTTTE-----EEEE--
T ss_pred EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE---CCC--cEEEe-----ecCCce-----eEEE--
Confidence 4467789999999998888875 5677899999999888777643 222 22222 222222 1221
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce-EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecC
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t 266 (411)
.-.|.+.+..-..++..|++...++..++|+..+.. .+..+..+ .+..+..+ +|.+|+...... .|+||++.+
T Consensus 105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~---~i~iwd~~~ 181 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN---LVNVWPSAP 181 (318)
T ss_dssp EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEESSC
T ss_pred ecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc---ceeEEECCC
Confidence 123555666666778999999999999999998854 55666644 77888888 777777655443 489999999
Q ss_pred CcEEeEee-eccccCCcceeeeeecce--e-EEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEE
Q 015220 267 GTVLKSFN-HLLHRNKKVDFIEQFNEK--L-LVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLT 337 (411)
Q Consensus 267 G~~L~t~~-~LL~h~K~I~FLE~~~ek--l-lIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlS 337 (411)
|+...... ....+..+|..+..++.. + .+. +.+..|++||..+++..... .+...+..+... +.+++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV----DAHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE----ECSSCEEEEEEETTTTEEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc----cceeeeeeeeecccccceEE
Confidence 98654322 345667788888776543 2 233 35578999999999887632 233444443333 33333
Q ss_pred --E-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 338 --F-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 338 --f-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+ .|++|+|||++ |+++.+|++|.. .++.+.++|||.+|+|||.|. +|+|||+..+
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~-----~V~~l~~spdg~~l~S~s~D~----------~v~iWd~~~~ 316 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTS-----RVLSLTMSPDGATVASAAADE----------TLRLWRCFEL 316 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSCEEEEETTT----------EEEEECCSCC
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCC-----CEEEEEEcCCCCEEEEEecCC----------eEEEEECCCC
Confidence 3 68999999999 999999999998 899999999999999999997 9999999765
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.81 E-value=8.6e-18 Score=160.73 Aligned_cols=277 Identities=13% Similarity=0.120 Sum_probs=198.8
Q ss_pred ceEEEeeccc---eehhhhccccceeeecccccEEEEEeC---CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEee
Q 015220 97 KIIEIVAARD---IVFALAQSGVCAAFCRETNQRICFLNV---TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRST 170 (411)
Q Consensus 97 ~V~EIv~a~d---ii~~L~~sG~c~af~~~t~~~ic~lN~---s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~ 170 (411)
.|..+-...| ++++-...|....||..+++.+..+.. .+..-|.++-++ ..+.|++.+ .|. .++.-
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~---~d~--~i~~w-- 279 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVG---ADA--TIRVW-- 279 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEE---TTS--EEEEE--
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEc---CCC--cEEEE--
Confidence 5777776644 788888899999999999999999955 778889999998 555555533 222 22222
Q ss_pred ehhhhhhCCCCCCCcceeec---ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeE-------
Q 015220 171 RIEYIRRGKPDAGFALFESE---SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQE------- 238 (411)
Q Consensus 171 ~~~~i~~gk~~~~~~LF~~~---~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~Vqe------- 238 (411)
+++.|+.- .-|... .-..+--+.|. +|..++....++.+++||+.+.+++.++..+ .|..
T Consensus 280 ---d~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~ 351 (615)
T 1pgu_A 280 ---DVTTSKCV---QKWTLDKQQLGNQQVGVVAT--GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLI 351 (615)
T ss_dssp ---ETTTTEEE---EEEECCTTCGGGCEEEEEEE--ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTE
T ss_pred ---ECCCCcEE---EEEcCCCCcccCceeEEEeC--CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcE
Confidence 12222110 001100 00111123343 7888888889999999999998888887643 3333
Q ss_pred --------------------------EEEeCCEEEEEEecCC-------------------------------CceeeEE
Q 015220 239 --------------------------IKISPGIMLLIFTKAS-------------------------------GHVPLKI 261 (411)
Q Consensus 239 --------------------------IkISdG~~Lai~q~t~-------------------------------~~ipiKI 261 (411)
+.++++.+|++..... ..-.+.+
T Consensus 352 ~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 431 (615)
T 1pgu_A 352 SGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLI 431 (615)
T ss_dssp EEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEE
T ss_pred EECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEE
Confidence 3333233333222111 2234567
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeecceeEEeec-CceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEE
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE-NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLT 337 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe-~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlS 337 (411)
|++.+|+.+.++ .+..++..++.+++.++.... +..|++||+.+++... .+...|+..+..++.+ +++++
T Consensus 432 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~ 505 (615)
T 1pgu_A 432 LQSFTGDIIKSV----RLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAA 505 (615)
T ss_dssp EETTTCCEEEEE----ECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEE
T ss_pred EeccCCceeeec----ccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEE
Confidence 777788888874 467889999999777778888 9999999999998764 4777899999999986 67777
Q ss_pred E-ecCeEEEEecC-Cceeeeecc-ccccCCCCccceEEEcC----------CCCEEEEEecCCCCCccccCCceEEEeee
Q 015220 338 F-RNRTVAVWNFR-GELVTSFED-HLLWHPDCNTNNIYITS----------DQDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 338 f-sd~tI~iWn~~-Gel~~s~e~-H~~~~~~c~~n~i~Is~----------Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
+ .|++|++||+. |+++.++.+ |.. .++.+..+| |+++|++++.|. +|.|||+
T Consensus 506 ~~~dg~i~iw~~~~~~~~~~~~~~h~~-----~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg----------~i~iw~~ 570 (615)
T 1pgu_A 506 GDVMGKILLYDLQSREVKTSRWAFRTS-----KINAISWKPAEKGANEEEIEEDLVATGSLDT----------NIFIYSV 570 (615)
T ss_dssp EETTSCEEEEETTTTEEEECCSCCCSS-----CEEEEEECCCC------CCSCCEEEEEETTS----------CEEEEES
T ss_pred cCCCCeEEEeeCCCCcceeEeecCCCC-----ceeEEEEcCccccccccccCCCEEEEEcCCC----------cEEEEEC
Confidence 7 78999999998 999999999 987 899999999 999999999997 9999999
Q ss_pred cce-eee
Q 015220 405 MFV-TCK 410 (411)
Q Consensus 405 ~tG-k~~ 410 (411)
.+| +++
T Consensus 571 ~~~~~~~ 577 (615)
T 1pgu_A 571 KRPMKII 577 (615)
T ss_dssp SCTTCCE
T ss_pred CCCceec
Confidence 998 543
No 60
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.81 E-value=1.1e-18 Score=159.52 Aligned_cols=187 Identities=15% Similarity=0.155 Sum_probs=150.8
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCce--EEEEeccC--ceeEEEEe-C--CEEEEEEecCCCceeeEEEEecCCc--
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISDK--NVQEIKIS-P--GIMLLIFTKASGHVPLKILSIEDGT-- 268 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys--~iysLs~~--~VqeIkIS-d--G~~Lai~q~t~~~ipiKIl~I~tG~-- 268 (411)
+.|+ ++|+.|+.++.|+++||||+++.+ ++.++.++ .|..+..+ | |.+|+....-. -|+||++++|+
T Consensus 19 v~~s-~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~---~v~iWd~~~~~~~ 94 (316)
T 3bg1_A 19 AQMD-YYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR---KVIIWREENGTWE 94 (316)
T ss_dssp EEEC-GGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS---CEEEECCSSSCCC
T ss_pred eeEc-CCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC---EEEEEECCCCcce
Confidence 4676 689999999999999999999865 57788765 89999997 3 78888776443 38999999995
Q ss_pred EEeEeeeccccCCcceeeeeecc--e--eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec------------
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNE--K--LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN------------ 332 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~e--k--llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s------------ 332 (411)
.+.+ +-+|..+|..+..+++ + +...+.+..|++||+.++....+..+.-+|...+..+..+
T Consensus 95 ~~~~---~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 95 KSHE---HAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp EEEE---ECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------C
T ss_pred EEEE---ccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccc
Confidence 4444 5689999999999986 3 3455678999999999876555445666677666555432
Q ss_pred --------eeEEEE-ecCeEEEEecC-C---ceeeeeccccccCCCCccceEEEcCCC----CEEEEEecCCCCCccccC
Q 015220 333 --------QLFLTF-RNRTVAVWNFR-G---ELVTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYCKADSDDPLAEG 395 (411)
Q Consensus 333 --------qlFlSf-sd~tI~iWn~~-G---el~~s~e~H~~~~~~c~~n~i~Is~Dq----d~iiS~~~d~~~~~~~~~ 395 (411)
++|+|+ .|++|++||++ + .++.+|++|.. .++.+..+||+ .+|+|+|.|.
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~-----~V~~v~~sp~~~~~~~~las~s~D~-------- 238 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD-----WVRDVAWAPSIGLPTSTIASCSQDG-------- 238 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS-----CEEEEECCCCSSCSCCEEEEEETTC--------
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC-----ceEEEEecCCCCCCCceEEEEcCCC--------
Confidence 478888 79999999998 3 37789999998 79999999997 8999999997
Q ss_pred CceEEEeeecc
Q 015220 396 NGKLFVSLLMF 406 (411)
Q Consensus 396 ~gtI~i~~i~t 406 (411)
+|+|||+.+
T Consensus 239 --~v~iw~~~~ 247 (316)
T 3bg1_A 239 --RVFIWTCDD 247 (316)
T ss_dssp --EEEEEECSS
T ss_pred --eEEEEEccC
Confidence 999999987
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.8e-18 Score=157.84 Aligned_cols=266 Identities=14% Similarity=0.114 Sum_probs=190.7
Q ss_pred hccccceeeecccccEE-EEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceee-
Q 015220 112 AQSGVCAAFCRETNQRI-CFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFES- 189 (411)
Q Consensus 112 ~~sG~c~af~~~t~~~i-c~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~- 189 (411)
...|....||..+++.. +........-|.++-++....-|++.+ .|. .++...+ +....|. .++..-
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg--~v~vw~~--~~~~~~~----~~~~~~~ 110 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL---DNG--SLELYST--NEANNAI----NSMARFS 110 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE---SSS--CEEEECC--SSTTSCC----CEEEECC
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc---cCC--eEEEeec--ccccccc----cchhhcc
Confidence 56678899998887632 233335677899999988777665533 222 2222222 1111110 111111
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce------EEEEe---c--cCceeEEEEe-C-CEEEEEEecCCCc
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT------MLYSI---S--DKNVQEIKIS-P-GIMLLIFTKASGH 256 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys------~iysL---s--~~~VqeIkIS-d-G~~Lai~q~t~~~ 256 (411)
..-...--+.|...++..|+....|++++|||+.+.+ ..+.+ . ...|..+.++ + +.+|++....
T Consensus 111 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 187 (416)
T 2pm9_A 111 NHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS--- 187 (416)
T ss_dssp CSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS---
T ss_pred CCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC---
Confidence 0111223477877668999999999999999999987 44444 2 3389999999 4 5777765443
Q ss_pred eeeEEEEecCCcEEeEeeec---cccCCcceeeeeecce--e-EEeecCc---eeeEEEcccc-eEEEeecccc-CCCce
Q 015220 257 VPLKILSIEDGTVLKSFNHL---LHRNKKVDFIEQFNEK--L-LVKQENE---NLQILDVRNF-ELTEVSRTEF-MTPSA 325 (411)
Q Consensus 257 ipiKIl~I~tG~~L~t~~~L---L~h~K~I~FLE~~~ek--l-lIKQe~~---~LkI~dL~t~-e~~~v~~T~f-~hpsA 325 (411)
-.|+||++.+++.+.++... .+|..+|..+..++++ + +...++. .|++||+.++ +... +.. .|...
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~---~~~~~~~~~ 264 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ---TLNQGHQKG 264 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB---CCCSCCSSC
T ss_pred CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE---EeecCccCc
Confidence 34999999999999985521 1227899999999975 3 4455565 9999999997 4443 454 68888
Q ss_pred EEEEeec----eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCC-CEEEEEecCCCCCccccCCce
Q 015220 326 FIFLYEN----QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYCKADSDDPLAEGNGK 398 (411)
Q Consensus 326 fifLy~s----qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq-d~iiS~~~d~~~~~~~~~~gt 398 (411)
+..+..+ +++++. .|++|++||++ |+++.++.+|.. .+..+..+||+ .+|++++.|. +
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~~l~s~~~d~----------~ 329 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN-----WCFKTKFAPEAPDLFACASFDN----------K 329 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS-----CCCCEEECTTCTTEEEECCSSS----------E
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC-----ceEEEEECCCCCCEEEEEecCC----------c
Confidence 8888764 678888 78999999999 999999999988 78999999999 8999999997 9
Q ss_pred EEEeeecceee
Q 015220 399 LFVSLLMFVTC 409 (411)
Q Consensus 399 I~i~~i~tGk~ 409 (411)
|+|||+.+++.
T Consensus 330 i~iw~~~~~~~ 340 (416)
T 2pm9_A 330 IEVQTLQNLTN 340 (416)
T ss_dssp EEEEESCCCCC
T ss_pred EEEEEccCCCC
Confidence 99999998874
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.6e-18 Score=155.90 Aligned_cols=287 Identities=9% Similarity=0.094 Sum_probs=198.9
Q ss_pred cccceEEEeec--cceehhhhccccceeeeccc----ccEEEEEeCCCCceEEEEEeecC-CCeEEEEEeEecCCCceee
Q 015220 94 KRSKIIEIVAA--RDIVFALAQSGVCAAFCRET----NQRICFLNVTADEVIRSLFYNKN-NDSLITVSVYASDNFSSLR 166 (411)
Q Consensus 94 ~RS~V~EIv~a--~dii~~L~~sG~c~af~~~t----~~~ic~lN~s~~evIrsifyN~~-n~slI~vSv~~sd~~s~L~ 166 (411)
...+|..+-.. ..++++-...|....||..+ .+.+..+. .+..-|.++-++.. .+-|++.| .|.
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~---~dg----- 136 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGG---NNG----- 136 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEEC---SSS-----
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEc---CCC-----
Confidence 34567777665 34666667789999999887 34555655 45566788888887 44444422 222
Q ss_pred eEeeehhhhhhCCCCC-CCcceee-cccC---CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--------
Q 015220 167 CRSTRIEYIRRGKPDA-GFALFES-ESLK---WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-------- 233 (411)
Q Consensus 167 cr~~~~~~i~~gk~~~-~~~LF~~-~~l~---~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~-------- 233 (411)
.+.+=++..++... ....+.. .... ..--+.|...++..|+.+..|++++|||+++.+++.++..
T Consensus 137 --~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 214 (416)
T 2pm9_A 137 --EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIK 214 (416)
T ss_dssp --CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCC
T ss_pred --eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccC
Confidence 12222333332100 0011111 1111 2335788777789999999999999999999999988884
Q ss_pred CceeEEEEe-CC-EEEEEEecCCCceeeEEEEecCC-cEEeEeeecc-ccCCcceeeeeec-ce--eEEeecCceeeEEE
Q 015220 234 KNVQEIKIS-PG-IMLLIFTKASGHVPLKILSIEDG-TVLKSFNHLL-HRNKKVDFIEQFN-EK--LLVKQENENLQILD 306 (411)
Q Consensus 234 ~~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~tG-~~L~t~~~LL-~h~K~I~FLE~~~-ek--llIKQe~~~LkI~d 306 (411)
..|..+.++ +| .+|++.......-.|+||++.++ +++.. +- +|..+|..+..++ +. ++....+..|++||
T Consensus 215 ~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd 291 (416)
T 2pm9_A 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT---LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN 291 (416)
T ss_dssp CCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC---CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEEC
T ss_pred CceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE---eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEee
Confidence 469999999 44 57777766555557999999998 56665 44 7999999999986 44 35555788999999
Q ss_pred cccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-Cceeeeecc--------------------cc
Q 015220 307 VRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR-GELVTSFED--------------------HL 360 (411)
Q Consensus 307 L~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~-Gel~~s~e~--------------------H~ 360 (411)
+.+++... +.-.|...+..++.+ +++++. .|++|++|+++ +....+.++ |.
T Consensus 292 ~~~~~~~~---~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (416)
T 2pm9_A 292 PESAEQLS---QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESK 368 (416)
T ss_dssp SSSCCEEE---EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CC
T ss_pred CCCCccce---eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccc
Confidence 99999887 666777777777765 578888 79999999998 554444333 11
Q ss_pred -----------ccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 361 -----------LWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 361 -----------~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.|+. ..+..+..||||++|++++.|. +|+|||+.|++
T Consensus 369 ~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~la~~~~d~----------~v~~w~~~~~~ 416 (416)
T 2pm9_A 369 EKPSVFHLQAPTWYG-EPSPAAHWAFGGKLVQITPDGK----------GVSITNPKISG 416 (416)
T ss_dssp SCCCSSCCCCCSTTC-CCSCCCEEETTTEEECBCTTSS----------CBCCBCCCCC-
T ss_pred cccccccccCCcccc-CCccceEEeeCCeEEEEeCCCC----------eEEEEEeccCC
Confidence 1122 2456889999999999999887 99999999864
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2.1e-17 Score=149.34 Aligned_cols=275 Identities=12% Similarity=0.126 Sum_probs=200.3
Q ss_pred ccceEEEeec--cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 95 RSKIIEIVAA--RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 95 RS~V~EIv~a--~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
...|..+... ..++++-...|....|| .+++.+..+.. +..-|.++-++..+..|++.+. |. .++. .++
T Consensus 108 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~--~i~i--wd~ 178 (425)
T 1r5m_A 108 TNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGTHIISMDV---EN--VTIL--WNV 178 (425)
T ss_dssp CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSSEEEEEET---TC--CEEE--EET
T ss_pred CCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCCEEEEEec---CC--eEEE--EEC
Confidence 3477777766 44777778889999999 77888887764 5567899999988877776442 22 2222 211
Q ss_pred hhhhhCCCCCCCcceeec-----------ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEE
Q 015220 173 EYIRRGKPDAGFALFESE-----------SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEI 239 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~-----------~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeI 239 (411)
..|+.-.....-... .-...--+.|.+ +++ ++....++.+++||+++.+++..+..+ .|..+
T Consensus 179 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 179 ---ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDK-FVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp ---TTTEEEEEECCC---------------CCCBSCCEEEE-TTE-EEEECGGGCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred ---CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCE-EEEEcCCCeEEEEEcCCCceeeeeccCCCceEEE
Confidence 111110000000000 000022234443 455 666778999999999999988888744 89999
Q ss_pred EEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce-eEEeecCceeeEEEcccceEEEeec
Q 015220 240 KIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNFELTEVSR 317 (411)
Q Consensus 240 kIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek-llIKQe~~~LkI~dL~t~e~~~v~~ 317 (411)
.++ +|.+|++.... -.|+||++.+++.+.. +-+|..+|..+..++++ ++....+..|++||+.+++...
T Consensus 254 ~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--- 324 (425)
T 1r5m_A 254 EFNDTNKLLLSASDD---GTLRIWHGGNGNSQNC---FYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA--- 324 (425)
T ss_dssp EEETTTTEEEEEETT---SCEEEECSSSBSCSEE---ECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE---
T ss_pred EECCCCCEEEEEcCC---CEEEEEECCCCccceE---ecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE---
Confidence 999 77777776543 3589999999999998 45788999999999885 4666788999999999999887
Q ss_pred cccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cc--------------------eeeeeccccccCCCCccceEE
Q 015220 318 TEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GE--------------------LVTSFEDHLLWHPDCNTNNIY 372 (411)
Q Consensus 318 T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Ge--------------------l~~s~e~H~~~~~~c~~n~i~ 372 (411)
+...|...+..+..+ +++++. .|++|.+||++ ++ ++.++.+|.. .+.++.+.
T Consensus 325 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~ 401 (425)
T 1r5m_A 325 LSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD---NDYIFDLS 401 (425)
T ss_dssp EEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTC---CCCEEEEE
T ss_pred ecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc---CCceEEEE
Confidence 555677778777765 667777 78999999999 88 8999999844 11689999
Q ss_pred EcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 373 ITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 373 Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
.+||+++|++++.|. +|.|||+.
T Consensus 402 ~s~~~~~l~~~~~dg----------~i~iw~~~ 424 (425)
T 1r5m_A 402 WNCAGNKISVAYSLQ----------EGSVVAIP 424 (425)
T ss_dssp ECTTSSEEEEEESSS----------CCEEEECC
T ss_pred ccCCCceEEEEecCc----------eEEEEeec
Confidence 999999999999886 99999985
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.81 E-value=9.6e-18 Score=154.23 Aligned_cols=189 Identities=13% Similarity=0.097 Sum_probs=155.3
Q ss_pred eeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeec
Q 015220 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL 276 (411)
Q Consensus 200 FDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~L 276 (411)
+-.++|+.|+....|++++|||+.+.+.+..+..+ .|..+.++ +|.+|++..... -|+||++.+|+.+.+ +
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~---~i~iwd~~~~~~~~~---~ 177 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDM---QLKIWSVKDGSNPRT---L 177 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTCCCCEE---E
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCC---eEEEEeCCCCcCceE---E
Confidence 44678999999999999999999999999887654 89999999 888888766433 599999999999998 5
Q ss_pred cccCCcceeeeeeccee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEee-----------------------
Q 015220 277 LHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE----------------------- 331 (411)
Q Consensus 277 L~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~----------------------- 331 (411)
-+|..+|..+..++++- +....+..+++||+.+++....-.....+...+..+..
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 58999999999998754 55567889999999999988854444445555555543
Q ss_pred -ceeEEEE-ecCeEEEEecC-Cceeeeec-cccccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEEEeeecc
Q 015220 332 -NQLFLTF-RNRTVAVWNFR-GELVTSFE-DHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 332 -sqlFlSf-sd~tI~iWn~~-Gel~~s~e-~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
.+.++++ .|++|++||++ |+.+..+. +|.. .+..+..+||++ +|++|+.|. +|++||+.+
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~g~~dg----------~i~vwd~~~ 322 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC-----SCNSLTVDGNNANYIYAGYENG----------MLAQWDLRS 322 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS-----CEEEEEECSSCTTEEEEEETTS----------EEEEEETTC
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCC-----CceeEEEeCCCCCEEEEEeCCC----------eEEEEEcCC
Confidence 2567777 89999999999 88777664 4655 899999999999 999999986 999999999
Q ss_pred eee
Q 015220 407 VTC 409 (411)
Q Consensus 407 Gk~ 409 (411)
|++
T Consensus 323 ~~~ 325 (420)
T 3vl1_A 323 PEC 325 (420)
T ss_dssp TTS
T ss_pred CcC
Confidence 865
No 65
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.81 E-value=2e-17 Score=154.38 Aligned_cols=188 Identities=11% Similarity=0.082 Sum_probs=149.9
Q ss_pred CCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEeCCEEEEEEecCCCceeeEEEEecCC-cEEeE
Q 015220 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKISPGIMLLIFTKASGHVPLKILSIEDG-TVLKS 272 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG-~~L~t 272 (411)
-+.+++...+..+.+.++.|++++|||+++.+++.++... .|..+++++..+++..+. .++||++.++ +.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~-----~i~i~d~~~~~~~~~~ 135 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGD-----VISVFKFGNPWKRITD 135 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETT-----EEEEEESSTTCCBSSC
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcC-----EEEEEECCCCceeeEE
Confidence 4567777666666667778899999999999999988855 899999996665554432 4899999999 88887
Q ss_pred eeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEE-------------eeccccCCCceEEEEeec---ee
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTE-------------VSRTEFMTPSAFIFLYEN---QL 334 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~-------------v~~T~f~hpsAfifLy~s---ql 334 (411)
+.. +.....+.+..+.+. ..+..|++||+.+++... ...++.+|...+.+++.+ ++
T Consensus 136 ~~~------~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~ 209 (355)
T 3vu4_A 136 DIR------FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM 209 (355)
T ss_dssp CEE------EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSE
T ss_pred ecc------CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE
Confidence 443 455566677666664 577899999999876110 013677899999999987 77
Q ss_pred EEEE-ecCe-EEEEecC-Cceeeeec-c-ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 335 FLTF-RNRT-VAVWNFR-GELVTSFE-D-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 335 FlSf-sd~t-I~iWn~~-Gel~~s~e-~-H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
++|+ .|++ |++||++ |+++.+|. + |.. .++.+..+|||.+|+|++.|. +|+|||+.+++
T Consensus 210 l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-----~v~~~~~s~~~~~l~s~s~d~----------~v~iw~~~~~~ 273 (355)
T 3vu4_A 210 VATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-----DVVDMKWSTDGSKLAVVSDKW----------TLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTCSEEEEEETTTCCEEEEEECTTCCS-----CEEEEEECTTSCEEEEEETTC----------EEEEEESSCCS
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-----cEEEEEECCCCCEEEEEECCC----------EEEEEEccCCC
Confidence 8888 7888 9999999 99999998 5 887 899999999999999999997 99999998764
No 66
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.80 E-value=1.4e-17 Score=152.64 Aligned_cols=190 Identities=15% Similarity=0.084 Sum_probs=148.0
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-----ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-----~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
-+.|...++..|++.+.|++++|||+++ +.+..+... .|..+.++ +|.+|++.... -.|+||++ +|+.+
T Consensus 123 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~-~~~~~ 197 (383)
T 3ei3_B 123 GMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGL-DGHEI 197 (383)
T ss_dssp EEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEET-TSCEE
T ss_pred EEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEEC-CCCEE
Confidence 4678777899999999999999999997 566666543 49999999 88888877654 47999999 78888
Q ss_pred eEeeeccccCCcceeeeeecce---eEEeecCceeeEEEccc----ceEEEeeccccCCCceEEEEeec----eeEEEE-
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEK---LLVKQENENLQILDVRN----FELTEVSRTEFMTPSAFIFLYEN----QLFLTF- 338 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ek---llIKQe~~~LkI~dL~t----~e~~~v~~T~f~hpsAfifLy~s----qlFlSf- 338 (411)
.+ +.+|..+|..+..++++ ++....+..|+|||+.+ ++... +. .|...+..+..+ +.+++.
T Consensus 198 ~~---~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~---~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 198 FK---EKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIA---EM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp EE---EECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEE---EE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred EE---eccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEE---Ee-cCCCceEEEEEcCCCCCEEEEEc
Confidence 88 56899999999999986 34556788999999999 55654 33 588888888865 467777
Q ss_pred ecCeEEEEecC-Cceeeeeccccc------------cCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 339 RNRTVAVWNFR-GELVTSFEDHLL------------WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 339 sd~tI~iWn~~-Gel~~s~e~H~~------------~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
.|++|++||++ |+.+.++.+|.. |+|+...-.+..+|||.+ +++.| |+|.|||+.
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d----------~~i~iwd~~ 338 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDK----------RTIDIYDAN 338 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCC----------CCEEEEETT
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCC----------CeEEEEecC
Confidence 78999999999 999999988863 333334444555555555 44444 599999999
Q ss_pred ceeee
Q 015220 406 FVTCK 410 (411)
Q Consensus 406 tGk~~ 410 (411)
+|+++
T Consensus 339 ~~~~~ 343 (383)
T 3ei3_B 339 SGGLV 343 (383)
T ss_dssp TCCEE
T ss_pred CCcee
Confidence 99975
No 67
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.9e-17 Score=152.20 Aligned_cols=180 Identities=14% Similarity=0.095 Sum_probs=141.7
Q ss_pred EEEeecCCCeEEEEEeeC--ceEEEEec-c-C--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecC-------CcEEeE
Q 015220 207 VLTYSAQDSIYKVFDLKN--YTMLYSIS-D-K--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIED-------GTVLKS 272 (411)
Q Consensus 207 iLt~~~~ds~ykVWdL~~--Ys~iysLs-~-~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t-------G~~L~t 272 (411)
.|+..+.|+++++||+++ ++.+..+. . + .|..+..+ +|.+|++..... -|+||++++ ++++.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~---~v~iw~~~~~~~~~~~~~~~~~ 102 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS---TVSIWAKEESADRTFEMDLLAI 102 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS---CEEEEEC-------CCCEEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC---cEEEEEcccCcCccccceeEEE
Confidence 888999999999999987 46777773 2 2 79999999 888888876543 489999964 345555
Q ss_pred eeeccccCCcceeeeeecceeEEe--ecCceeeEEEccc-ceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAV 345 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t-~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~i 345 (411)
+-+|..+|..+..++++.+|. +.+..++|||+.+ ++..+...++.+|...+..+..+ ++++|. .|++|++
T Consensus 103 ---~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~i 179 (330)
T 2hes_X 103 ---IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI 179 (330)
T ss_dssp ---EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ---EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence 668999999999998876555 4689999999953 33323233677899999998876 678888 7999999
Q ss_pred EecC-C--ceeeeeccccccCCCCccceEEEcCC--CCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 346 WNFR-G--ELVTSFEDHLLWHPDCNTNNIYITSD--QDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 346 Wn~~-G--el~~s~e~H~~~~~~c~~n~i~Is~D--qd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
|+.+ + +.+.+|.+|.. .+..+..+|| +..|+|++.|. +|+|||+.++
T Consensus 180 W~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~s~D~----------~v~iw~~~~~ 231 (330)
T 2hes_X 180 WKDYDDDWECVAVLNGHEG-----TVWSSDFDKTEGVFRLCSGSDDS----------TVRVWKYMGD 231 (330)
T ss_dssp EEEETTEEEEEEEECCCSS-----CEEEEEECCSSSSCEEEEEETTS----------CEEEEEEEEE
T ss_pred EECCCCCeeEEEEccCCCC-----cEEEEEecCCCCeeEEEEEeCCC----------eEEEEEecCC
Confidence 9987 5 58889999998 7999999999 77999999997 9999999887
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.79 E-value=1.9e-16 Score=141.98 Aligned_cols=273 Identities=8% Similarity=0.022 Sum_probs=193.8
Q ss_pred ceEEEeec--cceehhhhccccceeeeccccc--EEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 97 KIIEIVAA--RDIVFALAQSGVCAAFCRETNQ--RICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 97 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~--~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
+|..+... ..++++-...|....||..+++ .+..+. .+..-|.++-++...+.|++.| .|. .++.-.+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~---~dg--~i~vwd~-- 81 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCG---TDR--NAYVWTL-- 81 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEE---TTS--CEEEEEE--
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEc---CCC--eEEEEEC--
Confidence 34444433 2356666678999999999988 555665 4666889999999777776644 222 2333322
Q ss_pred hhhhhCCCCCCCcceeecccCCC---CeEEeeCCCCeEEEeecCCCeEEEEEeeCceE---EEEec---cCceeEEEEe-
Q 015220 173 EYIRRGKPDAGFALFESESLKWP---GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSIS---DKNVQEIKIS- 242 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~l~~P---gfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~---iysLs---~~~VqeIkIS- 242 (411)
..++ .........+. -.+.|. ++|+.|+....++.++|||+.+.+. +..+. ...|..+.++
T Consensus 82 ---~~~~-----~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 82 ---KGRT-----WKPTLVILRINRAARCVRWA-PNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp ---ETTE-----EEEEEECCCCSSCEEEEEEC-TTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT
T ss_pred ---CCCe-----eeeeEEeecCCCceeEEEEC-CCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC
Confidence 1111 01111111222 245665 4788999999999999999999762 34442 3489999999
Q ss_pred CCEEEEEEecCCCceeeEEEEe------------------cCCcEEeEeeeccccCCcceeeeeecce--eEEeecCcee
Q 015220 243 PGIMLLIFTKASGHVPLKILSI------------------EDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQENENL 302 (411)
Q Consensus 243 dG~~Lai~q~t~~~ipiKIl~I------------------~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQe~~~L 302 (411)
+|.+|++.... -.++||++ .+|+++.+ +-+|..+|..+..++++ ++....+..|
T Consensus 153 ~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 153 NSVLLAAGSCD---FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp TSSEEEEEETT---SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE---CCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred CCCEEEEEcCC---CCEEEEEcccccccccccccccccccchhhheEe---cCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 78888776543 35799994 58899988 55889999999998875 4556688899
Q ss_pred eEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEecCeEEEEecCC-----cee---------------------
Q 015220 303 QILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFRNRTVAVWNFRG-----ELV--------------------- 353 (411)
Q Consensus 303 kI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfsd~tI~iWn~~G-----el~--------------------- 353 (411)
++||+.+++... +.-.|...+..++.+ ++++++.|++|.+|+++. .++
T Consensus 227 ~i~d~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (372)
T 1k8k_C 227 CLADADKKMAVA---TLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 303 (372)
T ss_dssp EEEEGGGTTEEE---EEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHH
T ss_pred EEEECCCCceeE---EEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhh
Confidence 999999999887 555677677776655 778888999999999985 222
Q ss_pred ---------------eee-ccccccCCCCccceEE-EcCCC---CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 354 ---------------TSF-EDHLLWHPDCNTNNIY-ITSDQ---DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 354 ---------------~s~-e~H~~~~~~c~~n~i~-Is~Dq---d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
..+ .+|.. .++.+. .++|| .+|+|++.|. +|+|||+.+|+-+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~g~~~~~l~s~~~Dg----------~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 304 NLDKKASSEGSAAAGAGLDSLHKN-----SVSQISVLSGGKAKCSQFCTTGMDG----------GMSIWDVRSLESA 365 (372)
T ss_dssp HCCCCC---------CCCSSSSSS-----CEEEEEEEESTTTSCSEEEEEETTS----------EEEEEEHHHHHHH
T ss_pred hcccccccccCccccccccccccC-----CcceeEEecCCCcceeeEEEecCCC----------ceEEEEecChhHh
Confidence 222 36666 788886 56888 9999999997 9999999998743
No 69
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.79 E-value=9.9e-17 Score=151.33 Aligned_cols=260 Identities=12% Similarity=0.109 Sum_probs=186.8
Q ss_pred hhhccccceeeecccccEEEEEeC-CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCccee
Q 015220 110 ALAQSGVCAAFCRETNQRICFLNV-TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE 188 (411)
Q Consensus 110 ~L~~sG~c~af~~~t~~~ic~lN~-s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~ 188 (411)
|.+.-+....||..||+.+..+.. .+...|.||=++...+-|++.| .|. .++. - ++..|+ ++..
T Consensus 120 Avgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs---~Dg--~v~i--W---d~~~~~-----~~~~ 184 (420)
T 4gga_A 120 AVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT---SSA--EVQL--W---DVQQQK-----RLRN 184 (420)
T ss_dssp EEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE---TTS--CEEE--E---ETTTTE-----EEEE
T ss_pred EEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE---CCC--eEEE--E---EcCCCc-----EEEE
Confidence 344567889999999998877775 5667899999999777666533 222 2222 2 222222 1211
Q ss_pred ecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce-EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEe
Q 015220 189 SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSI 264 (411)
Q Consensus 189 ~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I 264 (411)
.-.|.+.+---..|+..|+.+..|+++++||..... .+.++..+ .+..+..+ +|.+|+.....+ .++||++
T Consensus 185 --~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~---~v~i~~~ 259 (420)
T 4gga_A 185 --MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN---LVNVWPS 259 (420)
T ss_dssp --ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS---CEEEEES
T ss_pred --EeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccc---cceEEee
Confidence 112444444344578999999999999999998744 56667654 88888888 788777765443 5799999
Q ss_pred cCCcEEeE-eeeccccCCcceeeeeeccee-EEe----ecCceeeEEEcccceEEEeeccccCCCceEEEEeec----ee
Q 015220 265 EDGTVLKS-FNHLLHRNKKVDFIEQFNEKL-LVK----QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QL 334 (411)
Q Consensus 265 ~tG~~L~t-~~~LL~h~K~I~FLE~~~ekl-lIK----Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----ql 334 (411)
.+|+.... ......|...|..+..++..- ++. +.+..|++||+.+++... +.. +...+..+..+ ++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~---~~~-~~~~v~~~~~~~~~~~l 335 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS---AVD-AHSQVCSILWSPHYKEL 335 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE---EEE-CSSCEEEEEEETTTTEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce---eec-cccceeeeeecCCCCeE
Confidence 99875432 122567888898888876432 332 356899999999999887 333 33444444433 44
Q ss_pred EEEE--ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 335 FLTF--RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 335 FlSf--sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+++. .|++|.|||.+ |+++.+|.+|.. .+..+++||||++|+|||.|. +|+|||+.+..
T Consensus 336 v~~sg~~d~~I~iwd~~~~~~v~~l~gH~~-----~V~~l~~spdg~~l~S~s~D~----------tvriWdv~~~~ 397 (420)
T 4gga_A 336 ISGHGFAQNQLVIWKYPTMAKVAELKGHTS-----RVLSLTMSPDGATVASAAADE----------TLRLWRCFELD 397 (420)
T ss_dssp EEEECTTTCCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSCEEEEETTT----------EEEEECCSCSS
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEcCCCC-----CEEEEEEcCCCCEEEEEecCC----------eEEEEECCCCC
Confidence 4443 68999999999 999999999998 899999999999999999997 99999998754
No 70
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.6e-17 Score=146.91 Aligned_cols=188 Identities=14% Similarity=0.191 Sum_probs=153.2
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEee--CceEEEEeccC--ceeEEEEe-C--CEEEEEEecCCCceeeEEEEecCCc--
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLK--NYTMLYSISDK--NVQEIKIS-P--GIMLLIFTKASGHVPLKILSIEDGT-- 268 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~--~Ys~iysLs~~--~VqeIkIS-d--G~~Lai~q~t~~~ipiKIl~I~tG~-- 268 (411)
+.|+ ++|+.|+.++.|++++|||+. +.+++.++..+ .|..+..+ + |.+|++..... .|+||++.+|+
T Consensus 17 ~~~s-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~ 92 (379)
T 3jrp_A 17 AVLD-YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG---KVLIWKEENGRWS 92 (379)
T ss_dssp EEEC-SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS---CEEEEEEETTEEE
T ss_pred EEEc-CCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC---EEEEEEcCCCcee
Confidence 3454 578899999999999999999 77888888865 89999998 5 78888776543 58999999998
Q ss_pred EEeEeeeccccCCcceeeeeecc----eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec------------
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNE----KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN------------ 332 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~e----kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s------------ 332 (411)
.+.. +.+|..+|..+..+++ .++....+..|++||+.+++.... .+...|+..+..+..+
T Consensus 93 ~~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 93 QIAV---HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp EEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE-EEEECCTTCEEEEEECCCC---------
T ss_pred Eeee---ecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee-EEecCCCCceEEEEEcCccccccccccC
Confidence 5555 5678999999999987 467778899999999999843221 1445688888887753
Q ss_pred ----eeEEEE-ecCeEEEEecC-Cc----eeeeeccccccCCCCccceEEEcCC---CCEEEEEecCCCCCccccCCceE
Q 015220 333 ----QLFLTF-RNRTVAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKADSDDPLAEGNGKL 399 (411)
Q Consensus 333 ----qlFlSf-sd~tI~iWn~~-Ge----l~~s~e~H~~~~~~c~~n~i~Is~D---qd~iiS~~~d~~~~~~~~~~gtI 399 (411)
++++++ .|++|++||++ +. ++.++.+|.. .++.+..+|| +++|++++.|. +|
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~-----~v~~~~~sp~~~~~~~l~s~~~dg----------~i 233 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRDVAWSPTVLLRSYLASVSQDR----------TC 233 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-----CEEEEEECCCCSSSEEEEEEETTS----------CE
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccC-----cEeEEEECCCCCCCCeEEEEeCCC----------EE
Confidence 567777 79999999998 43 6678999988 8999999999 99999999987 99
Q ss_pred EEeeeccee
Q 015220 400 FVSLLMFVT 408 (411)
Q Consensus 400 ~i~~i~tGk 408 (411)
.|||+.+|+
T Consensus 234 ~iwd~~~~~ 242 (379)
T 3jrp_A 234 IIWTQDNEQ 242 (379)
T ss_dssp EEEEESSTT
T ss_pred EEEeCCCCC
Confidence 999999873
No 71
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.79 E-value=2.4e-17 Score=146.12 Aligned_cols=195 Identities=12% Similarity=0.131 Sum_probs=155.5
Q ss_pred CCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecC
Q 015220 193 KWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 193 ~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t 266 (411)
.|.+- +.|. ++|+.|+.+..|++++|||+.+.+++.++..+ .|..+.++ +|.+|++.... -.|+||++.+
T Consensus 30 ~h~~~v~~~~~s-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~~ 105 (369)
T 3zwl_B 30 GHERPLTQVKYN-KEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVSN 105 (369)
T ss_dssp CCSSCEEEEEEC-TTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETTT
T ss_pred EeeceEEEEEEc-CCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECCC
Confidence 35554 4565 48999999999999999999999999999855 89999999 78888776543 3699999999
Q ss_pred CcEEeEeeeccccCCcceeeeeecceeEEee--cC-----ceeeEEEcccceEEE--------eeccccCCCc--eEEEE
Q 015220 267 GTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ--EN-----ENLQILDVRNFELTE--------VSRTEFMTPS--AFIFL 329 (411)
Q Consensus 267 G~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ--e~-----~~LkI~dL~t~e~~~--------v~~T~f~hps--AfifL 329 (411)
|+.+.++. +..+|..+..++++.++.- .+ ..|++||+.+++... ...+...|+. .+..+
T Consensus 106 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 106 GQCVATWK----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp CCEEEEEE----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CcEEEEee----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99999844 6789999999988764433 44 799999999874311 0012233333 66666
Q ss_pred eec---eeEEEE-ecCeEEEEecC--CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 330 YEN---QLFLTF-RNRTVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 330 y~s---qlFlSf-sd~tI~iWn~~--Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
..+ +.++++ .|++|.+||++ +.++.++..|.. .+..+..+||+++|++++.|. +|.+||
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~----------~i~v~d 246 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSRDT----------NSFLVD 246 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETTS----------EEEEEE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecCCc----------eEEEEE
Confidence 655 566666 88999999999 689999999988 899999999999999999886 999999
Q ss_pred ecceeee
Q 015220 404 LMFVTCK 410 (411)
Q Consensus 404 i~tGk~~ 410 (411)
+.+|+++
T Consensus 247 ~~~~~~~ 253 (369)
T 3zwl_B 247 VSTLQVL 253 (369)
T ss_dssp TTTCCEE
T ss_pred CCCCcee
Confidence 9999875
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.78 E-value=2.6e-17 Score=151.37 Aligned_cols=263 Identities=15% Similarity=0.100 Sum_probs=184.5
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
...++.-...|....||..+++....+... +++...+++...+.|++.| .|. .++.. ++..++
T Consensus 68 g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~---~dg--~i~iw-----d~~~~~----- 130 (420)
T 3vl1_A 68 GSHLYKARLDGHDFLFNTIIRDGSKMLKRA--DYTAVDTAKLQMRRFILGT---TEG--DIKVL-----DSNFNL----- 130 (420)
T ss_dssp ETTEEEEEETTEEEEEECCSEETTTTSCSC--CEEEEEEECSSSCEEEEEE---TTS--CEEEE-----CTTSCE-----
T ss_pred CCeEEEEEcCCcEEEEEecccceeeEEecC--CceEEEEEecCCCEEEEEE---CCC--CEEEE-----eCCCcc-----
Confidence 445666666788888888777654444333 6777778887776666543 222 22222 122211
Q ss_pred cceeecccCCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCcee
Q 015220 185 ALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVP 258 (411)
Q Consensus 185 ~LF~~~~l~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ip 258 (411)
++- ..-.|++. +.|. ++|+.|++.+.|++++|||+.+.+++.++..+ .|..+.++ +|.+|++..... .
T Consensus 131 ~~~--~~~~h~~~v~~~~~~-~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---~ 204 (420)
T 3vl1_A 131 QRE--IDQAHVSEITKLKFF-PSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDG---T 204 (420)
T ss_dssp EEE--ETTSSSSCEEEEEEC-TTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTS---C
T ss_pred eee--ecccccCccEEEEEC-CCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCC---c
Confidence 110 11134443 4565 47889999999999999999999999888855 89999999 788777665443 5
Q ss_pred eEEEEecCCcEEeEeeeccccCCcceeee---------------------eecce--eEEeecCceeeEEEcccceEEEe
Q 015220 259 LKILSIEDGTVLKSFNHLLHRNKKVDFIE---------------------QFNEK--LLVKQENENLQILDVRNFELTEV 315 (411)
Q Consensus 259 iKIl~I~tG~~L~t~~~LL~h~K~I~FLE---------------------~~~ek--llIKQe~~~LkI~dL~t~e~~~v 315 (411)
|+||++.+|+.+.++...-.+..+|..+. .++++ ++....+..|++||+.+++....
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 89999999999999764444444444444 44554 45556788999999999987662
Q ss_pred eccccCCCceEEEEeec---e-eEEEE-ecCeEEEEecC-Cc-eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCC
Q 015220 316 SRTEFMTPSAFIFLYEN---Q-LFLTF-RNRTVAVWNFR-GE-LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 316 ~~T~f~hpsAfifLy~s---q-lFlSf-sd~tI~iWn~~-Ge-l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
..-.|...+..+..+ + +++++ .|++|++||++ |+ ++.++.+|.. ..++.++ ++|+.+|+|++.|.
T Consensus 285 --~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~----~~v~~~~-~~~~~~l~s~~~d~- 356 (420)
T 3vl1_A 285 --LPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEG----TPINNVY-FAAGALFVSSGFDT- 356 (420)
T ss_dssp --ECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTT----SCEEEEE-EETTEEEEEETTTE-
T ss_pred --cccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCC----CCceEEE-eCCCCEEEEecCCc-
Confidence 223477788888766 3 78888 78999999999 64 6889988644 2566664 56899999999886
Q ss_pred CCccccCCceEEEeeecce
Q 015220 389 DDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 389 ~~~~~~~~gtI~i~~i~tG 407 (411)
+|++||+.++
T Consensus 357 ---------~v~iw~~~~~ 366 (420)
T 3vl1_A 357 ---------SIKLDIISDP 366 (420)
T ss_dssp ---------EEEEEEECCT
T ss_pred ---------cEEEEeccCC
Confidence 9999998873
No 73
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=3.6e-16 Score=142.83 Aligned_cols=262 Identities=11% Similarity=0.073 Sum_probs=184.8
Q ss_pred eehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc
Q 015220 107 IVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFAL 186 (411)
Q Consensus 107 ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L 186 (411)
++++-...|...+||..+++.+..+.... -++++-++.....|.+++ ..|. . .+..+ +..|++ +
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~--~~d~--~--i~v~d---~~~~~~-----~ 67 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVAN--AHSN--D--VSIID---TATNNV-----I 67 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEE--GGGT--E--EEEEE---TTTTEE-----E
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEEC--CCCC--e--EEEEE---CCCCeE-----E
Confidence 34445567889999999999888887543 378999998777664422 1222 2 22222 222221 1
Q ss_pred eeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEe
Q 015220 187 FESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSI 264 (411)
Q Consensus 187 F~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I 264 (411)
-.-..-..|--+.|+.-+.++++.+..++.++|||+.+.+.+..+..+ .+..+.++ ||..|++.....+ -|++|++
T Consensus 68 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--~v~~~d~ 145 (391)
T 1l0q_A 68 ATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK--TVSVINT 145 (391)
T ss_dssp EEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT--EEEEEET
T ss_pred EEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC--EEEEEEC
Confidence 111111156677888655556677778899999999999999888755 89999999 7776655544333 6889999
Q ss_pred cCCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEE
Q 015220 265 EDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLT 337 (411)
Q Consensus 265 ~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlS 337 (411)
.+|+.+..+. ++ ..+..+..++++ +++. .++..|.+||+.+++..... .+......++.+ .++++
T Consensus 146 ~~~~~~~~~~---~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~ 217 (391)
T 1l0q_A 146 VTKAVINTVS---VG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV----KVEAAPSGIAVNPEGTKAYVT 217 (391)
T ss_dssp TTTEEEEEEE---CC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE----ECSSEEEEEEECTTSSEEEEE
T ss_pred CCCcEEEEEe---cC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE----ecCCCccceEECCCCCEEEEE
Confidence 9999998743 23 456788888776 3344 46688999999999887632 244555555554 34555
Q ss_pred E---ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEE-EEEecCCCCCccccCCceEEEeeecceeee
Q 015220 338 F---RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 338 f---sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
. .+++|.+||++ |+++.++..|.. ...+.++|||+.| ++++.|. +|.+||+.+|+++
T Consensus 218 ~~~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~s~~~d~----------~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 218 NVDKYFNTVSMIDTGTNKITARIPVGPD------PAGIAVTPDGKKVYVALSFXN----------TVSVIDTATNTIT 279 (391)
T ss_dssp EECSSCCEEEEEETTTTEEEEEEECCSS------EEEEEECTTSSEEEEEETTTT----------EEEEEETTTTEEE
T ss_pred ecCcCCCcEEEEECCCCeEEEEEecCCC------ccEEEEccCCCEEEEEcCCCC----------EEEEEECCCCcEE
Confidence 4 47999999999 899999988753 5789999999977 6766665 9999999999875
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.78 E-value=3.2e-17 Score=145.59 Aligned_cols=253 Identities=12% Similarity=0.120 Sum_probs=175.4
Q ss_pred ccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCC-
Q 015220 125 NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDV- 203 (411)
Q Consensus 125 ~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~- 203 (411)
-+.+..+..++..-|.++=++..+..+++++...+.+ ..++...+ ..|+. .++.....-..---+.|...
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d-~~v~iw~~-----~~~~~---~~~~~~~~~~~v~~~~~~~~~ 77 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGT-GVIQLYEI-----QHGDL---KLLREIEKAKPIKCGTFGATS 77 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCC-EEEEEEEE-----CSSSE---EEEEEEEESSCEEEEECTTCC
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCC-cEEEEEeC-----CCCcc---cceeeecccCcEEEEEEcCCC
Confidence 3445555566788888998888887777654332112 23333322 22211 01111111111123556555
Q ss_pred -CCeEEEeecCCCeEEEEEeeCce-EEEEeccC--ceeEEEE------e-CCEEEEEEecCCCceeeEEEEecCCc-EEe
Q 015220 204 -NGKVLTYSAQDSIYKVFDLKNYT-MLYSISDK--NVQEIKI------S-PGIMLLIFTKASGHVPLKILSIEDGT-VLK 271 (411)
Q Consensus 204 -NGkiLt~~~~ds~ykVWdL~~Ys-~iysLs~~--~VqeIkI------S-dG~~Lai~q~t~~~ipiKIl~I~tG~-~L~ 271 (411)
+|..|+....|+++++||+.+.+ ++..+..+ .|..+.. + +|.+|++..... .|+||++.+++ .+.
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~---~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG---TVKVWDPRQKDDPVA 154 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS---CEEEECTTSCSSCSE
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC---eEEEEeCCCCCCcce
Confidence 38999999999999999999988 88888755 7888854 4 677777765433 58999999998 677
Q ss_pred Eeeecccc-CCcceeee----e--ecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec------eeEEEE
Q 015220 272 SFNHLLHR-NKKVDFIE----Q--FNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN------QLFLTF 338 (411)
Q Consensus 272 t~~~LL~h-~K~I~FLE----~--~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s------qlFlSf 338 (411)
++...-++ ..++..+. . .+..++...++..|++||+.+++... ...|+..+..+..+ +.++++
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW----ETNIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEESCSSSSCCEEEEE
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee----ecCCCCceEEEEcCCCCCCCCEEEEE
Confidence 75432222 44777776 2 33444556678899999999999854 34567777777654 567777
Q ss_pred -ecCeEEEEecC-Cceeeeec-----cccccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 339 -RNRTVAVWNFR-GELVTSFE-----DHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 339 -sd~tI~iWn~~-Gel~~s~e-----~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.|++|.+||++ ++++.++. +|.. .+..+..+||+. ++++++.|. +|+|||+.+++
T Consensus 231 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~l~~~~~dg----------~i~iwd~~~~~ 293 (357)
T 3i2n_A 231 SLEGKFHVFDMRTQHPTKGFASVSEKAHKS-----TVWQVRHLPQNRELFLTAGGAG----------GLHLWKYEYPI 293 (357)
T ss_dssp ESTTEEEEEEEEEEETTTEEEEEEEECCSS-----CEEEEEEETTEEEEEEEEETTS----------EEEEEEEECCS
T ss_pred CCCCeEEEEeCcCCCcccceeeeccCCCcC-----CEEEEEECCCCCcEEEEEeCCC----------cEEEeecCCCc
Confidence 79999999999 77777666 8877 899999999999 899999986 99999998763
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.78 E-value=1.2e-16 Score=152.92 Aligned_cols=275 Identities=12% Similarity=0.105 Sum_probs=190.6
Q ss_pred ceEEEee-ccceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeee----
Q 015220 97 KIIEIVA-ARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR---- 171 (411)
Q Consensus 97 ~V~EIv~-a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~---- 171 (411)
.+..+.. ....+++-...|....||..+++.+..+.. +..-|.++-+ .. +++.| .|. .++.-.+.
T Consensus 300 ~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~-~~~~v~~~~~-~~---l~~~~---~dg--~i~~w~~~~~~~ 369 (615)
T 1pgu_A 300 QQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISG-HNKGITALTV-NP---LISGS---YDG--RIMEWSSSSMHQ 369 (615)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECC-CSSCEEEEET-TT---TEEEE---TTS--CEEETTTTEEEC
T ss_pred ceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeC-CCCCEEEEEe-cC---cEEEC---CCC--eEEEEEchhhcC
Confidence 3444443 467788888899999999999998888865 5556777777 43 44433 111 11111000
Q ss_pred -----h--------hhhhhCCCCCCCcceee---cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-
Q 015220 172 -----I--------EYIRRGKPDAGFALFES---ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK- 234 (411)
Q Consensus 172 -----~--------~~i~~gk~~~~~~LF~~---~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~- 234 (411)
+ ..|-.+-.+..-.++.. .....|--+.| .++|+.++.. .++.+++|++.+.+.+.++...
T Consensus 370 ~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~-s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 447 (615)
T 1pgu_A 370 DHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASA-NNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNS 447 (615)
T ss_dssp CCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEE-CSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSS
T ss_pred cccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEE-cCCCCEEEEe-CCCceEEEeccCCceeeecccCC
Confidence 0 00000000000001110 11112333444 3566666655 6777777877788888887754
Q ss_pred ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceE
Q 015220 235 NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFEL 312 (411)
Q Consensus 235 ~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~ 312 (411)
.+..+.++ |.+|++..... -.|++|++.+++... ..+.+|..+|..+..++++.++. ..+..|+|||+.+++.
T Consensus 448 ~~~~~~~~-~~~l~~~~~~d--~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 522 (615)
T 1pgu_A 448 PGSAVSLS-QNYVAVGLEEG--NTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 522 (615)
T ss_dssp CEEEEEEC-SSEEEEEETTT--SCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CceEEEEc-CCEEEEeecCC--CeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc
Confidence 88999999 77777766412 348999999998874 23678999999999998866554 4678999999999999
Q ss_pred EEeeccccC-CCceEEEEeec-------------eeEEEE-ecCeEEEEecC-C-ceeeeeccccccCCCCccceEEEcC
Q 015220 313 TEVSRTEFM-TPSAFIFLYEN-------------QLFLTF-RNRTVAVWNFR-G-ELVTSFEDHLLWHPDCNTNNIYITS 375 (411)
Q Consensus 313 ~~v~~T~f~-hpsAfifLy~s-------------qlFlSf-sd~tI~iWn~~-G-el~~s~e~H~~~~~~c~~n~i~Is~ 375 (411)
.. +... |...+..++.+ ++++++ .|++|++|+++ | .++.++.+|.. .++.+..+|
T Consensus 523 ~~---~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~-----~v~~l~~s~ 594 (615)
T 1pgu_A 523 KT---SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD-----GVNNLLWET 594 (615)
T ss_dssp EE---CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTT-----CEEEEEEEE
T ss_pred ee---EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCcc-----ceEEEEEcC
Confidence 87 6666 88888888863 467887 78999999999 5 79999999988 899999999
Q ss_pred CCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 376 DQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 376 Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
||. |+|++.|. +|+|||+.++
T Consensus 595 ~~~-l~s~~~d~----------~v~iw~~~~~ 615 (615)
T 1pgu_A 595 PST-LVSSGADA----------CIKRWNVVLE 615 (615)
T ss_dssp TTE-EEEEETTS----------CEEEEEEC--
T ss_pred CCC-eEEecCCc----------eEEEEeeecC
Confidence 999 99999997 9999999875
No 76
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.78 E-value=1.6e-16 Score=145.94 Aligned_cols=186 Identities=12% Similarity=0.117 Sum_probs=137.3
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEe----------
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSI---------- 264 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I---------- 264 (411)
+.|. ++|..|++.+.|++++|||+++.+++.++..+ .|..+.+| +|..|+...... -|+||++
T Consensus 82 ~~~~-~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~---~i~~wd~~~~~~~~~~~ 157 (343)
T 2xzm_R 82 LALS-QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAER---EIKLWNILGECKFSSAE 157 (343)
T ss_dssp EEEC-SSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTS---CEEEEESSSCEEEECCT
T ss_pred EEEC-CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCC---EEEEEeccCCceeeeec
Confidence 3564 57888999999999999999999999988865 89999999 777776654321 2444444
Q ss_pred -------------------------------------------cCCcEEeEeeeccccCCcceeeeeecceeEEe--ecC
Q 015220 265 -------------------------------------------EDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QEN 299 (411)
Q Consensus 265 -------------------------------------------~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~ 299 (411)
.+++...+ +.+|..+|..+..++++.+|. ..+
T Consensus 158 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~---~~~h~~~v~~~~~s~~g~~l~sgs~d 234 (343)
T 2xzm_R 158 KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYT---FKAHESNVNHLSISPNGKYIATGGKD 234 (343)
T ss_dssp TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEE---EECCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEE---EcCccccceEEEECCCCCEEEEEcCC
Confidence 23333333 457889999999998875544 578
Q ss_pred ceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEecCeEEEEecC-Cceee--eec-----------ccccc
Q 015220 300 ENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFRNRTVAVWNFR-GELVT--SFE-----------DHLLW 362 (411)
Q Consensus 300 ~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfsd~tI~iWn~~-Gel~~--s~e-----------~H~~~ 362 (411)
..|+|||+.+..... ..+.+...+..++.+ +++.+..|++|++||+. ++... +++ +|..
T Consensus 235 g~v~iwd~~~~~~~~---~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 310 (343)
T 2xzm_R 235 KKLLIWDILNLTYPQ---REFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNP- 310 (343)
T ss_dssp CEEEEEESSCCSSCS---EEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCC-
T ss_pred CeEEEEECCCCcccc---eeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCC-
Confidence 899999995433211 222244456666655 55666699999999998 65443 665 4544
Q ss_pred CCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 363 HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 363 ~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.++.++.+|||+.|++|+.|. +|++||+.||+
T Consensus 311 ----~v~~~~~sp~g~~l~sg~~Dg----------~v~~w~~~~g~ 342 (343)
T 2xzm_R 311 ----QCTSLAWNALGKKLFAGFTDG----------VIRTFSFETSA 342 (343)
T ss_dssp ----CEEEEEECSSSCCEEEEETTS----------EEEEEEEEEEE
T ss_pred ----ceEEEEECCCCCeEEEecCCc----------eEEEEEEEccC
Confidence 678999999999999999997 99999999986
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.77 E-value=1.9e-16 Score=144.05 Aligned_cols=192 Identities=8% Similarity=0.001 Sum_probs=154.5
Q ss_pred EEeeCC---CC---eEEEeecCCCeEEEEEeeCceE-----EEEecc-------CceeEEEEe-----CCEE-EEEEecC
Q 015220 198 VEFDDV---NG---KVLTYSAQDSIYKVFDLKNYTM-----LYSISD-------KNVQEIKIS-----PGIM-LLIFTKA 253 (411)
Q Consensus 198 vEFDd~---NG---kiLt~~~~ds~ykVWdL~~Ys~-----iysLs~-------~~VqeIkIS-----dG~~-Lai~q~t 253 (411)
+.|... +| +.|++.+.|++++|||+.+.+. +..+.. ..|..+.++ +|.+ |++....
T Consensus 68 ~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d 147 (397)
T 1sq9_A 68 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 147 (397)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT
T ss_pred EEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC
Confidence 456543 58 9999999999999999999887 777763 579999998 5666 6665443
Q ss_pred CCceeeEEEEecC------CcEEe-----Eeee----ccccCCcceeeeeecce-eEEeecCceeeEEEcccceEEEeec
Q 015220 254 SGHVPLKILSIED------GTVLK-----SFNH----LLHRNKKVDFIEQFNEK-LLVKQENENLQILDVRNFELTEVSR 317 (411)
Q Consensus 254 ~~~ipiKIl~I~t------G~~L~-----t~~~----LL~h~K~I~FLE~~~ek-llIKQe~~~LkI~dL~t~e~~~v~~ 317 (411)
-.|+||++.+ ++.+. ++.- .-.|..+|..++.++++ ++....+..|++||+.+++...
T Consensus 148 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--- 221 (397)
T 1sq9_A 148 ---GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLY--- 221 (397)
T ss_dssp ---SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEE---
T ss_pred ---CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeE---
Confidence 4689999999 88777 5320 13478999999999885 3445578899999999998887
Q ss_pred cccC---C---CceEEEEeec---eeEEEE-ec---CeEEEEecC-Cceeeeecc-------------ccccCCCCccce
Q 015220 318 TEFM---T---PSAFIFLYEN---QLFLTF-RN---RTVAVWNFR-GELVTSFED-------------HLLWHPDCNTNN 370 (411)
Q Consensus 318 T~f~---h---psAfifLy~s---qlFlSf-sd---~tI~iWn~~-Gel~~s~e~-------------H~~~~~~c~~n~ 370 (411)
+.-. | ...+..+..+ +++++. .| ++|++||++ |+++.++.+ |.. .+..
T Consensus 222 ~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~ 296 (397)
T 1sq9_A 222 NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS-----WVMS 296 (397)
T ss_dssp EEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS-----CEEE
T ss_pred EEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC-----cEEE
Confidence 4444 7 7788888765 667777 77 899999998 999999999 877 8999
Q ss_pred EEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 371 IYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 371 i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+..+||+++|++++.|. +|.|||+.+|+++
T Consensus 297 ~~~~~~~~~l~~~~~dg----------~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 297 LSFNDSGETLCSAGWDG----------KLRFWDVKTKERI 326 (397)
T ss_dssp EEECSSSSEEEEEETTS----------EEEEEETTTTEEE
T ss_pred EEECCCCCEEEEEeCCC----------eEEEEEcCCCcee
Confidence 99999999999999886 9999999999875
No 78
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.77 E-value=3.4e-16 Score=141.45 Aligned_cols=238 Identities=12% Similarity=0.079 Sum_probs=168.2
Q ss_pred CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCe---EEeeC-CCCeEEE
Q 015220 134 TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGF---VEFDD-VNGKVLT 209 (411)
Q Consensus 134 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgf---vEFDd-~NGkiLt 209 (411)
.+...|+++-++....-|++.| .|. .++.-.+. .+ .+.++- .--.|.+- +.|.. .+|..|+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s---~D~--~v~iw~~~-----~~---~~~~~~--~l~gH~~~V~~v~~s~~~~g~~l~ 71 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCS---SDK--TIKIFEVE-----GE---THKLID--TLTGHEGPVWRVDWAHPKFGTILA 71 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE---TTS--CEEEEEBC-----SS---CBCCCE--EECCCSSCEEEEEECCGGGCSEEE
T ss_pred CCcCceEEEEECCCCCEEEEEe---CCC--EEEEEecC-----CC---CcEEEE--EEccccCCeEEEEecCCCcCCEEE
Confidence 4566788888888777666543 222 23332221 00 001111 11134444 46754 3689999
Q ss_pred eecCCCeEEEEEeeCc--eEEEEeccC--ceeEEEEeC---CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCc
Q 015220 210 YSAQDSIYKVFDLKNY--TMLYSISDK--NVQEIKISP---GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (411)
Q Consensus 210 ~~~~ds~ykVWdL~~Y--s~iysLs~~--~VqeIkISd---G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~ 282 (411)
+++.|++++|||+++. +.+..+..+ .|..+..+| |.+|++.... -.|+||++.++..... ..+-+|..+
T Consensus 72 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d---~~v~~wd~~~~~~~~~-~~~~~h~~~ 147 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD---GKVSVVEFKENGTTSP-IIIDAHAIG 147 (297)
T ss_dssp EEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEEBCSSSCBCC-EEEECCSSC
T ss_pred EEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC---CcEEEEEecCCCceee-eeeecccCc
Confidence 9999999999999986 466667643 799999995 7788876554 3589999998853321 125688999
Q ss_pred ceeeeeecc---------------eeEEeecCceeeEEEcccce-EEEeeccccCCCceEEEEeec------eeEEEE-e
Q 015220 283 VDFIEQFNE---------------KLLVKQENENLQILDVRNFE-LTEVSRTEFMTPSAFIFLYEN------QLFLTF-R 339 (411)
Q Consensus 283 I~FLE~~~e---------------kllIKQe~~~LkI~dL~t~e-~~~v~~T~f~hpsAfifLy~s------qlFlSf-s 339 (411)
|..+..+++ .+.....+..++|||+.+++ ......++-+|..++..++.+ ++++|. .
T Consensus 148 v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 999988875 45666789999999999876 222334777899999999875 578888 7
Q ss_pred cCeEEEEecCC-c---eeeee--ccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 340 NRTVAVWNFRG-E---LVTSF--EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 340 d~tI~iWn~~G-e---l~~s~--e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
|++|+|||++. . ....+ .+|.. .+..+..+|||++|+|++.|. +|+||+..
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~las~~~D~----------~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPD-----VLWRASWSLSGNVLALSGGDN----------KVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSS-----CEEEEEECSSSCCEEEEETTS----------CEEEEEEC
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCC-----cEEEEEECCCCCEEEEEcCCC----------cEEEEEEC
Confidence 89999999983 2 12233 45544 688999999999999999997 99999986
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.77 E-value=1.8e-17 Score=151.85 Aligned_cols=184 Identities=11% Similarity=0.131 Sum_probs=143.1
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe--------CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS--------PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS--------dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
.++..|+.++.|++++|||+++.+.+.++....|..+..+ ||.+.+.. .. -.+.+|++++++++..+.
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~-~~---~~~~~~~~~~~~~~~~~~ 121 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLY-PG---NQITILDSKTNKVLREIE 121 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEE-TT---TEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEE-cc---CceEEeecCCcceeEEee
Confidence 3578899999999999999999999988875566554444 33332222 11 145567888999887743
Q ss_pred eccccCCcceeeeeec--cee--EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEE
Q 015220 275 HLLHRNKKVDFIEQFN--EKL--LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVW 346 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~--ekl--lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iW 346 (411)
++|..+|..+..++ ++. +....+..|++||+.+++...+. ...|...+.+++.+ ++++++ .|++|++|
T Consensus 122 --~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~--~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 122 --VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH--SAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp --CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE--CCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred --cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE--ecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 57888999999988 554 33668899999999999997642 22345556666665 788887 89999999
Q ss_pred ecC-Ccee-eeecc-ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 347 NFR-GELV-TSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 347 n~~-Gel~-~s~e~-H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|++ |+.+ .+|+. |.. .++.+..+|||.+|+|++ |+ +|+|||+.+++++
T Consensus 198 d~~~~~~~~~~~~~~h~~-----~v~~l~fs~~g~~l~s~~-~~----------~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEA-----KIKEVKFADNGYWMVVEC-DQ----------TVVCFDLRKDVGT 248 (343)
T ss_dssp ESSCTTSCCEECCCCTTS-----CEEEEEECTTSSEEEEEE-SS----------BEEEEETTSSTTC
T ss_pred ECCCCCCCccEEeccCCC-----CEEEEEEeCCCCEEEEEe-CC----------eEEEEEcCCCCcc
Confidence 999 8887 89998 988 899999999999999999 55 8999999998763
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.77 E-value=3.1e-16 Score=138.94 Aligned_cols=196 Identities=11% Similarity=0.043 Sum_probs=152.4
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEE--e-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKI--S-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkI--S-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
-+.|.. +|+.|+..+.|++++|||+.+.+.+....+. .|..+.. + +|.+|++..... .|+||++.+++.+.+
T Consensus 91 ~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg---~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 91 DVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDK---TLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTS---EEEEECSSCSSCSEE
T ss_pred EEEECc-CCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCC---cEEEEECCCCcEEEE
Confidence 356765 8889999999999999999999988766554 8999998 6 788777765543 499999999999988
Q ss_pred eeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eeccccCCCceEEEEeec-----eeEEEE-ecCeEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEFMTPSAFIFLYEN-----QLFLTF-RNRTVAV 345 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~s-----qlFlSf-sd~tI~i 345 (411)
+. . ...+..+...+..+++...+..+++||+.+..... .......++...+.+... ..++++ .|++|++
T Consensus 167 ~~---~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 167 LQ---L-PERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp EE---C-SSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred Ee---c-CCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 44 2 34777888999999999999999999999865433 222333444555544433 226666 8999999
Q ss_pred EecC-C---ceeeeeccccccCC-------CCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 346 WNFR-G---ELVTSFEDHLLWHP-------DCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 346 Wn~~-G---el~~s~e~H~~~~~-------~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|+++ + .++.++.+|..-.. .-.++.+.++|||++|++++.|. +|.|||+.+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg----------~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG----------RFSFWDKDARTKL 308 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS----------CEEEEETTTTEEE
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC----------eEEEEECCCCcEE
Confidence 9999 4 57788998876110 01488999999999999999986 9999999999885
No 81
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.77 E-value=2.3e-15 Score=139.10 Aligned_cols=268 Identities=10% Similarity=0.056 Sum_probs=186.1
Q ss_pred ceehhhhccccceeeecccccEEEE--EeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICF--LNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG 183 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~--lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 183 (411)
.+++.-...|....||..+++.+|. +...+..-|+++=++...+.|++.| .|. .++.-... .++.
T Consensus 29 ~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s---~D~--~v~iw~~~-----~~~~--- 95 (345)
T 3fm0_A 29 TLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS---FDA--TTCIWKKN-----QDDF--- 95 (345)
T ss_dssp SCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE---TTS--CEEEEEEC-----CC-E---
T ss_pred CEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE---CCC--cEEEEEcc-----CCCe---
Confidence 4555556778999999998987773 4567888899999999777776644 222 22222111 1000
Q ss_pred CcceeecccCCCCe---EEeeCCCCeEEEeecCCCeEEEEEeeCc---eEEEEeccC--ceeEEEEe-CCEEEEEEecCC
Q 015220 184 FALFESESLKWPGF---VEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSISDK--NVQEIKIS-PGIMLLIFTKAS 254 (411)
Q Consensus 184 ~~LF~~~~l~~Pgf---vEFDd~NGkiLt~~~~ds~ykVWdL~~Y---s~iysLs~~--~VqeIkIS-dG~~Lai~q~t~ 254 (411)
..+. .--.|.+. +.|. ++|+.|++++.|++++|||+.+. +++..+..+ .|..+..+ +|.+|++.....
T Consensus 96 ~~~~--~~~~h~~~v~~v~~s-p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 96 ECVT--TLEGHENEVKSVAWA-PSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp EEEE--EECCCSSCEEEEEEC-TTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred EEEE--EccCCCCCceEEEEe-CCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 0000 00123332 4564 48999999999999999999875 456667654 79999999 788888776544
Q ss_pred CceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccce-------------EEEeeccc
Q 015220 255 GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFE-------------LTEVSRTE 319 (411)
Q Consensus 255 ~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e-------------~~~v~~T~ 319 (411)
-++||++.+++...... +-+|..+|..++.++++.++. +.+..|+|||+.... ..++. +.
T Consensus 173 ---~i~~w~~~~~~~~~~~~-~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~-~~ 247 (345)
T 3fm0_A 173 ---TVKLYREEEDDWVCCAT-LEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCIC-TL 247 (345)
T ss_dssp ---CEEEEEEETTEEEEEEE-ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEE-EE
T ss_pred ---cEEEEEecCCCEEEEEE-ecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeE-Ee
Confidence 48999999997543222 668999999999998875444 578899999985421 11111 22
Q ss_pred c-CCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cc----e-----eeeeccccccCCCCccceEEEcCCC-CEEEEE
Q 015220 320 F-MTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GE----L-----VTSFEDHLLWHPDCNTNNIYITSDQ-DLIISY 383 (411)
Q Consensus 320 f-~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Ge----l-----~~s~e~H~~~~~~c~~n~i~Is~Dq-d~iiS~ 383 (411)
- .|...+..++.+ +.+++. .|++|++|+.+ +. + ...+.+|.. .++.|..+||+ .+|+||
T Consensus 248 ~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~~p~~~~~laS~ 322 (345)
T 3fm0_A 248 SGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQ-----DVNCVAWNPKEPGLLASC 322 (345)
T ss_dssp CSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSS-----CEEEEEECSSSTTEEEEE
T ss_pred cCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccC-----cEeEeEEeCCCceEEEEc
Confidence 2 377888888866 567777 89999999987 32 1 123457777 89999999998 599999
Q ss_pred ecCCCCCccccCCceEEEeeecceee
Q 015220 384 CKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 384 ~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+.|. +|++|++.++|-
T Consensus 323 s~Dg----------~v~~W~~~~~~~ 338 (345)
T 3fm0_A 323 SDDG----------EVAFWKYQRPEG 338 (345)
T ss_dssp ETTS----------CEEEEEECC---
T ss_pred CCCC----------cEEEEEecCCCC
Confidence 9997 999999999874
No 82
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.77 E-value=2.4e-17 Score=153.79 Aligned_cols=186 Identities=8% Similarity=0.064 Sum_probs=144.6
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
-+.|. ++|+.|+.+..+ .++|||+.+.+.++......+..+.++ ++..+++...... -|+|||+.+|+++.++.
T Consensus 24 ~v~fs-~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~v~iWd~~~~~~~~~~~- 98 (355)
T 3vu4_A 24 DYEFN-QDQSCLILSTLK-SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKE--VVHIWDDVKKQDVSRIK- 98 (355)
T ss_dssp EEEEC-TTSSEEEEECSS-EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTT--EEEEEETTTTEEEEEEE-
T ss_pred EEEEC-CCCCEEEEEcCC-EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCcc--EEEEEECCCCcEEEEEE-
Confidence 46675 588888876655 589999999999988876677777777 4444444333322 89999999999999844
Q ss_pred ccccCCcceeeeeecceeEEeecCceeeEEEcccc-eEEEeeccccCCCceEEEEeeceeEEE-E-ecCeEEEEecC-Cc
Q 015220 276 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF-ELTEVSRTEFMTPSAFIFLYENQLFLT-F-RNRTVAVWNFR-GE 351 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~-e~~~v~~T~f~hpsAfifLy~sqlFlS-f-sd~tI~iWn~~-Ge 351 (411)
+..+|..+...++.+++.. +..++|||+.++ +... +.- .|....++..+.+.++ + .+++|++||++ |.
T Consensus 99 ---~~~~v~~v~~~~~~~~~~~-~~~i~i~d~~~~~~~~~---~~~-~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~ 170 (355)
T 3vu4_A 99 ---VDAPVKDLFLSREFIVVSY-GDVISVFKFGNPWKRIT---DDI-RFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSG 170 (355)
T ss_dssp ---CSSCEEEEEECSSEEEEEE-TTEEEEEESSTTCCBSS---CCE-EEEEEEEEETTEEEEEESSCTTCEEEEECCC--
T ss_pred ---CCCceEEEEEcCCEEEEEE-cCEEEEEECCCCceeeE---Eec-cCCceEEEEccEEEEeCCCcCcEEEEEECCCCC
Confidence 4579999999999888876 568999999998 5443 222 2666666666444444 4 89999999999 54
Q ss_pred ---------------e-eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCce-EEEeeecceeee
Q 015220 352 ---------------L-VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGK-LFVSLLMFVTCK 410 (411)
Q Consensus 352 ---------------l-~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gt-I~i~~i~tGk~~ 410 (411)
+ +.++.+|.. .++.+.++|||.+|+|||.|. + |+|||+.+|+++
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~h~~-----~v~~~~~s~~g~~l~s~s~d~----------~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 171 SATTQDQGVQQKAILGKGVLIKAHTN-----PIKMVRLNRKSDMVATCSQDG----------TIIRVFKTEDGVLV 231 (355)
T ss_dssp ----------------CCEEECCCSS-----CEEEEEECTTSSEEEEEETTC----------SEEEEEETTTCCEE
T ss_pred ccccccccccccccCcccEEEEccCC-----ceEEEEECCCCCEEEEEeCCC----------CEEEEEECCCCcEE
Confidence 2 789999998 899999999999999999997 9 999999999985
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.77 E-value=9.8e-17 Score=150.05 Aligned_cols=186 Identities=13% Similarity=0.061 Sum_probs=155.0
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc---CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~---~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~ 273 (411)
+.|++ +. +++.+.|++++|||+.+.+.+..+.. ..|..+.++ +|.+|++..... .|+||++++|+.+.+
T Consensus 99 ~~~s~--~~-l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg---~i~iwd~~~~~~~~~- 171 (401)
T 4aez_A 99 LDWSN--LN-VVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG---LVDIYDVESQTKLRT- 171 (401)
T ss_dssp EEECT--TS-EEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCEEEE-
T ss_pred EeecC--CC-EEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC---eEEEEECcCCeEEEE-
Confidence 55554 33 45567899999999999998766653 389999999 888888876543 689999999999998
Q ss_pred eeccccCCcceeeeeecceeEEeecCceeeEEEccc-ceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEec
Q 015220 274 NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNF 348 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t-~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~ 348 (411)
+-+|..+|..+...+..++....+..|++||+.+ ++... +...|+..+..+..+ +.|+++ .|++|++||+
T Consensus 172 --~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 246 (401)
T 4aez_A 172 --MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIG---TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDA 246 (401)
T ss_dssp --ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE---EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred --ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceee---EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccC
Confidence 5589999999999888889999999999999994 55554 667799999988876 677777 7899999999
Q ss_pred C-CceeeeeccccccCCCCccceEEEcCCC-CEEEEEe--cCCCCCccccCCceEEEeeecceeee
Q 015220 349 R-GELVTSFEDHLLWHPDCNTNNIYITSDQ-DLIISYC--KADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 349 ~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq-d~iiS~~--~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+ ++++.++.+|.. .+..+..+||| .++++|+ .|. +|.+||+.+|+++
T Consensus 247 ~~~~~~~~~~~~~~-----~v~~~~~~p~~~~ll~~~~gs~d~----------~i~i~d~~~~~~~ 297 (401)
T 4aez_A 247 RSSIPKFTKTNHNA-----AVKAVAWCPWQSNLLATGGGTMDK----------QIHFWNAATGARV 297 (401)
T ss_dssp TCSSEEEEECCCSS-----CCCEEEECTTSTTEEEEECCTTTC----------EEEEEETTTCCEE
T ss_pred CCCCccEEecCCcc-----eEEEEEECCCCCCEEEEecCCCCC----------EEEEEECCCCCEE
Confidence 9 899999999988 89999999987 5666654 454 9999999999875
No 84
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.76 E-value=2.8e-16 Score=158.35 Aligned_cols=243 Identities=10% Similarity=0.110 Sum_probs=180.5
Q ss_pred CCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeE---EeeCCCCeEEE
Q 015220 133 VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFV---EFDDVNGKVLT 209 (411)
Q Consensus 133 ~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgfv---EFDd~NGkiLt 209 (411)
..+...|.+|-++..+..++. +...|. .++.-.+ ..++...+ .-....-.|.+.| .|. ++|+.|+
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~--s~s~D~--~i~~W~~-----~~~~~~~~--~~~~~~~~h~~~v~~v~~s-~~g~~l~ 446 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIV--SASRDK--SIILWKL-----TKDDKAYG--VAQRRLTGHSHFVEDVVLS-SDGQFAL 446 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEE--EEETTS--EEEEEEC-----CCSTTCSC--EEEEEEECCSSCEEEEEEC-TTSSEEE
T ss_pred ccCCceeEEEEecCCCCCEEE--EEeCCC--cEEEEEc-----cCCCcccc--cccceecCCCCcEEEEEEC-CCCCEEE
Confidence 367788899999877655544 222332 3333322 11111011 1111222455554 453 5899999
Q ss_pred eecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceee
Q 015220 210 YSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFI 286 (411)
Q Consensus 210 ~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FL 286 (411)
+++.|++++|||+.+.+.+.++.++ .|..+.+| +|..|+....- -.|+||++.++..........+|...|..+
T Consensus 447 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~ 523 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGECKYTISEGGEGHRDWVSCV 523 (694)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSTTSCSSCEEEE
T ss_pred EEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCcceeeccCCCCCCCcEEEE
Confidence 9999999999999999999998866 89999999 78777776543 358999987665444333345788999999
Q ss_pred eeecce----eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeeec
Q 015220 287 EQFNEK----LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFE 357 (411)
Q Consensus 287 E~~~ek----llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e 357 (411)
..+++. ++-.+.+..|+|||+.+++... ++.+|...+..+..+ ++++|+ .|++|++||++ |..+.+++
T Consensus 524 ~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~---~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 524 RFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS---TLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp EECSCSSSCEEEEEETTSCEEEEETTTCCEEE---EECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EEeCCCCcceEEEEeCCCeEEEEECCCCcEEE---EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 998875 5666789999999999999887 788899999999887 778888 78999999998 99988887
Q ss_pred cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 358 DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 358 ~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.|. .++.+..+||+.++++++ +. .|+|||+.+|+++
T Consensus 601 ~~~------~v~~~~~sp~~~~l~~~~-~~----------~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 601 ANS------VIHALCFSPNRYWLCAAT-EH----------GIKIWDLESKSIV 636 (694)
T ss_dssp CSS------CEEEEEECSSSSEEEEEE-TT----------EEEEEETTTTEEE
T ss_pred CCC------cEEEEEEcCCCcEEEEEc-CC----------CEEEEECCCCCCh
Confidence 653 588999999999988765 33 7999999999874
No 85
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.76 E-value=1.8e-16 Score=144.89 Aligned_cols=242 Identities=10% Similarity=0.062 Sum_probs=167.3
Q ss_pred EeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCe---EEeeCC-CCe
Q 015220 131 LNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGF---VEFDDV-NGK 206 (411)
Q Consensus 131 lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pgf---vEFDd~-NGk 206 (411)
+-..+...|.++=++....-|++.| .|. .++.--+ ..|+ ..+. ..--.|.+- +.|..+ +|.
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs---~D~--~v~lwd~-----~~~~----~~~~-~~l~gH~~~V~~v~~~~~~~~~ 72 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCS---SDR--SVKIFDV-----RNGG----QILI-ADLRGHEGPVWQVAWAHPMYGN 72 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEE---TTT--EEEEEEE-----ETTE----EEEE-EEEECCSSCEEEEEECCGGGSS
T ss_pred ecccccCeEEEeeEcCCCCEEEEEe---CCC--eEEEEEe-----cCCC----cEEE-EEEcCCCccEEEEEeCCCCCCC
Confidence 3345677788888888766665543 232 2333222 1111 0000 111135554 457543 689
Q ss_pred EEEeecCCCeEEEEEeeCc--eEEEEeccC--ceeEEEEeC---CEEEEEEecCCCceeeEEEEecCCcEEeEeeecccc
Q 015220 207 VLTYSAQDSIYKVFDLKNY--TMLYSISDK--NVQEIKISP---GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR 279 (411)
Q Consensus 207 iLt~~~~ds~ykVWdL~~Y--s~iysLs~~--~VqeIkISd---G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h 279 (411)
.|++++.|++++|||+++. +.++++..+ .|..+..+| |.+|+...... .|+||++.++........+-+|
T Consensus 73 ~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~---~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 73 ILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG---AISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp CEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS---CEEEEEECSSSCEEECCBTTSS
T ss_pred EEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC---CEEEEecCCCCCcceeeeeccc
Confidence 9999999999999999986 577777755 799999994 77787766543 4899999988543322336688
Q ss_pred CCcceeeeeecc-------------------eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-------e
Q 015220 280 NKKVDFIEQFNE-------------------KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-------Q 333 (411)
Q Consensus 280 ~K~I~FLE~~~e-------------------kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-------q 333 (411)
..+|..+...++ .+.....+..|+|||+.+++..+...++.+|..++..++.+ +
T Consensus 150 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~ 229 (316)
T 3bg1_A 150 TIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS 229 (316)
T ss_dssp SSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC
T ss_pred cCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc
Confidence 888988887765 23445578899999998764333234788999999999875 4
Q ss_pred eEEEE-ecCeEEEEecCC-c----eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 334 LFLTF-RNRTVAVWNFRG-E----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 334 lFlSf-sd~tI~iWn~~G-e----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
+++|. .|++|++|+++. . ....+.+|.. .+..+..+|||++|+|++.|. +|+||+..
T Consensus 230 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-----~v~~v~~sp~g~~las~~~D~----------~v~lw~~~ 292 (316)
T 3bg1_A 230 TIASCSQDGRVFIWTCDDASSNTWSPKLLHKFND-----VVWHVSWSITANILAVSGGDN----------KVTLWKES 292 (316)
T ss_dssp EEEEEETTCEEEEEECSSTTCCCCBCCEEEECSS-----CEEEEEECTTTCCEEEEESSS----------CEEEEEEC
T ss_pred eEEEEcCCCeEEEEEccCccccchhhhhhhcCCC-----cEEEEEEcCCCCEEEEEcCCC----------eEEEEEEC
Confidence 68888 799999999873 1 2345666755 789999999999999999997 99999985
No 86
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.76 E-value=1.4e-16 Score=151.41 Aligned_cols=207 Identities=14% Similarity=0.054 Sum_probs=156.2
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC----ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEe
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK----NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~----~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~ 271 (411)
-+.|...||..|++++.|++++|||+++..+......+ .+..+.++ +|.+|++..... .|+||++. |+.+.
T Consensus 169 ~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg---~i~~wd~~-~~~~~ 244 (435)
T 4e54_B 169 GLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG---NVILLNMD-GKELW 244 (435)
T ss_dssp EEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS---BEEEEESS-SCBCC
T ss_pred EEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC---cEeeeccC-cceeE
Confidence 36788889999999999999999999886654333333 46778888 888888875443 58999985 56666
Q ss_pred EeeeccccCCcceeeeeecce--eE-EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEE
Q 015220 272 SFNHLLHRNKKVDFIEQFNEK--LL-VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVA 344 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ek--ll-IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~ 344 (411)
+ +-+|..+|..+..++++ ++ ..+.+..|+|||+++++.........+|...+.+++.+ +.++|+ .|++|+
T Consensus 245 ~---~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~ 321 (435)
T 4e54_B 245 N---LRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR 321 (435)
T ss_dssp C---SBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred E---EecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence 6 67899999999998754 33 45678999999999987654333556799999999876 677777 899999
Q ss_pred EEecC-CceeeeeccccccCCC-CccceEEEcCCCCEEEEEecCCCCCc-cccCC-ceEEEeeecceeee
Q 015220 345 VWNFR-GELVTSFEDHLLWHPD-CNTNNIYITSDQDLIISYCKADSDDP-LAEGN-GKLFVSLLMFVTCK 410 (411)
Q Consensus 345 iWn~~-Gel~~s~e~H~~~~~~-c~~n~i~Is~Dqd~iiS~~~d~~~~~-~~~~~-gtI~i~~i~tGk~~ 410 (411)
|||++ |+...++..|...+.. ...-....+++++++++++.++.... +.... ++|++||+.||+++
T Consensus 322 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 322 VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp EEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred EEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 99999 9999999888754322 22334567889998888876654322 22222 68999999999975
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.75 E-value=3e-16 Score=139.46 Aligned_cols=247 Identities=12% Similarity=-0.003 Sum_probs=173.1
Q ss_pred CCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCe-EEEee
Q 015220 133 VTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGK-VLTYS 211 (411)
Q Consensus 133 ~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGk-iLt~~ 211 (411)
..+.+.|.++-++...+-|++.| .| ..++.-.+. .++... .+......-...--+.|.. +|+ .|++.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~---~d--~~v~iw~~~-----~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~~l~~~ 75 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITS---WD--GSLTVYKFD-----IQAKNV-DLLQSLRYKHPLLCCNFID-NTDLQIYVG 75 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEE---TT--SEEEEEEEE-----TTTTEE-EEEEEEECSSCEEEEEEEE-SSSEEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEc---CC--CeEEEEEeC-----CCCccc-cceeeeecCCceEEEEECC-CCCcEEEEE
Confidence 36677888888888666665533 22 233333332 111000 0010011111122456664 588 88889
Q ss_pred cCCCeEEEEEe-eCceEEEEecc--C--ceeEEEEeCCEEEEEEecCCCceeeEEEEecC---------CcEEeEeeecc
Q 015220 212 AQDSIYKVFDL-KNYTMLYSISD--K--NVQEIKISPGIMLLIFTKASGHVPLKILSIED---------GTVLKSFNHLL 277 (411)
Q Consensus 212 ~~ds~ykVWdL-~~Ys~iysLs~--~--~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~t---------G~~L~t~~~LL 277 (411)
..|+.++|||+ .+.+. ..+.. + .|..+.++++.+|++.... -.|++|++.+ ++++.+ +
T Consensus 76 ~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~----~ 147 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYGDDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNN----T 147 (342)
T ss_dssp ETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEETTTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSS----S
T ss_pred cCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCCCCEEEEEcCC---CeEEEEcccccccccccccCCeeeE----E
Confidence 99999999999 77765 55654 3 8999999976666666543 3589999999 888877 3
Q ss_pred ccCCcceeeeeecceeEEeecCceeeEEEccc-ceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-C
Q 015220 278 HRNKKVDFIEQFNEKLLVKQENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR-G 350 (411)
Q Consensus 278 ~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t-~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~-G 350 (411)
.|..+|..++..++.+++...+..|++||+.+ ++... ......|+..+..+..+ +.++++ .|++|++|+++ +
T Consensus 148 ~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred eeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 47789999999999999999999999999998 54211 11333456666665543 567777 88999999998 5
Q ss_pred ------ceeeeeccccccC----CCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 351 ------ELVTSFEDHLLWH----PDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 351 ------el~~s~e~H~~~~----~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.++.+|..|.... ....++.+..+|||++|++++.|. +|.+||+.+|+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 227 GDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG----------IISCWNLQTRKKI 286 (342)
T ss_dssp CCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTS----------CEEEEETTTTEEE
T ss_pred CcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCc----------eEEEEcCccHhHh
Confidence 7888999885411 123688999999999999999886 9999999999975
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.75 E-value=1e-15 Score=141.50 Aligned_cols=197 Identities=10% Similarity=0.113 Sum_probs=148.2
Q ss_pred eEEeeCCCC-eEEEeecCCCeEEEEEeeCceEE---------------------------------------EEe-cc--
Q 015220 197 FVEFDDVNG-KVLTYSAQDSIYKVFDLKNYTML---------------------------------------YSI-SD-- 233 (411)
Q Consensus 197 fvEFDd~NG-kiLt~~~~ds~ykVWdL~~Ys~i---------------------------------------ysL-s~-- 233 (411)
-+.|..... ..|+.++.|++++|||+.+.+.. ..+ .+
T Consensus 98 ~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 177 (447)
T 3dw8_B 98 KIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHT 177 (447)
T ss_dssp EEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCS
T ss_pred EEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCC
Confidence 467765532 56777789999999999885542 122 22
Q ss_pred CceeEEEEe-CCEEEEEEecCCCceeeEEEEec-CCcEEeEee----eccccCCcceeeeeecce---eEEeecCceeeE
Q 015220 234 KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE-DGTVLKSFN----HLLHRNKKVDFIEQFNEK---LLVKQENENLQI 304 (411)
Q Consensus 234 ~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~-tG~~L~t~~----~LL~h~K~I~FLE~~~ek---llIKQe~~~LkI 304 (411)
..|..+.++ +|.+|+.. . ---|+||++. +++.+..+. .+-+|..+|..++.++++ ++....+..|+|
T Consensus 178 ~~v~~~~~~~~~~~l~s~--~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA--D--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp SCCCEEEECTTSSEEEEE--C--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred cceEEEEEcCCCCEEEEe--C--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 279999999 88888875 2 4578999999 455555321 255899999999999975 566678899999
Q ss_pred EEcccceE----EEeeccccCCCc------------eEEEEeec---eeEEEEecCeEEEEecC--CceeeeeccccccC
Q 015220 305 LDVRNFEL----TEVSRTEFMTPS------------AFIFLYEN---QLFLTFRNRTVAVWNFR--GELVTSFEDHLLWH 363 (411)
Q Consensus 305 ~dL~t~e~----~~v~~T~f~hps------------AfifLy~s---qlFlSfsd~tI~iWn~~--Gel~~s~e~H~~~~ 363 (411)
||+++++. .. +.-.|.. .+..+..+ +++++.++++|++||++ |.++.++.+|....
T Consensus 254 wd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 254 CDMRASALCDRHSK---LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EETTTCSSSCTTCE---EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EECcCCccccceee---EeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeecccccc
Confidence 99999886 33 3334443 77777776 67888877999999997 88999999997532
Q ss_pred C--------CCc--cceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 364 P--------DCN--TNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 364 ~--------~c~--~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
. +|. ...+..+|||+.|++|+.|. +|.|||+.+|+++
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg----------~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN----------FFRMFDRNTKRDI 377 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT----------EEEEEETTTCCEE
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCC----------EEEEEEcCCCcce
Confidence 2 221 22489999999999999987 9999999999874
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.75 E-value=9.6e-17 Score=169.74 Aligned_cols=270 Identities=10% Similarity=0.116 Sum_probs=205.2
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCC----
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKP---- 180 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~---- 180 (411)
..++++-...|....||..+++.+..+. .+..-|.++-++.....+++.| .|. .++ .-+.+.......
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~h~~~v~~v~~spdg~~l~s~s---~dg--~v~--vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSRLKVADCR-GHLSWVHGVMFSPDGSSFLTAS---DDQ--TIR--VWETKKVCKNSAIVLK 923 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEE---TTS--CEE--EEEHHHHHSCCSSSEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCceeeecC-CCccceEEEEECCCCCEEEEEe---CCC--eEE--EEEccccceeeeeccc
Confidence 4567777788899999999999888776 4556788999998887777654 222 222 222221110000
Q ss_pred ----------------------------CCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec
Q 015220 181 ----------------------------DAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS 232 (411)
Q Consensus 181 ----------------------------~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs 232 (411)
..+...+.. -...--+.| .++|+.++....++.+++||+.+.+.+.++.
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~-sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLP--EAQVSCCCL-SPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEEC--CSCEEEEEE-CTTSSEEEEEETTSCCEEEETTTTSCEEECC
T ss_pred ceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcc--cCcEEEEEE-cCCCCEEEEEcCCCCEEEEEcCCCceeeecc
Confidence 000000000 001112334 3578889999999999999999999999988
Q ss_pred cC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee-EEeecCceeeEEEcc
Q 015220 233 DK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVR 308 (411)
Q Consensus 233 ~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~ 308 (411)
.+ .|..+.+| ||.+|++..... -|++|++.+|+.+. +.+|..+|..+..+++.. +....+..+++||+.
T Consensus 1001 ~h~~~v~~l~~s~dg~~l~s~~~dg---~i~vwd~~~~~~~~----~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTADGKTLISSSEDS---VIQVWNWQTGDYVF----LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp CCSSCCCCEEECSSSSCEEEECSSS---BEEEEETTTTEEEC----CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred cCCCceEEEEECCCCCEEEEEcCCC---EEEEEECCCCceEE----EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC
Confidence 65 89999999 888888765433 58999999999874 468899999999988776 566788999999999
Q ss_pred cceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 309 NFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 309 t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
+++... +.-+|...+..++.+ +.++++ .|++|++||+. |+++.++.+|.. .++.+..||||++|++|
T Consensus 1074 ~~~~~~---~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~-----~v~~~~~s~dg~~lat~ 1145 (1249)
T 3sfz_A 1074 TGRIER---DFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNG-----CVRCSAFSLDGILLATG 1145 (1249)
T ss_dssp TTCCCE---EEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSS-----CEEEEEECSSSSEEEEE
T ss_pred CCceeE---EEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCC-----cEEEEEECCCCCEEEEE
Confidence 999877 666788888777766 667777 89999999999 999999999988 89999999999999999
Q ss_pred ecCCCCCccccCCceEEEeeecceeee
Q 015220 384 CKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 384 ~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.|. +|.+||+.+|+++
T Consensus 1146 ~~dg----------~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1146 DDNG----------EIRIWNVSDGQLL 1162 (1249)
T ss_dssp ETTS----------CCCEEESSSSCCC
T ss_pred eCCC----------EEEEEECCCCceE
Confidence 9886 9999999999874
No 90
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.75 E-value=5.7e-17 Score=150.84 Aligned_cols=224 Identities=13% Similarity=0.096 Sum_probs=165.5
Q ss_pred ecCCCceeeeEeeehhhhhh-CCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce----EEEEec
Q 015220 158 ASDNFSSLRCRSTRIEYIRR-GKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT----MLYSIS 232 (411)
Q Consensus 158 ~sd~~s~L~cr~~~~~~i~~-gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys----~iysLs 232 (411)
.+-.|-++.+....-+..-+ .+. .. .--.+.|+.++.....+++..+.++.++|||+.... .+..+.
T Consensus 7 ~~sk~r~~~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~ 78 (402)
T 2aq5_A 7 RSSKFRHVFGQPAKADQCYEDVRV--SQ------TTWDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC 78 (402)
T ss_dssp -CCTTTTCEEEECCGGGSEESCCB--CC------CCCSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC
T ss_pred CCCCCccccCcCCChhhcEeccee--ec------CccCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe
Confidence 44456677777665442211 111 00 111245677766666666677889999999996643 334454
Q ss_pred cC--ceeEEEEe--CCEEEEEEecCCCceeeEEEEecCC-------cEEeEeeeccccCCcceeeeeecce---eEEeec
Q 015220 233 DK--NVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDG-------TVLKSFNHLLHRNKKVDFIEQFNEK---LLVKQE 298 (411)
Q Consensus 233 ~~--~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG-------~~L~t~~~LL~h~K~I~FLE~~~ek---llIKQe 298 (411)
++ .|..+.++ ++.+|++.... --|+||++.++ +.+.+ +-+|..+|..++.+++. ++....
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~d---g~v~vw~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSED---CTVMVWEIPDGGLVLPLREPVIT---LEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETT---SEEEEEECCTTCCSSCBCSCSEE---EECCSSCEEEEEECSSBTTEEEEEET
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCC---CeEEEEEccCCCCccccCCceEE---ecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 44 89999999 57788887644 34999999999 55666 66899999999999985 345567
Q ss_pred CceeeEEEcccceEEEeeccc--cCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeee-ccccccCCCCccce
Q 015220 299 NENLQILDVRNFELTEVSRTE--FMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSF-EDHLLWHPDCNTNN 370 (411)
Q Consensus 299 ~~~LkI~dL~t~e~~~v~~T~--f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~-e~H~~~~~~c~~n~ 370 (411)
+..|+|||+.+++... +. ..|+..+.++..+ +.+++. .|++|++||++ |+.+.++ .+|.. ..+..
T Consensus 153 dg~i~iwd~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~ 225 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVL---TLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG----TRPVH 225 (402)
T ss_dssp TSCEEEEETTTTEEEE---EECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS----SSCCE
T ss_pred CCEEEEEECCCCCccE---EEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC----CcceE
Confidence 8999999999999887 55 6799999998876 667777 79999999999 9999998 78876 24788
Q ss_pred EEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 371 IYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 371 i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+..+|||.++++|+.. ...|+|.+||+.+++.
T Consensus 226 ~~~~~~~~~l~~g~~~-------~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 226 AVFVSEGKILTTGFSR-------MSERQVALWDTKHLEE 257 (402)
T ss_dssp EEECSTTEEEEEEECT-------TCCEEEEEEETTBCSS
T ss_pred EEEcCCCcEEEEeccC-------CCCceEEEEcCccccC
Confidence 9999999999999421 1235999999999864
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.75 E-value=3e-16 Score=145.03 Aligned_cols=199 Identities=10% Similarity=0.082 Sum_probs=150.5
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCce-----------EEEEeccCc--------------eeEEEEe-CC--EEEE
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-----------MLYSISDKN--------------VQEIKIS-PG--IMLL 248 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-----------~iysLs~~~--------------VqeIkIS-dG--~~La 248 (411)
-+.|+. +|..|+.++.|+.++|||+.+.+ ++..+.++. |..++.+ ++ ..|+
T Consensus 33 ~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~ 111 (447)
T 3dw8_B 33 TVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFL 111 (447)
T ss_dssp EEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEE
T ss_pred EEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEE
Confidence 357774 89999999999999999999766 577887766 9999999 44 4566
Q ss_pred EEecCCCceeeEEEEecCCcEEeE-------------------------------------eeeccccCCcceeeeeecc
Q 015220 249 IFTKASGHVPLKILSIEDGTVLKS-------------------------------------FNHLLHRNKKVDFIEQFNE 291 (411)
Q Consensus 249 i~q~t~~~ipiKIl~I~tG~~L~t-------------------------------------~~~LL~h~K~I~FLE~~~e 291 (411)
+... --.|+||++.+++.... ..++.+|..+|..+..+++
T Consensus 112 s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 112 LSTN---DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEC---SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred EeCC---CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 6543 23589999998776321 0224589999999999987
Q ss_pred ee-EEeecCceeeEEEccc-ceEEEe----eccccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-Cce----eee
Q 015220 292 KL-LVKQENENLQILDVRN-FELTEV----SRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR-GEL----VTS 355 (411)
Q Consensus 292 kl-lIKQe~~~LkI~dL~t-~e~~~v----~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~-Gel----~~s 355 (411)
+. ++-..+..|+|||+.+ ++...+ +.+...|...+..+..+ ++++++ .|++|++||++ |++ +.+
T Consensus 189 ~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 268 (447)
T 3dw8_B 189 YETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKL 268 (447)
T ss_dssp SSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEE
T ss_pred CCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeE
Confidence 65 3334788999999994 444442 22566789999998876 578888 89999999999 887 789
Q ss_pred eccccccCCC-------CccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc-eeee
Q 015220 356 FEDHLLWHPD-------CNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF-VTCK 410 (411)
Q Consensus 356 ~e~H~~~~~~-------c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t-Gk~~ 410 (411)
|++|...... +.+..+..+|||++|++++. . +|+|||+.+ |+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~----------~v~iwd~~~~~~~~ 320 (447)
T 3dw8_B 269 FEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-L----------SVKVWDLNMENRPV 320 (447)
T ss_dssp ECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-S----------EEEEEETTCCSSCS
T ss_pred eccCCCccccccccccCceEEEEEECCCCCEEEEeeC-C----------eEEEEeCCCCcccc
Confidence 9988742111 27899999999999999987 6 999999998 7754
No 92
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.9e-16 Score=138.05 Aligned_cols=183 Identities=11% Similarity=0.101 Sum_probs=148.7
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCC---cEEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDG---TVLK 271 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG---~~L~ 271 (411)
+.| ++|..|+..+.|++++|||+.+.+.+..+.. ..|..+.++ +|.+|++..... .+++|++.+. +.+.
T Consensus 24 ~~~--~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~~~~~~~~~~~~~~~ 98 (313)
T 3odt_A 24 VVA--VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT---MINGVPLFATSGEDPLY 98 (313)
T ss_dssp EEE--EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS---CEEEEETTCCTTSCC-C
T ss_pred EEe--cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC---eEEEEEeeecCCCCccc
Confidence 456 6788899999999999999999998877764 489999999 888888876554 3677777665 5555
Q ss_pred EeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEee----ceeEEEE-ecCeEEEE
Q 015220 272 SFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE----NQLFLTF-RNRTVAVW 346 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~----sqlFlSf-sd~tI~iW 346 (411)
+ +-+|..+|..+...++.++....+..|++|| +++... +...|...+..+.. .+.+++. .|++|++|
T Consensus 99 ~---~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~---~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 99 T---LIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVY---NLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp E---ECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEE---EEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred c---hhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEE---ecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 5 6789999999999888889999999999999 666655 45556776666553 3667777 88999999
Q ss_pred ecCCceeeeecc-ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 347 NFRGELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 347 n~~Gel~~s~e~-H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
| .+..+..+.. |.. .+..+..+||+. +++++.|. +|.+||+.+|+++
T Consensus 171 d-~~~~~~~~~~~~~~-----~i~~~~~~~~~~-~~~~~~dg----------~i~i~d~~~~~~~ 218 (313)
T 3odt_A 171 Q-NDKVIKTFSGIHND-----VVRHLAVVDDGH-FISCSNDG----------LIKLVDMHTGDVL 218 (313)
T ss_dssp E-TTEEEEEECSSCSS-----CEEEEEEEETTE-EEEEETTS----------EEEEEETTTCCEE
T ss_pred e-cCceEEEEeccCcc-----cEEEEEEcCCCe-EEEccCCC----------eEEEEECCchhhh
Confidence 9 6678888887 766 899999999999 88998886 9999999999875
No 93
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=1.4e-15 Score=135.74 Aligned_cols=240 Identities=12% Similarity=0.078 Sum_probs=168.9
Q ss_pred CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEee-CCCCeEEE
Q 015220 134 TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFD-DVNGKVLT 209 (411)
Q Consensus 134 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFD-d~NGkiLt 209 (411)
.+...|.++-++...+.|++.+ .|. .++...+.-.. +.++ ...-.|.+ -+.|. +.+|..|+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~---~dg--~i~iw~~~~~~--------~~~~--~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCS---SDK--TIKIFEVEGET--------HKLI--DTLTGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEE---TTS--CEEEEEEETTE--------EEEE--EEECCCSSCEEEEEECCGGGCSEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEE---CCC--cEEEEecCCCc--------ceee--eEecCCCCcEEEEEeCCCCCCCEEE
Confidence 3556688888888777665533 222 23333321000 0000 00112333 34564 33589999
Q ss_pred eecCCCeEEEEEeeCce--EEEEeccC--ceeEEEEe-C--CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCc
Q 015220 210 YSAQDSIYKVFDLKNYT--MLYSISDK--NVQEIKIS-P--GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (411)
Q Consensus 210 ~~~~ds~ykVWdL~~Ys--~iysLs~~--~VqeIkIS-d--G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~ 282 (411)
....|++++|||+.+.+ .+..+..+ .|..+.++ + |.+|++..... .|+||++.+++...... +.+|..+
T Consensus 74 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~-~~~~~~~ 149 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG---KVSVVEFKENGTTSPII-IDAHAIG 149 (379)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS---EEEEEECCTTSCCCEEE-EECCTTC
T ss_pred EeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC---cEEEEecCCCCceeeEE-ecCCCCc
Confidence 99999999999999987 77777644 89999999 4 67777765433 68999999996655443 5688999
Q ss_pred ceeeeeec---------------ceeEEeecCceeeEEEcccceEE-EeeccccCCCceEEEEeec------eeEEEE-e
Q 015220 283 VDFIEQFN---------------EKLLVKQENENLQILDVRNFELT-EVSRTEFMTPSAFIFLYEN------QLFLTF-R 339 (411)
Q Consensus 283 I~FLE~~~---------------ekllIKQe~~~LkI~dL~t~e~~-~v~~T~f~hpsAfifLy~s------qlFlSf-s 339 (411)
|..+..++ ..++....+..|++||+.+++.. ....+...|...+..+..+ ++++++ .
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 99999987 23455668899999999986533 2334667788888888864 567777 7
Q ss_pred cCeEEEEecC-Cc-----eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 340 NRTVAVWNFR-GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 340 d~tI~iWn~~-Ge-----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
|++|++||++ |+ .+.....|.. .+..+..+|||++|++++.|. +|.|||+.++
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l~~~~~dg----------~i~iw~~~~~ 288 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPD-----VLWRASWSLSGNVLALSGGDN----------KVTLWKENLE 288 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSS-----CEEEEEECSSSCCEEEEESSS----------SEEEEEEEET
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCC-----cEEEEEEcCCCCEEEEecCCC----------cEEEEeCCCC
Confidence 9999999999 53 2223333554 789999999999999999986 9999999864
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.75 E-value=1.1e-16 Score=144.37 Aligned_cols=188 Identities=13% Similarity=0.134 Sum_probs=149.2
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEe---------------ccCceeEEEEe--CCEEEEEEecCCCceeeE
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI---------------SDKNVQEIKIS--PGIMLLIFTKASGHVPLK 260 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysL---------------s~~~VqeIkIS--dG~~Lai~q~t~~~ipiK 260 (411)
+.|...+|+.|+.++.|++++|||+.+.+.+..+ ....|..+..+ ++.+|++.... -.|+
T Consensus 49 ~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---~~i~ 125 (408)
T 4a11_B 49 LDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD---KTLK 125 (408)
T ss_dssp EEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT---SEEE
T ss_pred EEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC---CeEE
Confidence 5677669999999999999999999997755433 23489999998 45566665432 3699
Q ss_pred EEEecCCcEEeEeeeccccCCcceeeeeecc-----eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---
Q 015220 261 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE-----KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN--- 332 (411)
Q Consensus 261 Il~I~tG~~L~t~~~LL~h~K~I~FLE~~~e-----kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s--- 332 (411)
||++.+++.+..+. +..++..+...+. .++....+..|++||+.+++... +...|...+.++..+
T Consensus 126 iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~---~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 126 VWDTNTLQTADVFN----FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH---ILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp EEETTTTEEEEEEE----CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE---EECCCCSCEEEEEECSSC
T ss_pred EeeCCCCccceecc----CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee---eecCCCCcEEEEEECCCC
Confidence 99999999998854 4556666666553 45777788999999999998876 666789999888876
Q ss_pred e-eEEEE-ecCeEEEEecC-Cc-eeeee---------------ccccccCCCCccceEEEcCCCCEEEEEecCCCCCccc
Q 015220 333 Q-LFLTF-RNRTVAVWNFR-GE-LVTSF---------------EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (411)
Q Consensus 333 q-lFlSf-sd~tI~iWn~~-Ge-l~~s~---------------e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~ 393 (411)
+ +|+++ .|++|++||++ ++ .+..+ .+|.. .+..+..+|||+.|++++.|.
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg------ 267 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNG-----KVNGLCFTSDGLHLLTVGTDN------ 267 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSS-----CEEEEEECTTSSEEEEEETTS------
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccC-----ceeEEEEcCCCCEEEEecCCC------
Confidence 3 68788 88999999998 54 55566 45555 789999999999999999987
Q ss_pred cCCceEEEeeecceeee
Q 015220 394 EGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 394 ~~~gtI~i~~i~tGk~~ 410 (411)
+|.+||+.+|+..
T Consensus 268 ----~i~vwd~~~~~~~ 280 (408)
T 4a11_B 268 ----RMRLWNSSNGENT 280 (408)
T ss_dssp ----CEEEEETTTCCBC
T ss_pred ----eEEEEECCCCccc
Confidence 9999999998753
No 95
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.74 E-value=1.1e-16 Score=159.25 Aligned_cols=181 Identities=13% Similarity=0.068 Sum_probs=116.8
Q ss_pred CCeEEEeec--CCCeEEEEEe-eCceEEEEeccC--ceeEEEEe----CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 204 NGKVLTYSA--QDSIYKVFDL-KNYTMLYSISDK--NVQEIKIS----PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 204 NGkiLt~~~--~ds~ykVWdL-~~Ys~iysLs~~--~VqeIkIS----dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+|+.+..+. +|+.+++|++ .+.+.+.++..+ +|..+++| ||-.|+... .--.|||||+.||++++++.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS---~D~TIkIWDl~TGk~l~tL~ 220 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT---IMNNIVIWNLKTGQLLKKMH 220 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE---TTSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec---CCCcEEEEECCCCcEEEEEc
Confidence 444444422 4555555555 224444443322 33333333 123333322 34579999999999999953
Q ss_pred eccccCC---cceeeeeecceeEE--------------eecCceeeEEEcccceEEEeecc--ccCCCceEEEEee-cee
Q 015220 275 HLLHRNK---KVDFIEQFNEKLLV--------------KQENENLQILDVRNFELTEVSRT--EFMTPSAFIFLYE-NQL 334 (411)
Q Consensus 275 ~LL~h~K---~I~FLE~~~ekllI--------------KQe~~~LkI~dL~t~e~~~v~~T--~f~hpsAfifLy~-sql 334 (411)
+|.. -+..++.++++.++ -+.+..|++||..+++.+.+..- .-+|...|+.... ..+
T Consensus 221 ---g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~ 297 (356)
T 2w18_A 221 ---IDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHC 297 (356)
T ss_dssp ---CCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTE
T ss_pred ---CCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCE
Confidence 4433 34334678888766 24678999999999998763210 1244444443322 256
Q ss_pred EEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeee
Q 015220 335 FLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 335 FlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
.+++ .|+||+|||+. |+++.+|++|... .+..++.||||++|+|||.|+ ||+|||+
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~tL~gH~~~----vvs~vafSPDG~~LaSGS~D~----------TIklWd~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTALLPPVSDQ----HWSFVKWSGTDSHLLAGQKDG----------NIFVYHY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEEECCC--C----CCCEEEECSSSSEEEEECTTS----------CEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEecCCCCC----eEEEEEECCCCCEEEEEECCC----------cEEEecC
Confidence 7888 69999999999 9999999999871 234589999999999999998 9999996
No 96
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.74 E-value=4.9e-17 Score=154.52 Aligned_cols=190 Identities=10% Similarity=0.063 Sum_probs=146.5
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceE--EEEeccC--ceeEEEEe--CCEEEEEEecCCCceeeEEEEecCCcEEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISDK--NVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs~~--~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG~~L~ 271 (411)
+.|...++.+|+.++.|++++|||+.+.+. +.++.++ .|..++++ ||.+|+....-. -|+|||++++....
T Consensus 125 l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~---~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 125 LAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG---TTRLQDFKGNILRV 201 (435)
T ss_dssp EEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS---CEEEEETTSCEEEE
T ss_pred EEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC---EEEEeeccCCceeE
Confidence 677777889999999999999999988764 4444444 89999998 577777765433 38999998775543
Q ss_pred EeeeccccCCcceeeeeecceeEEe--ecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEE
Q 015220 272 SFNHLLHRNKKVDFIEQFNEKLLVK--QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVA 344 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ekllIK--Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~ 344 (411)
. ...-.+...+..+..++++.+|. ..+..|++||+...+.. ++.+|...+..+..+ .+|+++ .|++|+
T Consensus 202 ~-~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~----~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 202 F-ASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELW----NLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp E-ECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCC----CSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred E-eccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeE----EEecccceEEeeeecCCCceEEEEecCcceee
Confidence 3 22223344567788888776555 46779999999765543 677899999999875 578788 789999
Q ss_pred EEecC-Cceee---eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 345 VWNFR-GELVT---SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 345 iWn~~-Gel~~---s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|||++ ++... ...+|.. .++.++.+|||..|+|+|.|. +|+|||+.+|++.
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~-----~v~~~~~spdg~~l~s~~~D~----------~i~iwd~~~~~~~ 331 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRH-----PVNAACFSPDGARLLTTDQKS----------EIRVYSASQWDCP 331 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSS-----CEEECCBCTTSSEEEEEESSS----------CEEEEESSSSSSE
T ss_pred EEecccccccceEEEeeeccc-----cccceeECCCCCeeEEEcCCC----------EEEEEECCCCccc
Confidence 99998 65443 4467877 789999999999999999997 9999999999864
No 97
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.74 E-value=9.4e-16 Score=135.85 Aligned_cols=266 Identities=9% Similarity=0.018 Sum_probs=185.2
Q ss_pred ccceEEEeecc-----ceehhhhccccceeeeccc-ccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeE
Q 015220 95 RSKIIEIVAAR-----DIVFALAQSGVCAAFCRET-NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCR 168 (411)
Q Consensus 95 RS~V~EIv~a~-----dii~~L~~sG~c~af~~~t-~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr 168 (411)
...|.-+-+.. .++++-...|....||..+ ++.+...-..+..-|.++-++...+-|++.| .|. .++.-
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~---~dg--~v~iw 113 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS---CDK--TAKMW 113 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE---TTS--EEEEE
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc---CCC--cEEEE
Confidence 45566666654 4677778889999999988 6666344445677789999998776666543 232 23332
Q ss_pred eeehhhhhhCCCCCCCcceeecccCCCC---eEEee-CCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEeC
Q 015220 169 STRIEYIRRGKPDAGFALFESESLKWPG---FVEFD-DVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKISP 243 (411)
Q Consensus 169 ~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFD-d~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkISd 243 (411)
++..++ .+. ...|++ -+.|. .++|..|+++..|++++|||+++.+++.++..+ .+..+..++
T Consensus 114 -----d~~~~~-----~~~---~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 180 (368)
T 3mmy_A 114 -----DLSSNQ-----AIQ---IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY 180 (368)
T ss_dssp -----ETTTTE-----EEE---EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET
T ss_pred -----EcCCCC-----cee---eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC
Confidence 222222 111 112333 34553 788999999999999999999999999888855 677777775
Q ss_pred CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeee------cceeEEeecCceeeEEEcccceEEEeec
Q 015220 244 GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF------NEKLLVKQENENLQILDVRNFELTEVSR 317 (411)
Q Consensus 244 G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~------~ekllIKQe~~~LkI~dL~t~e~~~v~~ 317 (411)
..+++.... -.+.+|++.++....... ...+..++..+..+ ++.++....+..++|||+.+........
T Consensus 181 ~~~~~~~~~----~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~ 255 (368)
T 3mmy_A 181 PMAVVATAE----RGLIVYQLENQPSEFRRI-ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNF 255 (368)
T ss_dssp TEEEEEEGG----GCEEEEECSSSCEEEEEC-CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSE
T ss_pred CeeEEEeCC----CcEEEEEeccccchhhhc-cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccce
Confidence 554443332 248999999876655422 12233444445443 2338899999999999999874311111
Q ss_pred cccCCCc------------eEEEEeec---eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEE
Q 015220 318 TEFMTPS------------AFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (411)
Q Consensus 318 T~f~hps------------AfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~i 380 (411)
+.-.|.. ++..++.+ ++++++ .|++|++||++ |+++.++.+|.. .++.+..+|||++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~s~~g~~l 330 (368)
T 3mmy_A 256 TFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ-----PISACCFNHNGNIF 330 (368)
T ss_dssp EEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS-----CEEEEEECTTSSCE
T ss_pred eeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC-----CceEEEECCCCCeE
Confidence 3444544 67777766 678888 89999999999 999999999988 89999999999999
Q ss_pred EEEecCCC
Q 015220 381 ISYCKADS 388 (411)
Q Consensus 381 iS~~~d~~ 388 (411)
++++.|+.
T Consensus 331 ~~~s~d~~ 338 (368)
T 3mmy_A 331 AYASSYDW 338 (368)
T ss_dssp EEEECCCS
T ss_pred EEEecccc
Confidence 99999863
No 98
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.74 E-value=2.5e-16 Score=146.54 Aligned_cols=190 Identities=11% Similarity=0.137 Sum_probs=146.5
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCc-------eEEEEeccC--ceeEEEEe-CC-EEEEEEecCCCceeeEEEEec
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNY-------TMLYSISDK--NVQEIKIS-PG-IMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Y-------s~iysLs~~--~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~ 265 (411)
-+.|...+|..|+.++.|++++|||+.+. +++.++..+ .|..+..+ +| .+|++..... -|+||++.
T Consensus 86 ~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg---~i~iwd~~ 162 (402)
T 2aq5_A 86 DIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN---VILVWDVG 162 (402)
T ss_dssp EEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS---CEEEEETT
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC---EEEEEECC
Confidence 35677668999999999999999999998 667777754 89999999 55 5677665433 48999999
Q ss_pred CCcEEeEeeeccccCCcceeeeeecce--eEEeecCceeeEEEcccceEEEeeccc-cCCC----ceEEEEeeceeEEEE
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNFELTEVSRTE-FMTP----SAFIFLYENQLFLTF 338 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e~~~v~~T~-f~hp----sAfifLy~sqlFlSf 338 (411)
+|+.+.++. ..+|..+|..+..++++ ++....+..|+|||+.+++... +. ..|. ....|....++++++
T Consensus 163 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 163 TGAAVLTLG-PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVA---EKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TTEEEEEEC-TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE---EEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred CCCccEEEe-cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceee---eeccCCCCCcceEEEEcCCCcEEEEe
Confidence 999999832 15789999999998765 4555678999999999999876 33 3444 334444445778887
Q ss_pred ----ecCeEEEEecC-Cce-eeeec-cccccCCCCccceEEEcCCCCEEE-EEecCCCCCccccCCceEEEeeeccee
Q 015220 339 ----RNRTVAVWNFR-GEL-VTSFE-DHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 339 ----sd~tI~iWn~~-Gel-~~s~e-~H~~~~~~c~~n~i~Is~Dqd~ii-S~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.|++|.+||++ ++. +..+. +|.. .+..++.+|||+.|+ +|+.|. +|.+||+.+|+
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~g~~dg----------~i~i~d~~~~~ 301 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQELDTSS-----GVLLPFFDPDTNIVYLCGKGDS----------SIRYFEITSEA 301 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEECCCCS-----SCEEEEEETTTTEEEEEETTCS----------CEEEEEECSST
T ss_pred ccCCCCceEEEEcCccccCCceEEeccCCC-----ceeEEEEcCCCCEEEEEEcCCC----------eEEEEEecCCC
Confidence 78999999999 553 44433 4444 688999999999996 555565 99999999987
No 99
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.74 E-value=1.9e-16 Score=168.82 Aligned_cols=194 Identities=15% Similarity=0.158 Sum_probs=158.3
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeec
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHL 276 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~L 276 (411)
+.|+ ++|+.|+.+..|++++|||..+.+.+..+.+. .|..+..++|.+|+..... --|+||++.+|++++++.
T Consensus 23 lafs-pdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fspg~~L~S~s~D---~~v~lWd~~~~~~~~~~~-- 96 (902)
T 2oaj_A 23 AAFD-FTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVKGIYLVVINAK---DTVYVLSLYSQKVLTTVF-- 96 (902)
T ss_dssp EEEE-TTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEETTTEEEEEETT---CEEEEEETTTCSEEEEEE--
T ss_pred EEEC-CCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcCCCEEEEEECc---CeEEEEECCCCcEEEEEc--
Confidence 4676 47899999999999999999999988888754 7999999988877766543 359999999999999853
Q ss_pred cccCCcceeeeeeccee--EEeecCceeeEEEcccceEEE--ee------ccccCCCceEEEEeec----eeEEEE-ecC
Q 015220 277 LHRNKKVDFIEQFNEKL--LVKQENENLQILDVRNFELTE--VS------RTEFMTPSAFIFLYEN----QLFLTF-RNR 341 (411)
Q Consensus 277 L~h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t~e~~~--v~------~T~f~hpsAfifLy~s----qlFlSf-sd~ 341 (411)
|..+|..++.+++.- +...++..+++||+.+++... ++ .+.-+|+..+..++.+ .+++++ .|+
T Consensus 97 --~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg 174 (902)
T 2oaj_A 97 --VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV 174 (902)
T ss_dssp --CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC
T ss_pred --CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCC
Confidence 457899999988765 555688999999999998642 21 3456788888888865 467777 889
Q ss_pred eEEEEecC-Cceeeeecccccc-------------CCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 342 TVAVWNFR-GELVTSFEDHLLW-------------HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 342 tI~iWn~~-Gel~~s~e~H~~~-------------~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+| +||++ ++++.+|..|..- +....++.+..+|||++|+|++.|. +|+|||+.+|
T Consensus 175 ~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg----------~i~lWd~~~g 243 (902)
T 2oaj_A 175 TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN----------SLVFWDANSG 243 (902)
T ss_dssp EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC----------CEEEEETTTC
T ss_pred cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC----------eEEEEECCCC
Confidence 99 99999 8899999988210 0123689999999999999999997 9999999999
Q ss_pred eee
Q 015220 408 TCK 410 (411)
Q Consensus 408 k~~ 410 (411)
+++
T Consensus 244 ~~~ 246 (902)
T 2oaj_A 244 HMI 246 (902)
T ss_dssp CEE
T ss_pred cEE
Confidence 975
No 100
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=9.8e-16 Score=153.35 Aligned_cols=184 Identities=11% Similarity=0.143 Sum_probs=149.6
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCC-cEEeEeeecccc
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDG-TVLKSFNHLLHR 279 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG-~~L~t~~~LL~h 279 (411)
+|+.|+....|++++|||+.+.+.+.++..+ .|..+..+ +|..|++.... -.++||+++++ +.... +-+|
T Consensus 66 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~---~~~~ 139 (814)
T 3mkq_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQT---FEGH 139 (814)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEE---EECC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEE---EcCC
Confidence 5677888888999999999999999999855 79999999 88788776543 46899999998 55555 5589
Q ss_pred CCcceeeeeec-ce--eEEeecCceeeEEEcccceEEEeeccccCCCceEEEEee-----ceeEEEE-ecCeEEEEecC-
Q 015220 280 NKKVDFIEQFN-EK--LLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-----NQLFLTF-RNRTVAVWNFR- 349 (411)
Q Consensus 280 ~K~I~FLE~~~-ek--llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~-----sqlFlSf-sd~tI~iWn~~- 349 (411)
+.+|..+..++ ++ ++....+..|++||+.+++......+. ++..+.++.. .+.++++ .|++|.+||++
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG--QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC--CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC--CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC
Confidence 99999999987 43 466678899999999988766532222 2244444433 3567777 89999999999
Q ss_pred CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 350 GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 350 Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|+++.++.+|.. .+..+..+|||++|++++.|. +|.+||+.+|+++
T Consensus 218 ~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg----------~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 218 KSCVATLEGHMS-----NVSFAVFHPTLPIIISGSEDG----------TLKIWNSSTYKVE 263 (814)
T ss_dssp TEEEEEEECCSS-----CEEEEEECSSSSEEEEEETTS----------CEEEEETTTCSEE
T ss_pred CcEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCC----------eEEEEECCCCcEE
Confidence 999999999988 899999999999999999886 9999999999864
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.73 E-value=4.6e-16 Score=155.71 Aligned_cols=189 Identities=12% Similarity=0.126 Sum_probs=158.5
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+.|. ++|..|+....+++++|||+.+.+.+.+++.+ .|..+..| +|..|++.... -.|+||++.+|+.+.+
T Consensus 19 i~~s-p~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~-- 92 (814)
T 3mkq_A 19 IDFH-PTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGEKVVD-- 92 (814)
T ss_dssp EEEC-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCCEEEE--
T ss_pred EEEC-CCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEE--
Confidence 4454 47888999999999999999999999998854 79999999 88888887653 4689999999999998
Q ss_pred eccccCCcceeeeeecce--eEEeecCceeeEEEcccc-eEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEEEE
Q 015220 275 HLLHRNKKVDFIEQFNEK--LLVKQENENLQILDVRNF-ELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVAVW 346 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ek--llIKQe~~~LkI~dL~t~-e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~iW 346 (411)
+-+|..+|..+..++++ ++....+..|++||+.++ .... +..+|+..+.++..+ +.+++. .|++|.+|
T Consensus 93 -~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 93 -FEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ---TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp -EECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE---EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred -EecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE---EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 55799999999999887 455667889999999997 5544 566788888887754 567777 78999999
Q ss_pred ecC-CceeeeeccccccCCCCccceEEEcC--CCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 347 NFR-GELVTSFEDHLLWHPDCNTNNIYITS--DQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 347 n~~-Gel~~s~e~H~~~~~~c~~n~i~Is~--Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|++ ++...++..|.. ..++.+..+| |+.+|++++.|. +|.+||+.+|+++
T Consensus 169 d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg----------~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 169 SLGQSTPNFTLTTGQE----RGVNYVDYYPLPDKPYMITASDDL----------TIKIWDYQTKSCV 221 (814)
T ss_dssp ETTCSSCSEEEECCCT----TCCCEEEECCSTTCCEEEEECTTS----------EEEEEETTTTEEE
T ss_pred ECCCCcceeEEecCCC----CCEEEEEEEECCCCCEEEEEeCCC----------EEEEEECCCCcEE
Confidence 998 888888877652 3788999999 999999999886 9999999999875
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.73 E-value=3.7e-16 Score=148.74 Aligned_cols=192 Identities=13% Similarity=0.114 Sum_probs=151.1
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCce---EEEEeccC---------------------------------------
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISDK--------------------------------------- 234 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys---~iysLs~~--------------------------------------- 234 (411)
.+.|. ++|+.|+. +.++.++|||+.+.+ .+.+..++
T Consensus 9 ~v~~s-~dg~~l~~-~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (450)
T 2vdu_B 9 NLLTS-RDGSLVFA-IIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKR 86 (450)
T ss_dssp EEEEC-SSSSEEEE-EETTEEEEEEEETTTEEEEEEEEECCC--------------------------------------
T ss_pred EEEec-CCCCEEEE-EeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccc
Confidence 45564 56775554 467899999999998 77666532
Q ss_pred -----------------ceeEEEEe-CCEEE-EEEecCCCceeeEEEEec--CCcEEeEeeeccccCCcceeeeeeccee
Q 015220 235 -----------------NVQEIKIS-PGIML-LIFTKASGHVPLKILSIE--DGTVLKSFNHLLHRNKKVDFIEQFNEKL 293 (411)
Q Consensus 235 -----------------~VqeIkIS-dG~~L-ai~q~t~~~ipiKIl~I~--tG~~L~t~~~LL~h~K~I~FLE~~~ekl 293 (411)
.|..+.+| +|.+| ++.... -.|+||++. +|+.+..+.. ..+..+|..+..++++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~d---g~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 87 TAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSD---KSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -------------CCCCCEEEEEECTTSSEEEEEEGGG---TEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTTSS
T ss_pred cCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCC---CeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCCCC
Confidence 48899999 88876 555432 348999999 9999988552 25678899999998764
Q ss_pred --EEeecCceeeEEEcccceEEE-eeccccCCCceEEEEeec------eeEEEE-ecCeEEEEecC-Cceeee-eccccc
Q 015220 294 --LVKQENENLQILDVRNFELTE-VSRTEFMTPSAFIFLYEN------QLFLTF-RNRTVAVWNFR-GELVTS-FEDHLL 361 (411)
Q Consensus 294 --lIKQe~~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~s------qlFlSf-sd~tI~iWn~~-Gel~~s-~e~H~~ 361 (411)
+....+..+.+||+.+++... ...+..+|...+.++..+ ++++++ .|++|++||++ |.++.+ +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 555677889999999987653 333666788888887754 367787 88999999999 888887 679988
Q ss_pred cCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 362 WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 362 ~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.++.+.++ ||++|+|++.|. +|+|||+.+|+++
T Consensus 243 -----~v~~~~~s-d~~~l~s~~~d~----------~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 243 -----FVSSICCG-KDYLLLSAGGDD----------KIFAWDWKTGKNL 275 (450)
T ss_dssp -----CEEEEEEC-STTEEEEEESSS----------EEEEEETTTCCEE
T ss_pred -----ceEEEEEC-CCCEEEEEeCCC----------eEEEEECCCCcEe
Confidence 89999999 999999999887 9999999999975
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.73 E-value=4.1e-16 Score=164.96 Aligned_cols=192 Identities=15% Similarity=0.154 Sum_probs=155.2
Q ss_pred EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 199 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 199 EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
.|. ++|+.|++++.|++++|||+.+.+.+.++..+ .|..+.+| ||.+|++..... -|+||++.+|+.+.+
T Consensus 622 ~~s-~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~---~v~vwd~~~~~~~~~--- 694 (1249)
T 3sfz_A 622 CFS-QDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADK---KVKIWDSATGKLVHT--- 694 (1249)
T ss_dssp EEC-TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTCCEEEE---
T ss_pred EEC-CCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCC---eEEEEECCCCceEEE---
Confidence 565 58999999999999999999999999999965 89999999 888888876433 499999999999999
Q ss_pred ccccCCcceeeeeec--ceeE--EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEe
Q 015220 276 LLHRNKKVDFIEQFN--EKLL--VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWN 347 (411)
Q Consensus 276 LL~h~K~I~FLE~~~--ekll--IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn 347 (411)
+-+|..+|..+..++ +..+ ..+.+..|++||+.+++... +..+|...+.++..+ +.++|+ .|++|++||
T Consensus 695 ~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~---~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN---TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp EECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE---EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred EcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhh---eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 458999999999988 4444 44678899999999999887 788899999988876 678888 889999999
Q ss_pred cC-Cceeeeecccc-------------------cc-------------------------------CCCCccceEEEcCC
Q 015220 348 FR-GELVTSFEDHL-------------------LW-------------------------------HPDCNTNNIYITSD 376 (411)
Q Consensus 348 ~~-Gel~~s~e~H~-------------------~~-------------------------------~~~c~~n~i~Is~D 376 (411)
++ |+...++.... .| .....+..+..+||
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 851 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY 851 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence 98 76665543211 01 11225667777888
Q ss_pred CCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 377 QDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 377 qd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|.++++++.|. +|.+||+.+|+++
T Consensus 852 ~~~l~~~~~dg----------~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 852 DHLAVIALSQY----------CVELWNIDSRLKV 875 (1249)
T ss_dssp TTEEEEECSSS----------CEEEEETTTTEEE
T ss_pred CCEEEEEeCCC----------eEEEEEcCCCcee
Confidence 88888887765 9999999999864
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.71 E-value=1.4e-15 Score=144.75 Aligned_cols=193 Identities=12% Similarity=0.198 Sum_probs=153.3
Q ss_pred EEeeCCCCeEE-EeecCCCeEEEEEee--CceEEEEec----cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 198 VEFDDVNGKVL-TYSAQDSIYKVFDLK--NYTMLYSIS----DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 198 vEFDd~NGkiL-t~~~~ds~ykVWdL~--~Ys~iysLs----~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
+.|. ++|+.| +.+..|++++|||+. +.+++..+. ...|..+.++ +|.+|++... ..-+.+|++.+++.
T Consensus 108 ~~~s-~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v~~~~~~~~~~ 183 (450)
T 2vdu_B 108 LRLT-SDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDVYSIDINSIPE 183 (450)
T ss_dssp EEEC-TTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETTSCCC
T ss_pred EEEc-CCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcEEEEecCCccc
Confidence 5565 466665 778899999999999 888888875 2479999999 8888888754 33479999999987
Q ss_pred Ee-EeeeccccCCcceeeeeecc---e--eEEeecCceeeEEEcccceEEEeecc-ccCCCceEEEEeec--eeEEEE-e
Q 015220 270 LK-SFNHLLHRNKKVDFIEQFNE---K--LLVKQENENLQILDVRNFELTEVSRT-EFMTPSAFIFLYEN--QLFLTF-R 339 (411)
Q Consensus 270 L~-t~~~LL~h~K~I~FLE~~~e---k--llIKQe~~~LkI~dL~t~e~~~v~~T-~f~hpsAfifLy~s--qlFlSf-s 339 (411)
.. ....+.+|..+|..+..+++ + ++....+..|++||+.+++... + ..+|...+..+..+ ++++|+ .
T Consensus 184 ~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~sd~~~l~s~~~ 260 (450)
T 2vdu_B 184 EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD---KWLFGHKHFVSSICCGKDYLLLSAGG 260 (450)
T ss_dssp SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE---EECCCCSSCEEEEEECSTTEEEEEES
T ss_pred ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee---eeecCCCCceEEEEECCCCEEEEEeC
Confidence 75 22236789999999999998 4 5566788999999999998776 4 55788888887764 677787 8
Q ss_pred cCeEEEEecC-Cceeeeecccccc--------------------CCCCccceEEEcCCCCEEEEEe-cCCCCCccccCCc
Q 015220 340 NRTVAVWNFR-GELVTSFEDHLLW--------------------HPDCNTNNIYITSDQDLIISYC-KADSDDPLAEGNG 397 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H~~~--------------------~~~c~~n~i~Is~Dqd~iiS~~-~d~~~~~~~~~~g 397 (411)
|++|++||++ |+++.++..|..- ..+-.+..|..+||+++|++++ .+.
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~---------- 330 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATK---------- 330 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCS----------
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCC----------
Confidence 8999999999 9999988755311 1123577899999999999999 554
Q ss_pred eEEEeee--cce
Q 015220 398 KLFVSLL--MFV 407 (411)
Q Consensus 398 tI~i~~i--~tG 407 (411)
+|+|||+ .++
T Consensus 331 ~i~iw~~~~~~~ 342 (450)
T 2vdu_B 331 CIIILEMSEKQK 342 (450)
T ss_dssp EEEEEEECSSST
T ss_pred eEEEEEeccCCC
Confidence 9999999 665
No 105
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.70 E-value=9e-16 Score=144.38 Aligned_cols=186 Identities=11% Similarity=0.133 Sum_probs=142.8
Q ss_pred CCeEEEeecCCCeEEEEEeeCceE----EEEec-------cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEe
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTM----LYSIS-------DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~----iysLs-------~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~ 271 (411)
++..|.....|+++|+|++.+.+. +.... ++.+..+++| ||.+|++...... --|+|||+++|+++.
T Consensus 93 ~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d-~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 93 NSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVP-AIMRIIDPSDLTEKF 171 (365)
T ss_dssp CHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSS-CEEEEEETTTTEEEE
T ss_pred CccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCC-CEEEEeECCCCcEEE
Confidence 334444556689999999987542 22222 1247789999 9999988764332 358999999999998
Q ss_pred EeeeccccCCcceeeeeecceeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecC----e
Q 015220 272 SFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNR----T 342 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~----t 342 (411)
+ +.|..+|.-+..++++.++.. .+..+.+|+..+++... ..+...|...+..++.+ +.+++. .++ +
T Consensus 172 ~----~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~ 246 (365)
T 4h5i_A 172 E----IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIA-RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIV 246 (365)
T ss_dssp E----EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEE-EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEE
T ss_pred E----eCCCCceEEEEEccCCceEEeccceeEEEEEeccCccee-eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeE
Confidence 8 356789999999999876654 56789999999988654 23667788888777765 777777 555 6
Q ss_pred EEEEecC-Cc----eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 343 VAVWNFR-GE----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 343 I~iWn~~-Ge----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.+|+.. +. ....+.+|.. .++.+++||||++|++||.|. +|+|||+.||+++
T Consensus 247 i~~~~~~~~~~~~~~~~~~~~~~~-----~V~~~~~Spdg~~lasgs~D~----------~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 247 LTKISIKSGNTSVLRSKQVTNRFK-----GITSMDVDMKGELAVLASNDN----------SIALVKLKDLSMS 304 (365)
T ss_dssp EEEEEEETTEEEEEEEEEEESSCS-----CEEEEEECTTSCEEEEEETTS----------CEEEEETTTTEEE
T ss_pred EeecccccceecceeeeeecCCCC-----CeEeEEECCCCCceEEEcCCC----------EEEEEECCCCcEE
Confidence 8999987 33 2347888887 799999999999999999997 9999999999985
No 106
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.70 E-value=2.3e-16 Score=143.40 Aligned_cols=174 Identities=7% Similarity=0.003 Sum_probs=131.1
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCce---EEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE--
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYT---MLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV-- 269 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys---~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~-- 269 (411)
+.|. ++|+.|++.+.|++++|||+.+.+ ++..+..+ .|..+.++ +|.+|++..... .|+||++.+++.
T Consensus 61 ~~~s-~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~iwd~~~~~~~~ 136 (377)
T 3dwl_C 61 VDWA-PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR---VISVCYFEQENDWW 136 (377)
T ss_dssp EEEC-TTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS---CEEECCC-----CC
T ss_pred EEEe-CCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC---eEEEEEECCcccce
Confidence 3454 468889999999999999999976 77777644 89999999 788777776543 489999999985
Q ss_pred -EeEeeeccc-cCCcceeeeeeccee--EEeecCceeeEEEccc------------------ceEEEeeccccCCCceEE
Q 015220 270 -LKSFNHLLH-RNKKVDFIEQFNEKL--LVKQENENLQILDVRN------------------FELTEVSRTEFMTPSAFI 327 (411)
Q Consensus 270 -L~t~~~LL~-h~K~I~FLE~~~ekl--lIKQe~~~LkI~dL~t------------------~e~~~v~~T~f~hpsAfi 327 (411)
++. +-+ |..+|..+..++++. +....+..|++||+.+ ++... +. .|...+.
T Consensus 137 ~~~~---~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~v~ 209 (377)
T 3dwl_C 137 VSKH---LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCA---EY-PSGGWVH 209 (377)
T ss_dssp CCEE---ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEE---CC-CCSSSEE
T ss_pred eeeE---eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhh---cc-cCCceEE
Confidence 444 455 899999999998864 4456788999999963 44443 55 8999999
Q ss_pred EEeec---eeEEEE-ecCeEEEEecC-Cce----eeeeccccccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 328 FLYEN---QLFLTF-RNRTVAVWNFR-GEL----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 328 fLy~s---qlFlSf-sd~tI~iWn~~-Gel----~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
.+..+ ++++++ .|++|++||++ |+. +.++.+|.. .+..+..+|||++|++|+.+.
T Consensus 210 ~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~ 273 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQL-----PLRSLLWANESAIVAAGYNYS 273 (377)
T ss_dssp EEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSS-----CEEEEEEEETTEEEEEESSSS
T ss_pred EEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCC-----ceEEEEEcCCCCEEEEEcCCc
Confidence 98876 677777 78999999999 777 889999988 799999999999999998765
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.70 E-value=2.6e-14 Score=132.29 Aligned_cols=262 Identities=11% Similarity=0.091 Sum_probs=183.1
Q ss_pred ceehhhhccccceeeecccccEEEEEeC----CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCC
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLNV----TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPD 181 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN~----s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~ 181 (411)
.++++-...|....||..+++.+..+.. .+...|.++-++..+.-+++ . +.+ ..++. .+ +..++
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s--~--~~d-~~v~~--~d---~~~~~-- 202 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVS--Q--MQA-NAVHV--FD---LKTLA-- 202 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE--E--GGG-TEEEE--EE---TTTCC--
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEE--E--CCC-CEEEE--EE---CCCce--
Confidence 4555555667788999999987765443 55668888888665443322 2 122 22222 22 22222
Q ss_pred CCCcceee-cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCc--
Q 015220 182 AGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGH-- 256 (411)
Q Consensus 182 ~~~~LF~~-~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~-- 256 (411)
++..- ..-..|..+.|+..+..+++.+..++++++||+++.+.+..+... .+..+.++ +|..|++.....+.
T Consensus 203 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 279 (433)
T 3bws_A 203 ---YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQE 279 (433)
T ss_dssp ---EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTC
T ss_pred ---EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccc
Confidence 12111 223457788998766667788878999999999999999988855 79999999 78677766654432
Q ss_pred ---eeeEEEEecCCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEcccceEEEeeccccCCCceEEEEe
Q 015220 257 ---VPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLY 330 (411)
Q Consensus 257 ---ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy 330 (411)
-.|++|++.+|+++..+ .+...+..+...+++ +++. ..+..+++||+.+++....- .+......++
T Consensus 280 ~~dg~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~----~~~~~~~~~~ 351 (433)
T 3bws_A 280 SGGGRLGIYSMDKEKLIDTI----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI----PVFDKPNTIA 351 (433)
T ss_dssp SCCEEEEEEETTTTEEEEEE----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE----ECSSSEEEEE
T ss_pred cCCCeEEEEECCCCcEEeec----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe----cCCCCCCeEE
Confidence 36999999999988874 344567778888775 5555 68899999999999887622 2445555666
Q ss_pred ec---e-eEEEEe---------------cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCC
Q 015220 331 EN---Q-LFLTFR---------------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDD 390 (411)
Q Consensus 331 ~s---q-lFlSfs---------------d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~ 390 (411)
.+ + ++++.. |++|.+||+. |+++..+..+. .+..+.++|||+.|++++.++
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~d--- 422 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN------QPTGLDVSPDNRYLVISDFLD--- 422 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSS------SEEEEEECTTSCEEEEEETTT---
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCC------CCceEEEcCCCCEEEEEECCC---
Confidence 54 3 444444 4699999998 99999888743 468899999999999887532
Q ss_pred ccccCCceEEEeeec
Q 015220 391 PLAEGNGKLFVSLLM 405 (411)
Q Consensus 391 ~~~~~~gtI~i~~i~ 405 (411)
|+|.+||+.
T Consensus 423 ------~~i~v~~~~ 431 (433)
T 3bws_A 423 ------HQIRVYRRD 431 (433)
T ss_dssp ------TEEEEEEET
T ss_pred ------CeEEEEEec
Confidence 499999986
No 108
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.69 E-value=4.3e-15 Score=136.11 Aligned_cols=177 Identities=10% Similarity=0.039 Sum_probs=134.4
Q ss_pred EEeecCCCeEEEEEee---------CceEEEEec-c--CceeEEEEeC---CEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 208 LTYSAQDSIYKVFDLK---------NYTMLYSIS-D--KNVQEIKISP---GIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 208 Lt~~~~ds~ykVWdL~---------~Ys~iysLs-~--~~VqeIkISd---G~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+++.+.|++++||+.. +.+.+..+. . ..|..+.+++ |.+++..... -.|+||++++|+.+..
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d---g~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR---GTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT---CCEEEEESSSSCEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC---CcEEEEECCCCcEEEE
Confidence 7788889999999666 444454444 1 2588888875 6666665533 3489999999999765
Q ss_pred eeeccccCCcceeeeeecceeEEee--cCceeeEEEcccceEE-EeeccccC-CCceEEEEeec---eeEEEEecCeEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELT-EVSRTEFM-TPSAFIFLYEN---QLFLTFRNRTVAV 345 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQ--e~~~LkI~dL~t~e~~-~v~~T~f~-hpsAfifLy~s---qlFlSfsd~tI~i 345 (411)
+ ..++..+|..+..++++.+++. .+..|+|||+++++.. . +.-. |...+..+..+ +.+++.++++|++
T Consensus 165 ~--~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~---~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~i 239 (343)
T 3lrv_A 165 H--SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASS---RFPVDEEAKIKEVKFADNGYWMVVECDQTVVC 239 (343)
T ss_dssp E--CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCE---ECCCCTTSCEEEEEECTTSSEEEEEESSBEEE
T ss_pred E--ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCcc---EEeccCCCCEEEEEEeCCCCEEEEEeCCeEEE
Confidence 2 2356668999999999887775 7899999999999876 3 4444 88999999876 6788888889999
Q ss_pred EecC-Cceeeeecc---ccccCCCCcc--ceEEEcCCCCEEEEEec-CCCCCccccCCceEEEeeecce
Q 015220 346 WNFR-GELVTSFED---HLLWHPDCNT--NNIYITSDQDLIISYCK-ADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 346 Wn~~-Gel~~s~e~---H~~~~~~c~~--n~i~Is~Dqd~iiS~~~-d~~~~~~~~~~gtI~i~~i~tG 407 (411)
||++ ++.+.+++. |.. .+ ..+..+|||++|++++. |. +|+||++.++
T Consensus 240 wd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~g~~l~~~s~~d~----------~i~v~~~~~~ 293 (343)
T 3lrv_A 240 FDLRKDVGTLAYPTYTIPEF-----KTGTVTYDIDDSGKNMIAYSNESN----------SLTIYKFDKK 293 (343)
T ss_dssp EETTSSTTCBSSCCCBC----------CCEEEEECTTSSEEEEEETTTT----------EEEEEEECTT
T ss_pred EEcCCCCcceeecccccccc-----cccceEEEECCCCCEEEEecCCCC----------cEEEEEEccc
Confidence 9999 777665554 544 33 35999999999999998 76 9999998654
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.68 E-value=8.8e-15 Score=130.03 Aligned_cols=255 Identities=8% Similarity=0.026 Sum_probs=180.1
Q ss_pred ceEEEeec--cceehhhhccccceeeeccccc----EEEEEeCCCCceEEEEEeecCCC-eEEEEEeEecCCCceeeeEe
Q 015220 97 KIIEIVAA--RDIVFALAQSGVCAAFCRETNQ----RICFLNVTADEVIRSLFYNKNND-SLITVSVYASDNFSSLRCRS 169 (411)
Q Consensus 97 ~V~EIv~a--~dii~~L~~sG~c~af~~~t~~----~ic~lN~s~~evIrsifyN~~n~-slI~vSv~~sd~~s~L~cr~ 169 (411)
.|..+-.. ..++++-...|....|+..+++ ..... ....-|.++-++.... .|++.+ .|. .++.-
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~---~dg--~i~~w- 84 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGT---VQG--EILKV- 84 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEE---TTS--CEEEE-
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEEEc---CCC--eEEEE-
Confidence 34444433 3466666778999999998887 55544 5667899999998766 565533 222 22222
Q ss_pred eehhhh-hhCCCCCCCcceeecccC--CCC---eEEeeCCCCeEEEeecCCCeEEEEEeeC---------ceEEEEeccC
Q 015220 170 TRIEYI-RRGKPDAGFALFESESLK--WPG---FVEFDDVNGKVLTYSAQDSIYKVFDLKN---------YTMLYSISDK 234 (411)
Q Consensus 170 ~~~~~i-~~gk~~~~~~LF~~~~l~--~Pg---fvEFDd~NGkiLt~~~~ds~ykVWdL~~---------Ys~iysLs~~ 234 (411)
++ ..++. ...-. |++ -+.|.. +..|++++.|+++++||+++ .+++.++.+.
T Consensus 85 ----d~~~~~~~--------~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 85 ----DLIGSPSF--------QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp ----CSSSSSSE--------EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred ----EeccCCce--------EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 22 22211 11111 333 467777 78888899999999999999 7777777644
Q ss_pred -ceeEEEEeCCEEEEEEecCCCceeeEEEEecC-CcEEeEeeeccccCCcceeeeeec-c--eeEEeecCceeeEEEccc
Q 015220 235 -NVQEIKISPGIMLLIFTKASGHVPLKILSIED-GTVLKSFNHLLHRNKKVDFIEQFN-E--KLLVKQENENLQILDVRN 309 (411)
Q Consensus 235 -~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~t-G~~L~t~~~LL~h~K~I~FLE~~~-e--kllIKQe~~~LkI~dL~t 309 (411)
.|..+.+++.. +++.... -.|+||++.+ ++...... ..++..+|..+..++ + .++....+..++|||+.+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~d---~~i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMNN---SQVQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp CCEEEEEECSSE-EEEEEST---TEEEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred CceEEEEecCCc-EEEEeCC---CeEEEEECCccccccceee-ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 89999999666 4444332 3589999999 77543222 457888999999987 4 346667889999999988
Q ss_pred c------eEEEeeccccCCCc---------eEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeeeccc-cccCCCCcc
Q 015220 310 F------ELTEVSRTEFMTPS---------AFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFEDH-LLWHPDCNT 368 (411)
Q Consensus 310 ~------e~~~v~~T~f~hps---------AfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e~H-~~~~~~c~~ 368 (411)
+ +... +.-.|.. .+..+..+ ++++++ .|++|++||++ |+++.++.+| .. .+
T Consensus 226 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~-----~v 297 (342)
T 1yfq_A 226 QGDDYNSSKRF---AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED-----SV 297 (342)
T ss_dssp TCCSTTCTTCE---EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS-----EE
T ss_pred CCcccccccce---eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC-----Cc
Confidence 6 4443 3334433 77777765 667777 78899999999 9999999998 77 67
Q ss_pred ceEEEcCCCCEEEEEecCCC
Q 015220 369 NNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 369 n~i~Is~Dqd~iiS~~~d~~ 388 (411)
..+. |||++|+|+|.|..
T Consensus 298 ~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 298 VKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEE--ECSSEEEEEEECTH
T ss_pred eEec--CCCCeEEEEecCCc
Confidence 8888 99999999999974
No 110
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.68 E-value=4.8e-16 Score=157.24 Aligned_cols=190 Identities=12% Similarity=0.042 Sum_probs=138.5
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceE----EEEeccC--ceeEEEEeC-------CEEEEEEecCCCceeeEEEEecCCc
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTM----LYSISDK--NVQEIKISP-------GIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~----iysLs~~--~VqeIkISd-------G~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
+++++++++.+.|++++|||+.+.++ .+++.++ .|..++.+| |.+||..... -.|+||++.+++
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~D---gtvrlWd~~~~~ 246 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQE---GTINFLEIIDNA 246 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETT---SCEEEEECCCCS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecC---CeEEEEEcCCCc
Confidence 68999999999999999999998764 3456643 799999995 4677776654 359999999886
Q ss_pred EE--------eEeeeccccCCcceeeeeeccee-EEeecCceeeEEEcccceE-EEeeccccCCCceEEEE--eec----
Q 015220 269 VL--------KSFNHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVRNFEL-TEVSRTEFMTPSAFIFL--YEN---- 332 (411)
Q Consensus 269 ~L--------~t~~~LL~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~t~e~-~~v~~T~f~hpsAfifL--y~s---- 332 (411)
.. .....+-+|+.+|..+..++++. ...+.+..++|||+.+++. .. +.-+|...+..+ +.+
T Consensus 247 ~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~---~~~~H~~~V~sv~~~~s~~g~ 323 (524)
T 2j04_B 247 TDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSF---YDQVHDSYILSVSTAYSDFED 323 (524)
T ss_dssp SSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSE---EEECSSSCEEEEEEECCTTSC
T ss_pred cccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceE---EeecccccEEEEEEEcCCCCC
Confidence 32 11112567889999999876654 5566889999999998742 22 455799999888 322
Q ss_pred eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 333 QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 333 qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|+|. .|++|+|||++ |+.+.++.+|... .++..|..+||++.++|++.|+ +|+|||+.+|+|+
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~---~~v~~v~fsp~~~~l~s~~~d~----------tv~lwd~~~~~~~ 390 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG---SNLVPVVYCPQIYSYIYSDGAS----------SLRAVPSRAAFAV 390 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSC---CSCCCEEEETTTTEEEEECSSS----------EEEEEETTCTTCC
T ss_pred eEEEEeccCCeEEEEECCCCCccccccccccc---CcccceEeCCCcCeEEEeCCCC----------cEEEEECcccccc
Confidence 689999 79999999998 8888899998741 2468899999999999999887 9999999999863
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.68 E-value=2e-14 Score=131.24 Aligned_cols=193 Identities=9% Similarity=0.067 Sum_probs=146.2
Q ss_pred CCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
|--+.|+.-..++++.+..+++++|||+.+.+++..+..+ .+..+.+| ||..|++.....+ .|++|++.+|+.+..
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~--~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASS--TLSVIDTTSNTVAGT 111 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCC--EEEEEECCCCeEEEE
Confidence 5567887655556678889999999999999999888844 89999999 7887777655443 489999999999887
Q ss_pred eeeccccCCcceeeeeecce--e-EEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-ecCeEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEK--L-LVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRTVA 344 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ek--l-lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~tI~ 344 (411)
+. +...+..+..++++ + +..++++.|++||+.+++....-.. + .....+..+ .+|++. .+++|.
T Consensus 112 ~~----~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~-~~~~~~~~~~dg~~l~~~~~~~~~v~ 183 (391)
T 1l0q_A 112 VK----TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV---G-RSPKGIAVTPDGTKVYVANFDSMSIS 183 (391)
T ss_dssp EE----CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---C-SSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred Ee----CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec---C-CCcceEEECCCCCEEEEEeCCCCEEE
Confidence 43 33567888888775 4 2345689999999999998773222 2 222333333 566777 788999
Q ss_pred EEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 345 VWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 345 iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+||++ |+.+..+..+. ....+.++|||+.|++++.+. .+|+|.+||+.+|+++
T Consensus 184 ~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~-------~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 184 VIDTVTNSVIDTVKVEA------APSGIAVNPEGTKAYVTNVDK-------YFNTVSMIDTGTNKIT 237 (391)
T ss_dssp EEETTTTEEEEEEECSS------EEEEEEECTTSSEEEEEEECS-------SCCEEEEEETTTTEEE
T ss_pred EEECCCCeEEEEEecCC------CccceEECCCCCEEEEEecCc-------CCCcEEEEECCCCeEE
Confidence 99999 77777776432 567899999999999998532 3469999999999874
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.68 E-value=1.2e-14 Score=138.35 Aligned_cols=256 Identities=9% Similarity=0.056 Sum_probs=173.5
Q ss_pred ccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCC--CCCCCcceeeccc-CCCCeEE
Q 015220 123 ETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK--PDAGFALFESESL-KWPGFVE 199 (411)
Q Consensus 123 ~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk--~~~~~~LF~~~~l-~~PgfvE 199 (411)
.++++.+..-..+..-|.+|-++..+..++.+ ...|. ..+...++...... .....+++.-..- ..+-.+.
T Consensus 115 ~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat--~~~dg----~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 188 (430)
T 2xyi_A 115 VCGKIEIEIKINHEGEVNRARYMPQNACVIAT--KTPSS----DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLS 188 (430)
T ss_dssp ---CEEEEEEEEESSCCSEEEEETTEEEEEEE--ECSSS----CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEE
T ss_pred CCCceEEEEEEcCCCcEEEEEECCCCCcEEEE--ECCCC----cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEE
Confidence 34454443333444556677777755455542 22222 23333332211100 0112344432211 1234577
Q ss_pred eeCCCCeEEEeecCCCeEEEEEeeCceE-------EEEeccC--ceeEEEEeC--CEEEEEEecCCCceeeEEEEecCC-
Q 015220 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTM-------LYSISDK--NVQEIKISP--GIMLLIFTKASGHVPLKILSIEDG- 267 (411)
Q Consensus 200 FDd~NGkiLt~~~~ds~ykVWdL~~Ys~-------iysLs~~--~VqeIkISd--G~~Lai~q~t~~~ipiKIl~I~tG- 267 (411)
|+..+...|+++..|++++|||+.+.+. ...+..+ .|..+..++ +.++++.... -.|+||++.++
T Consensus 189 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---g~i~i~d~~~~~ 265 (430)
T 2xyi_A 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD---QKLMIWDTRNNN 265 (430)
T ss_dssp ECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCSC
T ss_pred eCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC---CeEEEEECCCCC
Confidence 8765554888899999999999998321 3445444 799999994 5666665433 35899999998
Q ss_pred --cEEeEeeeccccCCcceeeeeecce---eEEeecCceeeEEEccc-ceEEEeeccccCCCceEEEEeec----eeEEE
Q 015220 268 --TVLKSFNHLLHRNKKVDFIEQFNEK---LLVKQENENLQILDVRN-FELTEVSRTEFMTPSAFIFLYEN----QLFLT 337 (411)
Q Consensus 268 --~~L~t~~~LL~h~K~I~FLE~~~ek---llIKQe~~~LkI~dL~t-~e~~~v~~T~f~hpsAfifLy~s----qlFlS 337 (411)
+.+.+ +-+|..+|..|..++++ ++....+..|++||+++ ++... +.-.|..++..+..+ .+|++
T Consensus 266 ~~~~~~~---~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~---~~~~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 266 TSKPSHT---VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH---SFESHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp SSSCSEE---EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE---EEECCSSCEEEEEECSSCTTEEEE
T ss_pred CCcceeE---eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE---EeecCCCCEEEEEECCCCCCEEEE
Confidence 46665 45889999999999865 34567789999999998 44444 555688888888876 46888
Q ss_pred E-ecCeEEEEecCC---------------ceeeeeccccccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEE
Q 015220 338 F-RNRTVAVWNFRG---------------ELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLF 400 (411)
Q Consensus 338 f-sd~tI~iWn~~G---------------el~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~ 400 (411)
. .|++|.||+++. +++..+.+|.. .++.+.++|++. +|+|++.|. +|.
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~l~s~s~dg----------~i~ 404 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTA-----KISDFSWNPNEPWIICSVSEDN----------IMQ 404 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSS-----CEEEEEECSSSTTEEEEEETTS----------EEE
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCC-----CceEEEECCCCCCEEEEEECCC----------CEE
Confidence 8 799999999984 78889999988 899999999999 999999887 999
Q ss_pred Eeeeccee
Q 015220 401 VSLLMFVT 408 (411)
Q Consensus 401 i~~i~tGk 408 (411)
||++.++.
T Consensus 405 iw~~~~~~ 412 (430)
T 2xyi_A 405 VWQMAENV 412 (430)
T ss_dssp EEEECHHH
T ss_pred EeEccccc
Confidence 99998754
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.67 E-value=4.2e-15 Score=153.54 Aligned_cols=184 Identities=14% Similarity=0.183 Sum_probs=152.6
Q ss_pred CCCeEEEeecCCCeEEEEEee--CceEEEEeccC--ceeEEEEe-C--CEEEEEEecCCCceeeEEEEecCCc--EEeEe
Q 015220 203 VNGKVLTYSAQDSIYKVFDLK--NYTMLYSISDK--NVQEIKIS-P--GIMLLIFTKASGHVPLKILSIEDGT--VLKSF 273 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~--~Ys~iysLs~~--~VqeIkIS-d--G~~Lai~q~t~~~ipiKIl~I~tG~--~L~t~ 273 (411)
++|+.|+.++.|++++|||+. +.+.+.++..+ .|..+..+ + |.+|++..... -|+||++.+|+ .+..
T Consensus 19 ~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg---~I~vwd~~~~~~~~~~~- 94 (753)
T 3jro_A 19 YYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG---KVLIWKEENGRWSQIAV- 94 (753)
T ss_dssp SSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS---CEEEEEEETTEEEEEEE-
T ss_pred CCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC---eEEEEECCCCccccccc-
Confidence 468889999999999999999 67788888865 89999998 5 88888876543 48999999998 4444
Q ss_pred eeccccCCcceeeeeecc----eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec----------------e
Q 015220 274 NHLLHRNKKVDFIEQFNE----KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----------------Q 333 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~e----kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----------------q 333 (411)
+.+|..+|..+..+++ .++....+..+++||+.++..... .+...|+..+..+..+ +
T Consensus 95 --~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~-~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~ 171 (753)
T 3jro_A 95 --HAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR 171 (753)
T ss_dssp --ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC-EEEECCSSCEEEEEECCCC---------CGGGC
T ss_pred --ccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce-eEeecCCCceEEEEecCcccccccccccCCCCC
Confidence 6689999999999976 456677889999999999843321 1455688888888753 5
Q ss_pred eEEEE-ecCeEEEEecC-C----ceeeeeccccccCCCCccceEEEcCC---CCEEEEEecCCCCCccccCCceEEEeee
Q 015220 334 LFLTF-RNRTVAVWNFR-G----ELVTSFEDHLLWHPDCNTNNIYITSD---QDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 334 lFlSf-sd~tI~iWn~~-G----el~~s~e~H~~~~~~c~~n~i~Is~D---qd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
.++++ .|++|++||++ + .++.++.+|.. .+..+..+|| |.+++|++.|. +|.+||+
T Consensus 172 ~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~-----~V~~l~~sp~~~~~~~l~s~s~Dg----------~I~iwd~ 236 (753)
T 3jro_A 172 KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD-----WVRDVAWSPTVLLRSYLASVSQDR----------TCIIWTQ 236 (753)
T ss_dssp CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS-----CEEEEEECCCCSSSEEEEEEESSS----------CEEEEEE
T ss_pred EEEEEECCCeEEEEeccCCcccceeeeeecCCCC-----cEEEEEeccCCCCCCEEEEEecCC----------EEEEecC
Confidence 67777 89999999998 5 57779999988 8999999999 99999999987 9999999
Q ss_pred ccee
Q 015220 405 MFVT 408 (411)
Q Consensus 405 ~tGk 408 (411)
.+|+
T Consensus 237 ~~~~ 240 (753)
T 3jro_A 237 DNEQ 240 (753)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 9974
No 114
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.67 E-value=3.5e-16 Score=158.21 Aligned_cols=186 Identities=7% Similarity=0.015 Sum_probs=139.1
Q ss_pred EEeeC-----CCCeEEEeecCCCeEEEEEeeCce-----------EEEEecc--CceeEEEEeCCEEEEEEecCCCceee
Q 015220 198 VEFDD-----VNGKVLTYSAQDSIYKVFDLKNYT-----------MLYSISD--KNVQEIKISPGIMLLIFTKASGHVPL 259 (411)
Q Consensus 198 vEFDd-----~NGkiLt~~~~ds~ykVWdL~~Ys-----------~iysLs~--~~VqeIkISdG~~Lai~q~t~~~ipi 259 (411)
+.|.. ++|..|++.+.|+++||||+.+.+ ++.++.. ..|..+..+++..|++.... --|
T Consensus 213 v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~D---gtV 289 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKN---GFV 289 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETT---SEE
T ss_pred EEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCC---CEE
Confidence 56654 357899999999999999998753 2235554 37999999855566666543 368
Q ss_pred EEEEecCCcE-EeEeeeccccCCcceeee--eecce-eE--EeecCceeeEEEcccceEEEeeccccCCCc--eEEEEee
Q 015220 260 KILSIEDGTV-LKSFNHLLHRNKKVDFIE--QFNEK-LL--VKQENENLQILDVRNFELTEVSRTEFMTPS--AFIFLYE 331 (411)
Q Consensus 260 KIl~I~tG~~-L~t~~~LL~h~K~I~FLE--~~~ek-ll--IKQe~~~LkI~dL~t~e~~~v~~T~f~hps--AfifLy~ 331 (411)
+||++++|+. +.+ +-+|..+|..+. -.+++ .+ -.+.+..++|||+++++... +.-+|.. .+..++.
T Consensus 290 ~lWD~~~~~~~~~~---~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~---~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 290 AEFDLTDPEVPSFY---DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK---TTVSRFRGSNLVPVVY 363 (524)
T ss_dssp EEEETTBCSSCSEE---EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC---EEEEECSCCSCCCEEE
T ss_pred EEEECCCCCCceEE---eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc---ccccccccCcccceEe
Confidence 9999999853 344 458999999994 34443 33 34578999999999987543 2222221 2223333
Q ss_pred ---ceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 332 ---NQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 332 ---sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
.+.|++. .|++|++||++ |..+.+|.+|.. .++.|+.||||.+|+|||.|. +|+|||+..
T Consensus 364 sp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~-----~V~sva~Sp~g~~l~Sgs~Dg----------tv~lwd~~~ 428 (524)
T 2j04_B 364 CPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET-----TITAIGVSRLHPMVLAGSADG----------SLIITNAAR 428 (524)
T ss_dssp ETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS-----CEEEEECCSSCCBCEEEETTT----------EEECCBSCS
T ss_pred CCCcCeEEEeCCCCcEEEEECcccccceeeecCCC-----ceEEEEeCCCCCeEEEEECCC----------EEEEEechH
Confidence 3678887 88899999999 888899999999 899999999999999999997 999999764
Q ss_pred e
Q 015220 407 V 407 (411)
Q Consensus 407 G 407 (411)
+
T Consensus 429 ~ 429 (524)
T 2j04_B 429 R 429 (524)
T ss_dssp S
T ss_pred h
Confidence 3
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.66 E-value=1.7e-15 Score=143.13 Aligned_cols=194 Identities=15% Similarity=0.086 Sum_probs=127.4
Q ss_pred CeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEE-----EeccC--ceeEEEEe---------CCEEEEEEecCCCceee
Q 015220 196 GFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY-----SISDK--NVQEIKIS---------PGIMLLIFTKASGHVPL 259 (411)
Q Consensus 196 gfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iy-----sLs~~--~VqeIkIS---------dG~~Lai~q~t~~~ipi 259 (411)
....+..++++.|++.+.|+++|+||+++.++.. .+++| .|..+..| ||++||....-+ -+
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~---tv 168 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC---TL 168 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS---EE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC---eE
Confidence 3455667889999999999999999999987543 34544 89999998 589998876543 58
Q ss_pred EEEEecCCcEEeEeeeccccCCcceeeeeecce---eEEeecCceeeEEEcccceEEEee-cc-----------------
Q 015220 260 KILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK---LLVKQENENLQILDVRNFELTEVS-RT----------------- 318 (411)
Q Consensus 260 KIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek---llIKQe~~~LkI~dL~t~e~~~v~-~T----------------- 318 (411)
+|||+.+++.+.. +++|..++..++-+++. ++....+..+++||+.+++...-. ..
T Consensus 169 ~~Wd~~~~~~~~~---~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 169 IIWRLTDEGPILA---GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp EEEEEETTEEEEE---EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred EEEECCCCceeee---ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 9999999998887 77899999999999754 345568899999999998764310 00
Q ss_pred ----ccCCCceEEEEeec----eeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcC-------------
Q 015220 319 ----EFMTPSAFIFLYEN----QLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS------------- 375 (411)
Q Consensus 319 ----~f~hpsAfifLy~s----qlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~------------- 375 (411)
.-+|...+..+... +.+++. .|+++++||+. |.....+.+|.. .++.+.+++
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTM-----KLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSC
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecC-----ccccEEEccccccccccCccee
Confidence 11233333333322 567777 89999999999 888888888876 333333333
Q ss_pred -------CCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 376 -------DQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 376 -------Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|+.+++||+.|. +|+|||+.+|+++
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg----------~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHG----------LIQLINTYEKDSN 352 (393)
T ss_dssp CEECSSCTTEEEEEETTTT----------EEEEEETTCTTCC
T ss_pred EEEccCCCCEEEEEECCCC----------EEEEEECCCCcEE
Confidence 455778888876 9999999999864
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.66 E-value=7.5e-15 Score=138.51 Aligned_cols=180 Identities=14% Similarity=0.125 Sum_probs=146.2
Q ss_pred EEEeecCCCeEEEEEeeCceEEEEec--cC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCC
Q 015220 207 VLTYSAQDSIYKVFDLKNYTMLYSIS--DK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK 281 (411)
Q Consensus 207 iLt~~~~ds~ykVWdL~~Ys~iysLs--~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K 281 (411)
+|+.+ -|++++|||+.+.+.+..+. ++ .|..++.| ||.+||+..... -|+||++++|+.+.+ +-+|..
T Consensus 118 ~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg---~v~iWd~~~~~~~~~---~~~h~~ 190 (420)
T 4gga_A 118 VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA---EVQLWDVQQQKRLRN---MTSHSA 190 (420)
T ss_dssp EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS---CEEEEETTTTEEEEE---ECCCSS
T ss_pred EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC---eEEEEEcCCCcEEEE---EeCCCC
Confidence 55544 48999999999999776554 33 59999999 899999876543 489999999999999 668999
Q ss_pred cceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cc----e
Q 015220 282 KVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GE----L 352 (411)
Q Consensus 282 ~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Ge----l 352 (411)
.+..+...+..+...+.+..+++||+.+..... .++-+|...+..+..+ +.++++ .|+++.+|+.. |+ .
T Consensus 191 ~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~--~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~ 268 (420)
T 4gga_A 191 RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV--ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP 268 (420)
T ss_dssp CEEEEEEETTEEEEEETTSEEEEEETTSSSCEE--EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCC
T ss_pred ceEEEeeCCCEEEEEeCCCceeEeeecccceee--EEecccccceeeeeecCCCCeeeeeeccccceEEeecccccccee
Confidence 999999888888888999999999999865543 2667788888888766 667777 88999999998 65 4
Q ss_pred eeeeccccccCCCCccceEEEcCCCC-EEEE--EecCCCCCccccCCceEEEeeecceeee
Q 015220 353 VTSFEDHLLWHPDCNTNNIYITSDQD-LIIS--YCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 353 ~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS--~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+..+.+|.. .+..+..+|++. ++++ |+.|. +|++||+.||+++
T Consensus 269 ~~~~~~~~~-----~V~~~~~~p~~~~~la~~~gs~D~----------~I~iwd~~t~~~~ 314 (420)
T 4gga_A 269 LQTFTQHQG-----AVKAVAWCPWQSNVLATGGGTSDR----------HIRIWNVCSGACL 314 (420)
T ss_dssp SEEECCCSS-----CEEEEEECTTCTTEEEEEECTTTC----------EEEEEETTTTEEE
T ss_pred eeeecccCC-----ceeeeeeCCCcccEEEEEeecCCC----------EEEEEeCCccccc
Confidence 567888887 789999999765 5444 34555 9999999999985
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.66 E-value=3.5e-15 Score=141.99 Aligned_cols=195 Identities=18% Similarity=0.135 Sum_probs=153.0
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeC----------ceEEEEeccC--ceeEEEEe-CCE-EEEEEecCCCceee
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----------YTMLYSISDK--NVQEIKIS-PGI-MLLIFTKASGHVPL 259 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~----------Ys~iysLs~~--~VqeIkIS-dG~-~Lai~q~t~~~ipi 259 (411)
.+-.+.|...++.+|+....++.++|||+.+ .+++.++..+ .|..+..+ +|. +|++.... -.|
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g~i 206 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD---HTI 206 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT---SCE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC---CeE
Confidence 3457889888899999999999999999998 6778887755 88999999 454 66665443 348
Q ss_pred EEEEecCCcE----EeEeeeccccCCcceeeeeec-ceeE--EeecCceeeEEEcccceEEEeeccccCCCceEEEEeec
Q 015220 260 KILSIEDGTV----LKSFNHLLHRNKKVDFIEQFN-EKLL--VKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN 332 (411)
Q Consensus 260 KIl~I~tG~~----L~t~~~LL~h~K~I~FLE~~~-ekll--IKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s 332 (411)
+||++.+++. +.....+.+|..+|..+..++ +..+ ....+..|+|||+++++......+...|...+.++..+
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 9999998543 222333568999999999987 3333 44578999999999874211111445788888888876
Q ss_pred ----eeEEEE-ecCeEEEEecC--CceeeeeccccccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEEEeee
Q 015220 333 ----QLFLTF-RNRTVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 333 ----qlFlSf-sd~tI~iWn~~--Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
.+|+++ .|++|++||++ +.++.++.+|.. .+..+..+||++ +++|++.|. +|.|||+
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~-----~v~~i~~sp~~~~~l~s~~~d~----------~i~iwd~ 351 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKD-----EIFQVQWSPHNETILASSGTDR----------RLHVWDL 351 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSS-----CEEEEEECSSCTTEEEEEETTS----------CCEEEEG
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCC-----CEEEEEECCCCCCEEEEEeCCC----------cEEEEeC
Confidence 378888 78999999999 568999999988 899999999995 799999887 9999999
Q ss_pred cc
Q 015220 405 MF 406 (411)
Q Consensus 405 ~t 406 (411)
.+
T Consensus 352 ~~ 353 (430)
T 2xyi_A 352 SK 353 (430)
T ss_dssp GG
T ss_pred CC
Confidence 87
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.65 E-value=5.1e-15 Score=157.83 Aligned_cols=191 Identities=12% Similarity=0.093 Sum_probs=147.2
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceE----EEEec-------c--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTM----LYSIS-------D--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~----iysLs-------~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
++|+.|++...|+++|+||+.+.+. ++++. + ..|..|.+| ||.+||+..... -|+||++.+++
T Consensus 445 pdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dg---tV~lwd~~~~~ 521 (902)
T 2oaj_A 445 EYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETG---DVVLFKYEVNQ 521 (902)
T ss_dssp SEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTS---CEEEEEEEECC
T ss_pred ccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCc---EEEEEEecCcc
Confidence 5799999999999999999988642 23321 2 379999999 999999987654 58999999984
Q ss_pred EE------------------------------------------eEeeeccccCCcceeeeeecceeEEee--cCceeeE
Q 015220 269 VL------------------------------------------KSFNHLLHRNKKVDFIEQFNEKLLVKQ--ENENLQI 304 (411)
Q Consensus 269 ~L------------------------------------------~t~~~LL~h~K~I~FLE~~~ekllIKQ--e~~~LkI 304 (411)
.. .....+-+|+.+|..|+.++++ +|+. ++..|+|
T Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~l 600 (902)
T 2oaj_A 522 FYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLML 600 (902)
T ss_dssp C---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEE
T ss_pred ccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEE
Confidence 21 0122256799999999999999 6665 6778999
Q ss_pred EEcccceEEEe-e-cccc-CCCceEEEEeec-----------eeEEEE-ecCeEEEEec---C-Cceeeeecccccc-CC
Q 015220 305 LDVRNFELTEV-S-RTEF-MTPSAFIFLYEN-----------QLFLTF-RNRTVAVWNF---R-GELVTSFEDHLLW-HP 364 (411)
Q Consensus 305 ~dL~t~e~~~v-~-~T~f-~hpsAfifLy~s-----------qlFlSf-sd~tI~iWn~---~-Gel~~s~e~H~~~-~~ 364 (411)
||+.+++...- . ++.. +|+.++..|+.+ +.++++ .|++|++||+ . |+.+++|.+|.-- +.
T Consensus 601 wd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~ 680 (902)
T 2oaj_A 601 IDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSK 680 (902)
T ss_dssp EETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSS
T ss_pred EECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCC
Confidence 99988877531 1 3443 899999999988 778888 8899999998 4 9999999999732 22
Q ss_pred CCccceEE-Ec----------------------CCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 365 DCNTNNIY-IT----------------------SDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 365 ~c~~n~i~-Is----------------------~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+... .|. ++ +||.+|+|+ ++ +|+||++.||||+
T Consensus 681 ~~v~-~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~----------~ir~~~~~~~k~~ 736 (902)
T 2oaj_A 681 GPIH-KIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FD----------DIRLITLGKSKST 736 (902)
T ss_dssp CCCC-EEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SS----------EEEEECTTCCCEE
T ss_pred CceE-EEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--cc----------ceEEEeCccccce
Confidence 2222 333 44 788888887 66 8999999999986
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.65 E-value=2.5e-14 Score=132.41 Aligned_cols=196 Identities=13% Similarity=0.143 Sum_probs=148.3
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
+.| .++|+.++....++.+++||+++.+.+.++.. ..+..+.++ +|..+++.....+ .|++|++.+|+.+..+.
T Consensus 175 ~~~-~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 175 ISI-PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISE--DISVIDRKTKLEIRKTD 251 (433)
T ss_dssp EEE-GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTT--EEEEEETTTTEEEEECC
T ss_pred EEE-cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCC--cEEEEECCCCcEEEEec
Confidence 566 56899999999999999999999999988874 389999999 6766665554333 58999999999988743
Q ss_pred eccccCCcceeeeeecce--eEEee--------cCceeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEE-e
Q 015220 275 HLLHRNKKVDFIEQFNEK--LLVKQ--------ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTF-R 339 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ek--llIKQ--------e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSf-s 339 (411)
....+..+..++++ +++.. ++..|++||+.+++..... .|+.....++.+ .+|++. .
T Consensus 252 ----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 252 ----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI----GPPGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp ----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE----EEEECEEEEEECSSTTEEEEEETT
T ss_pred ----CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec----cCCCCcceEEECCCCCEEEEEecC
Confidence 34568889998776 34444 3679999999999887632 233444444433 578886 8
Q ss_pred cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCC-----ccccCCceEEEeeecceeee
Q 015220 340 NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDD-----PLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~-----~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++|.+||++ |+++..+. |.. ....+.++|||+.|++++.+.... -.....|+|.+||+.+|+++
T Consensus 324 ~~~v~v~d~~~~~~~~~~~-~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 324 CSKIEVYDLKEKKVQKSIP-VFD-----KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSS-----SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCcEEEEec-CCC-----CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 9999999999 88888775 433 678999999999999988764110 01122489999999999875
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.64 E-value=4.6e-14 Score=123.77 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=141.7
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEec--cC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
|+ +|+. +.|++++|||+.+.+++..++ ++ .|..++.+ +|.+|++..... -|+||++++|+.+.+ +-+
T Consensus 36 ~~-~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg---~v~iw~~~~~~~~~~---~~~ 107 (318)
T 4ggc_A 36 GN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA---EVQLWDVQQQKRLRN---MTS 107 (318)
T ss_dssp TS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS---EEEEEETTTTEEEEE---EEC
T ss_pred CC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC---cEEEeecCCceeEEE---ecC
Confidence 44 5554 459999999999999887775 22 69999999 888888876443 589999999999999 568
Q ss_pred cCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Ccee
Q 015220 279 RNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELV 353 (411)
Q Consensus 279 h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~ 353 (411)
|...+..+...+..+.....+..+++|+..++..... +..+|......+... +.++|. .|++|++||++ |+..
T Consensus 108 h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 108 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVA--TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEE--EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEE--EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 9999999998888888889999999999998755432 666788888777755 677787 88999999998 6643
Q ss_pred ----eeeccccccCCCCccceEEEcCCCCEEE-EEecCCCCCccccCCceEEEeeecceeee
Q 015220 354 ----TSFEDHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 354 ----~s~e~H~~~~~~c~~n~i~Is~Dqd~ii-S~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.....|.. .+..+..++++..++ .++.+ ..|+|++||+.++++.
T Consensus 186 ~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~--------~~~~i~lwd~~~~~~~ 234 (318)
T 4ggc_A 186 WVPLQTFTQHQG-----AVKAVAWCPWQSNVLATGGGT--------SDRHIRIWNVCSGACL 234 (318)
T ss_dssp SCCSEEECCCCS-----CEEEEEECTTSTTEEEEEECT--------TTCEEEEEETTTCCEE
T ss_pred ccceeeecccCC-----ceEEEEecCCCCcEEEEEecC--------CCCEEEEEeccccccc
Confidence 34455555 677788888766444 32222 2359999999988753
No 121
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=1.7e-13 Score=120.73 Aligned_cols=262 Identities=11% Similarity=0.072 Sum_probs=169.4
Q ss_pred ceehhhhccccceeeecccccEEEEEeCCCCc-eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADE-VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e-vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
+++++-...|.-.++|..+++.+..+...... -++++-++...+.+++++ +++ ..+ +..+ +..|+.-
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~---~~~-~~v--~~~d---~~~~~~~--- 69 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATV---NKS-ESL--VKID---LVTGETL--- 69 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEE---TTT-TEE--EEEE---TTTCCEE---
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEe---CCC-CeE--EEEE---CCCCCeE---
Confidence 45666667888899999999988887754322 256677777666655432 111 122 2222 2222210
Q ss_pred cceeecc----cCCCCeEEeeCCCCeEEEeec------------CCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEE
Q 015220 185 ALFESES----LKWPGFVEFDDVNGKVLTYSA------------QDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIM 246 (411)
Q Consensus 185 ~LF~~~~----l~~PgfvEFDd~NGkiLt~~~------------~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~ 246 (411)
..+.... -..|.-+.|+. +|+.|.... .++.+.|||+.+.+.+..+. +..+..+.+| ||..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 70 GRIDLSTPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp EEEECCBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSC
T ss_pred eeEEcCCcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCE
Confidence 0011110 12577888874 565444443 57999999999999888776 4478889999 8877
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeecccc-CCcceeeeeecce--eEEeecCc-----------------------
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR-NKKVDFIEQFNEK--LLVKQENE----------------------- 300 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h-~K~I~FLE~~~ek--llIKQe~~----------------------- 300 (411)
|++.. -.|.+|++.+|+++..+.. ++ ..++. .++++ +++..+..
T Consensus 149 l~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~---~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (337)
T 1pby_B 149 LYGLG-----RDLHVMDPEAGTLVEDKPI--QSWEAETY---AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYR 218 (337)
T ss_dssp EEEES-----SSEEEEETTTTEEEEEECS--TTTTTTTB---CCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEE
T ss_pred EEEeC-----CeEEEEECCCCcEeeeeec--cccCCCce---eCCCccEEeeeccCCCceeeeeeccccccccccccccc
Confidence 77762 2489999999999887542 22 23442 23433 33322221
Q ss_pred -eeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEc
Q 015220 301 -NLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT 374 (411)
Q Consensus 301 -~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is 374 (411)
.|.+||+.+++...+. ...++.....++.+ .+|++ +++|.+||+. |+++.++..+. ....+.++
T Consensus 219 ~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~s 288 (337)
T 1pby_B 219 TGLLTMDLETGEMAMRE--VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPH------SYYSVNVS 288 (337)
T ss_dssp EEEEEEETTTCCEEEEE--EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSS------CCCEEEEC
T ss_pred cceEEEeCCCCCceEee--cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCC------ceeeEEEC
Confidence 5799999999876432 22233444444444 34444 8999999999 88888876542 35689999
Q ss_pred CCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 375 SDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 375 ~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
|||+.|++++.+. +|.+||+.||+.+
T Consensus 289 ~dg~~l~~~~~~~----------~i~v~d~~~~~~~ 314 (337)
T 1pby_B 289 TDGSTVWLGGALG----------DLAAYDAETLEKK 314 (337)
T ss_dssp TTSCEEEEESBSS----------EEEEEETTTCCEE
T ss_pred CCCCEEEEEcCCC----------cEEEEECcCCcEE
Confidence 9999888876654 9999999999864
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1e-13 Score=143.23 Aligned_cols=241 Identities=11% Similarity=0.084 Sum_probs=171.3
Q ss_pred CCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCC---eEEee-CCCCeEEE
Q 015220 134 TADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPG---FVEFD-DVNGKVLT 209 (411)
Q Consensus 134 s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~Pg---fvEFD-d~NGkiLt 209 (411)
++..-|.++-++..++.|++.| .|. .++.-.+. .+ .+.++ ...-.|.+ .+.|. +.+|..|+
T Consensus 7 gH~~~V~~l~~s~dg~~latg~---~dg--~I~vwd~~-----~~---~~~~~--~~l~~h~~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCS---SDK--TIKIFEVE-----GE---THKLI--DTLTGHEGPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEE---TTT--EEEEEEEE-----TT---EEEEE--EEECCCSSCEEEEEECCTTSCSEEE
T ss_pred cCcceeEEEEECCCCCeEEEEE---CCC--cEEEEecC-----CC---CCccc--eeccCCcCceEEEEecCCCCCCEEE
Confidence 4556788888888776665533 222 23322221 00 00000 01112333 34664 34589999
Q ss_pred eecCCCeEEEEEeeCce--EEEEeccC--ceeEEEEeC---CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCc
Q 015220 210 YSAQDSIYKVFDLKNYT--MLYSISDK--NVQEIKISP---GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK 282 (411)
Q Consensus 210 ~~~~ds~ykVWdL~~Ys--~iysLs~~--~VqeIkISd---G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~ 282 (411)
+++.|++++|||+.+.+ .+..+..+ .|..+.+++ |.++++..... .|+||++.++....... +.+|..+
T Consensus 72 s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg---~I~vwdl~~~~~~~~~~-~~~~~~~ 147 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG---KVSVVEFKENGTTSPII-IDAHAIG 147 (753)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS---EEEEEECCSSSCCCCEE-EECCSSC
T ss_pred EEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC---cEEEEEeecCCCcceeE-eecCCCc
Confidence 99999999999999987 77777644 899999994 77887776443 69999999996554433 4688899
Q ss_pred ceeeeeec---------------ceeEEeecCceeeEEEcccceE-EEeeccccCCCceEEEEeec------eeEEEE-e
Q 015220 283 VDFIEQFN---------------EKLLVKQENENLQILDVRNFEL-TEVSRTEFMTPSAFIFLYEN------QLFLTF-R 339 (411)
Q Consensus 283 I~FLE~~~---------------ekllIKQe~~~LkI~dL~t~e~-~~v~~T~f~hpsAfifLy~s------qlFlSf-s 339 (411)
|..+..++ ..++...++..|++||+.++.. ..+..+..+|+..+.+++.+ +.++|+ .
T Consensus 148 v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 148 VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 99999987 3456677899999999998742 23344777899999998865 567777 7
Q ss_pred cCeEEEEecC-Cc-----eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 NRTVAVWNFR-GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 d~tI~iWn~~-Ge-----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
|++|++||++ |+ .+....+|.. .+..+..+|||+.+++|+.|. +|.|||+.++.
T Consensus 228 Dg~I~iwd~~~~~~~~~~~~~~~~~~~~-----~v~~l~~spdg~~l~s~s~Dg----------~I~vwd~~~~~ 287 (753)
T 3jro_A 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPD-----VLWRASWSLSGNVLALSGGDN----------KVTLWKENLEG 287 (753)
T ss_dssp SSCEEEEEESSSSSCCBCCBSSSSCCSS-----CCCCEEECTTTCCEEEECSSS----------CEECCBCCSSS
T ss_pred CCEEEEecCCCCCCcceeEEeccCCCCC-----ceEEEEEcCCCCEEEEEcCCC----------EEEEEecCCCC
Confidence 9999999999 54 3334444555 788999999999999999886 99999998643
No 123
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.62 E-value=1e-12 Score=117.31 Aligned_cols=275 Identities=14% Similarity=0.128 Sum_probs=180.6
Q ss_pred eehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc
Q 015220 107 IVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFAL 186 (411)
Q Consensus 107 ii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L 186 (411)
++++-...|.-.+||..|++.+-.+....... ++-++...+.+++++. .++ +.+.. ++..|++ +.
T Consensus 12 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~--~~~----~i~~~---d~~~~~~----~~ 76 (331)
T 3u4y_A 12 GIVVEQHLRRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSD--FCQ----TLVQI---ETQLEPP----KV 76 (331)
T ss_dssp EEEEEGGGTEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEES--TTC----EEEEE---ECSSSSC----EE
T ss_pred EEEEecCCCeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeC--CCC----eEEEE---ECCCCce----eE
Confidence 34455567888999999999888877554444 8888887776666432 122 22233 2222221 12
Q ss_pred eeecccCCCCe-EEeeCCCCeEEEeecCC-C--eEEEEEeeCceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeE
Q 015220 187 FESESLKWPGF-VEFDDVNGKVLTYSAQD-S--IYKVFDLKNYTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLK 260 (411)
Q Consensus 187 F~~~~l~~Pgf-vEFDd~NGkiLt~~~~d-s--~ykVWdL~~Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiK 260 (411)
-....-..|-. +.|+. +|+.|.....+ + .+.|||+.+.+.+..+.. .....+.+| ||..|++.....+. .+.
T Consensus 77 ~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~i~ 154 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSAN-TVR 154 (331)
T ss_dssp EEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTT-EEE
T ss_pred EecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCc-eEE
Confidence 22333456888 88875 55554444333 4 999999999999988875 478999999 78666665544332 277
Q ss_pred EEEecCCcEEeEe-eeccccCCcceeeeeecce--eEEee-cCceeeEEEcccceE---EE-eeccccCCCceEEEEeec
Q 015220 261 ILSIEDGTVLKSF-NHLLHRNKKVDFIEQFNEK--LLVKQ-ENENLQILDVRNFEL---TE-VSRTEFMTPSAFIFLYEN 332 (411)
Q Consensus 261 Il~I~tG~~L~t~-~~LL~h~K~I~FLE~~~ek--llIKQ-e~~~LkI~dL~t~e~---~~-v~~T~f~hpsAfifLy~s 332 (411)
+|++.++..+... ...+.....+.-+..++++ +++.. .+..|.+||+.+++. .. ++ ....|..+.|-...
T Consensus 155 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg 232 (331)
T 3u4y_A 155 RFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDG 232 (331)
T ss_dssp EEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTS
T ss_pred EEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCC
Confidence 8888765444322 2234455667889999887 45554 578999999999886 43 32 22355554443333
Q ss_pred e-eEEEE-ecCeEEEEecC-Cce--eeeeccccccCCC--CccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 333 Q-LFLTF-RNRTVAVWNFR-GEL--VTSFEDHLLWHPD--CNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 333 q-lFlSf-sd~tI~iWn~~-Gel--~~s~e~H~~~~~~--c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
+ +|++- .+++|.+||+. |++ +.++..+...++. ...+.+.+||||+.|+..+.+. |+|.+||+.
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~---------~~v~v~d~~ 303 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANIS---------RELKVFTIS 303 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTT---------TEEEEEETT
T ss_pred CEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCC---------CcEEEEEec
Confidence 4 66666 57899999999 887 6677766443332 2347799999999887766653 699999998
Q ss_pred ceee
Q 015220 406 FVTC 409 (411)
Q Consensus 406 tGk~ 409 (411)
+..+
T Consensus 304 ~~~~ 307 (331)
T 3u4y_A 304 GKVV 307 (331)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 7654
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.59 E-value=7.2e-14 Score=139.02 Aligned_cols=183 Identities=13% Similarity=0.065 Sum_probs=122.2
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCc---eEEEEeccCc--e-------------------------eEEEEe-
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY---TMLYSISDKN--V-------------------------QEIKIS- 242 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Y---s~iysLs~~~--V-------------------------qeIkIS- 242 (411)
.||+-|-| |++ +.+.+++.|+..+. +++|+.+.++ | ..+.+|
T Consensus 49 ~~~~~~~~-----~~~--~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp 121 (356)
T 2w18_A 49 RAGCKEPC-----IIT--ACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS 121 (356)
T ss_dssp ----CEEE-----EEE--EESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--
T ss_pred cCCCCccE-----EEE--eccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC
Confidence 35665555 555 67899999999998 8999998554 3 344444
Q ss_pred C----CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe----------------------
Q 015220 243 P----GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK---------------------- 296 (411)
Q Consensus 243 d----G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK---------------------- 296 (411)
| |+.++..... ++||+|.+|+++.+. .-+|.+.|+.+.+.+++.+++
T Consensus 122 d~~~~~~~l~s~g~~-----~~v~~l~~g~lv~ss--~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 122 DDESEKQVLLKSGNI-----KAVLGLTKRRLVSSS--GTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp ----CCEEEEEEEEE-----EEEEEETTTEEEEEE--SSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT
T ss_pred CccccccEEEeCCCe-----EEEEecCCCcEEEec--ccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc
Confidence 5 7777775422 667777777777761 235667777777766554322
Q ss_pred -----ecCceeeEEEcccceEEEeeccccCCC---ceEEEEeec---eeE------------EEE-ecCeEEEEecC-Cc
Q 015220 297 -----QENENLQILDVRNFELTEVSRTEFMTP---SAFIFLYEN---QLF------------LTF-RNRTVAVWNFR-GE 351 (411)
Q Consensus 297 -----Qe~~~LkI~dL~t~e~~~v~~T~f~hp---sAfifLy~s---qlF------------lSf-sd~tI~iWn~~-Ge 351 (411)
+.+..|||||+.+|+... |+-+|. ..+..++.+ +++ +|+ .|++|++||+. |.
T Consensus 195 ~LaSgS~D~TIkIWDl~TGk~l~---tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 195 ALLGTTIMNNIVIWNLKTGQLLK---KMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEEEETTSEEEEEETTTCCEEE---EEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred eEEEecCCCcEEEEECCCCcEEE---EEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 579999999999999888 554433 233323333 343 556 67899999999 88
Q ss_pred eeeee-----ccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 352 LVTSF-----EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 352 l~~s~-----e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+..+ ++|... .+-.+.+|.+++||+.|. ||+|||+.||||+
T Consensus 272 ~l~v~~~~~p~Gh~~~-------~lsg~~sg~~lASgS~Dg----------TIkIWDl~tGk~l 318 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGR-------FLEGDVKDHCAAAILTSG----------TIAIWDLLLGQCT 318 (356)
T ss_dssp EEEEEEECCCTTCCCC-------EEEEEEETTEEEEEETTS----------CEEEEETTTCSEE
T ss_pred EEEEEEeeccCCCcce-------eEccccCCCEEEEEcCCC----------cEEEEECCCCcEE
Confidence 77766 477551 222344478999999997 9999999999986
No 125
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.58 E-value=7.1e-12 Score=110.65 Aligned_cols=277 Identities=9% Similarity=0.014 Sum_probs=168.7
Q ss_pred ceehhh-hccccceeeecc-cccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC
Q 015220 106 DIVFAL-AQSGVCAAFCRE-TNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG 183 (411)
Q Consensus 106 dii~~L-~~sG~c~af~~~-t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~ 183 (411)
.++++- ...|...+|+.. +++....--....+-+.++-++...+.|++++. ++ ..++...+..+ .|++
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~-~~v~~~~~~~~---~~~~--- 74 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR---PE-FRVLAYRIAPD---DGAL--- 74 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET---TT-TEEEEEEECTT---TCCE---
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec---CC-CeEEEEEecCC---CCce---
Confidence 334443 456777888763 454332222223445667777776666655331 21 23433333210 1111
Q ss_pred CcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEe---eCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCcee
Q 015220 184 FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDL---KNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVP 258 (411)
Q Consensus 184 ~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL---~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ip 258 (411)
..+-.-..-..|..+.|+.-...+++.+..++.+.|||+ .+.+.+..+... .+..+.+| ||..|++.....+ .
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--~ 152 (343)
T 1ri6_A 75 TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQD--R 152 (343)
T ss_dssp EEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGT--E
T ss_pred eeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCC--E
Confidence 111111112378889998655556677777999999999 667777777644 78999999 7877777764444 3
Q ss_pred eEEEEecC-CcEEeEe--eeccccCCcceeeeeecce--eEEee-cCceeeEEEcc--cceEEE---ee--ccccCCCce
Q 015220 259 LKILSIED-GTVLKSF--NHLLHRNKKVDFIEQFNEK--LLVKQ-ENENLQILDVR--NFELTE---VS--RTEFMTPSA 325 (411)
Q Consensus 259 iKIl~I~t-G~~L~t~--~~LL~h~K~I~FLE~~~ek--llIKQ-e~~~LkI~dL~--t~e~~~---v~--~T~f~hpsA 325 (411)
|.+|++.+ |++.... ....+....+..+..++++ +++.. .+..+.+||+. +++... +. +..+.....
T Consensus 153 v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 153 ICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp EEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred EEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 89999998 8765433 3334445567778888876 44554 78899999994 454422 11 111111223
Q ss_pred EEEEeec----eeEEEE-ecCeEEEEecC--C---ceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccC
Q 015220 326 FIFLYEN----QLFLTF-RNRTVAVWNFR--G---ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEG 395 (411)
Q Consensus 326 fifLy~s----qlFlSf-sd~tI~iWn~~--G---el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~ 395 (411)
...++.+ .+|++. .+++|.+|+++ + ..+..+..+. ....++++|||+.|+.++.++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~-------- 298 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET------QPRGFNVDHSGKYLIAAGQKS-------- 298 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS------SCCCEEECTTSSEEEEECTTT--------
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC------ccceEEECCCCCEEEEecCCC--------
Confidence 3334433 566677 68999999998 2 2444554432 256799999999888887532
Q ss_pred CceEEEe--eecceee
Q 015220 396 NGKLFVS--LLMFVTC 409 (411)
Q Consensus 396 ~gtI~i~--~i~tGk~ 409 (411)
|+|.+| |..||++
T Consensus 299 -~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 299 -HHISVYEIVGEQGLL 313 (343)
T ss_dssp -CEEEEEEEETTTTEE
T ss_pred -CeEEEEEEcCCCcee
Confidence 499999 4457865
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.5e-14 Score=150.20 Aligned_cols=175 Identities=13% Similarity=0.084 Sum_probs=140.0
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccC------ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE------
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK------NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV------ 269 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~------~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~------ 269 (411)
|+|+.|+....|++.+|||.++ ++..+.++ .|..+..| ||.+||+....+. |+||++++|++
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGt---VkIWd~~~~~l~~~~~i 169 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGE---LQFFSIRKNSENTPEFY 169 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSE---EEEEECCCCTTTCCCCE
T ss_pred CCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCE---EEEEECCCCccccccce
Confidence 4999999999999999999766 77777733 39999999 9999999987554 89999999973
Q ss_pred -EeEee-eccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeecccc-CCCceEEEEee-ceeEEEEecCeEEE
Q 015220 270 -LKSFN-HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF-MTPSAFIFLYE-NQLFLTFRNRTVAV 345 (411)
Q Consensus 270 -L~t~~-~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f-~hpsAfifLy~-sqlFlSfsd~tI~i 345 (411)
++++. +.-+|...|.-+.-++++++..+.++.+++||+.+++...+..|+. +|...+..++. .+.+++.++++|++
T Consensus 170 ~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LASa~~~tIkL 249 (588)
T 2j04_A 170 FESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVLTCPGYVHK 249 (588)
T ss_dssp EEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEEECSSEEEE
T ss_pred eeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEEEeCCeEEE
Confidence 56643 3367889999999999997777899999999999988532222432 45555555554 47888888999999
Q ss_pred EecCCcee-eeeccccccCCCCccceEEE--cCCCCEEEEEecCC
Q 015220 346 WNFRGELV-TSFEDHLLWHPDCNTNNIYI--TSDQDLIISYCKAD 387 (411)
Q Consensus 346 Wn~~Gel~-~s~e~H~~~~~~c~~n~i~I--s~Dqd~iiS~~~d~ 387 (411)
|++.|... ....+|.. .+..|.+ |||+..|++++.|.
T Consensus 250 Wd~~~~~~~~~~~gh~~-----~V~~va~~~s~d~~~La~a~edG 289 (588)
T 2j04_A 250 IDLKNYSISSLKTGSLE-----NFHIIPLNHEKESTILLMSNKTS 289 (588)
T ss_dssp EETTTTEEEEEECSCCS-----CCCEEEETTCSSCEEEEECSSCE
T ss_pred EECCCCeEEEEEcCCCc-----eEEEEEeeeCCCCCEEEEEcCCC
Confidence 99995555 33338998 8999999 99999999998775
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.57 E-value=1.5e-13 Score=129.93 Aligned_cols=181 Identities=7% Similarity=-0.004 Sum_probs=121.3
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe-CC-EEEEEEecCCCceeeEEEEecCCcEEeEee----
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS-PG-IMLLIFTKASGHVPLKILSIEDGTVLKSFN---- 274 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~---- 274 (411)
.+|+.|++.+.|+++||||+++.+++..+.. ..|..+..+ ++ .+|+...... -|+|||+.+|+...+..
T Consensus 154 ~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~---~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 154 LAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG---NIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp EEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS---EEEEEETTCCC----------
T ss_pred CCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC---EEEEEECCCCcccccccccCC
Confidence 4899999999999999999999887766653 389999999 44 4666665433 58999999998766432
Q ss_pred ------------------eccccCCcceeeeee-cc--eeEEeecCceeeEEEcccceEEEeeccccCCCceEEE-----
Q 015220 275 ------------------HLLHRNKKVDFIEQF-NE--KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIF----- 328 (411)
Q Consensus 275 ------------------~LL~h~K~I~FLE~~-~e--kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfif----- 328 (411)
..-+|...+..+..+ ++ .++-...++.+++||+.+++... ++..|...+-.
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~---~l~~~~~~~~~~~~~~ 307 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN---EISDSTMKLGPKNLLP 307 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSC
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc---eEeeecCccccEEEcc
Confidence 124667777777765 33 34556688999999999876554 22111111111
Q ss_pred --------------Ee---eceeE-EEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCC
Q 015220 329 --------------LY---ENQLF-LTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 329 --------------Ly---~sqlF-lSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
++ ..++| +++ .|++|++||.. |+++..+.+|.. .+..++.||||..|++++.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~-----~V~svafspdG~~LA~as~~-- 380 (393)
T 4gq1_A 308 NVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM-----PIVDFCWHQDGSHLAIATEG-- 380 (393)
T ss_dssp SEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS-----CEEEEEECTTSSEEEEEESS--
T ss_pred ccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC-----cEEEEEEcCCCCEEEEEeCC--
Confidence 11 12334 456 68999999999 999999999887 79999999999999999866
Q ss_pred CCccccCCceEEEeeec
Q 015220 389 DDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 389 ~~~~~~~~gtI~i~~i~ 405 (411)
.+.+|.+.
T Consensus 381 ---------Gv~lvrL~ 388 (393)
T 4gq1_A 381 ---------SVLLTRLM 388 (393)
T ss_dssp ---------EEEEEEEG
T ss_pred ---------CeEEEEEe
Confidence 67777764
No 128
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.57 E-value=3.9e-13 Score=116.69 Aligned_cols=152 Identities=9% Similarity=0.062 Sum_probs=119.6
Q ss_pred CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc----EEeEeeeccccCCcceeeeeec----ceeEEeecCceeeE
Q 015220 234 KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT----VLKSFNHLLHRNKKVDFIEQFN----EKLLVKQENENLQI 304 (411)
Q Consensus 234 ~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~----~L~t~~~LL~h~K~I~FLE~~~----ekllIKQe~~~LkI 304 (411)
+.|..+.++ +|.+|++.... -.|+||++.+++ .+.+ +-+|..+|..++.++ ..++....+..|++
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSD---QHIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETT---SEEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cceeEEEEcCCCCEEEEeeCC---CeEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 389999999 88888887643 369999999985 4444 558999999999986 33455678899999
Q ss_pred EEcccc---------eEEEeeccccCCCceEEEEeec-----eeEEEE-ecCeEEEEecC-Cce----------------
Q 015220 305 LDVRNF---------ELTEVSRTEFMTPSAFIFLYEN-----QLFLTF-RNRTVAVWNFR-GEL---------------- 352 (411)
Q Consensus 305 ~dL~t~---------e~~~v~~T~f~hpsAfifLy~s-----qlFlSf-sd~tI~iWn~~-Gel---------------- 352 (411)
||+.++ +... +...|+..+..+..+ +++++. .|++|++||++ ++.
T Consensus 86 wd~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLC---TLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEECTTSCTTSSCSEEEEE---EECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EecCCCcccccccCcceee---eecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 999987 3344 666788888888754 457777 88999999987 543
Q ss_pred --------------------------------------------eeeeccccccCCCCccceEEEcCCC----CEEEEEe
Q 015220 353 --------------------------------------------VTSFEDHLLWHPDCNTNNIYITSDQ----DLIISYC 384 (411)
Q Consensus 353 --------------------------------------------~~s~e~H~~~~~~c~~n~i~Is~Dq----d~iiS~~ 384 (411)
+.++.+|.. .++.+..+||+ ++|++++
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKS-----LIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCS-----CEEEEEECCCSSCSSEEEEEEE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCc-----ceeEEEECCCCCCcceEEEEEc
Confidence 345556655 78999999999 8999999
Q ss_pred cCCCCCccccCCceEEEeeecceee
Q 015220 385 KADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 385 ~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.|. +|+|||+.++++
T Consensus 238 ~dg----------~i~iwd~~~~~~ 252 (351)
T 3f3f_A 238 KDG----------RIRIFKITEKLS 252 (351)
T ss_dssp TTS----------CEEEEEEEECC-
T ss_pred CCC----------eEEEEeCCCCcC
Confidence 987 999999998754
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.54 E-value=5.4e-13 Score=134.64 Aligned_cols=194 Identities=12% Similarity=0.099 Sum_probs=147.9
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCceeeEEEEe--cCCc
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSI--EDGT 268 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I--~tG~ 268 (411)
..|.|. || ++|+.++.+..++++.|||..+.+++.+|. ++.+..+++| ||.+|++.... --|.+|++ .|++
T Consensus 139 ~~~~~~-~~-p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~ 213 (543)
T 1nir_A 139 KKQLND-LD-LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPT 213 (543)
T ss_dssp SSCCSC-CC-GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCE
T ss_pred cccccc-cC-CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC---CeEEEEECcCCCCc
Confidence 356665 66 578999999999999999999999999998 6679999999 99999998865 55999999 9999
Q ss_pred EEeEeeeccccCCcceeeeeec----ce--eEEeec-CceeeEEEcccceEEEeecccc-------CCCc-eEEEEeec-
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFN----EK--LLVKQE-NENLQILDVRNFELTEVSRTEF-------MTPS-AFIFLYEN- 332 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~----ek--llIKQe-~~~LkI~dL~t~e~~~v~~T~f-------~hps-AfifLy~s- 332 (411)
++.++. +...+..++.++ ++ +++..+ ++.+.+||..+++....-.+.- +||+ .+..++.+
T Consensus 214 ~~~~i~----~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 214 KVAEIK----IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp EEEEEE----CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred EEEEEe----cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECC
Confidence 998844 345678899997 54 456653 7999999999999887433321 2455 34444433
Q ss_pred ---eeEEEE-ecCeEEEEecC-Cceee-eeccccccCCCCccceEEEcCCCCEEEEEe-cCCCCCccccCCceEEEeeec
Q 015220 333 ---QLFLTF-RNRTVAVWNFR-GELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYC-KADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 333 ---qlFlSf-sd~tI~iWn~~-Gel~~-s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~-~d~~~~~~~~~~gtI~i~~i~ 405 (411)
.++++. .+++|.+||.. ++.+. +..+|-. ....+++||||+.++..+ .++ +|.+||..
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~-----~~~~~~~spdg~~l~va~~~~~----------~v~v~D~~ 354 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP-----FLHDGGWDSSHRYFMTAANNSN----------KVAVIDSK 354 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCS-----SCCCEEECTTSCEEEEEEGGGT----------EEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcceeEEeccCc-----CccCceECCCCCEEEEEecCCC----------eEEEEECC
Confidence 677777 78899999998 55333 2223433 456799999999766554 455 99999999
Q ss_pred ceeee
Q 015220 406 FVTCK 410 (411)
Q Consensus 406 tGk~~ 410 (411)
||||+
T Consensus 355 tg~l~ 359 (543)
T 1nir_A 355 DRRLS 359 (543)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 99985
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=3.1e-11 Score=107.71 Aligned_cols=197 Identities=12% Similarity=0.058 Sum_probs=145.3
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc-----------eeEEEEe-CCEEEEEEecCCCceeeE
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-----------VQEIKIS-PGIMLLIFTKASGHVPLK 260 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-----------VqeIkIS-dG~~Lai~q~t~~~ipiK 260 (411)
..|.-+.|+.-..++++....++.+.+||+++.+.+..+.... +..+.+| ||..|++..... .--|.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEE
Confidence 4577888987666788888889999999999999988887542 7889999 777666665321 23478
Q ss_pred EEEecCCcEEeEeeeccccCCcceeeeeecc--eeEEeecCceeeEEEcccceEEEeecc-ccCCCceEEEEeec----e
Q 015220 261 ILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE--KLLVKQENENLQILDVRNFELTEVSRT-EFMTPSAFIFLYEN----Q 333 (411)
Q Consensus 261 Il~I~tG~~L~t~~~LL~h~K~I~FLE~~~e--kllIKQe~~~LkI~dL~t~e~~~v~~T-~f~hpsAfifLy~s----q 333 (411)
+|++.+|+.+..+. .+...+.-+..+++ .+++..++..|.+||+.+++....-.. ..+++..+..++.+ .
T Consensus 168 ~~d~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQ---NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEETTTTEEEEEEC---CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred EEcCCCCceEEEec---CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 89999999998844 23445677888765 478888899999999999998763222 11233333333332 5
Q ss_pred eEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEe-cCCCCCccccCCceEEEeeecceeee
Q 015220 334 LFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYC-KADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 334 lFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~-~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+|++- .+++|.+||+. |+++..+.-+.. ..+.++|||+.++..+ .+ |+|.+||+.||+++
T Consensus 245 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-------~~~~~s~dg~~l~v~~~~~----------~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTRNGNILAKVAAPES-------LAVLFNPARNEAYVTHRQA----------GKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSSC-------CCEEEETTTTEEEEEETTT----------TEEEEEETTTTEEE
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEEcCCC-------ceEEECCCCCEEEEEECCC----------CeEEEEECCCCeEE
Confidence 77777 45899999998 998888775332 4589999999555444 44 49999999999874
No 131
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.51 E-value=9.2e-11 Score=106.36 Aligned_cols=202 Identities=9% Similarity=0.110 Sum_probs=138.3
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEee---CceEEEEeccC-----------ceeEEEEe-CCEEEEEEecCCC
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYSISDK-----------NVQEIKIS-PGIMLLIFTKASG 255 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~---~Ys~iysLs~~-----------~VqeIkIS-dG~~Lai~q~t~~ 255 (411)
....|..+.|+.-...+++.+..+++++||++. ..+.+..+... .+..+.+| ||. |++.....+
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~ 162 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSD 162 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTT
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCC
Confidence 356799999986544566666688999999997 45566666432 47889999 888 555554444
Q ss_pred ceeeEEEEec-CCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEccc--ceEEEeeccccCCC------
Q 015220 256 HVPLKILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRN--FELTEVSRTEFMTP------ 323 (411)
Q Consensus 256 ~ipiKIl~I~-tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t--~e~~~v~~T~f~hp------ 323 (411)
.+.+|++. +|++.......++....+.-+..++++ +++. ..++.+.+||+.. ++...+.. ....|
T Consensus 163 --~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~-~~~~~~~~~~~ 239 (347)
T 3hfq_A 163 --KVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI-VKTIPADYTAH 239 (347)
T ss_dssp --EEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE-EESSCTTCCSC
T ss_pred --EEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee-eeecCCCCCCC
Confidence 57899999 787654433334444456668888886 4553 4678999999984 66544321 11122
Q ss_pred ceEEEEeec----eeEEEE-ecCeEEEEecC--C--ceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCcccc
Q 015220 324 SAFIFLYEN----QLFLTF-RNRTVAVWNFR--G--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (411)
Q Consensus 324 sAfifLy~s----qlFlSf-sd~tI~iWn~~--G--el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~ 394 (411)
.....++.+ .+|++. .+++|.+|+++ | .++.++..|-. ....+++||||+.|++++.+.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~------- 307 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-----FPRDFDLDPTEAFVVVVNQNT------- 307 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSS-----CCCEEEECTTSSEEEEEETTT-------
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCC-----CcCeEEECCCCCEEEEEEcCC-------
Confidence 234444444 467777 48999999997 5 34556666544 467899999999888877653
Q ss_pred CCceEEEe--eecceeee
Q 015220 395 GNGKLFVS--LLMFVTCK 410 (411)
Q Consensus 395 ~~gtI~i~--~i~tGk~~ 410 (411)
|+|.+| |..||++.
T Consensus 308 --~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 308 --DNATLYARDLTSGKLS 323 (347)
T ss_dssp --TEEEEEEECTTTCCEE
T ss_pred --CcEEEEEEeCCCCeEE
Confidence 489999 66789864
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.50 E-value=4.3e-12 Score=128.07 Aligned_cols=279 Identities=10% Similarity=0.048 Sum_probs=192.0
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
+.++++-...|.-+++|..|++.+-.+..... ++++-++...+.|.+.| .| .. .+..++.. .. +.
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~---~d--~~--V~v~D~~~-~t-----~~ 213 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIG---RD--AR--IDMIDLWA-KE-----PT 213 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEE---TT--SE--EEEEETTS-SS-----CE
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEEC---CC--Ce--EEEEECcC-CC-----Cc
Confidence 34566667788899999999999988876554 89998999888877755 12 12 22222200 11 11
Q ss_pred cceeecccCCCCeEEeeCC---CCeEEE-eecCCCeEEEEEeeCceEEEEecc------------C-ceeEEEEe-CCEE
Q 015220 185 ALFESESLKWPGFVEFDDV---NGKVLT-YSAQDSIYKVFDLKNYTMLYSISD------------K-NVQEIKIS-PGIM 246 (411)
Q Consensus 185 ~LF~~~~l~~PgfvEFDd~---NGkiLt-~~~~ds~ykVWdL~~Ys~iysLs~------------~-~VqeIkIS-dG~~ 246 (411)
.+-+-..-.+|-.+.|+.. +|+.|. .+-.+++++|||..+.+++..++- + .+..|.+| +|-.
T Consensus 214 ~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 214 KVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred EEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 1222122346888999761 666554 444689999999999999988863 2 68899999 4655
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee--EEe-ecCceeeEEEcccceEEEeecc-ccCC
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL--LVK-QENENLQILDVRNFELTEVSRT-EFMT 322 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl--lIK-Qe~~~LkI~dL~t~e~~~v~~T-~f~h 322 (411)
+++.....+ -|.+|++.+++.+.... +++.+.+.-+..++++. ++. +.+++|.+||+.++++...-.+ .-.|
T Consensus 294 ~~vs~~~~g--~i~vvd~~~~~~l~~~~--i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph 369 (543)
T 1nir_A 294 FIVNVKETG--KVLLVNYKDIDNLTVTS--IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPH 369 (543)
T ss_dssp EEEEETTTT--EEEEEECTTSSSCEEEE--EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBC
T ss_pred EEEEECCCC--eEEEEEecCCCcceeEE--eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCC
Confidence 555554443 67899999998776222 34556677788888864 444 4688999999999998873222 2236
Q ss_pred Cc-eEEEEe--eceeEEEE--ecCeEEEEecC--------CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCC
Q 015220 323 PS-AFIFLY--ENQLFLTF--RNRTVAVWNFR--------GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSD 389 (411)
Q Consensus 323 ps-AfifLy--~sqlFlSf--sd~tI~iWn~~--------Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~ 389 (411)
|. ...|.. ..++|+|. .|++|.||+.+ ++.+.++..|-. ..-.|..+|||..|.+.+.-.++
T Consensus 370 ~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~-----~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 370 PGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG-----GSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp CTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS-----CCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC-----CceEEEcCCCCCcEEEecCCCCC
Confidence 63 333332 25788887 47999999986 578999999976 45568899999999998842210
Q ss_pred CccccCCceEEEeeecceeee
Q 015220 390 DPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 390 ~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+..++|.+||+.|+++.
T Consensus 445 ---~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 445 ---ARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ---HHHHTCEEEEETTCTTSC
T ss_pred ---cccCceEEEEECCCCCCC
Confidence 012359999999999864
No 133
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.49 E-value=4.5e-12 Score=112.54 Aligned_cols=197 Identities=12% Similarity=0.072 Sum_probs=134.7
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC--------ceeEEEEe-CCEEEEEEecC---------CC
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--------NVQEIKIS-PGIMLLIFTKA---------SG 255 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--------~VqeIkIS-dG~~Lai~q~t---------~~ 255 (411)
.|..+.|+.-..++++....++.+.+||+.+.+.+..+... .+..+.+| ||..|++.... ..
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 37778886433346677778999999999999988877632 27899999 88888877643 01
Q ss_pred ceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeec-cccCCC-----------
Q 015220 256 HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSR-TEFMTP----------- 323 (411)
Q Consensus 256 ~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~-T~f~hp----------- 323 (411)
.-.|.+|++++|+....... +.+...+..+..++++-++. .++.|.+||+.+++....-+ ..+..|
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~l~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRT-FPMPRQVYLMRAADDGSLYV-AGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEE-EECCSSCCCEEECTTSCEEE-ESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred CCeEEEEECCCccccceeee-ccCCCcccceeECCCCcEEE-ccCcEEEEeCCCCceeccccccccCCccccCccceeee
Confidence 13689999999776554332 23334577777887765444 35559999999998776222 111111
Q ss_pred ------------ceEE-----------------------------------------EE---e-ec-eeEEEEecCeEEE
Q 015220 324 ------------SAFI-----------------------------------------FL---Y-EN-QLFLTFRNRTVAV 345 (411)
Q Consensus 324 ------------sAfi-----------------------------------------fL---y-~s-qlFlSfsd~tI~i 345 (411)
..+. .+ . .. .+|++ +++|.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAK 279 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEE
Confidence 0000 01 1 12 34444 889999
Q ss_pred EecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 346 WNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 346 Wn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
||+. |+++.++..+. ....+.+||||+.|++++.+. +|.+||..||+++
T Consensus 280 ~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~----------~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 280 YDLKQRKLIKAANLDH------TYYCVAFDKKGDKLYLGGTFN----------DLAVFNPDTLEKV 329 (349)
T ss_dssp EETTTTEEEEEEECSS------CCCEEEECSSSSCEEEESBSS----------EEEEEETTTTEEE
T ss_pred EECccCeEEEEEcCCC------CccceEECCCCCEEEEecCCC----------eEEEEecccccee
Confidence 9998 88888876432 245799999999888865554 9999999999875
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=8.2e-13 Score=131.55 Aligned_cols=224 Identities=9% Similarity=-0.004 Sum_probs=151.9
Q ss_pred eEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc-----eeEEEE
Q 015220 167 CRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-----VQEIKI 241 (411)
Q Consensus 167 cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-----VqeIkI 241 (411)
++.++++++..+++... ...|.|- ++|+.++ ...|+++++||+.+.+....+.++. |..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~--------~~~~~~s----pdg~~~~-~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~ 68 (723)
T 1xfd_A 2 KKKVTVEDLFSEDFKIH--------DPEAKWI----SDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI 68 (723)
T ss_dssp CCCCCHHHHTCTTTCCC--------CCCCCBS----SSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE
T ss_pred CccccHHHHhCCCCccc--------ccccEEc----CCCcEEE-EeCCCCEEEEECCCCcEEEEeccccccccccceEEE
Confidence 45577888888765321 1222222 4788554 4788999999999999888887653 899999
Q ss_pred e-CCEEEEEEecCCC------ceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEe-ecCceeeEEEcccceEE
Q 015220 242 S-PGIMLLIFTKASG------HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELT 313 (411)
Q Consensus 242 S-dG~~Lai~q~t~~------~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIK-Qe~~~LkI~dL~t~e~~ 313 (411)
| ||..|++...... ..-+.||++.+|+. ..+...-++...+..+..++++-.|+ ..+..|.+||+.+++..
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~ 147 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAI 147 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCE
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceE
Confidence 9 9998888765432 26788999999987 44333345555688999999885333 34479999999999888
Q ss_pred Eeecccc------CCCc---------eEEEEeec---eeEEEE-ec----------------------------------
Q 015220 314 EVSRTEF------MTPS---------AFIFLYEN---QLFLTF-RN---------------------------------- 340 (411)
Q Consensus 314 ~v~~T~f------~hps---------AfifLy~s---qlFlSf-sd---------------------------------- 340 (411)
.+....- ++|. .+..+..+ +.+++. .+
T Consensus 148 ~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 148 RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 7532210 0011 01233333 444433 22
Q ss_pred CeEEEEecC-Cceeeeeccccc-cCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 341 RTVAVWNFR-GELVTSFEDHLL-WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 341 ~tI~iWn~~-Gel~~s~e~H~~-~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+|.+||+. |+..+.+..|.. ...+..+..+..||||++|++.+... ...++|.+||+.||++.
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~------~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA------QNVSILTLCDATTGVCT 293 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT------SCEEEEEEEETTTCCEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC------CCeEEEEEEeCCCCcce
Confidence 289999999 666677776521 11234678899999999998887664 23469999999999874
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.48 E-value=7.3e-12 Score=111.81 Aligned_cols=189 Identities=9% Similarity=0.038 Sum_probs=131.0
Q ss_pred eeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE-EeEeee
Q 015220 200 FDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV-LKSFNH 275 (411)
Q Consensus 200 FDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~-L~t~~~ 275 (411)
|+...+++++....++++.|||+.+.+.+..+.. ..+ .+.+| ||..|++...... -|.+|++++|++ ...
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~--~i~~~d~~~~~~~~~~--- 78 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQ--TLVQIETQLEPPKVVA--- 78 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTC--EEEEEECSSSSCEEEE---
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCC--eEEEEECCCCceeEEe---
Confidence 6777889999999999999999999998877763 366 89999 8887777666554 678899999998 555
Q ss_pred ccccCCcceeeeeeccee--EEeecC-c--eeeEEEcccceEEEeeccccCCCceEEEEeec----eeEEEEe-cCe-EE
Q 015220 276 LLHRNKKVDFIEQFNEKL--LVKQEN-E--NLQILDVRNFELTEVSRTEFMTPSAFIFLYEN----QLFLTFR-NRT-VA 344 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ekl--lIKQe~-~--~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s----qlFlSfs-d~t-I~ 344 (411)
+-++..+..-+..++++- +...++ + .|.+||+.+++....-.. -.+| ..++.+ .+|++.. +++ |.
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~---~~~~~spdg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDA---VGIAISPNGNGLILIDRSSANTVR 154 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTE---EEEEECTTSSCEEEEEETTTTEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCc---cceEECCCCCEEEEEecCCCceEE
Confidence 334555555488887754 433333 2 899999999998763211 1233 444433 4777764 477 99
Q ss_pred EEecCC-ceeeeeccccccCCCCccceEEEcCCCCEE-EEEecCCCCCccccCCceEEEeeecceee
Q 015220 345 VWNFRG-ELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 345 iWn~~G-el~~s~e~H~~~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+|+++. ..+.... ............+.++|||+.| +++..+ |+|.+||+.+|++
T Consensus 155 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~----------~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 155 RFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLIG----------NSIGILETQNPEN 210 (331)
T ss_dssp EEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETTT----------TEEEEEECSSTTS
T ss_pred EEEECCCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCCC----------CeEEEEECCCCcc
Confidence 999982 2232222 2222334457889999999955 444344 4999999999986
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.47 E-value=1.6e-11 Score=109.51 Aligned_cols=207 Identities=9% Similarity=0.015 Sum_probs=150.3
Q ss_pred cccCCCCeEEeeCCCCeEEEeecC------CCeEEEEEeeCceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeEE
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQ------DSIYKVFDLKNYTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKI 261 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~------ds~ykVWdL~~Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKI 261 (411)
..-..|--+.|+....++.+.+.. ++.+.+||+.+.+.+..+.. ..+..+.++ ||..+++.....+ .|.+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~--~v~~ 115 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS--AVTA 115 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT--EEEE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC--EEEE
Confidence 334567788999877777777765 78999999999999888873 478899999 7877777666554 6789
Q ss_pred EEecCCcEEeEeeeccccCC--------cceeeeeecce--eEEee--cCceeeEEEcccceEEEeeccccCCCceEEEE
Q 015220 262 LSIEDGTVLKSFNHLLHRNK--------KVDFIEQFNEK--LLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFL 329 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K--------~I~FLE~~~ek--llIKQ--e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifL 329 (411)
|++++|+++.++.. +... .+.-+..++++ +++.. .+..|.+||+.+++....-......|..+.+-
T Consensus 116 ~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 116 IDAKTGEVKGRLVL--DDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp EETTTCCEEEEEES--CCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred EeCCCCeeEEEEec--CCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 99999999988552 3222 14567887764 56665 36789999999999887333122235555544
Q ss_pred eec-eeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 330 YEN-QLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 330 y~s-qlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
... .+|++-.++.|.+||+. |+++.++..... .+......+.++|||+.|+..+.+ .|+|.+||+.+|
T Consensus 194 ~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~---------~~~v~~~d~~~~ 263 (353)
T 3vgz_A 194 SEGKRLYTTNADGELITIDTADNKILSRKKLLDD-GKEHFFINISLDTARQRAFITDSK---------AAEVLVVDTRNG 263 (353)
T ss_dssp TTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS-SSCCCEEEEEEETTTTEEEEEESS---------SSEEEEEETTTC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC-CCCcccceEEECCCCCEEEEEeCC---------CCEEEEEECCCC
Confidence 333 56666689999999998 888877664221 123367789999999987766543 369999999999
Q ss_pred eee
Q 015220 408 TCK 410 (411)
Q Consensus 408 k~~ 410 (411)
+++
T Consensus 264 ~~~ 266 (353)
T 3vgz_A 264 NIL 266 (353)
T ss_dssp CEE
T ss_pred cEE
Confidence 874
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.47 E-value=8e-12 Score=120.05 Aligned_cols=175 Identities=14% Similarity=0.063 Sum_probs=131.7
Q ss_pred CeEEEEEeeCceEEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecc
Q 015220 215 SIYKVFDLKNYTMLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE 291 (411)
Q Consensus 215 s~ykVWdL~~Ys~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~e 291 (411)
+++++||+.+.. +..|. ...|..+++| ||..|+.........-|++|++.+|+... +..+...+..+..+++
T Consensus 159 ~~i~i~d~~g~~-~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~----l~~~~~~~~~~~~spd 233 (415)
T 2hqs_A 159 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----VASFPRHNGAPAFSPD 233 (415)
T ss_dssp EEEEEEETTSCS-CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----EECCSSCEEEEEECTT
T ss_pred ceEEEEcCCCCC-CEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE----eecCCCcccCEEEcCC
Confidence 799999998644 44554 3389999999 89988888877667789999999999863 4566678889999988
Q ss_pred eeEEe---ec--CceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEe--cC--eEEEEecCCceeeeeccc
Q 015220 292 KLLVK---QE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFR--NR--TVAVWNFRGELVTSFEDH 359 (411)
Q Consensus 292 kllIK---Qe--~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfs--d~--tI~iWn~~Gel~~s~e~H 359 (411)
+-.|. +. +..|.+||+.+++.. ++..|+..+..+..+ +.+++.+ ++ .|.+||+.+.-++.+..|
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~ 309 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIR----QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE 309 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE----ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEE----eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC
Confidence 75333 22 456999999999875 455677777777765 4344333 34 677779885445566666
Q ss_pred cccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 360 LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 360 ~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.. .+..+.+||||+.|++++.++ +.++|.+||+.||++.
T Consensus 310 ~~-----~~~~~~~spdG~~l~~~~~~~-------g~~~i~~~d~~~~~~~ 348 (415)
T 2hqs_A 310 GS-----QNQDADVSSDGKFMVMVSSNG-------GQQHIAKQDLATGGVQ 348 (415)
T ss_dssp SS-----EEEEEEECTTSSEEEEEEECS-------SCEEEEEEETTTCCEE
T ss_pred CC-----cccCeEECCCCCEEEEEECcC-------CceEEEEEECCCCCEE
Confidence 54 567899999999999998773 3569999999999864
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.45 E-value=2.2e-11 Score=107.23 Aligned_cols=188 Identities=12% Similarity=0.051 Sum_probs=132.5
Q ss_pred eEEEeecCCCeEEEEEeeCceEEEEec-cC---ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc--
Q 015220 206 KVLTYSAQDSIYKVFDLKNYTMLYSIS-DK---NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH-- 278 (411)
Q Consensus 206 kiLt~~~~ds~ykVWdL~~Ys~iysLs-~~---~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~-- 278 (411)
..|+....++.+.+||+.+.+.+.++. ++ .+..+.+| ||..|++...... .|.+|++.+|+.+.++..--+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSE--SLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTT--EEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCC--eEEEEECCCCCeEeeEEcCCccc
Confidence 467788889999999999999998887 34 58999999 7866666554433 488999999999987552110
Q ss_pred cCCcceeeeeecce--eEEee------------cCceeeEEEcccceEEEeeccccCCCceEEEEeece-eEEEEecCeE
Q 015220 279 RNKKVDFIEQFNEK--LLVKQ------------ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQ-LFLTFRNRTV 343 (411)
Q Consensus 279 h~K~I~FLE~~~ek--llIKQ------------e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sq-lFlSfsd~tI 343 (411)
+...+..+..++++ +++.+ .+..|.+||+.+++....-.. -..|..+.+-...+ +|++ ++.|
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i 156 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDL 156 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeE
Confidence 12357778888765 45554 469999999999887653222 22344444332223 5555 8999
Q ss_pred EEEecC-Cceeeeecccc-----ccCCCC---------------------------------------------------
Q 015220 344 AVWNFR-GELVTSFEDHL-----LWHPDC--------------------------------------------------- 366 (411)
Q Consensus 344 ~iWn~~-Gel~~s~e~H~-----~~~~~c--------------------------------------------------- 366 (411)
.+||+. |+++..+..+. .|+|+-
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 999998 88887766544 122221
Q ss_pred -----ccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 367 -----NTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 367 -----~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
....+.+||||+.|+++ + |+|.+||+.+|+.+
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~--~----------~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA--Y----------NVLESFDLEKNASI 273 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE--E----------SEEEEEETTTTEEE
T ss_pred CCCCCceeeEEECCCCCEEEEe--C----------CeEEEEECCCCcCc
Confidence 12347899999988877 3 49999999999864
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=1.9e-11 Score=108.50 Aligned_cols=150 Identities=8% Similarity=0.091 Sum_probs=107.4
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccC---ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK---NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~---~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
.+++.++....++.+.|||+.+.+.+.++... .+..+.+| ||..+++.....+ -|.+|++.||+.+..+. ++
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~--~i~~~d~~t~~~~~~~~--~~ 84 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG--DIYGIDLDTCKNTFHAN--LS 84 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTT--EEEEEETTTTEEEEEEE--SC
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCC--cEEEEeCCCCcEEEEEE--cc
Confidence 47889999999999999999999999888744 58899999 7876666664444 47889999999988754 23
Q ss_pred c-----CCcceeeeeecce--eEEeecC------------ceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEE
Q 015220 279 R-----NKKVDFIEQFNEK--LLVKQEN------------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFL 336 (411)
Q Consensus 279 h-----~K~I~FLE~~~ek--llIKQe~------------~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFl 336 (411)
+ .+.+..+..++++ +++...+ ..|.+||+.+++..+.- ..+.+|..+..++.+ ++|+
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV-RTFPMPRQVYLMRAADDGSLYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS-EEEECCSSCCCEEECTTSCEEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccccee-eeccCCCcccceeECCCCcEEE
Confidence 3 3447788898875 4555543 89999999996543311 122344444434333 5554
Q ss_pred EEecCeEEEEecC-Cceeeeeccc
Q 015220 337 TFRNRTVAVWNFR-GELVTSFEDH 359 (411)
Q Consensus 337 Sfsd~tI~iWn~~-Gel~~s~e~H 359 (411)
.++.|.+||+. |+++.++..+
T Consensus 164 --~~~~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 164 --AGPDIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp --ESSSEEEECTTTCCEEEEECST
T ss_pred --ccCcEEEEeCCCCceecccccc
Confidence 35569999998 8888877644
No 140
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.39 E-value=6e-11 Score=114.01 Aligned_cols=189 Identities=11% Similarity=0.064 Sum_probs=137.9
Q ss_pred EEeeCCCCeEEEeecCCC---eEEEEEeeCceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 198 VEFDDVNGKVLTYSAQDS---IYKVFDLKNYTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds---~ykVWdL~~Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+.| .++|+.|++...++ ++++||+.+.+......+ ..+..+++| ||..|++........-|.+|++.+|++. .
T Consensus 184 ~~~-Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~ 261 (415)
T 2hqs_A 184 PAW-SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-Q 261 (415)
T ss_dssp EEE-CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E
T ss_pred eEE-cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-e
Confidence 344 36899888888775 999999999887643322 378999999 8988887666666778999999999873 3
Q ss_pred eeeccccCCcceeeeeeccee--EEeec-Cc--eeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEE-ec---
Q 015220 273 FNHLLHRNKKVDFIEQFNEKL--LVKQE-NE--NLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTF-RN--- 340 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekl--lIKQe-~~--~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf-sd--- 340 (411)
+.+|...+..+..++++- +..+. +. .|.+||+.+++...+ ..+...+..+..+ +.+++. .+
T Consensus 262 ---l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l----~~~~~~~~~~~~spdG~~l~~~~~~~g~ 334 (415)
T 2hqs_A 262 ---VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRI----TWEGSQNQDADVSSDGKFMVMVSSNGGQ 334 (415)
T ss_dssp ---CCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEEC----CCSSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred ---CcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEE----ecCCCcccCeEECCCCCEEEEEECcCCc
Confidence 567778888889888864 33443 22 677789999987653 3355566566655 333333 33
Q ss_pred CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 341 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 341 ~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+|.+||+.+.-++.+..|. .+..+..||||+.|++++.+. +.++|.+||+.+++
T Consensus 335 ~~i~~~d~~~~~~~~l~~~~------~~~~~~~spdg~~l~~~s~~~-------~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 335 QHIAKQDLATGGVQVLSSTF------LDETPSLAPNGTMVIYSSSQG-------MGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEEEETTTCCEEECCCSS------SCEEEEECTTSSEEEEEEEET-------TEEEEEEEETTSCC
T ss_pred eEEEEEECCCCCEEEecCCC------CcCCeEEcCCCCEEEEEEcCC-------CccEEEEEECCCCc
Confidence 59999999944345676663 578899999999999999875 24589999987654
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.35 E-value=6.8e-10 Score=97.99 Aligned_cols=197 Identities=13% Similarity=0.145 Sum_probs=126.8
Q ss_pred cCCCCeEEeeCCCCe-EEEeecCCCeEEEEEee--Cc--eEEEEec-cCceeEEEEe-CCEEEEEEecCCCceeeEEEEe
Q 015220 192 LKWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLK--NY--TMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSI 264 (411)
Q Consensus 192 l~~PgfvEFDd~NGk-iLt~~~~ds~ykVWdL~--~Y--s~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I 264 (411)
...|..+.|+. +|+ +++.+..++.+++|++. +. +.+..+. ...+..+.+| ||..|++.....+ .|.+|++
T Consensus 37 ~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~--~i~~~d~ 113 (343)
T 1ri6_A 37 PGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAG--NVSVTRL 113 (343)
T ss_dssp SSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTT--EEEEEEE
T ss_pred CCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCCC--eEEEEEC
Confidence 34688899975 566 55545545999999998 43 3555555 3388999999 8887777765444 4799999
Q ss_pred cCC---cEEeEeeeccccCCcceeeeeecce--eEEee-cCceeeEEEccc-ceEEEee--ccccCCCceEEEEeec---
Q 015220 265 EDG---TVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQ-ENENLQILDVRN-FELTEVS--RTEFMTPSAFIFLYEN--- 332 (411)
Q Consensus 265 ~tG---~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQ-e~~~LkI~dL~t-~e~~~v~--~T~f~hpsAfifLy~s--- 332 (411)
.+| +.+.. +.....+..+..++++ +++.. .+..|.+||+.+ ++...+. ............++.+
T Consensus 114 ~~~~~~~~~~~----~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 114 EDGLPVGVVDV----VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp ETTEEEEEEEE----ECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred CCCcccccccc----ccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 544 44444 3334568888898875 56666 789999999998 7665432 1111111222233333
Q ss_pred e-eEEEE-ecCeEEEEecC---Cce--eeeeccc-cccCCCCccceEEEcCCCCEEEE-EecCCCCCccccCCceEEEee
Q 015220 333 Q-LFLTF-RNRTVAVWNFR---GEL--VTSFEDH-LLWHPDCNTNNIYITSDQDLIIS-YCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 333 q-lFlSf-sd~tI~iWn~~---Gel--~~s~e~H-~~~~~~c~~n~i~Is~Dqd~iiS-~~~d~~~~~~~~~~gtI~i~~ 403 (411)
+ +|++. .+++|.+|+++ |++ +..+... ..+........+.++|||+.|+. ...+ |+|.+||
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~----------~~i~v~d 259 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA----------SLITVFS 259 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT----------TEEEEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC----------CEEEEEE
Confidence 3 66676 78999999995 443 2222110 01112234557999999987764 4344 4999999
Q ss_pred ec
Q 015220 404 LM 405 (411)
Q Consensus 404 i~ 405 (411)
+.
T Consensus 260 ~~ 261 (343)
T 1ri6_A 260 VS 261 (343)
T ss_dssp EC
T ss_pred Ec
Confidence 98
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.35 E-value=1.3e-10 Score=99.20 Aligned_cols=196 Identities=12% Similarity=0.052 Sum_probs=137.0
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeC-ceEEEEecc---CceeEEEEe-CCEEEEEEecC-CCceeeEEEEecCCcEEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKN-YTMLYSISD---KNVQEIKIS-PGIMLLIFTKA-SGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~-Ys~iysLs~---~~VqeIkIS-dG~~Lai~q~t-~~~ipiKIl~I~tG~~L~ 271 (411)
+.|. ++|+.|++.. ++.+.+||+.+ .+....... ..|..+++| ||..|++.... ....-|.++++.+++. .
T Consensus 47 ~~~s-pdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~ 123 (297)
T 2ojh_A 47 PNWS-PDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-R 123 (297)
T ss_dssp EEEC-TTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-E
T ss_pred eEEC-CCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-E
Confidence 4453 5788777765 78999999999 776655543 367889999 88887777643 3456666667777763 3
Q ss_pred EeeeccccCCcceeeeeeccee--E-EeecCceeeEEEc--ccceEEEeeccccCCCceEEEEeec---e-eEEEE-ecC
Q 015220 272 SFNHLLHRNKKVDFIEQFNEKL--L-VKQENENLQILDV--RNFELTEVSRTEFMTPSAFIFLYEN---Q-LFLTF-RNR 341 (411)
Q Consensus 272 t~~~LL~h~K~I~FLE~~~ekl--l-IKQe~~~LkI~dL--~t~e~~~v~~T~f~hpsAfifLy~s---q-lFlSf-sd~ 341 (411)
. +.+..++..+..++++- + ....+..++||++ .+++... +..++..+..+..+ + ++++. .++
T Consensus 124 ~----~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 124 L----MTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR----LTHGEGRNDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp E----CCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE----CCCSSSCEEEEEECTTSSEEEEEECTTS
T ss_pred E----eecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE----cccCCCccccceECCCCCEEEEEecCCC
Confidence 2 23334577788887764 3 3557788999985 4566554 34456666666654 3 44455 488
Q ss_pred eEEEEecC--CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccc-cCCceEEEeeecceee
Q 015220 342 TVAVWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA-EGNGKLFVSLLMFVTC 409 (411)
Q Consensus 342 tI~iWn~~--Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~-~~~gtI~i~~i~tGk~ 409 (411)
++++|+++ +..++.+..|.. .+..+.++|||+.|+.++.+....... ...+.|.+||+.+|+.
T Consensus 196 ~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 196 QMQIWRVRVDGSSVERITDSAY-----GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SCEEEEEETTSSCEEECCCCSE-----EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CccEEEECCCCCCcEEEecCCc-----ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 99999986 777888888876 778899999999999988875222111 1337899999999875
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.34 E-value=1.1e-10 Score=114.05 Aligned_cols=203 Identities=12% Similarity=0.061 Sum_probs=146.5
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCce----------------EEEEecc-CceeEEEEe-CCEEEEEEe-cCCCce
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT----------------MLYSISD-KNVQEIKIS-PGIMLLIFT-KASGHV 257 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys----------------~iysLs~-~~VqeIkIS-dG~~Lai~q-~t~~~i 257 (411)
.+.+...+|.+.+. ..++ ++||+..+.. ...++.. ..|..+..| ||.+|++.- -...--
T Consensus 41 ~lavs~~~~~l~~~-~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~ 118 (434)
T 2oit_A 41 LLAVSNKYGLVFAG-GASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGS 118 (434)
T ss_dssp CEEEETTTTEEEEE-ETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEE
T ss_pred EEEEecCCCEEEEE-CCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCc
Confidence 35566666665554 3344 8998865421 1122322 259999999 888888642 133445
Q ss_pred eeEEEEecCC--------cEEeEeeeccccCCcceeeeeecc-e--eEEeecCceeeEEEcccceEEEeeccccCCCceE
Q 015220 258 PLKILSIEDG--------TVLKSFNHLLHRNKKVDFIEQFNE-K--LLVKQENENLQILDVRNFELTEVSRTEFMTPSAF 326 (411)
Q Consensus 258 piKIl~I~tG--------~~L~t~~~LL~h~K~I~FLE~~~e-k--llIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAf 326 (411)
-|+||++.++ +.+..+..+-+|..+|..++-+++ . +.....+..++|||+++++... +...|...+
T Consensus 119 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~---~~~~~~~~v 195 (434)
T 2oit_A 119 IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC---ATLPSTVAV 195 (434)
T ss_dssp EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE---EEECGGGCE
T ss_pred eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee---eccCCCCce
Confidence 6899999987 555555656789999999999986 3 3446789999999999996654 445588889
Q ss_pred EEEeec---eeEEEE-ecCeEEEEecCCceeeeeccccccCCC--CccceEEEcCCCCEEEEEecCCCCCccccCCceEE
Q 015220 327 IFLYEN---QLFLTF-RNRTVAVWNFRGELVTSFEDHLLWHPD--CNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLF 400 (411)
Q Consensus 327 ifLy~s---qlFlSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~--c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~ 400 (411)
.+++.+ +.++++ .|++|.+||.+|+...++..|..++++ ..+..+.-++++.++++|+..+ +..+....+.
T Consensus 196 ~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~d---g~~~~~~~v~ 272 (434)
T 2oit_A 196 TSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAAD---GTLETSPDVV 272 (434)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETT---CCSSSCCEEE
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCC---CccCCCCceE
Confidence 999877 667777 899999999999999998888765543 3677888889999999988764 1123335799
Q ss_pred Eeeecce
Q 015220 401 VSLLMFV 407 (411)
Q Consensus 401 i~~i~tG 407 (411)
+||+.+.
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999764
No 144
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.34 E-value=1.4e-11 Score=129.48 Aligned_cols=149 Identities=9% Similarity=0.040 Sum_probs=116.3
Q ss_pred cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCC-----cceeeeeecceeEEee--cCceeeE
Q 015220 233 DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK-----KVDFIEQFNEKLLVKQ--ENENLQI 304 (411)
Q Consensus 233 ~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K-----~I~FLE~~~ekllIKQ--e~~~LkI 304 (411)
.+.|..++.| ||..||+...... ++||+.++ ++..+ .|.. .++.++.++|+.+|+. ++..|+|
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~---V~iwd~~~--~l~~l----~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGN---VSVFKDNK--MLTNL----DSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSC---EEEEETTE--EEEEC----CCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCc---EEEEeCCc--eeeec----cCCCccccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 3479999999 9999998876655 89999655 55552 2444 5999999999986654 7899999
Q ss_pred EEcccceE-------EE-eeccccCCCceEEEEeec--eeEEEE-ecCeEEEEecCCce----eeee-ccccccCCCCcc
Q 015220 305 LDVRNFEL-------TE-VSRTEFMTPSAFIFLYEN--QLFLTF-RNRTVAVWNFRGEL----VTSF-EDHLLWHPDCNT 368 (411)
Q Consensus 305 ~dL~t~e~-------~~-v~~T~f~hpsAfifLy~s--qlFlSf-sd~tI~iWn~~Gel----~~s~-e~H~~~~~~c~~ 368 (411)
||+.+++. .. +....-+|..++..++.+ . ++++ .|++|++|++++.. .+++ ++|.. .+
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~-----~V 229 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR-----KI 229 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS-----CC
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccC-----cE
Confidence 99999863 22 111225688999999877 7 6666 99999999999544 3468 58887 89
Q ss_pred ceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 369 NNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 369 n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
..|+.+ |+.|+|+| ++ +|++||+.+|++
T Consensus 230 ~svaFs--g~~LASa~-~~----------tIkLWd~~~~~~ 257 (588)
T 2j04_A 230 TDLKIV--DYKVVLTC-PG----------YVHKIDLKNYSI 257 (588)
T ss_dssp CCEEEE--TTEEEEEC-SS----------EEEEEETTTTEE
T ss_pred EEEEEE--CCEEEEEe-CC----------eEEEEECCCCeE
Confidence 999999 58888988 55 999999999987
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.25 E-value=5.8e-11 Score=119.13 Aligned_cols=190 Identities=9% Similarity=0.080 Sum_probs=133.2
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEeccC-----ceeEEEEe-CCEEEEEEecCCC------ceeeEEEEecCCcEE
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-----NVQEIKIS-PGIMLLIFTKASG------HVPLKILSIEDGTVL 270 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-----~VqeIkIS-dG~~Lai~q~t~~------~ipiKIl~I~tG~~L 270 (411)
++|+.+. ...++++++||+.+.+....+.++ .|..+++| ||..||+...... .--|.||++.+|+.+
T Consensus 25 ~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~ 103 (719)
T 1z68_A 25 SGQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV 103 (719)
T ss_dssp SSSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC
T ss_pred CCCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc
Confidence 5676554 456999999999999988777655 28999999 9998888765321 357999999999985
Q ss_pred eEeeeccccCCcceeeeeecceeEEe-ecCceeeEEEcccceEEEeeccccCCCc--------eE---------EEEeec
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPS--------AF---------IFLYEN 332 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ekllIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hps--------Af---------ifLy~s 332 (411)
.+.. | ...+..+..++++-.|+ ..+.+|.+||+.+++...+. ..+++. ++ ..++.+
T Consensus 104 ~~~~--l--~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~--~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 104 RGNE--L--PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQIT--FNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp CSSC--C--CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECC--CCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred ccee--c--CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEe--cCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 3211 2 24688899999886333 35779999999999987753 222222 11 123333
Q ss_pred ---eeEEEEe-cC----------------------------------eEEEEecC-Ccee--------eeeccccccCCC
Q 015220 333 ---QLFLTFR-NR----------------------------------TVAVWNFR-GELV--------TSFEDHLLWHPD 365 (411)
Q Consensus 333 ---qlFlSfs-d~----------------------------------tI~iWn~~-Gel~--------~s~e~H~~~~~~ 365 (411)
+.+++.+ |. +|.+||+. |+.. .+|.+|..
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~---- 253 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDY---- 253 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCE----
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcc----
Confidence 4444442 21 88999999 5442 34556776
Q ss_pred CccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee----ecceeee
Q 015220 366 CNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL----LMFVTCK 410 (411)
Q Consensus 366 c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~----i~tGk~~ 410 (411)
.+..+..||||+++++..... ..+..|.+|| +.||++.
T Consensus 254 -~~~~~~~SpD~~~~~~~~~~~------~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 254 -YFSWLTWVTDERVCLQWLKRV------QNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp -EEEEEEESSSSEEEEEEEESS------TTEEEEEEEEECSSSSSEECC
T ss_pred -eEEEeEEeCCCeEEEEEeccc------cCeEEEEEEcccCCCCCCceE
Confidence 688999999999998866543 2336899999 8999874
No 146
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.24 E-value=1.6e-08 Score=92.48 Aligned_cols=198 Identities=14% Similarity=0.125 Sum_probs=127.5
Q ss_pred CCCCeEEeeCCCCe-EEEeecCCCeEEEEEeeCceEEEEec------c----------CceeEEEEe-CCEEEEEEecCC
Q 015220 193 KWPGFVEFDDVNGK-VLTYSAQDSIYKVFDLKNYTMLYSIS------D----------KNVQEIKIS-PGIMLLIFTKAS 254 (411)
Q Consensus 193 ~~PgfvEFDd~NGk-iLt~~~~ds~ykVWdL~~Ys~iysLs------~----------~~VqeIkIS-dG~~Lai~q~t~ 254 (411)
..|-++.+ +|+ +++.+..++++.||++.+-..+..+. + ..+..+.+| ||.+|++.....
T Consensus 100 ~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 100 ADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT
T ss_pred CCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC
Confidence 46788888 444 66666689999999998644332221 1 135779999 898777776555
Q ss_pred CceeeEEEEecCCc-------EEeE---eeeccccCCcceeeeeecce--eEEee-cCceeeEEEcccceEEEeec--cc
Q 015220 255 GHVPLKILSIEDGT-------VLKS---FNHLLHRNKKVDFIEQFNEK--LLVKQ-ENENLQILDVRNFELTEVSR--TE 319 (411)
Q Consensus 255 ~~ipiKIl~I~tG~-------~L~t---~~~LL~h~K~I~FLE~~~ek--llIKQ-e~~~LkI~dL~t~e~~~v~~--T~ 319 (411)
+ -+.+|++..++ +... ....+.+...+.-+..++++ +++.. .++.|.+||+.+++...+.. +.
T Consensus 177 ~--~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 177 D--QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp T--EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred C--EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 4 46788887544 2211 12234555566779999886 45555 58899999999887644321 11
Q ss_pred cCCCceEEEEeec----eeEEEEec--CeEEEEecC---Cc--eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCC
Q 015220 320 FMTPSAFIFLYEN----QLFLTFRN--RTVAVWNFR---GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 320 f~hpsAfifLy~s----qlFlSfsd--~tI~iWn~~---Ge--l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
-.+......++.+ .+|++.++ ++|.+|+++ |. ++.++.. . .....+.+||||+.|++++.+.
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g----~~~~~~~~spdg~~l~~~~~~~- 327 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--G----IHPRNFIITPNGKYLLVACRDT- 327 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--S----SCCCEEEECTTSCEEEEEETTT-
T ss_pred CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--C----CCCceEEECCCCCEEEEEECCC-
Confidence 1111222333333 46677754 899999995 56 3444443 2 2456899999999888887542
Q ss_pred CCccccCCceEEEe--eecceeee
Q 015220 389 DDPLAEGNGKLFVS--LLMFVTCK 410 (411)
Q Consensus 389 ~~~~~~~~gtI~i~--~i~tGk~~ 410 (411)
++|.+| |..||++.
T Consensus 328 --------~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 328 --------NVIQIFERDQATGLLT 343 (361)
T ss_dssp --------TEEEEEEECTTTCCEE
T ss_pred --------CCEEEEEEECCCCcEe
Confidence 489995 66688864
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.24 E-value=4.2e-09 Score=95.45 Aligned_cols=203 Identities=12% Similarity=0.206 Sum_probs=129.1
Q ss_pred cccCCCCeEEeeCCCCeEEEeecC--CCeEEEEEeeCce--EEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEE
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQ--DSIYKVFDLKNYT--MLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKIL 262 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~--ds~ykVWdL~~Ys--~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl 262 (411)
.....|.++.|+. +|++++.+.. ++.+.+||+.+.+ .+.++. ...+..+.+| ||.+|++.....+ -+.+|
T Consensus 37 ~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~--~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKG--TAEVM 113 (347)
T ss_dssp EECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTT--EEEEE
T ss_pred eccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCC--EEEEE
Confidence 3457899999986 8885544432 6899999998766 555532 4588999999 8988888775443 47899
Q ss_pred Eec-CCcEEeEeeeccc--------cCCcceeeeeecceeEEee--cCceeeEEEcc-cceEEEeecccc---CCCceEE
Q 015220 263 SIE-DGTVLKSFNHLLH--------RNKKVDFIEQFNEKLLVKQ--ENENLQILDVR-NFELTEVSRTEF---MTPSAFI 327 (411)
Q Consensus 263 ~I~-tG~~L~t~~~LL~--------h~K~I~FLE~~~ekllIKQ--e~~~LkI~dL~-t~e~~~v~~T~f---~hpsAfi 327 (411)
++. +|+...-...... ....+..+..++++-++.. ++..+.+||+. +++...+..... ..|..+.
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~ 193 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLV 193 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEE
Confidence 995 5553322111111 1124777899888754443 46789999999 677665332111 1233322
Q ss_pred EEeece-eEEEE-ecCeEEEEecC---Cce--eeeeccccc-cCCCCccceEEEcCCCCEE-EEEecCCCCCccccCCce
Q 015220 328 FLYENQ-LFLTF-RNRTVAVWNFR---GEL--VTSFEDHLL-WHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEGNGK 398 (411)
Q Consensus 328 fLy~sq-lFlSf-sd~tI~iWn~~---Gel--~~s~e~H~~-~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~~~gt 398 (411)
|-...+ +|++. .+++|.+|+++ |++ +..+..+.. +........+.+||||+.| ++...+. +
T Consensus 194 ~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~----------~ 263 (347)
T 3hfq_A 194 FSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN----------T 263 (347)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT----------E
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC----------E
Confidence 222224 67766 78899999998 443 223332211 1122356789999999977 5555444 9
Q ss_pred EEEeeec
Q 015220 399 LFVSLLM 405 (411)
Q Consensus 399 I~i~~i~ 405 (411)
|.+||+.
T Consensus 264 v~v~~~~ 270 (347)
T 3hfq_A 264 LAVFAVT 270 (347)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999996
No 148
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.24 E-value=2.8e-09 Score=94.30 Aligned_cols=197 Identities=10% Similarity=0.246 Sum_probs=138.4
Q ss_pred ccCCCCeEEeeCCCCeEEEeecC-CCeEEEEEeeCceEEEEecc---CceeEEEEe-CCEEEEEEecCCCceeeEEEEec
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISD---KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~-ds~ykVWdL~~Ys~iysLs~---~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
.+..|--+.||+.+|++++.... ++.+.+|| .+.+.+.++.. ..+..+.++ +|.+++. ....+ -|.+|+ .
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~--~i~~~~-~ 149 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVV-ECKVM--RVIIFD-Q 149 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEE-ETTTT--EEEEEC-T
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEE-ECCCC--EEEEEc-C
Confidence 35678889999999999998864 88999999 66777777743 378899998 7875444 33333 467788 4
Q ss_pred CCcEEeEeeeccccCCcceeeeeecce-eEEe-ecCceeeEEEcccceEEEeecc-ccCCCceEEEEeeceeEEEE-ecC
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFNEK-LLVK-QENENLQILDVRNFELTEVSRT-EFMTPSAFIFLYENQLFLTF-RNR 341 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~ek-llIK-Qe~~~LkI~dL~t~e~~~v~~T-~f~hpsAfifLy~sqlFlSf-sd~ 341 (411)
+|+.+.++... ++...+.-|.+.+++ +++. ..++.|++||........+... .+..|..+.+-...++|++- .++
T Consensus 150 ~g~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 150 NGNVLHKFGCS-KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp TSCEEEEEECT-TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred CCCEEEEeCCC-CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 78888775421 334557788888765 4555 3578999999854433333221 13345544333333788888 455
Q ss_pred -eEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 342 -TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 342 -tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
.|.+|+..|+.++++..|... -....++++|||.++++ +.+. +|.+|++...
T Consensus 229 ~~i~~~~~~g~~~~~~~~~~~~---~~~~~i~~~~~g~l~vs-~~~~----------~v~v~~~~~~ 281 (286)
T 1q7f_A 229 FNLTIFTQDGQLISALESKVKH---AQCFDVALMDDGSVVLA-SKDY----------RLYIYRYVQL 281 (286)
T ss_dssp CEEEEECTTSCEEEEEEESSCC---SCEEEEEEETTTEEEEE-ETTT----------EEEEEECSCC
T ss_pred EEEEEECCCCCEEEEEcccCCC---CcceeEEECCCCcEEEE-CCCC----------eEEEEEcccc
Confidence 999999999999999877541 13458999999999998 5565 9999998654
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.23 E-value=8.7e-09 Score=87.82 Aligned_cols=242 Identities=12% Similarity=0.019 Sum_probs=148.6
Q ss_pred ccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhh-CCCCCCCcceeecccC
Q 015220 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRR-GKPDAGFALFESESLK 193 (411)
Q Consensus 115 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~-gk~~~~~~LF~~~~l~ 193 (411)
|.-.+||..+++...+.. ....|.++-++....-|++.+ +. +.+..+ +.. |+. ..++....-.
T Consensus 22 ~~i~~~d~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~----~~----~i~~~d---~~~~~~~---~~~~~~~~~~ 85 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQ--TPELFEAPNWSPDGKYLLLNS----EG----LLYRLS---LAGDPSP---EKVDTGFATI 85 (297)
T ss_dssp EEEEEEETTTTEEEEEEE--ESSCCEEEEECTTSSEEEEEE----TT----EEEEEE---SSSCCSC---EECCCTTCCC
T ss_pred eeEEEEeCCCCceeeecc--CCcceEeeEECCCCCEEEEEc----CC----eEEEEe---CCCCCCc---eEeccccccc
Confidence 344566666776665544 245677888887766555532 22 222222 222 221 1122211112
Q ss_pred CCCeEEeeCCCCeEEEeec--CCCeEEEEEeeC-ceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEE--ecC
Q 015220 194 WPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKN-YTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILS--IED 266 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~--~ds~ykVWdL~~-Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~--I~t 266 (411)
.+.-+.|. ++|+.|++.. .++..+||.+.. ......+.. ..+..+.+| ||..|++....... ++||. +.+
T Consensus 86 ~~~~~~~s-pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~l~~~~~~~ 162 (297)
T 2ojh_A 86 CNNDHGIS-PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQV--FDIYSMDIDS 162 (297)
T ss_dssp BCSCCEEC-TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTE--EEEEEEETTT
T ss_pred cccceEEC-CCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCc--eEEEEEECCC
Confidence 23345664 5788888777 446777777753 223455553 368888999 88877755555555 45555 556
Q ss_pred CcEEeEeeeccccCCcceeeeeeccee--EEee-cCceeeEEEcc-cceEEEeeccccCCCceEEEEeec---eeEEEE-
Q 015220 267 GTVLKSFNHLLHRNKKVDFIEQFNEKL--LVKQ-ENENLQILDVR-NFELTEVSRTEFMTPSAFIFLYEN---QLFLTF- 338 (411)
Q Consensus 267 G~~L~t~~~LL~h~K~I~FLE~~~ekl--lIKQ-e~~~LkI~dL~-t~e~~~v~~T~f~hpsAfifLy~s---qlFlSf- 338 (411)
++.. . +..+...+..+..++++- ++.. .+..++||++. +++... ++..|+..+..+..+ +.+++.
T Consensus 163 ~~~~-~---~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 163 GVET-R---LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVE---RITDSAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp CCEE-E---CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEE---ECCCCSEEEEEEEECTTSSEEEEEE
T ss_pred Ccce-E---cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcE---EEecCCcccCCeEECCCCCEEEEEE
Confidence 6653 3 556777888899988764 3344 47889999986 444333 444566666666655 333333
Q ss_pred ec-----------CeEEEEecC-Cce--eeeeccccccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 339 RN-----------RTVAVWNFR-GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 339 sd-----------~tI~iWn~~-Gel--~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
.+ +.|.+||+. |++ +..+.+|.. .+..+..||||+.|++++.++
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQG-----TMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTT-----TSCSCCBCTTSSEEEEEEECC
T ss_pred cCCCCCcccccCceEEEEEecCCCCceeeeccCCCCc-----ccccceECCCCCEEEEEEecc
Confidence 43 579999999 554 445667776 677889999999999999886
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.23 E-value=3.4e-10 Score=113.00 Aligned_cols=205 Identities=14% Similarity=0.033 Sum_probs=121.9
Q ss_pred hCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEecc-------------------Cce
Q 015220 177 RGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD-------------------KNV 236 (411)
Q Consensus 177 ~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs~-------------------~~V 236 (411)
.|.+-.|..++.+..-..+.-+.+- |..+++...++ + +||+++.+.+ ..+.+ ..|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v 84 (706)
T 2z3z_A 10 HGSLMPGGKEFYNFYPEYVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPS 84 (706)
T ss_dssp ------------------CTTCEEE---TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCC
T ss_pred cccccCCcccccccccccCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCc
Confidence 3555566666666544432223333 44566666677 7 9999998874 44433 358
Q ss_pred eEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeeccee-EEeecCceeeEEEccc-----
Q 015220 237 QEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKL-LVKQENENLQILDVRN----- 309 (411)
Q Consensus 237 qeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~t----- 309 (411)
..+.+| |+.+++..+ --+.+|++.+|++... ..+...+..+..++++- ++-..+..|.+||+.+
T Consensus 85 ~~~~~spd~~~~~~~~-----~~i~~~d~~~~~~~~l----~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 85 FRTLDAGRGLVVLFTQ-----GGLVGFDMLARKVTYL----FDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGM 155 (706)
T ss_dssp EEEEETTTTEEEEEET-----TEEEEEETTTTEEEEE----ECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCC
T ss_pred eeEEECCCCeEEEEEC-----CEEEEEECCCCceEEc----cCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccC
Confidence 999999 655555533 5789999999987553 45567788899998874 4445788999999999
Q ss_pred ceEEEeeccccCCC----------------ceEEEEeeceeEEEEe----------------------------------
Q 015220 310 FELTEVSRTEFMTP----------------SAFIFLYENQLFLTFR---------------------------------- 339 (411)
Q Consensus 310 ~e~~~v~~T~f~hp----------------sAfifLy~sqlFlSfs---------------------------------- 339 (411)
++...+ |...++ .++.|-.-.+.+++.+
T Consensus 156 g~~~~~--~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 156 SRAIAV--TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCEES--CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred CCcEEe--ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 888774 333222 3333322223333332
Q ss_pred cCeEEEEecC-Cceeeeec--cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 340 NRTVAVWNFR-GELVTSFE--DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e--~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+.+|.+||+. |+...... .|.. .+..+..||||+.|++.+.+.. ...++|.+||+.||
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~~~~~~~~-----~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK-----FLTNLSWSPDENILYVAEVNRA-----QNECKVNAYDAETG 294 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC-----EEEEEEECTTSSEEEEEEECTT-----SCEEEEEEEETTTC
T ss_pred eeEEEEEECCCCceEeeccCCCCce-----eEeeEEEECCCCEEEEEEeCCC-----CCeeEEEEEECCCC
Confidence 3689999999 66444332 3333 6889999999999999887751 23479999999999
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.23 E-value=2.9e-10 Score=113.93 Aligned_cols=198 Identities=10% Similarity=0.044 Sum_probs=138.4
Q ss_pred CCCeEEeeCCCCeEEEeecC-CC-----eEEEEEeeCceEEEEeccC--------------------------ceeEEEE
Q 015220 194 WPGFVEFDDVNGKVLTYSAQ-DS-----IYKVFDLKNYTMLYSISDK--------------------------NVQEIKI 241 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~-ds-----~ykVWdL~~Ys~iysLs~~--------------------------~VqeIkI 241 (411)
.|-.+.| .+||+.|++... ++ ++.+||+.+.+....+..+ .|..+.+
T Consensus 38 ~~~~~~~-SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 38 TLMKPKV-APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCEEEEE-CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCceE-ecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 3445566 468998888877 77 9999999999877666542 2788999
Q ss_pred e-CCEEEEEEecCCCceeeEEEEecCCc--EEeEeeeccccCCcceeeeeecceeEE-eecCceeeEEEcccceEEEeec
Q 015220 242 S-PGIMLLIFTKASGHVPLKILSIEDGT--VLKSFNHLLHRNKKVDFIEQFNEKLLV-KQENENLQILDVRNFELTEVSR 317 (411)
Q Consensus 242 S-dG~~Lai~q~t~~~ipiKIl~I~tG~--~L~t~~~LL~h~K~I~FLE~~~ekllI-KQe~~~LkI~dL~t~e~~~v~~ 317 (411)
| ||..|++... --|.+|++.+|+ .+.. +..+...+..+..++|+-.| -..+..|.+||+.+++...+..
T Consensus 117 SpDg~~l~~~~~----~~i~~~d~~~~~~~~~~~---l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 117 SPDAQRLLFPLG----GELYLYDLKQEGKAAVRQ---LTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp CTTSSEEEEEET----TEEEEEESSSCSTTSCCB---CCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred CCCCCEEEEEeC----CcEEEEECCCCCcceEEE---cccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 9 9998888775 578899999993 3333 56777889999999998633 3345689999999999887532
Q ss_pred cccC-----C-----------CceEEEEeece-eEEEEecC---------------------------------eEEEEe
Q 015220 318 TEFM-----T-----------PSAFIFLYENQ-LFLTFRNR---------------------------------TVAVWN 347 (411)
Q Consensus 318 T~f~-----h-----------psAfifLy~sq-lFlSfsd~---------------------------------tI~iWn 347 (411)
.... + +.++.|=.-.+ |+++-.|+ +|.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2110 0 12222222223 33333443 788899
Q ss_pred cCC-ceeeeec---cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 348 FRG-ELVTSFE---DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 348 ~~G-el~~s~e---~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.+ .-++.+. +|.. .+..+.. |||+.|+..+.+.. ...++|.+||+.||++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~-----~~~~~~~-pDg~~l~~~~~~~~-----~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDI-----YLARVNW-RDPQHLSFQRQSRD-----QKKLDLVEVTLASNQQR 325 (741)
T ss_dssp SSTTCCCEEECCCSCSSE-----EEEEEEE-EETTEEEEEEEETT-----SSEEEEEEEETTTCCEE
T ss_pred CCCCCceEEecCCCCcce-----EEEEEEe-CCCCEEEEEEeccc-----CCeEEEEEEECCCCceE
Confidence 886 4333332 3544 6788999 99999998887541 23479999999999874
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.22 E-value=9.7e-10 Score=108.07 Aligned_cols=186 Identities=11% Similarity=0.101 Sum_probs=121.6
Q ss_pred CCCCeEEEeecC-CCeEEEEEeeCceEEEEecc-C--ceeEEEEeCCEEEEEEec--CCCceeeEEEEe-cCCcEEeEee
Q 015220 202 DVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISD-K--NVQEIKISPGIMLLIFTK--ASGHVPLKILSI-EDGTVLKSFN 274 (411)
Q Consensus 202 d~NGkiLt~~~~-ds~ykVWdL~~Ys~iysLs~-~--~VqeIkISdG~~Lai~q~--t~~~ipiKIl~I-~tG~~L~t~~ 274 (411)
.+||+.|++.+. +++++||++.+.+.. .|+. + .|..+..||..+|+.... .....-|-++++ .+|+.. .
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~-- 105 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ-R-- 105 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE-E--
T ss_pred CCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc-c--
Confidence 368999998877 999999999776654 4553 3 688889996677776665 233333444444 134333 2
Q ss_pred eccccCCcceeeeeecce--eEEe-ecCceeeEEEcccceEEEeeccccCCCc-eEEEEeeceeEE-EEec----CeEEE
Q 015220 275 HLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRNFELTEVSRTEFMTPS-AFIFLYENQLFL-TFRN----RTVAV 345 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hps-AfifLy~sqlFl-Sfsd----~tI~i 345 (411)
+ .....+.....++++ +++. .....+.|||+.+++...+.. +|. .+.|=.-.+.++ +-.+ ++|.+
T Consensus 106 -l-~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~----~~~~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 106 -L-EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR----LPGFGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp -C-TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE----ESSCEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred -c-cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec----CCCceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 2 222234455666554 5444 455667799999999887532 222 222222224444 3355 68999
Q ss_pred EecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 346 WNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 346 Wn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
||+.+.-++.+.+|.. .++.+..||||+.|+++..+ +..+|.+||+.||++.
T Consensus 180 ~d~~~g~~~~l~~~~~-----~~~~~~~SpDG~~l~~~~~~--------~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 180 SNLSSGGLRVFDSGEG-----SFSSASISPGMKVTAGLETA--------REARLVTVDPRDGSVE 231 (582)
T ss_dssp EETTTCCCEEECCSSC-----EEEEEEECTTSCEEEEEECS--------SCEEEEEECTTTCCEE
T ss_pred EcCCCCCceEeecCCC-----ccccceECCCCCEEEEccCC--------CeeEEEEEcCCCCcEE
Confidence 9998444568889887 67999999999999944332 2348999999999863
No 153
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.21 E-value=6.7e-11 Score=115.57 Aligned_cols=169 Identities=10% Similarity=0.070 Sum_probs=120.8
Q ss_pred CeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc----------EEeEee--eccccCC
Q 015220 215 SIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT----------VLKSFN--HLLHRNK 281 (411)
Q Consensus 215 s~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~----------~L~t~~--~LL~h~K 281 (411)
+.+++|+--. .+.+..+.-+.+| ++-++++..... ++||+..+-. .+.++. ..+++..
T Consensus 23 ~~vri~~~~~-----~~~~~~~n~lavs~~~~~l~~~~~dg----v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPE-----ELPKERSSLLAVSNKYGLVFAGGASG----LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCS-----SCCCSCCBCEEEETTTTEEEEEETTE----EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCcc-----ccCCCCccEEEEecCCCEEEEECCCE----EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 5677776421 1445567778888 444555554332 7787764211 111111 1245677
Q ss_pred cceeeeeecceeEEe----e--cCceeeEEEcccc--------eEEEeeccccCCCceEEEEeec----eeEEEE-ecCe
Q 015220 282 KVDFIEQFNEKLLVK----Q--ENENLQILDVRNF--------ELTEVSRTEFMTPSAFIFLYEN----QLFLTF-RNRT 342 (411)
Q Consensus 282 ~I~FLE~~~ekllIK----Q--e~~~LkI~dL~t~--------e~~~v~~T~f~hpsAfifLy~s----qlFlSf-sd~t 342 (411)
+|..++.++++.+++ + .+..++|||+.++ +......+.-+|...+..+..+ ++|+|. .|++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 899999999887666 3 5789999999886 2222123566788999998865 578888 8999
Q ss_pred EEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 343 VAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 343 I~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
|++||++ |..+....+|.. .+..+..+|||+.|++|+.|. +|.+||+. |+
T Consensus 174 v~iwD~~~~~~~~~~~~~~~-----~v~~v~wspdg~~lasgs~dg----------~v~iwd~~-~~ 224 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTV-----AVTSVCWSPKGKQLAVGKQNG----------TVVQYLPT-LQ 224 (434)
T ss_dssp EEEEEESSSEEEEEEECGGG-----CEEEEEECTTSSCEEEEETTS----------CEEEECTT-CC
T ss_pred EEEEEcCCCcceeeccCCCC-----ceeEEEEcCCCCEEEEEcCCC----------cEEEEccC-Cc
Confidence 9999999 777777788877 899999999999999999987 99999987 44
No 154
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.19 E-value=6.5e-09 Score=91.95 Aligned_cols=200 Identities=12% Similarity=0.197 Sum_probs=138.7
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--------CceeEEEEe--CCEEEEEEecCCCceee
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KNVQEIKIS--PGIMLLIFTKASGHVPL 259 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--------~~VqeIkIS--dG~~Lai~q~t~~~ipi 259 (411)
..+..|--+-+| ++|++++....++.+.+||.. .+.+..+.. ..+..+.++ +|.+++...... --|
T Consensus 27 g~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~--~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT--HQI 102 (286)
T ss_dssp TCBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG--CEE
T ss_pred CccCCCceEEEC-CCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC--CEE
Confidence 456789999998 468899988889999999987 566666642 378899994 777665543222 247
Q ss_pred EEEEecCCcEEeEeeeccccCCcceeeeeecce-eEEee-cCceeeEEEcccceEEEeec-cccCCCceEEEEeeceeEE
Q 015220 260 KILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK-LLVKQ-ENENLQILDVRNFELTEVSR-TEFMTPSAFIFLYENQLFL 336 (411)
Q Consensus 260 KIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek-llIKQ-e~~~LkI~dL~t~e~~~v~~-T~f~hpsAfifLy~sqlFl 336 (411)
.+|+ .+|+.+.++. .++...+.-|.+.+++ +++.. .++.|.+||........+.. ..+..|..+.+-...++|+
T Consensus 103 ~~~d-~~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFG--ATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEC-TTSCEEEEEC--TTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEC-CCCcEEEEec--CccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 8899 8899888753 2344566778887665 56654 56889999965433333322 2233455444433347888
Q ss_pred EE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 337 TF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 337 Sf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+- .++.|.+|+..|+.+.++..+-. .-....|++++||.++++.+.+. +.|.+||. +|+.
T Consensus 180 ~~~~~~~i~~~~~~g~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~~~---------~~i~~~~~-~g~~ 240 (286)
T 1q7f_A 180 SDNRAHCVKVFNYEGQYLRQIGGEGI---TNYPIGVGINSNGEILIADNHNN---------FNLTIFTQ-DGQL 240 (286)
T ss_dssp EEGGGTEEEEEETTCCEEEEESCTTT---SCSEEEEEECTTCCEEEEECSSS---------CEEEEECT-TSCE
T ss_pred EECCCCEEEEEcCCCCEEEEEccCCc---cCCCcEEEECCCCCEEEEeCCCC---------EEEEEECC-CCCE
Confidence 87 68899999999999888865421 12567899999999999976541 37888884 5554
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.17 E-value=5.7e-08 Score=90.40 Aligned_cols=182 Identities=9% Similarity=0.019 Sum_probs=117.3
Q ss_pred CCCeEEEEEee-CceEEEEec------cCceeEEEEe-CCEEEEEEecCCCceeeEEEEec-CCcEEeEeeeccc-cCCc
Q 015220 213 QDSIYKVFDLK-NYTMLYSIS------DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE-DGTVLKSFNHLLH-RNKK 282 (411)
Q Consensus 213 ~ds~ykVWdL~-~Ys~iysLs------~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~-tG~~L~t~~~LL~-h~K~ 282 (411)
.+++++||++. +.+....+. ...+..+.+| ||..|++.+...+ -|.+|++. +|++......-++ +...
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~~g~~ 194 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTAN--KLWTHRKLASGEVELVGSVDAPDPGDH 194 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTSCEEEEEEEECSSTTCC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCC--EEEEEEECCCCCEEEeeeEecCCCCCC
Confidence 68899999997 466554443 3489999999 8988887765444 57889999 8987532222222 3455
Q ss_pred ceeeeeecce--eEEeec-CceeeEEEcc--cceEEE----ee--ccc-cCCCc------eEEEEe-ec----eeEEEEe
Q 015220 283 VDFIEQFNEK--LLVKQE-NENLQILDVR--NFELTE----VS--RTE-FMTPS------AFIFLY-EN----QLFLTFR 339 (411)
Q Consensus 283 I~FLE~~~ek--llIKQe-~~~LkI~dL~--t~e~~~----v~--~T~-f~hps------AfifLy-~s----qlFlSfs 339 (411)
+.-+..++++ +++..+ ++.+.+|++. +|+... ++ +.. .+|.. ....++ .+ .+|++-+
T Consensus 195 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 7778999887 455554 6899999875 566431 21 111 12211 233334 33 4566654
Q ss_pred c-C-----eEEEEecC--Cceeee--eccccccCCCCccceEEEcC---CCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 340 N-R-----TVAVWNFR--GELVTS--FEDHLLWHPDCNTNNIYITS---DQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 340 d-~-----tI~iWn~~--Gel~~s--~e~H~~~~~~c~~n~i~Is~---Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
+ + +|.+|+++ |++... +..+ +.+....+++|| ||+.|++++.+. |+|.||++.+
T Consensus 275 ~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~----~~~~~~~~a~sp~~~dg~~l~v~~~~~---------~~v~v~~~~~ 341 (365)
T 1jof_A 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPT----PTSGGHSNAVSPCPWSDEWMAITDDQE---------GWLEIYRWKD 341 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEEC----SSCCTTCCCEEECTTCTTEEEEECSSS---------CEEEEEEEET
T ss_pred CCCCCCCCeEEEEEECCCCCEEEeeeeeec----CCCCcccceecCCCcCCCEEEEEEcCC---------CeEEEEEEch
Confidence 3 3 89999984 775542 1221 123567899999 899999887652 5999999876
Q ss_pred eee
Q 015220 407 VTC 409 (411)
Q Consensus 407 Gk~ 409 (411)
+.+
T Consensus 342 ~~l 344 (365)
T 1jof_A 342 EFL 344 (365)
T ss_dssp TEE
T ss_pred hhC
Confidence 543
No 156
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.15 E-value=1.9e-09 Score=107.97 Aligned_cols=261 Identities=8% Similarity=0.036 Sum_probs=160.9
Q ss_pred cceeeecccccEEEEEeCCCC-----------------------ceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 116 VCAAFCRETNQRICFLNVTAD-----------------------EVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 116 ~c~af~~~t~~~ic~lN~s~~-----------------------evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
....+|..+|+..-.+..... .-|.++-++...+.|++++- ..+ +..
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~------~~i--~~~-- 134 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG------GEL--YLY-- 134 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET------TEE--EEE--
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC------CcE--EEE--
Confidence 566777777776666543211 23667778888888877553 122 222
Q ss_pred hhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc-----------------
Q 015220 173 EYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN----------------- 235 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~----------------- 235 (411)
++..|.-..-..|... -..+..+.|. ++|+.|++... +.+.+||+.+.+......+..
T Consensus 135 -d~~~~~~~~~~~l~~~--~~~~~~~~~S-PDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~ 209 (741)
T 2ecf_A 135 -DLKQEGKAAVRQLTHG--EGFATDAKLS-PKGGFVSFIRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMD 209 (741)
T ss_dssp -ESSSCSTTSCCBCCCS--SSCEEEEEEC-TTSSEEEEEET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSC
T ss_pred -ECCCCCcceEEEcccC--CcccccccCC-CCCCEEEEEeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccc
Confidence 2222200001122211 1123345565 68998888764 589999999987765444331
Q ss_pred -eeEEEEe-CCEEEEEEecCC------------------------------CceeeEEEEecC-CcEEeEeeecc--ccC
Q 015220 236 -VQEIKIS-PGIMLLIFTKAS------------------------------GHVPLKILSIED-GTVLKSFNHLL--HRN 280 (411)
Q Consensus 236 -VqeIkIS-dG~~Lai~q~t~------------------------------~~ipiKIl~I~t-G~~L~t~~~LL--~h~ 280 (411)
+..+..| ||..|++..... ...-|.+|++.+ |+.... .+ .+.
T Consensus 210 ~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~---~~~~~~~ 286 (741)
T 2ecf_A 210 RHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWI---DLGKEQD 286 (741)
T ss_dssp CCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEE---CCCSCSS
T ss_pred cccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEe---cCCCCcc
Confidence 4789999 898888775432 345788999999 986553 22 356
Q ss_pred CcceeeeeecceeEEe-------ecCceeeEEEcccceEEEeeccccC----CCceEEEEeeceeEEEE-ecCeEEEEec
Q 015220 281 KKVDFIEQFNEKLLVK-------QENENLQILDVRNFELTEVSRTEFM----TPSAFIFLYENQLFLTF-RNRTVAVWNF 348 (411)
Q Consensus 281 K~I~FLE~~~ekllIK-------Qe~~~LkI~dL~t~e~~~v~~T~f~----hpsAfifLy~sqlFlSf-sd~tI~iWn~ 348 (411)
..+..+.. +++-.|. +.+..|.+||+.+++...+...... ....+.|..-.+++++. .+++++||..
T Consensus 287 ~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 287 IYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred eEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 66777777 7655333 2357899999999998775332210 11233343334565555 7777888866
Q ss_pred C--CceeeeeccccccCCCCccceE-EEcCCCCEEEEEecCCCCCccccCCceEEEeeecc-ee
Q 015220 349 R--GELVTSFEDHLLWHPDCNTNNI-YITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF-VT 408 (411)
Q Consensus 349 ~--Gel~~s~e~H~~~~~~c~~n~i-~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t-Gk 408 (411)
+ |. ++.+..|.. .+..+ .+||||+.|+..+.++ +.++++||++.+ |+
T Consensus 366 ~~~~~-~~~l~~~~~-----~v~~~~~~s~dg~~l~~~~~~~-------~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 366 DSKGK-AAALTHGNW-----SVDELLAVDEKAGLAYFRAGIE-------SARESQIYAVPLQGG 416 (741)
T ss_dssp CSSSC-EEESCCSSS-----CEEEEEEEETTTTEEEEEECSS-------CTTCBEEEEEETTCC
T ss_pred cCCCC-eeeeeecce-----EEEeEeEEeCCCCEEEEEEeCC-------CCceEEEEEEEcCCC
Confidence 5 77 888888855 56666 5999999775444432 234789999875 54
No 157
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.12 E-value=6.1e-09 Score=96.08 Aligned_cols=181 Identities=9% Similarity=0.047 Sum_probs=132.0
Q ss_pred CeEEEeecCCCeEEEEEeeCceEEEEeccC---ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccC
Q 015220 205 GKVLTYSAQDSIYKVFDLKNYTMLYSISDK---NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN 280 (411)
Q Consensus 205 GkiLt~~~~ds~ykVWdL~~Ys~iysLs~~---~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~ 280 (411)
|++|+....++.+.+||.++.+.+.++..+ ++..+.++ +|.+|+.. .+ -+..|+. +|++++++.. +..
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~---~~--~V~~~d~-~G~~~W~~~~--~~~ 76 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSY---SK--GAKMITR-DGRELWNIAA--PAG 76 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEEC---BS--EEEEECT-TSCEEEEEEC--CTT
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeC---CC--CEEEECC-CCCEEEEEcC--CCC
Confidence 688999999999999999999999888864 58889998 88877732 22 3889999 9999999763 444
Q ss_pred CcceeeeeecceeEEee--c-CceeeEEEcccceEE-Eeec--c---ccCCCceEEEEeeceeEEEE-ecCeEEEEecCC
Q 015220 281 KKVDFIEQFNEKLLVKQ--E-NENLQILDVRNFELT-EVSR--T---EFMTPSAFIFLYENQLFLTF-RNRTVAVWNFRG 350 (411)
Q Consensus 281 K~I~FLE~~~ekllIKQ--e-~~~LkI~dL~t~e~~-~v~~--T---~f~hpsAfifLy~sqlFlSf-sd~tI~iWn~~G 350 (411)
.++.-....+++.++-. + +..+..+|- +|+.. +... . .+..|..+..+...+++++. .+++|..||+.|
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G 155 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNG 155 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTS
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCCC
Confidence 56766676666654433 3 567777776 56543 3321 1 11123333344445778877 789999999999
Q ss_pred ceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 351 ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 351 el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++.++..+. ....+...++|+++|+++.+. .|..+|..|||.+
T Consensus 156 ~~~w~~~~~~------~~~~~~~~~~g~~~v~~~~~~----------~v~~~d~~tG~~~ 199 (276)
T 3no2_A 156 QLLNSVKLSG------TPFSSAFLDNGDCLVACGDAH----------CFVQLNLESNRIV 199 (276)
T ss_dssp CEEEEEECSS------CCCEEEECTTSCEEEECBTTS----------EEEEECTTTCCEE
T ss_pred CEEEEEECCC------CccceeEcCCCCEEEEeCCCC----------eEEEEeCcCCcEE
Confidence 9999998752 233578899999999887664 8888998888864
No 158
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.10 E-value=5e-09 Score=96.68 Aligned_cols=198 Identities=15% Similarity=0.202 Sum_probs=139.1
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce-EEEEecc---------C--ceeEEEEeC--CEEEEEEecCCC
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-MLYSISD---------K--NVQEIKISP--GIMLLIFTKASG 255 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-~iysLs~---------~--~VqeIkISd--G~~Lai~q~t~~ 255 (411)
..+..|-.+-|| ++|++++....++.+++||..+-. .+.++.. + ....|.+++ |.+++.....++
T Consensus 88 ~~~~~p~gia~d-~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 88 NLFYLPHGLSID-TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTCSSEEEEEEC-TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CccCCceEEEEC-CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 446689999999 789999999999999999987643 6677631 1 678899994 665544432333
Q ss_pred ceeeEEEEecCCcEEeEeeec-------cccCCcceeeeeecc--eeEEee-cCceeeEEEcccceEEEeec-ccc-CCC
Q 015220 256 HVPLKILSIEDGTVLKSFNHL-------LHRNKKVDFIEQFNE--KLLVKQ-ENENLQILDVRNFELTEVSR-TEF-MTP 323 (411)
Q Consensus 256 ~ipiKIl~I~tG~~L~t~~~L-------L~h~K~I~FLE~~~e--kllIKQ-e~~~LkI~dL~t~e~~~v~~-T~f-~hp 323 (411)
-|.+|+ .+|+.+.++... -++-..+.-|.+.++ .+++.. +++.|++||..+|+....-. ..+ ..|
T Consensus 167 --~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 167 --RIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNV 243 (329)
T ss_dssp --EEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCE
T ss_pred --eEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCc
Confidence 477889 899998875421 012233677888875 566664 67889999999888776211 111 112
Q ss_pred c------eEEEEeeceeEEEE-ecCeEEEEecC-Cceeeeec---cccccCCCCccceEEEcCCCCEEEEEecCCCCCcc
Q 015220 324 S------AFIFLYENQLFLTF-RNRTVAVWNFR-GELVTSFE---DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (411)
Q Consensus 324 s------AfifLy~sqlFlSf-sd~tI~iWn~~-Gel~~s~e---~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~ 392 (411)
. .+++....+++++- .+.+|.+|++. |+++.++. +|.. ....|+++|||.++|+.+.+.
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~-----~p~~ia~~~dG~lyvad~~~~----- 313 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD-----MPHDIVASEDGTVYIGDAHTN----- 313 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS-----SEEEEEECTTSEEEEEESSSC-----
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC-----CeeEEEECCCCCEEEEECCCC-----
Confidence 2 23333333455554 45599999987 99999984 5655 678999999999999988776
Q ss_pred ccCCceEEEeeecc
Q 015220 393 AEGNGKLFVSLLMF 406 (411)
Q Consensus 393 ~~~~gtI~i~~i~t 406 (411)
+|.+|++..
T Consensus 314 -----~I~~~~~~~ 322 (329)
T 3fvz_A 314 -----TVWKFTLTE 322 (329)
T ss_dssp -----CEEEEEEEE
T ss_pred -----EEEEEeCCc
Confidence 999999853
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.10 E-value=6.2e-08 Score=88.53 Aligned_cols=239 Identities=12% Similarity=0.170 Sum_probs=140.5
Q ss_pred eEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCC----CeEEEEEeeC-
Q 015220 150 SLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQD----SIYKVFDLKN- 224 (411)
Q Consensus 150 slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~d----s~ykVWdL~~- 224 (411)
..+.|..|.+..=..+....++. ..|++ .++-.. ....|.++.|+. +|+.|.....+ +.+.+|++.+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~---~~g~~---~~~~~~-~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~ 85 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNE---ETGES---LPLSDA-EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKE 85 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEET---TTCCE---EEEEEE-ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETT
T ss_pred eEEEEEeccCCCCCCEEEEEEeC---CCCCE---EEeecc-cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCC
Confidence 45566666554323444444321 11221 122222 678899999975 67766555543 7999999987
Q ss_pred -c--eEEEEec--cCceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeecccc-----------CCcceeeee
Q 015220 225 -Y--TMLYSIS--DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHR-----------NKKVDFIEQ 288 (411)
Q Consensus 225 -Y--s~iysLs--~~~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h-----------~K~I~FLE~ 288 (411)
. +.+.++. ......+.+ ||.+|++.....+ .+.+|++.++..+......+.+ ...+..+..
T Consensus 86 ~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~--~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 86 KGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGG--SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp TTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTT--EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred CCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCC--EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 3 3555554 346777777 8888888765443 4789999865555432211111 122466888
Q ss_pred ecce--eEEee-cCceeeEEEcccce-------EE------EeeccccCCCceEEEEeec-eeEEEE-ecCeEEEEecC-
Q 015220 289 FNEK--LLVKQ-ENENLQILDVRNFE-------LT------EVSRTEFMTPSAFIFLYEN-QLFLTF-RNRTVAVWNFR- 349 (411)
Q Consensus 289 ~~ek--llIKQ-e~~~LkI~dL~t~e-------~~------~v~~T~f~hpsAfifLy~s-qlFlSf-sd~tI~iWn~~- 349 (411)
++++ +++.. ++..+.+|++.... +. .........|..+.|-... .+|++- .+++|.+|+++
T Consensus 163 spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 163 TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 8887 44544 47899999988543 21 1111222334433332222 466666 68999999998
Q ss_pred Cce--eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec--ceee
Q 015220 350 GEL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM--FVTC 409 (411)
Q Consensus 350 Gel--~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~--tGk~ 409 (411)
|.+ +.++..+.. ..-....+.+||||+.|+..+.+ +.++|.+|++. +|++
T Consensus 243 g~~~~~~~~~~~~~--~~~~~~~i~~spdg~~l~v~~~~--------~~~~i~v~~~~~~~g~~ 296 (361)
T 3scy_A 243 GMLDEIQTVAADTV--NAQGSGDIHLSPDGKYLYASNRL--------KADGVAIFKVDETNGTL 296 (361)
T ss_dssp TEEEEEEEEESCSS--CCCCEEEEEECTTSSEEEEEECS--------SSCEEEEEEECTTTCCE
T ss_pred CceEEeEEEecCCC--CCCCcccEEECCCCCEEEEECCC--------CCCEEEEEEEcCCCCcE
Confidence 654 223222111 00134689999999988655544 02499999994 6764
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.08 E-value=1e-08 Score=102.49 Aligned_cols=194 Identities=10% Similarity=0.004 Sum_probs=130.8
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEEecC----
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIED---- 266 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t---- 266 (411)
..+..+.|..- ++++.. .++++++||+.+.+....... ..+..+++| ||..|++... -.|.+|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~--~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~----~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF--TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRN----HNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEE--ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEET----TEEEEEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEE--ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEEC----CeEEEEecCccccc
Confidence 44667888755 776665 459999999999887655443 478999999 8988887532 3689999999
Q ss_pred -CcEEeEeeeccccCCc--------------ceeeeeecceeEEe--e--------------------------------
Q 015220 267 -GTVLKSFNHLLHRNKK--------------VDFIEQFNEKLLVK--Q-------------------------------- 297 (411)
Q Consensus 267 -G~~L~t~~~LL~h~K~--------------I~FLE~~~ekllIK--Q-------------------------------- 297 (411)
|+....+ ..+... +..+..++|+-.|. +
T Consensus 155 ~g~~~~~~---~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 155 MSRAIAVT---IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp CCCCEESC---SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred CCCcEEec---cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 8876531 222222 47788888875443 3
Q ss_pred -cCceeeEEEcccceEEEeeccccCCCceEEEEeec---e-eEEEEecC-----eEEEEecC-Cceeeeec--cccccCC
Q 015220 298 -ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---Q-LFLTFRNR-----TVAVWNFR-GELVTSFE--DHLLWHP 364 (411)
Q Consensus 298 -e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---q-lFlSfsd~-----tI~iWn~~-Gel~~s~e--~H~~~~~ 364 (411)
....|.+||+.+++...+... ..|...+..+..+ + ++++..++ +|.+||+. |+.++.+. .+..|..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTG-EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCC-SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CCeeEEEEEECCCCceEeeccC-CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 336799999999998764321 1344555556554 3 44444565 99999999 73444332 3333311
Q ss_pred CCccceEEEcC--CCCEEEEEecCCCCCccccCCceEEEeeec-ceee
Q 015220 365 DCNTNNIYITS--DQDLIISYCKADSDDPLAEGNGKLFVSLLM-FVTC 409 (411)
Q Consensus 365 ~c~~n~i~Is~--Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~-tGk~ 409 (411)
..+.+..|| ||++|++++.|. +++||++. +|+.
T Consensus 311 --~~~~~~~sp~~dg~~l~~~~~~g----------~~~l~~~~~~~~~ 346 (706)
T 2z3z_A 311 --PLHPLTFLPGSNNQFIWQSRRDG----------WNHLYLYDTTGRL 346 (706)
T ss_dssp --CCSCCEECTTCSSEEEEEECTTS----------SCEEEEEETTSCE
T ss_pred --ccCCceeecCCCCEEEEEEccCC----------ccEEEEEECCCCE
Confidence 246789999 999999887664 78888876 5553
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.07 E-value=4.9e-09 Score=107.60 Aligned_cols=210 Identities=9% Similarity=0.048 Sum_probs=141.2
Q ss_pred EeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc-----e--eEEE
Q 015220 168 RSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-----V--QEIK 240 (411)
Q Consensus 168 r~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-----V--qeIk 240 (411)
+.++.+++..|..... .| .+. |- ++|+.+++. ++++++||+++.+....++.+. + .++.
T Consensus 3 ~~~tl~~~~~~~~~~~--~~---~~~------w~-~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (740)
T 4a5s_A 3 KTYTLTDYLKNTYRLK--LY---SLR------WI-SDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYS 68 (740)
T ss_dssp EECCHHHHHHTCSCCC--CC---CEE------EC-SSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEE
T ss_pred CceeHHHHhcCccccc--cc---ccE------EC-CCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceE
Confidence 4567889988865321 11 222 22 567877775 8999999999999877777653 2 3478
Q ss_pred Ee-CCEEEEEEecCCC------ceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-cCceeeEEEcccceE
Q 015220 241 IS-PGIMLLIFTKASG------HVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRNFEL 312 (411)
Q Consensus 241 IS-dG~~Lai~q~t~~------~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ-e~~~LkI~dL~t~e~ 312 (411)
+| ||..|++...... .-.+.||+++||++.. +..+...+.....++|+..|+- .+++|.+||+.+++.
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~----l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT----EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----SSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE----cccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 89 9998888876432 2567899999998653 5566778999999999874443 578999999999998
Q ss_pred EEeeccccCCCceEE-----------------EEeec---e-e-EEEEecC-----------------------------
Q 015220 313 TEVSRTEFMTPSAFI-----------------FLYEN---Q-L-FLTFRNR----------------------------- 341 (411)
Q Consensus 313 ~~v~~T~f~hpsAfi-----------------fLy~s---q-l-FlSfsd~----------------------------- 341 (411)
.++ |..+++.... .+.-| + | |.++.++
T Consensus 145 ~~l--t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 145 YRI--TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp EEC--CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred EEE--cCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 876 3322222110 01112 1 1 1111111
Q ss_pred ------eEEEEecCC---c---eeeeec------cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 342 ------TVAVWNFRG---E---LVTSFE------DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 342 ------tI~iWn~~G---e---l~~s~e------~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
+|.+||+.+ . -.+.+. +|.. .+..+.-||||++++...+.. ....+|.+||
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~wspdg~~~~~~~~r~------~~~~~i~~~d 291 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDH-----YLCDVTWATQERISLQWLRRI------QNYSVMDICD 291 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCE-----EEEEEEEEETTEEEEEEEESS------TTEEEEEEEE
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCe-----EEEEEEEeCCCeEEEEEeCCC------CCEEEEEEEE
Confidence 578888886 3 233343 2555 677889999999888877654 2236899999
Q ss_pred eccee
Q 015220 404 LMFVT 408 (411)
Q Consensus 404 i~tGk 408 (411)
+.||+
T Consensus 292 ~~tg~ 296 (740)
T 4a5s_A 292 YDESS 296 (740)
T ss_dssp EETTT
T ss_pred CCCCc
Confidence 99998
No 162
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.04 E-value=5e-08 Score=90.61 Aligned_cols=184 Identities=10% Similarity=0.129 Sum_probs=136.8
Q ss_pred CCCeEEEEEeeCceEEEEec--------cCceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcce
Q 015220 213 QDSIYKVFDLKNYTMLYSIS--------DKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVD 284 (411)
Q Consensus 213 ~ds~ykVWdL~~Ys~iysLs--------~~~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~ 284 (411)
.++++.+||.++.+....+. ....+.+.+.++.+.+..... --|.+||..||++++++. ....+.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~---~~v~viD~~t~~~~~~i~----~~~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS---HVIFAIDINTFKEVGRIT----GFTSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG---TEEEEEETTTCCEEEEEE----CCSSEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCC---CEEEEEECcccEEEEEcC----CCCCCc
Confidence 38999999999999887662 246788999888766665532 358889999999999963 335677
Q ss_pred eeee-ecceeEEee-cCceeeEEEcccceEEE-eeccc----cCCCceEEEEeeceeEEEEe--cCeEEEEecC-Cceee
Q 015220 285 FIEQ-FNEKLLVKQ-ENENLQILDVRNFELTE-VSRTE----FMTPSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVT 354 (411)
Q Consensus 285 FLE~-~~ekllIKQ-e~~~LkI~dL~t~e~~~-v~~T~----f~hpsAfifLy~sqlFlSfs--d~tI~iWn~~-Gel~~ 354 (411)
.|.. ..+++++.. .++.|.+||+.+++... ++-.. ...|..+.+ ...++|++-. +++|.+||+. |+++.
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVD 166 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEE
Confidence 7888 556677777 78999999999998764 32111 126777655 6678899873 8899999999 88888
Q ss_pred eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 355 SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 355 s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++.-. . ..+.+++++||++.++...+.....+....++|.++|..||++.
T Consensus 167 ~i~~g--~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 167 ELTIG--I----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp EEECS--S----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred EEEcC--C----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 77542 1 34689999999998887665433334334589999999999864
No 163
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.01 E-value=1.1e-08 Score=109.06 Aligned_cols=190 Identities=9% Similarity=0.046 Sum_probs=138.7
Q ss_pred EeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-------------ceeEEEEe--CCEEEEEEecCCCceeeEEEE
Q 015220 199 EFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-------------NVQEIKIS--PGIMLLIFTKASGHVPLKILS 263 (411)
Q Consensus 199 EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-------------~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~ 263 (411)
.|. ++|+.|++. .++.+.+||+.+ ..+..+..+ .+..+.+| ||..|++.. .--+.+|+
T Consensus 251 ~~S-pDG~~la~~-~~~~i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~~~i~~~~ 323 (1045)
T 1k32_A 251 HLN-TDGRRILFS-KGGSIYIFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----RGQAFIQD 323 (1045)
T ss_dssp EEE-ESSSCEEEE-ETTEEEEECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----TTEEEEEC
T ss_pred eEc-CCCCEEEEE-eCCEEEEecCCc-eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE----cCEEEEEc
Confidence 555 688888776 588999999954 445577764 58999998 788777776 34688999
Q ss_pred ecCCcEEeEeeeccccCC-cceeeeeecce--eEEeecCceee-EEEcccceEEEeeccccCCCceEEEEeec---eeEE
Q 015220 264 IEDGTVLKSFNHLLHRNK-KVDFIEQFNEK--LLVKQENENLQ-ILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFL 336 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K-~I~FLE~~~ek--llIKQe~~~Lk-I~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFl 336 (411)
+.+|+... +..+.. .+..+..+ ++ ++..++...|. +||+.+++...+ + .|...+..++.+ +.++
T Consensus 324 ~~~~~~~~----~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l--~--~~~~~~~~~~~SpDG~~la 394 (1045)
T 1k32_A 324 VSGTYVLK----VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF--E--ENLGNVFAMGVDRNGKFAV 394 (1045)
T ss_dssp TTSSBEEE----CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC--C--CCCCSEEEEEECTTSSEEE
T ss_pred CCCCceEE----ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEe--c--CCccceeeeEECCCCCEEE
Confidence 99998654 344545 66666666 44 45566677788 889999887764 2 566777777766 4444
Q ss_pred EE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 337 TF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 337 Sf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+. .+++|.+||+. |++...+++|.. .+..+..||||+.|++++.+..........++|.+||+.+|+.
T Consensus 395 ~~~~~~~v~~~d~~tg~~~~~~~~~~~-----~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 395 VANDRFEIMTVDLETGKPTVIERSREA-----MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECSSS-----CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred EECCCCeEEEEECCCCceEEeccCCCC-----CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 44 66799999998 888888888887 6788999999999988877530000112347999999999984
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.01 E-value=9.1e-09 Score=101.18 Aligned_cols=260 Identities=12% Similarity=0.083 Sum_probs=160.8
Q ss_pred eehhhhc-cccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeE-ecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 107 IVFALAQ-SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVY-ASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 107 ii~~L~~-sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~-~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
.|+.... .|....|+..+++..... ..+..-++++.+... .+++++.. ..+. ..+-..++.. ..|+ ..
T Consensus 35 ~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd--~~l~~~~~~~g~~--~~~l~~~~~~--~~g~---~~ 104 (582)
T 3o4h_A 35 KLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG--RVILVRDVSKGAE--QHALFKVNTS--RPGE---EQ 104 (582)
T ss_dssp EEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS--EEEEEEECSTTSC--CEEEEEEETT--STTC---CE
T ss_pred eEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC--eEEEEeccCCCCc--ceEEEEEecc--CCCc---cc
Confidence 3443433 788888887666654433 333357888888853 55554422 1222 1222222220 0111 11
Q ss_pred cceeecccCCCCeEEee-CCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEe-cCCCceeeEE
Q 015220 185 ALFESESLKWPGFVEFD-DVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFT-KASGHVPLKI 261 (411)
Q Consensus 185 ~LF~~~~l~~PgfvEFD-d~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q-~t~~~ipiKI 261 (411)
.|....... ..-|- |.++.++++...++.. +||+.+.++.....+.. .++.+| ||..|+... ...+..-|.+
T Consensus 105 ~l~~~~~~~---~~~~s~dg~~~~~~s~~~~~~~-l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~ 179 (582)
T 3o4h_A 105 RLEAVKPMR---ILSGVDTGEAVVFTGATEDRVA-LYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFT 179 (582)
T ss_dssp ECTTSCSBE---EEEEEECSSCEEEEEECSSCEE-EEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred cccCCCCce---eeeeCCCCCeEEEEecCCCCce-EEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEE
Confidence 121111111 22332 2355677766666666 99999987655444444 889999 999888544 3344456999
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeecceeEEee--cCc--eeeEEEcccceEEEeeccccCCCceE---E-------
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ--ENE--NLQILDVRNFELTEVSRTEFMTPSAF---I------- 327 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ--e~~--~LkI~dL~t~e~~~v~~T~f~hpsAf---i------- 327 (411)
|++.+|+.. . |.++...+..+..++|+-.|.. .+. .|.+||+.+++... . ..|...+ .
T Consensus 180 ~d~~~g~~~-~---l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~-~---~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 180 SNLSSGGLR-V---FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVED-L---ELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp EETTTCCCE-E---ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEEE-C---CCSCSHHHHHCCSEEEEE
T ss_pred EcCCCCCce-E---eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEEE-c---cCCCcChhhhhhccccce
Confidence 999999975 3 5678888899999999875543 333 79999999999873 1 1232222 2
Q ss_pred -EEeeceeEEEE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 328 -FLYENQLFLTF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 328 -fLy~sqlFlSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
|-...+++++. .++++++|+. |++++++.+ .+..+..| ||.++++++.+. ..+.|.+||..
T Consensus 252 ~~spdg~~~~~~~~~g~~~l~~~-g~~~~~~~~--------~v~~~~~s-dg~~l~~~s~~~-------~p~~l~~~d~~ 314 (582)
T 3o4h_A 252 GYLPDGRLAVVARREGRSAVFID-GERVEAPQG--------NHGRVVLW-RGKLVTSHTSLS-------TPPRIVSLPSG 314 (582)
T ss_dssp EECTTSCEEEEEEETTEEEEEET-TEEECCCSS--------EEEEEEEE-TTEEEEEEEETT-------EEEEEEEETTC
T ss_pred eEcCCCcEEEEEEcCCcEEEEEE-CCeeccCCC--------ceEEEEec-CCEEEEEEcCCC-------CCCeEEEEcCC
Confidence 22222677777 8899999999 988764432 45688999 999999999885 12456677655
Q ss_pred c
Q 015220 406 F 406 (411)
Q Consensus 406 t 406 (411)
+
T Consensus 315 ~ 315 (582)
T 3o4h_A 315 E 315 (582)
T ss_dssp C
T ss_pred C
Confidence 3
No 165
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.00 E-value=3.4e-08 Score=98.45 Aligned_cols=274 Identities=12% Similarity=0.038 Sum_probs=165.2
Q ss_pred hccccceeeecccccEEEEEeCCCCc--eEEEEEeecCCCeEEEEEeEecCC----CceeeeEeeehhhhhhCCCCCCCc
Q 015220 112 AQSGVCAAFCRETNQRICFLNVTADE--VIRSLFYNKNNDSLITVSVYASDN----FSSLRCRSTRIEYIRRGKPDAGFA 185 (411)
Q Consensus 112 ~~sG~c~af~~~t~~~ic~lN~s~~e--vIrsifyN~~n~slI~vSv~~sd~----~s~L~cr~~~~~~i~~gk~~~~~~ 185 (411)
...|....+|..||+..-.+...... -|.++-++...+.|.+++...... ...+. +-++..|+. .+
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~-----~~d~~~~~~---~~ 105 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV-----LSKIPHGDP---QS 105 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE-----EEESSSCCC---EE
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE-----EEECCCCce---Ee
Confidence 56788889999999987777654332 378888999888887754321100 01111 122333321 11
Q ss_pred ceeec-ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--Cce------------------eEEEEe-C
Q 015220 186 LFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNV------------------QEIKIS-P 243 (411)
Q Consensus 186 LF~~~-~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~V------------------qeIkIS-d 243 (411)
|-... .-.++..+.| .+||+.|++... +.+.+||+.+.+......+ ..+ ..+..| |
T Consensus 106 l~~~~~~~~~~~~~~~-SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpD 183 (723)
T 1xfd_A 106 LDPPEVSNAKLQYAGW-GPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPD 183 (723)
T ss_dssp CCCTTCCSCCCSBCCB-CSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTT
T ss_pred ccCCccccccccccEE-CCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCC
Confidence 11111 0001223334 468988888776 7899999999887655543 233 689999 8
Q ss_pred CEEEEEEecCC-------------------------------CceeeEEEEecCCcEEeEeee---ccccCCcceeeeee
Q 015220 244 GIMLLIFTKAS-------------------------------GHVPLKILSIEDGTVLKSFNH---LLHRNKKVDFIEQF 289 (411)
Q Consensus 244 G~~Lai~q~t~-------------------------------~~ipiKIl~I~tG~~L~t~~~---LL~h~K~I~FLE~~ 289 (411)
|..|++..... ...-|.+|++.+|+....+.. +.++...+..+..+
T Consensus 184 g~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 184 GTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA 263 (723)
T ss_dssp SSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred CCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEe
Confidence 98888775332 234799999999997555321 11235677788999
Q ss_pred cceeEEee------cCceeeEEEcccceEEEeecc---ccCC--CceEEEEeec-eeEEE-E-ecC------eEEEEe-c
Q 015220 290 NEKLLVKQ------ENENLQILDVRNFELTEVSRT---EFMT--PSAFIFLYEN-QLFLT-F-RNR------TVAVWN-F 348 (411)
Q Consensus 290 ~ekllIKQ------e~~~LkI~dL~t~e~~~v~~T---~f~h--psAfifLy~s-qlFlS-f-sd~------tI~iWn-~ 348 (411)
+|+.+|.. ....|.+||+.+++...+... .+.. +..+.|-... .+++. . .++ .|.+|| .
T Consensus 264 pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~ 343 (723)
T 1xfd_A 264 TSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQ 343 (723)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSS
T ss_pred CCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEecc
Confidence 99876633 336799999999997764211 1111 1233333223 34443 3 555 577777 4
Q ss_pred CCce---eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecc
Q 015220 349 RGEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 349 ~Gel---~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
.|.. .+.+..+.. -....+..||||+.|+..+.++ ..++++||++.+
T Consensus 344 ~~~~~~~~~~l~~~~~----~~~~~~~~spdg~~l~~~~~~~-------~~~~~~l~~~~~ 393 (723)
T 1xfd_A 344 PNSSNDNIQSITSGDW----DVTKILAYDEKGNKIYFLSTED-------LPRRRQLYSANT 393 (723)
T ss_dssp CCSSSCCCCBSCCSSS----CEEEEEEEETTTTEEEEEESSS-------CTTCCEEEEECS
T ss_pred CCCCccceeEeecCCe----EEEeeeEEcCCCCEEEEEEcCC-------CCcceEEEEEeC
Confidence 5444 566664322 1233468999999998766552 235888998864
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.00 E-value=1.1e-07 Score=88.56 Aligned_cols=212 Identities=12% Similarity=0.023 Sum_probs=129.9
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEee-CceEEEEecc---CceeEEEEe-CCEE--EEEEe------cCC----
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISD---KNVQEIKIS-PGIM--LLIFT------KAS---- 254 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~-~Ys~iysLs~---~~VqeIkIS-dG~~--Lai~q------~t~---- 254 (411)
...|.++.|+ ++|+.|.....+ ++.+||+. +.++....+. .....+.+| ||.. +++.+ -.+
T Consensus 39 ~~~~~~~a~s-pdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFD-HERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEEC-TTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEEC-CCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3479999997 467766544445 99999998 8876644331 234557778 7884 33433 010
Q ss_pred CceeeEEEEec-CCcEEeEeeecc-ccCCcceeeeeeccee--EEee-cCceeeEEEcc-cceEEEeeccc----cCCCc
Q 015220 255 GHVPLKILSIE-DGTVLKSFNHLL-HRNKKVDFIEQFNEKL--LVKQ-ENENLQILDVR-NFELTEVSRTE----FMTPS 324 (411)
Q Consensus 255 ~~ipiKIl~I~-tG~~L~t~~~LL-~h~K~I~FLE~~~ekl--lIKQ-e~~~LkI~dL~-t~e~~~v~~T~----f~hps 324 (411)
..-.+.+|++. +|++...+..+- .+...+..+..++++- ++.. +++.|.+||+. +|+...+.... ...|.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 12247999997 688776543211 2446788899999863 4433 56899999999 88876543211 22355
Q ss_pred eEEEEeec-eeEEEE-ecCeEEEEecC---Cceee------eeccccccCC-----CCccceEE-EcCCCCEEEEEecCC
Q 015220 325 AFIFLYEN-QLFLTF-RNRTVAVWNFR---GELVT------SFEDHLLWHP-----DCNTNNIY-ITSDQDLIISYCKAD 387 (411)
Q Consensus 325 AfifLy~s-qlFlSf-sd~tI~iWn~~---Gel~~------s~e~H~~~~~-----~c~~n~i~-Is~Dqd~iiS~~~d~ 387 (411)
.+.|-... .+|++- .+++|.+|+++ |++.. ++..+..-+. .-....+. +||||+.|++.+.+.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 44443222 455555 47899999875 66532 2222110000 00356788 999999987766543
Q ss_pred CCCccccCCceEEEeeec-ceee
Q 015220 388 SDDPLAEGNGKLFVSLLM-FVTC 409 (411)
Q Consensus 388 ~~~~~~~~~gtI~i~~i~-tGk~ 409 (411)
. ....|+|.+|++. +|++
T Consensus 277 ~----~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 277 K----FELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp S----TTSCCEEEEEEECTTSCE
T ss_pred C----CCCCCeEEEEEECCCCCE
Confidence 0 0124699999996 7875
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.99 E-value=2.7e-08 Score=91.79 Aligned_cols=209 Identities=13% Similarity=0.049 Sum_probs=138.9
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCC------------------------CeEEEEEeeCceEEEEeccC---ceeEEEEe
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQD------------------------SIYKVFDLKNYTMLYSISDK---NVQEIKIS 242 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~d------------------------s~ykVWdL~~Ys~iysLs~~---~VqeIkIS 242 (411)
..+..|.-|-|| ++|++++....+ +++.+||..+.+.+...... ....+.++
T Consensus 21 ~~l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCCSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred eecCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 346667778887 568999988877 47999999999988776532 68899999
Q ss_pred -CCEEEEEEecCCCceeeEEEEecCCc-EEeEeeec------cccCCcceeeeeec--ceeEEee--cCceeeEEEcccc
Q 015220 243 -PGIMLLIFTKASGHVPLKILSIEDGT-VLKSFNHL------LHRNKKVDFIEQFN--EKLLVKQ--ENENLQILDVRNF 310 (411)
Q Consensus 243 -dG~~Lai~q~t~~~ipiKIl~I~tG~-~L~t~~~L------L~h~K~I~FLE~~~--ekllIKQ--e~~~LkI~dL~t~ 310 (411)
+|.++ +.+..+.+ |.+|+..... .+.++... -++-..+.-|++.+ +.+++.. .++.|++|| .+|
T Consensus 100 ~~g~l~-v~d~~~~~--v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 100 TDGNYW-VTDVALHQ--VFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp TTSCEE-EEETTTTE--EEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred CCCCEE-EEECCCCE--EEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 88854 44444443 7788864432 55553210 12333566789986 5677777 489999999 566
Q ss_pred eEEE-ee---------ccccCCCceEEEEee-ceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCC
Q 015220 311 ELTE-VS---------RTEFMTPSAFIFLYE-NQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (411)
Q Consensus 311 e~~~-v~---------~T~f~hpsAfifLy~-sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq 377 (411)
+... +. +..+..|..+.+-.. .++|++- .+++|++|+++ |++++++..... .-....+..+| |
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~p-g 251 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF---GRNVFAISYIP-G 251 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT---TTCEEEEEEET-T
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc---CCCcceeeecC-C
Confidence 6655 22 234455766555444 5889998 78899999999 999998854321 11445677788 4
Q ss_pred CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 378 DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 378 d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
-++.+..+.-- ....+++|.+||+.+|+++
T Consensus 252 ~~~~~~g~~~v---~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 252 FLFAVNGKPYF---GDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp EEEEEECCCCT---TCSCCCCEEEEETTTCCEE
T ss_pred EEEEeCCCEEe---ccCCCcEEEEEEcCCCeEE
Confidence 44444322110 0123369999999999875
No 168
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.98 E-value=1.2e-07 Score=92.30 Aligned_cols=210 Identities=14% Similarity=0.115 Sum_probs=147.0
Q ss_pred eeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEe
Q 015220 187 FESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSI 264 (411)
Q Consensus 187 F~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I 264 (411)
+....+.+|-++-|| ++|++++....++.+++||+.+.+....+... ... +.++ +|..|++.+...+. -|.+|+.
T Consensus 125 ~~~a~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~-~I~~~d~ 201 (409)
T 3hrp_A 125 LASAKFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTH-TVYVYMK 201 (409)
T ss_dssp TTTCCCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTC-EEEEEEG
T ss_pred HHHcccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCc-eEEEEEc
Confidence 444578899999999 78999999998999999999987765544433 334 7888 77777777665443 6778888
Q ss_pred cCCcEEeEeeeccc-cCCcceeeeeec--ceeEEeecCceeeEEEcccceEEEeeccc-----cCCCc-eEEEEe-ecee
Q 015220 265 EDGTVLKSFNHLLH-RNKKVDFIEQFN--EKLLVKQENENLQILDVRNFELTEVSRTE-----FMTPS-AFIFLY-ENQL 334 (411)
Q Consensus 265 ~tG~~L~t~~~LL~-h~K~I~FLE~~~--ekllIKQe~~~LkI~dL~t~e~~~v~~T~-----f~hps-AfifLy-~sql 334 (411)
.++.....+..+.. ....+..+.+.+ ..+++...++.|..||+.+++...+.... ...|. ...|-. ...+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 88776555321222 445667788887 45678777788999999988765541111 11233 333333 3578
Q ss_pred EEEE-ecCeEEEEecCCceeeeecccc---ccC-------CCCccceEEEcCCCCEEEEEe-cCCCCCccccCCceEEEe
Q 015220 335 FLTF-RNRTVAVWNFRGELVTSFEDHL---LWH-------PDCNTNNIYITSDQDLIISYC-KADSDDPLAEGNGKLFVS 402 (411)
Q Consensus 335 FlSf-sd~tI~iWn~~Gel~~s~e~H~---~~~-------~~c~~n~i~Is~Dqd~iiS~~-~d~~~~~~~~~~gtI~i~ 402 (411)
|++- .+++|..|+++|. +.++.++. ++. ....-+.+++++||++.|+-+ .. +.|..|
T Consensus 282 yv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~----------~~I~~~ 350 (409)
T 3hrp_A 282 YMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG----------YCLRKL 350 (409)
T ss_dssp EEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT----------CEEEEE
T ss_pred EEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC----------CEEEEE
Confidence 8887 6789999999998 55566654 211 123567899999999998855 44 499999
Q ss_pred eecceeee
Q 015220 403 LLMFVTCK 410 (411)
Q Consensus 403 ~i~tGk~~ 410 (411)
|+.+|++.
T Consensus 351 ~~~~G~v~ 358 (409)
T 3hrp_A 351 DILDGYVS 358 (409)
T ss_dssp ETTTTEEE
T ss_pred ECCCCEEE
Confidence 98888753
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.96 E-value=9.5e-07 Score=83.69 Aligned_cols=269 Identities=9% Similarity=0.100 Sum_probs=152.2
Q ss_pred cccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCce---eeeEeeehhhhhhCCCCCCCccee--
Q 015220 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSS---LRCRSTRIEYIRRGKPDAGFALFE-- 188 (411)
Q Consensus 114 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~---L~cr~~~~~~i~~gk~~~~~~LF~-- 188 (411)
.|....||..|++.+-.+-... .- .+-++...+.+.+++.+.+..... =....+. +..++.-..-++=.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~--~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d---~~t~~~~~~i~~~~~~ 103 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAF--NG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD---ADKLTFEKEISLPPKR 103 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCE--EE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE---TTTCCEEEEEEECTTB
T ss_pred cCeEEEEECCCCeEEEEecCCC--CC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEE---CcCCcEEEEEEcCccc
Confidence 4567788888888877765542 22 677888777777765443221000 0111221 21111100000000
Q ss_pred ecccCCCCeEEeeCCCCeEEEeecC-CCeEEEEEeeCceEEEE-eccCceeEEEEe-CC-EEEEEEecCCCceeeEEEEe
Q 015220 189 SESLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYS-ISDKNVQEIKIS-PG-IMLLIFTKASGHVPLKILSI 264 (411)
Q Consensus 189 ~~~l~~PgfvEFDd~NGkiLt~~~~-ds~ykVWdL~~Ys~iys-Ls~~~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I 264 (411)
...-.+|..+-|+.-..++.+++.. ++++.|||+.+.+.+.+ |....-..+.+. +| ..++...+... +.++++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~---~~~v~~ 180 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGG---LLTINL 180 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSS---EEEEEE
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCc---EEEEEE
Confidence 0012579999997655556666654 78999999999999988 764433223334 22 22222222222 344555
Q ss_pred cC-CcEEeEee--ecc-ccCCcceeeeee--cceeEEeecCceeeEEEcccceEEEeec---------cccCCCce--EE
Q 015220 265 ED-GTVLKSFN--HLL-HRNKKVDFIEQF--NEKLLVKQENENLQILDVRNFELTEVSR---------TEFMTPSA--FI 327 (411)
Q Consensus 265 ~t-G~~L~t~~--~LL-~h~K~I~FLE~~--~ekllIKQe~~~LkI~dL~t~e~~~v~~---------T~f~hpsA--fi 327 (411)
++ |++..... ..+ ....++ ++... +..+++-..+..+.++|+..++...+.. .....|.. .+
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 54 66552211 011 111222 22222 3355555666789999998765332211 00012222 12
Q ss_pred EEe--eceeEEEEe-----------cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccc
Q 015220 328 FLY--ENQLFLTFR-----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (411)
Q Consensus 328 fLy--~sqlFlSfs-----------d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~ 393 (411)
.+. .+.+|++.+ +++|.+||+. ++.+.++..|. ...|++||||++|++.+.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-------p~~ia~spdg~~l~v~n~-------- 324 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-------ALSMTIDQQRNLMLTLDG-------- 324 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-------CCEEEEETTTTEEEEECS--------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-------eeEEEECCCCCEEEEeCC--------
Confidence 222 247788776 3589999999 99999988764 678999999999998763
Q ss_pred cCCceEEEeeecce--eee
Q 015220 394 EGNGKLFVSLLMFV--TCK 410 (411)
Q Consensus 394 ~~~gtI~i~~i~tG--k~~ 410 (411)
|+|.+||..|| |++
T Consensus 325 ---~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 325 ---GNVNVYDISQPEPKLL 340 (361)
T ss_dssp ---SCEEEEECSSSSCEEE
T ss_pred ---CeEEEEECCCCcceee
Confidence 49999999999 764
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.92 E-value=4.9e-09 Score=105.22 Aligned_cols=197 Identities=12% Similarity=0.082 Sum_probs=130.2
Q ss_pred EEeeCCCCeEEEeecC---------CCeEEEEEeeCceEE--EEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEec
Q 015220 198 VEFDDVNGKVLTYSAQ---------DSIYKVFDLKNYTML--YSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~---------ds~ykVWdL~~Ys~i--ysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
+.| -+||+.|++... ++++++||+.+.+.+ ..|+ +.+..++.| ||..||+... -.|++|++.
T Consensus 65 ~~~-SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~~~~~~~~SPDG~~la~~~~----~~i~~~~~~ 138 (719)
T 1z68_A 65 YGL-SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-RPIQYLCWSPVGSKLAYVYQ----NNIYLKQRP 138 (719)
T ss_dssp EEE-CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-SSBCCEEECSSTTCEEEEET----TEEEEESST
T ss_pred EEE-CCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC-cccccceECCCCCEEEEEEC----CeEEEEeCC
Confidence 344 368998888766 689999999998874 4454 578999999 8988887742 279999999
Q ss_pred CCcEEeEeeeccccCCc-----------------ceeeeeecceeEEee--cC---------------------------
Q 015220 266 DGTVLKSFNHLLHRNKK-----------------VDFIEQFNEKLLVKQ--EN--------------------------- 299 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~-----------------I~FLE~~~ekllIKQ--e~--------------------------- 299 (411)
+|+...-+. -++... ...+.-++|+-.|+. .+
T Consensus 139 ~g~~~~l~~--~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 139 GDPPFQITF--NGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TSCCEECCC--CCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCcEEEec--CCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 998754211 122111 136788888754443 21
Q ss_pred -------ceeeEEEcccceE---EEee--ccccCCCceEEEEeec---eeEEEEecC-----eEEEEe----cC-Cceee
Q 015220 300 -------ENLQILDVRNFEL---TEVS--RTEFMTPSAFIFLYEN---QLFLTFRNR-----TVAVWN----FR-GELVT 354 (411)
Q Consensus 300 -------~~LkI~dL~t~e~---~~v~--~T~f~hpsAfifLy~s---qlFlSfsd~-----tI~iWn----~~-Gel~~ 354 (411)
..|.+||+.+++. +.+. .++..|+..+..+..+ +++++..++ .|.+|| .. |+..+
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 1789999999885 2432 2344567666677665 666664332 488899 77 77666
Q ss_pred ee----ccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 355 SF----EDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 355 s~----e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+ ++|..|-..-....+..||||+.|+..+.+. .+...|.+||+.+|+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~------~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDK------DGYKHIHYIKDTVEN 348 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECT------TSCEEEEEESSCSTT
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEEEEEcc------CCceEEEEEECCCCc
Confidence 66 5777742100012678999999776544443 234578888887765
No 171
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.91 E-value=3.8e-07 Score=84.73 Aligned_cols=191 Identities=7% Similarity=0.038 Sum_probs=139.2
Q ss_pred CCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
|--+.+| ++++.+....++.+.|||.++.+.+.+|+ ......+.++ || .|.+.+... --|.+||+.|++++.+
T Consensus 46 ~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~--~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 46 AQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWD--YRIFIINPKTYEITGY 120 (328)
T ss_dssp EEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSC--SEEEEEETTTTEEEEE
T ss_pred ceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCC--CeEEEEECCCCeEEEE
Confidence 4445565 47888888888999999999999999886 4588999996 78 456665433 3578899999999987
Q ss_pred eeecccc----CCcceeeeeecceeEEee--cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEEe-c-----
Q 015220 273 FNHLLHR----NKKVDFIEQFNEKLLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTFR-N----- 340 (411)
Q Consensus 273 ~~~LL~h----~K~I~FLE~~~ekllIKQ--e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSfs-d----- 340 (411)
+. ++. .....-|++.++++++.. .++.|.+||+.+++....- .....|..+.+-...++|++-. +
T Consensus 121 i~--~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i-~~g~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 121 IE--CPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDEL-TIGIQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EE--CTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEE-ECSSCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EE--cCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEE-EcCCCccceEEcCCCCEEEEECCCccCCc
Confidence 54 232 224556777888888886 3789999999999876522 2234566655544447777763 3
Q ss_pred -----CeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 341 -----RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 341 -----~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
++|.+||.. |+++.++.-..+ ...+.++++||++.|..... +|-++|..||++
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g----~~p~~la~~~d~~~lyv~~~------------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLG----DWPSEVQLNGTRDTLYWINN------------DIWRMPVEADRV 256 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTT----CCCEEEEECTTSCEEEEESS------------SEEEEETTCSSC
T ss_pred cccCCceEEEEECCCCeEEEEEecCCC----CCceeEEEecCCCEEEEEcc------------EEEEEECCCCce
Confidence 699999998 888777653222 24678999999999876431 688888888875
No 172
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.87 E-value=6.5e-08 Score=103.21 Aligned_cols=190 Identities=9% Similarity=0.024 Sum_probs=129.0
Q ss_pred eEEeeCCCCeEEEeecCCCeEE-EEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYK-VFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~yk-VWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
.+.|. +|+.|++...+..+. +||+.+.+.. .|.++ .+..+.+| ||..|++.... -.+.+|++++|++...
T Consensus 342 ~~~~s--dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~---~~v~~~d~~tg~~~~~ 415 (1045)
T 1k32_A 342 RRGGD--TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGKPTVI 415 (1045)
T ss_dssp EECSS--SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEEE
T ss_pred eeeEc--CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCC---CeEEEEECCCCceEEe
Confidence 35566 888888888877777 8898876543 44433 79999999 89988877643 3788999999998765
Q ss_pred eeeccccCCcceeeeeecceeEEee--c----------CceeeEEEcccceEEEeeccccCCCceEEEEeec---e-eEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQ--E----------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---Q-LFL 336 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQ--e----------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---q-lFl 336 (411)
+-+|..++..+..++++-.|.. . ...|.+||+.+++... +..|......++.+ + +++
T Consensus 416 ---~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~----l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 416 ---ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA----ATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp ---EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE----CSCSSSBEEEEEECTTSCEEEE
T ss_pred ---ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEE----eeCCCcccCCceEcCCCCEEEE
Confidence 2368888899999999764433 2 1489999999998553 44455555555544 3 333
Q ss_pred EEecCeEEEEecC-Cce-------------------------------------------eeeeccccccCCCCccceEE
Q 015220 337 TFRNRTVAVWNFR-GEL-------------------------------------------VTSFEDHLLWHPDCNTNNIY 372 (411)
Q Consensus 337 Sfsd~tI~iWn~~-Gel-------------------------------------------~~s~e~H~~~~~~c~~n~i~ 372 (411)
+-.++...+|+.. +++ +..+..|.. ....+.
T Consensus 489 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~-----~~~~~~ 563 (1045)
T 1k32_A 489 LSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPG-----DYRMII 563 (1045)
T ss_dssp EESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCB-----CEEEEE
T ss_pred EecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCC-----ChhheE
Confidence 3344555555433 211 122222323 577899
Q ss_pred EcCCCCEEEEEe---------cCCCCCccccCCceEEEeeecceeee
Q 015220 373 ITSDQDLIISYC---------KADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 373 Is~Dqd~iiS~~---------~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+||||+++++.. .+. ...++|.+||+.||+..
T Consensus 564 ~s~dg~~~~~~~~~g~~~~~~~~~------~~~~~l~~~d~~~~~~~ 604 (1045)
T 1k32_A 564 PLESSILIYSVPVHGEFAAYYQGA------PEKGVLLKYDVKTRKVT 604 (1045)
T ss_dssp ECSSEEEEEECCCCCSHHHHHHCC------CCCEEEEEEETTTCCEE
T ss_pred EcCCCeEEEEecccCccccccccc------CCCceEEEEECCCCcEE
Confidence 999999999732 222 23468999999998753
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.84 E-value=2.2e-07 Score=84.67 Aligned_cols=189 Identities=10% Similarity=0.049 Sum_probs=116.7
Q ss_pred CCCCeEEEeecC-CCe--EEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 202 DVNGKVLTYSAQ-DSI--YKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 202 d~NGkiLt~~~~-ds~--ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
-++|+-|++... ++. +.+||+.+.+.......+ .+....+| ||..|++.... --|.+|++.+|+...-+..
T Consensus 44 SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 44 TRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETTTCCEEEEEEC
T ss_pred CCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECCCCcceeeeec
Confidence 478998888877 564 667788888766544433 33356899 88888877743 3688999999997764321
Q ss_pred ccccCCcc---eeeeeecceeEEe------------------------ecCceeeEEEcccceEEEeeccccCCCceEEE
Q 015220 276 LLHRNKKV---DFIEQFNEKLLVK------------------------QENENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (411)
Q Consensus 276 LL~h~K~I---~FLE~~~ekllIK------------------------Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfif 328 (411)
+...+ .++ ..+++-++. +....|.+||+.+++...+.. ++..+..
T Consensus 121 ---~~~~~~~~~~~-~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~----~~~~~~~ 192 (388)
T 3pe7_A 121 ---PAEWVGYGTWV-ANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ----ENQWLGH 192 (388)
T ss_dssp ---CTTEEEEEEEE-ECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE----ESSCEEE
T ss_pred ---hhhccccccee-ECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec----CCccccc
Confidence 11111 111 234443332 244789999999999887532 3333333
Q ss_pred Eeec-----eeEEEEe------cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCc
Q 015220 329 LYEN-----QLFLTFR------NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNG 397 (411)
Q Consensus 329 Ly~s-----qlFlSfs------d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~g 397 (411)
+..+ .+.++-. ...|-+|++.|..++.+..|.. ...+.....||||+.|+..+.... ...+
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~---~~~~~~~~~spdg~~l~~~~~~~~-----~~~~ 264 (388)
T 3pe7_A 193 PIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE---GESCTHEFWVPDGSALVYVSYLKG-----SPDR 264 (388)
T ss_dssp EEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT---TEEEEEEEECTTSSCEEEEEEETT-----CCCE
T ss_pred cEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC---CcccccceECCCCCEEEEEecCCC-----CCcc
Confidence 3322 2322222 2367777877766666665542 113557889999997765554430 1225
Q ss_pred eEEEeeecceee
Q 015220 398 KLFVSLLMFVTC 409 (411)
Q Consensus 398 tI~i~~i~tGk~ 409 (411)
+|.+||+.||+.
T Consensus 265 ~l~~~d~~~g~~ 276 (388)
T 3pe7_A 265 FIYSADPETLEN 276 (388)
T ss_dssp EEEEECTTTCCE
T ss_pred eEEEEecCCCce
Confidence 799999999984
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.84 E-value=6.8e-07 Score=91.09 Aligned_cols=243 Identities=9% Similarity=0.064 Sum_probs=148.2
Q ss_pred eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCC--CeEEeeCCCCeEEEeecCCC
Q 015220 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWP--GFVEFDDVNGKVLTYSAQDS 215 (411)
Q Consensus 138 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~P--gfvEFDd~NGkiLt~~~~ds 215 (411)
.+.++-++...+.|.+++.....+-..+ +.. ++.-|+.- ....+.+- .-+.|- ++|+.|+|...+.
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i--~v~---dl~tg~~~------~~~~~~~~~~~~~~ws-pDg~~l~~~~~d~ 189 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVL--HVI---DVDSGEWS------KVDVIEGGKYATPKWT-PDSKGFYYEWLPT 189 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEE--EEE---ETTTCCBC------SSCCBSCCTTCCCEEC-TTSSEEEEEECCC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEE--EEE---ECCCCCCc------CCcccCcccccceEEe-cCCCEEEEEEecC
Confidence 5777777777666666554433221222 333 33333321 01111111 233443 5889999988877
Q ss_pred e-------------EEEEEeeCce----EEEEeccC--ceeEEEEe-CCEEEEEEecCC-CceeeEEEEecCCcEEeEee
Q 015220 216 I-------------YKVFDLKNYT----MLYSISDK--NVQEIKIS-PGIMLLIFTKAS-GHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 216 ~-------------ykVWdL~~Ys----~iysLs~~--~VqeIkIS-dG~~Lai~q~t~-~~ipiKIl~I~tG~~L~t~~ 274 (411)
. +++|++.+.+ ++++..++ .+..+.+| ||..|++....+ ...-|.+|+..+|+...
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~--- 266 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRL--- 266 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEE---
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEE---
Confidence 6 9999998865 77777665 68899999 898888877665 67777888887776432
Q ss_pred eccccCC-cceeeeeecceeEEeec----CceeeEEEcccceE---EEe-eccccCCCceEEEEeeceeEEEE-ecCeEE
Q 015220 275 HLLHRNK-KVDFIEQFNEKLLVKQE----NENLQILDVRNFEL---TEV-SRTEFMTPSAFIFLYENQLFLTF-RNRTVA 344 (411)
Q Consensus 275 ~LL~h~K-~I~FLE~~~ekllIKQe----~~~LkI~dL~t~e~---~~v-~~T~f~hpsAfifLy~sqlFlSf-sd~tI~ 344 (411)
+..+.. ....+. ..+++++.+. +.+|.+||+.+++. ..+ +......-+.+.+ ...+++++. .|++.+
T Consensus 267 -l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~-~~~~lv~~~~~dg~~~ 343 (695)
T 2bkl_A 267 -LVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI-VGGHLSLEYLKDATSE 343 (695)
T ss_dssp -EEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE-ETTEEEEEEEETTEEE
T ss_pred -eecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE-ECCEEEEEEEECCEEE
Confidence 333333 333333 4444666554 57899999988763 332 1110000122222 245788877 788888
Q ss_pred EEecC--CceeeeeccccccCCCCccceEEEcCCCCEEE-EEecCCCCCccccCCceEEEeeecceee
Q 015220 345 VWNFR--GELVTSFEDHLLWHPDCNTNNIYITSDQDLII-SYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 345 iWn~~--Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii-S~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
||.++ |..++.+..|. ...+..+..++|++.++ +++... .-++|.+||+.||+.
T Consensus 344 l~~~~~~g~~~~~l~~~~----~~~v~~~~~s~d~~~l~~~~ss~~-------~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 344 VRVATLKGKPVRTVQLPG----VGAASNLMGLEDLDDAYYVFTSFT-------TPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEETTCCEEEECCCSS----SSEECCCBSCTTCSEEEEEEEETT-------EEEEEEEEETTTCCE
T ss_pred EEEEeCCCCeeEEecCCC----CeEEEEeecCCCCCEEEEEEcCCC-------CCCEEEEEECCCCcE
Confidence 88665 87777766441 23667778889997555 554432 226999999999975
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.82 E-value=7.9e-08 Score=95.30 Aligned_cols=200 Identities=13% Similarity=0.043 Sum_probs=126.4
Q ss_pred CeEEeeCCCCeEEEeecCC----------CeEEEEEeeC------ceEEEEec-c--CceeEEEEe-CCEEEEEEecCC-
Q 015220 196 GFVEFDDVNGKVLTYSAQD----------SIYKVFDLKN------YTMLYSIS-D--KNVQEIKIS-PGIMLLIFTKAS- 254 (411)
Q Consensus 196 gfvEFDd~NGkiLt~~~~d----------s~ykVWdL~~------Ys~iysLs-~--~~VqeIkIS-dG~~Lai~q~t~- 254 (411)
..+.|. +||+.|++...+ ..+.+||+.+ .+. ..|+ . ..+..+.+| ||..|++....+
T Consensus 133 ~~~~~s-pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~ 210 (662)
T 3azo_A 133 ADPVLL-PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210 (662)
T ss_dssp EEEEEE-TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTT
T ss_pred cCcEEC-CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCC
Confidence 344554 688888877766 6899999988 543 4555 3 378889999 998888776555
Q ss_pred ----CceeeEEEEec-CCcEEeEeeeccccCCcceeeeeecceeE-Ee-ecCc--eeeEEEcccceEEEeeccc--cCCC
Q 015220 255 ----GHVPLKILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEKLL-VK-QENE--NLQILDVRNFELTEVSRTE--FMTP 323 (411)
Q Consensus 255 ----~~ipiKIl~I~-tG~~L~t~~~LL~h~K~I~FLE~~~ekll-IK-Qe~~--~LkI~dL~t~e~~~v~~T~--f~hp 323 (411)
...-|.+|++. +|+......+.-++...+..+.-++|+.+ +. ..+. +|.+||+.+++...+.... +..|
T Consensus 211 ~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 211 RMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGP 290 (662)
T ss_dssp CCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCC
T ss_pred CCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCc
Confidence 34579999999 68321111112234677788888877643 33 3344 7888888888887653221 1122
Q ss_pred ------ceEEEEeeceeEEEEecCeEEEE--ecCCceeeeeccccccCCCCccceEEEcCCCCEE-EEEecCCCCCcccc
Q 015220 324 ------SAFIFLYENQLFLTFRNRTVAVW--NFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAE 394 (411)
Q Consensus 324 ------sAfifLy~sqlFlSfsd~tI~iW--n~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~ 394 (411)
..+.|....+++++.+.++++|| |+.|..++.+..|.. .+..+. ++|++.+ ++++.+.
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~-----~~~~~~-s~~~~~~~~~~~~~~------- 357 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGPWT-----EWAATL-TVSGTRAVGVAASPR------- 357 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSSCC-----EEEEEE-EEETTEEEEEEEETT-------
T ss_pred cccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCCCC-----eEEEEE-ecCCCEEEEEEcCCC-------
Confidence 23344445577777733999999 666555788888865 455553 6666643 3333332
Q ss_pred CCceEEEeeecceeee
Q 015220 395 GNGKLFVSLLMFVTCK 410 (411)
Q Consensus 395 ~~gtI~i~~i~tGk~~ 410 (411)
...+|-++|+.+|++.
T Consensus 358 ~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 358 TAYEVVELDTVTGRAR 373 (662)
T ss_dssp EEEEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCceE
Confidence 2346666677788753
No 176
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.79 E-value=1.2e-06 Score=78.81 Aligned_cols=203 Identities=10% Similarity=0.063 Sum_probs=128.6
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEe--ccCceeEEEEe-CCEEEEEEecC-CCceeeEEEEecCCc
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSI--SDKNVQEIKIS-PGIMLLIFTKA-SGHVPLKILSIEDGT 268 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysL--s~~~VqeIkIS-dG~~Lai~q~t-~~~ipiKIl~I~tG~ 268 (411)
.+|.-+-|| ++|++++....++.+.+||..+.+..... ....+..+.++ +|.+++..... ....-|.+|+..+++
T Consensus 45 ~~~~~~~~~-~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 45 LQLEGLNFD-RQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred ccccCcEEC-CCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 456667777 78998888888899999999987755433 35689999998 88765554322 112357889999988
Q ss_pred EEeEeeeccccCCcceeeeeeccee-EEeec-------CceeeEEEcccceEEEeeccccCCCceEEEEeec-eeEEEE-
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNEKL-LVKQE-------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTF- 338 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~ekl-lIKQe-------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-qlFlSf- 338 (411)
....+. ...+...+.-+...+++. ++... ...|-.||..+++...+.. .+..|..+.+-... .+|++-
T Consensus 124 ~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 124 LQDIIE-DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ-NISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp CEEEEC-SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-EESSEEEEEECTTSSEEEEEEG
T ss_pred EEEEEc-cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-CCCcccceEECCCCCEEEEEeC
Confidence 653321 113445677788887765 44433 2467777777666665432 22334333222222 366766
Q ss_pred ecCeEEEEecC--Cceeeeecccccc--CCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 339 RNRTVAVWNFR--GELVTSFEDHLLW--HPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 339 sd~tI~iWn~~--Gel~~s~e~H~~~--~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.++.|.+|+++ |..++.+...... ...-..+.+++++||.+.++...+. .|.+||. +|+.
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~----------~v~~~d~-~g~~ 265 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG----------RVLVFNK-RGYP 265 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT----------EEEEECT-TSCE
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC----------EEEEECC-CCCE
Confidence 57899999994 6655443221110 0112457799999999999876654 8888887 4553
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.76 E-value=2.2e-07 Score=92.15 Aligned_cols=189 Identities=7% Similarity=-0.047 Sum_probs=122.7
Q ss_pred CCCCeE-EEeecCCCeEEEEEeeCc----eEEEEecc-------CceeEEEEe-CCEEEEEEecC-------CCceeeEE
Q 015220 202 DVNGKV-LTYSAQDSIYKVFDLKNY----TMLYSISD-------KNVQEIKIS-PGIMLLIFTKA-------SGHVPLKI 261 (411)
Q Consensus 202 d~NGki-Lt~~~~ds~ykVWdL~~Y----s~iysLs~-------~~VqeIkIS-dG~~Lai~q~t-------~~~ipiKI 261 (411)
-+||+. |++...+ ..+||.+..- .....|+. ..+..+.+| ||..|+..... ....-|.+
T Consensus 87 SPDg~~~la~~~~~-~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFG-DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTT-TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECC-CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 378888 7776553 5566666543 55677776 268889999 88877776654 45578999
Q ss_pred EEecC------CcEEeEeeecc-ccCCcceeeeeecceeEE--eecC--------ceeeEEEcc-cc---eEEEeecccc
Q 015220 262 LSIED------GTVLKSFNHLL-HRNKKVDFIEQFNEKLLV--KQEN--------ENLQILDVR-NF---ELTEVSRTEF 320 (411)
Q Consensus 262 l~I~t------G~~L~t~~~LL-~h~K~I~FLE~~~ekllI--KQe~--------~~LkI~dL~-t~---e~~~v~~T~f 320 (411)
|++.+ |++. . +. .+...+..+..++|+-.| .+.+ ..|.+||+. +| +...+..
T Consensus 166 ~~~~~~~~~~~~~~~-~---l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~--- 238 (662)
T 3azo_A 166 VPLDGSAAADRSAVR-E---LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG--- 238 (662)
T ss_dssp EETTSTTTTCGGGSE-E---SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE---
T ss_pred EECCCCccccCCcee-E---EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC---
Confidence 99999 6653 3 44 445667778899988533 3422 479999999 67 5555422
Q ss_pred CCCceEEEEeec---eeEEEE-ecC--eEEEEecC-Cceeeeecccccc-CCCCc--cceEEEcCCCCEEEEEecCCCCC
Q 015220 321 MTPSAFIFLYEN---QLFLTF-RNR--TVAVWNFR-GELVTSFEDHLLW-HPDCN--TNNIYITSDQDLIISYCKADSDD 390 (411)
Q Consensus 321 ~hpsAfifLy~s---qlFlSf-sd~--tI~iWn~~-Gel~~s~e~H~~~-~~~c~--~n~i~Is~Dqd~iiS~~~d~~~~ 390 (411)
.+...+..+..+ +++++. .++ .|-+||+. |++.+-...|... .|... ...+..++|+.++++++. .
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~--- 314 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G--- 314 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S---
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C---
Confidence 233444444443 565555 566 56666665 6655444443322 23222 467999999999999876 5
Q ss_pred ccccCCceEEEe--eecceee
Q 015220 391 PLAEGNGKLFVS--LLMFVTC 409 (411)
Q Consensus 391 ~~~~~~gtI~i~--~i~tGk~ 409 (411)
+++|| |+.+|+.
T Consensus 315 -------~~~l~~~d~~~~~~ 328 (662)
T 3azo_A 315 -------AAVLGILDPESGEL 328 (662)
T ss_dssp -------SCEEEEEETTTTEE
T ss_pred -------ccEEEEEECCCCcE
Confidence 77888 6666653
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.76 E-value=8.6e-07 Score=80.80 Aligned_cols=197 Identities=13% Similarity=0.081 Sum_probs=121.2
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceE--EEEeccCceeEE--EEe-CCEEEEEEec-------------------CCCce
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISDKNVQEI--KIS-PGIMLLIFTK-------------------ASGHV 257 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs~~~VqeI--kIS-dG~~Lai~q~-------------------t~~~i 257 (411)
.++|+.|++...+..+.+||+.+.+. ++......+... ..+ ||.+++.... .....
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 89 SPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 57899999999999999999999874 455555444333 335 8887775442 23446
Q ss_pred eeEEEEecCCcEEeEeeeccccCCcceeeeeec-ceeEE--eec------CceeeEEEcccceEEEeeccccCCCceEEE
Q 015220 258 PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN-EKLLV--KQE------NENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (411)
Q Consensus 258 piKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~-ekllI--KQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfif 328 (411)
-|.+|++.+|+... +..+...+..+..++ ++-.| ..+ ...|.++|+.+++...+.. ......+..
T Consensus 169 ~l~~~d~~~g~~~~----l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~ 242 (388)
T 3pe7_A 169 RLMRVDLKTGESTV----ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT--HAEGESCTH 242 (388)
T ss_dssp EEEEEETTTCCEEE----EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC--CCTTEEEEE
T ss_pred eEEEEECCCCceEE----eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee--CCCCccccc
Confidence 78999999998654 345556678888998 66432 333 3378888888887776422 111133444
Q ss_pred Eeec----ee-EEEEecC----eEEEEecC-Cc--eeeeeccc--cccCCCCccceEEEcCCCCEEEEEecCCCCCcccc
Q 015220 329 LYEN----QL-FLTFRNR----TVAVWNFR-GE--LVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (411)
Q Consensus 329 Ly~s----ql-FlSfsd~----tI~iWn~~-Ge--l~~s~e~H--~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~ 394 (411)
+..+ .+ |++..++ .|.+||+. |+ +++.+.++ ..+. ...+.+||||+.|+....+.. .-...
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~-~~~~~ 317 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSN----YDGSLMVGDGSDAPVDVQDDS-GYKIE 317 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEEC----TTSSEEEEEECCC-------------C
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeec----CCCCeEccCCCcceeEeeecc-ccccC
Confidence 4544 34 4444433 39999999 66 45566652 2221 223468999998776543310 00012
Q ss_pred CCceEEEeeecceee
Q 015220 395 GNGKLFVSLLMFVTC 409 (411)
Q Consensus 395 ~~gtI~i~~i~tGk~ 409 (411)
+.+.|.+||+.+|++
T Consensus 318 ~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 318 NDPFLYVFNMKNGTQ 332 (388)
T ss_dssp CCCEEEEEETTTTEE
T ss_pred CCCEEEEEeccCCce
Confidence 346899999999986
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.70 E-value=2.8e-06 Score=76.43 Aligned_cols=182 Identities=11% Similarity=0.124 Sum_probs=113.7
Q ss_pred EEeeCCCCeEEEeecCC---C--eEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecC------------------
Q 015220 198 VEFDDVNGKVLTYSAQD---S--IYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKA------------------ 253 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~d---s--~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t------------------ 253 (411)
+.| -++|+-|++...+ + .+.+||+.+.+.........+..+..| ||..|++....
T Consensus 64 ~~~-SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 142 (347)
T 2gop_A 64 PRI-SPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFD 142 (347)
T ss_dssp EEE-CTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCCC--
T ss_pred eEE-CCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccceeec
Confidence 444 3678877776543 2 366778888765443333349999999 88777776532
Q ss_pred ------CCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-cC------c-eeeEEEcccceEEEeeccc
Q 015220 254 ------SGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-EN------E-NLQILDVRNFELTEVSRTE 319 (411)
Q Consensus 254 ------~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ-e~------~-~LkI~dL~t~e~~~v~~T~ 319 (411)
....-|.+|++.+|+.+..+. . . .+..+..+++++++.. .+ . ..+||.+.+++...+...
T Consensus 143 g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~- 216 (347)
T 2gop_A 143 DLGFFDGEKTTFWIFDTESEEVIEEFE---K-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK- 216 (347)
T ss_dssp -------CEEEEEEEETTTTEEEEEEE---E-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-
T ss_pred CcccccCccceEEEEECCCCeEEeeec---C-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEEeccC-
Confidence 114568899999999866533 2 2 6777888999854443 11 1 334554448877765432
Q ss_pred cCCCceEEEEeec--eeEEEEec--------CeEEEEecCCceeeeeccccccCCCCccce-EEEcCCCCEEEEEecCCC
Q 015220 320 FMTPSAFIFLYEN--QLFLTFRN--------RTVAVWNFRGELVTSFEDHLLWHPDCNTNN-IYITSDQDLIISYCKADS 388 (411)
Q Consensus 320 f~hpsAfifLy~s--qlFlSfsd--------~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~-i~Is~Dqd~iiS~~~d~~ 388 (411)
..+..+.-. .+++...+ ..|.+|+ .|+..+-..+|.. .+.. +..+ || ++++++.+.
T Consensus 217 ----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~-----~~~~~~~~s-dg-~~~~~~~~~- 283 (347)
T 2gop_A 217 ----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDR-----GVGQAKIKD-GK-VYFTLFEEG- 283 (347)
T ss_dssp ----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCS-----EEEEEEEET-TE-EEEEEEETT-
T ss_pred ----cceeeECCCCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCc-----ccCCccEEc-Cc-EEEEEecCC-
Confidence 122222211 34343322 3677888 7776655555544 4554 7888 99 999988876
Q ss_pred CCccccCCceEEEeeecceee
Q 015220 389 DDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 389 ~~~~~~~~gtI~i~~i~tGk~ 409 (411)
++.|| +.+|++
T Consensus 284 ---------~~~l~-~~~g~~ 294 (347)
T 2gop_A 284 ---------SVNLY-IWDGEI 294 (347)
T ss_dssp ---------EEEEE-EESSSE
T ss_pred ---------cEEEE-EcCCce
Confidence 89999 877764
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.69 E-value=2.7e-06 Score=73.85 Aligned_cols=195 Identities=11% Similarity=0.077 Sum_probs=128.9
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEE-ecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCC
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-ISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDG 267 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iys-Ls~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG 267 (411)
.+..|--+.||. +|++.+... ++.+.+||..+...... ... ..+..+.++ +|.+++ .....+ -|.+|+..++
T Consensus 65 ~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v-~~~~~~--~i~~~~~~~~ 139 (270)
T 1rwi_B 65 GLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYV-ADRGNN--RVVKLAAGSK 139 (270)
T ss_dssp SCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEE-EEGGGT--EEEEECTTCC
T ss_pred CcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEE-EECCCC--EEEEEECCCc
Confidence 345788899976 788888777 88899999877553321 122 478899998 777444 433333 2445554444
Q ss_pred cEEeEeeeccccCCcceeeeeec-ceeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ecCeEE
Q 015220 268 TVLKSFNHLLHRNKKVDFIEQFN-EKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RNRTVA 344 (411)
Q Consensus 268 ~~L~t~~~LL~h~K~I~FLE~~~-ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd~tI~ 344 (411)
+.... .......+.-|.+.+ +++++.. .++.|.+||..++.......+.+..|..+.+-....+|++- .++.|.
T Consensus 140 ~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~ 216 (270)
T 1rwi_B 140 TQTVL---PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVV 216 (270)
T ss_dssp SCEEC---CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEE
T ss_pred eeEee---ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEE
Confidence 33221 122334566688876 4566665 46799999999887766443444455544332233788887 578999
Q ss_pred EEecCCceeeeec-cccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 345 VWNFRGELVTSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 345 iWn~~Gel~~s~e-~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+|+..|.....+. .+.. ....+++++||.+.++.+.+. +|.++++...+
T Consensus 217 ~~~~~~~~~~~~~~~~~~-----~p~~i~~~~~g~l~v~~~~~~----------~v~~~~~~~~~ 266 (270)
T 1rwi_B 217 KLLAGSTTSTVLPFTGLN-----TPLAVAVDSDRTVYVADRGND----------RVVKLTSLEHH 266 (270)
T ss_dssp EECTTCSCCEECCCCSCS-----CEEEEEECTTCCEEEEEGGGT----------EEEEECCCGGG
T ss_pred EEcCCCCcceeeccCCCC-----CceeEEECCCCCEEEEECCCC----------EEEEEcCCCcc
Confidence 9999987655433 2322 567899999999999988776 99999887654
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.69 E-value=1.7e-05 Score=80.83 Aligned_cols=244 Identities=13% Similarity=0.121 Sum_probs=146.0
Q ss_pred eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcc-eeecccCCCCeEEeeCCCCeEEEeecCCCe
Q 015220 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFAL-FESESLKWPGFVEFDDVNGKVLTYSAQDSI 216 (411)
Q Consensus 138 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~L-F~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ 216 (411)
.+.++-+......|.+.+.....+-..| +.. ++.-|+. .++ ..... .+-+.|- ++|+.|.|...+..
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i--~v~---d~~tg~~---~~~~~~~~~---~~~~~ws-pDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTI--KFM---KVDGAKE---LPDVLERVK---FSCMAWT-HDGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEE--EEE---ETTTTEE---EEEEEEEEC---SCCEEEC-TTSSEEEEEECCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEE--EEE---ECCCCCC---CcccccCcc---cceEEEE-eCCCEEEEEEECCc
Confidence 5667777776666666554433221222 222 2222221 011 11111 2334443 58888888877665
Q ss_pred ----------------EEEEEeeCce----EEEEeccC--ceeEEEEe-CCEEEEEEecCCC--ceeeEEEEecC-----
Q 015220 217 ----------------YKVFDLKNYT----MLYSISDK--NVQEIKIS-PGIMLLIFTKASG--HVPLKILSIED----- 266 (411)
Q Consensus 217 ----------------ykVWdL~~Ys----~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~--~ipiKIl~I~t----- 266 (411)
+.+|++.+.+ ++++-.++ .+..+.+| ||..|++...... ..-|.+|++.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc
Confidence 8899998865 66666543 47789999 8988887765332 56788999998
Q ss_pred -Cc-EEeEeeeccccCCcce-eeeeecceeEEeec----CceeeEEEcccceE---EE-eeccccCCCceEEEEeeceeE
Q 015220 267 -GT-VLKSFNHLLHRNKKVD-FIEQFNEKLLVKQE----NENLQILDVRNFEL---TE-VSRTEFMTPSAFIFLYENQLF 335 (411)
Q Consensus 267 -G~-~L~t~~~LL~h~K~I~-FLE~~~ekllIKQe----~~~LkI~dL~t~e~---~~-v~~T~f~hpsAfifLy~sqlF 335 (411)
|+ .+.. +..+...+. .+..-++.+++... +.+|.+||+.+++. .. ++......-+.+.+.....++
T Consensus 274 ~~~~~~~~---l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 274 TGILKWVK---LIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp CSSCCCEE---EECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred CCccceEE---eeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 64 3444 344444333 33344566777664 33699999998752 22 211111011122222244777
Q ss_pred EEE-ecC--eEEEEec-CCceeeeeccccccCCCCccceEEEcCCCCE-EEEEecCCCCCccccCCceEEEeeeccee
Q 015220 336 LTF-RNR--TVAVWNF-RGELVTSFEDHLLWHPDCNTNNIYITSDQDL-IISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 336 lSf-sd~--tI~iWn~-~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~-iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
++. .++ .|.+|++ .|..++.+..|.. .+..+..+||++. .++++... .-++|-.||+.||+
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~-----~v~~~~~s~d~~~l~~~~ss~~-------~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVG-----SVVGYSGQKKDTEIFYQFTSFL-------SPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSS-----EEEEEECCTTCSEEEEEEECSS-------CCCEEEEEETTSSS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCc-----eEEEEecCCCCCEEEEEEeCCC-------CCCEEEEEECCCCc
Confidence 777 565 4667788 5988888887755 6778889999965 45555543 22699999999988
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.68 E-value=4.2e-07 Score=93.35 Aligned_cols=141 Identities=9% Similarity=0.003 Sum_probs=97.0
Q ss_pred eeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCc---cee--eeeecceeEE--eecC--------
Q 015220 236 VQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKK---VDF--IEQFNEKLLV--KQEN-------- 299 (411)
Q Consensus 236 VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~---I~F--LE~~~ekllI--KQe~-------- 299 (411)
...++.| ||.+|+.. . --|++|++.||+.... +-+|+.. +.+ ...++|+..| .++.
T Consensus 19 ~~~~~w~~dg~~~~~~---~--~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ---E--NNILVFNAEYGNSSVF---LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCEEECSSSEEEEEE---T--TEEEEEETTTCCEEEE---ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ccccEECCCCcEEEEc---C--CcEEEEECCCCceEEE---EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 4467777 88888775 2 2689999999998655 3344322 344 6778887644 4443
Q ss_pred -ceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEecCeEEEEecC-Cceee-eeccccccCCC--------
Q 015220 300 -ENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFRNRTVAVWNFR-GELVT-SFEDHLLWHPD-------- 365 (411)
Q Consensus 300 -~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfsd~tI~iWn~~-Gel~~-s~e~H~~~~~~-------- 365 (411)
..+.+||+.+++... +..|+........| +.++..+++.|.+|+.. |+..+ |+.++..+..+
T Consensus 91 ~~~~~~~d~~~~~~~~----l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 91 TASYDIYDLNKRQLIT----EERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEEEETTTTEECC----SSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred ceEEEEEECCCCcEEE----cccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 356699999999764 44567777777777 44444499999999998 66554 56666432100
Q ss_pred ----CccceEEEcCCCCEEEEEecCCC
Q 015220 366 ----CNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 366 ----c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
-....+..||||+.|++++.|+.
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~ 193 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDT 193 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred chhcCCCcceEECCCCCEEEEEEEccc
Confidence 12346889999999999987765
No 183
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.63 E-value=0.00017 Score=62.65 Aligned_cols=272 Identities=10% Similarity=0.055 Sum_probs=160.2
Q ss_pred cceEEEeec-cceehhhhc-cccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 96 SKIIEIVAA-RDIVFALAQ-SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 96 S~V~EIv~a-~dii~~L~~-sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
+.+..|... +.-+.+-.. .|.-..||.. ++..-+..+.....+++|...+... +.+ +... + ..+. ..+.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v-~~~~-~--~~i~--~~~~- 85 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWF-TENA-A--NKIG--RITK- 85 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEE-EETT-T--TEEE--EECT-
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEE-eCCC-C--CeEE--EECC-
Confidence 344555544 223333333 4666778877 7766655555567788999887544 333 2211 1 1111 1110
Q ss_pred hhhhCCCCCCCccee-ecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEec--cCceeEEEEe-CCEEEE
Q 015220 174 YIRRGKPDAGFALFE-SESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--DKNVQEIKIS-PGIMLL 248 (411)
Q Consensus 174 ~i~~gk~~~~~~LF~-~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs--~~~VqeIkIS-dG~~La 248 (411)
.|+. ..|. ......|--+.+| ++|++.+....++.+.+||. +.+.. +.+. ...+..+.++ +|.+++
T Consensus 86 ---~g~~----~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 86 ---KGII----KEYTLPNPDSAPYGITEG-PNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWF 156 (299)
T ss_dssp ---TSCE----EEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEE
T ss_pred ---CCcE----EEEeCCCcCCCceeeEEC-CCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEE
Confidence 0111 1111 1134567788888 58899988877888999998 44433 3443 2478888888 776555
Q ss_pred EEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecc-eeEEee-cCceeeEEEcccceEEEeecc-ccCCCce
Q 015220 249 IFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNE-KLLVKQ-ENENLQILDVRNFELTEVSRT-EFMTPSA 325 (411)
Q Consensus 249 i~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~e-kllIKQ-e~~~LkI~dL~t~e~~~v~~T-~f~hpsA 325 (411)
... ..+ -|.+|+. +|+...- . +-.....+.-|.+.++ .+++.. .++.|.+||. +++...+... ....|.+
T Consensus 157 ~~~-~~~--~i~~~~~-~g~~~~~-~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 229 (299)
T 2z2n_A 157 TEN-QNN--AIGRITE-SGDITEF-K-IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHA 229 (299)
T ss_dssp EET-TTT--EEEEECT-TCCEEEE-E-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred EeC-CCC--EEEEEcC-CCcEEEe-e-CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCcee
Confidence 433 222 3667888 8877642 1 1123345666777765 456665 4788999999 8876654221 2233433
Q ss_pred EEEEeeceeEEEE-ecCeEEEEecCCceee-eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 326 FIFLYENQLFLTF-RNRTVAVWNFRGELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 326 fifLy~sqlFlSf-sd~tI~iWn~~Gel~~-s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
+.+-...++|++- .++.|..|++.|++.. .+.++.. ....+++ +||.+.++.+. . .|..+|
T Consensus 230 i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~-----~~~~i~~-~~g~l~v~~~~-~----------~l~~~~ 292 (299)
T 2z2n_A 230 ITAGAGIDLWFTEWGANKIGRLTSNNIIEEYPIQIKSA-----EPHGICF-DGETIWFAMEC-D----------KIGKLT 292 (299)
T ss_dssp EEECSTTCEEEEETTTTEEEEEETTTEEEEEECSSSSC-----CEEEEEE-CSSCEEEEETT-T----------EEEEEE
T ss_pred EEECCCCCEEEeccCCceEEEECCCCceEEEeCCCCCC-----ccceEEe-cCCCEEEEecC-C----------cEEEEE
Confidence 3332233788887 6789999999886543 2334433 6788888 99999998753 3 788888
Q ss_pred ecceee
Q 015220 404 LMFVTC 409 (411)
Q Consensus 404 i~tGk~ 409 (411)
..++++
T Consensus 293 ~~~~~~ 298 (299)
T 2z2n_A 293 LIKDNM 298 (299)
T ss_dssp EC----
T ss_pred cCcccC
Confidence 888875
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.62 E-value=5.5e-06 Score=85.38 Aligned_cols=186 Identities=12% Similarity=0.117 Sum_probs=134.6
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCceeeEEEEec--CCcEEeEeeeccc
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE--DGTVLKSFNHLLH 278 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~--tG~~L~t~~~LL~ 278 (411)
+.+..++....++++-|||..+.+.+.+|. +..+..+.+| ||-+|.+.... -.|.+||+. |++++.++. .|
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d---g~V~viD~~~~t~~~v~~i~--~G 239 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD---GKVNMIDLWMKEPTTVAEIK--IG 239 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCCEEEEEE--CC
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCC---CeEEEEECCCCCCcEeEEEe--cC
Confidence 578899999999999999999999998886 5588899999 89988887643 369999995 999988743 23
Q ss_pred cCCcceeeeee----cc--eeEEeec-CceeeEEEcccceEEEeeccc-------cCCCc-eEEEEeec----eeEEEE-
Q 015220 279 RNKKVDFIEQF----NE--KLLVKQE-NENLQILDVRNFELTEVSRTE-------FMTPS-AFIFLYEN----QLFLTF- 338 (411)
Q Consensus 279 h~K~I~FLE~~----~e--kllIKQe-~~~LkI~dL~t~e~~~v~~T~-------f~hps-AfifLy~s----qlFlSf- 338 (411)
....-++++ +| ++++..+ ++.+.|+|..+.+....-.+. -.||+ .+..++.+ ..+++.
T Consensus 240 --~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 240 --SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred --CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 234668888 24 3566664 589999999999988733332 12455 34444433 445566
Q ss_pred ecCeEEEEecC-Cc-eee-eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 339 RNRTVAVWNFR-GE-LVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 339 sd~tI~iWn~~-Ge-l~~-s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+++|.++|.. .+ +.. +.+ ... ....+.++|||+.++..+... ++|-++|..|||++
T Consensus 318 ~~g~v~~vd~~~~~~~~v~~i~-~~~-----~~~d~~~~pdgr~~~va~~~s---------n~V~ViD~~t~kl~ 377 (567)
T 1qks_A 318 ETGKILLVDYTDLNNLKTTEIS-AER-----FLHDGGLDGSHRYFITAANAR---------NKLVVIDTKEGKLV 377 (567)
T ss_dssp TTTEEEEEETTCSSEEEEEEEE-CCS-----SEEEEEECTTSCEEEEEEGGG---------TEEEEEETTTTEEE
T ss_pred CCCeEEEEecCCCccceeeeee-ccc-----cccCceECCCCCEEEEEeCCC---------CeEEEEECCCCcEE
Confidence 66899999987 32 322 332 211 334678999999998887543 38999999999974
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.59 E-value=3.8e-06 Score=72.88 Aligned_cols=192 Identities=10% Similarity=0.039 Sum_probs=125.9
Q ss_pred CCCeEEeeCCCCeEEE-eecCCCeEEEEEeeCceEEEE-ecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 194 WPGFVEFDDVNGKVLT-YSAQDSIYKVFDLKNYTMLYS-ISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt-~~~~ds~ykVWdL~~Ys~iys-Ls~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
.|--+-+|. +|++.+ ....++.+.+||..+...... ... ..+..+.++ +|.+ .+... .+ -|.+|+..++..
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l-~v~~~-~~--~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTV-YVTDF-NN--RVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCE-EEEET-TT--EEEEECTTCSCC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCE-EEEcC-CC--EEEEEeCCCceE
Confidence 888899984 788888 778889999999877553321 222 478889998 7774 44443 33 467788776654
Q ss_pred EeEeeeccccCCcceeeeeecc-eeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ecCeEEEE
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNE-KLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RNRTVAVW 346 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~e-kllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd~tI~iW 346 (411)
. .+ ..+....+.-|...++ ++++.. .++.|.+||..+..........+..|..+.+-...++|++- .++.|.+|
T Consensus 100 ~-~~--~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 100 T-VL--PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp E-EC--CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred e-ee--ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 3 21 2233355667887755 466664 56789999988776655444445567665554445788887 57899999
Q ss_pred ecCCceeee-eccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 347 NFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 347 n~~Gel~~s-~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+..|..... ...+. .....|++++||.+.++...+. .|.+||..+++
T Consensus 177 ~~~~~~~~~~~~~~~-----~~p~~i~~d~~g~l~v~~~~~~----------~v~~~~~~~~~ 224 (270)
T 1rwi_B 177 EAESNNQVVLPFTDI-----TAPWGIAVDEAGTVYVTEHNTN----------QVVKLLAGSTT 224 (270)
T ss_dssp CTTTCCEEECCCSSC-----CSEEEEEECTTCCEEEEETTTS----------CEEEECTTCSC
T ss_pred ecCCCceEeecccCC-----CCceEEEECCCCCEEEEECCCC----------cEEEEcCCCCc
Confidence 999664443 22332 3667899999999998876654 67777765543
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.59 E-value=1.1e-05 Score=71.28 Aligned_cols=199 Identities=12% Similarity=0.053 Sum_probs=131.1
Q ss_pred ecccCCCCeEEeeCCCCeEEEe-------ecCCCeEEEEEeeCceEEE-Ee-----ccCceeEEEEe-C-CEEEEEEecC
Q 015220 189 SESLKWPGFVEFDDVNGKVLTY-------SAQDSIYKVFDLKNYTMLY-SI-----SDKNVQEIKIS-P-GIMLLIFTKA 253 (411)
Q Consensus 189 ~~~l~~PgfvEFDd~NGkiLt~-------~~~ds~ykVWdL~~Ys~iy-sL-----s~~~VqeIkIS-d-G~~Lai~q~t 253 (411)
...+.+|.=+-|| ++|++++. ...++.+.+||..+.+... .. ....+..+.++ + |.+++....
T Consensus 14 ~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~- 91 (314)
T 1pjx_A 14 TEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR- 91 (314)
T ss_dssp ECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-
T ss_pred hccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-
Confidence 3567789999999 89999888 6678899999998877542 22 22578899998 6 775554432
Q ss_pred CCceeeEEEEecCCcEEeE-eeecc-ccCCcceeeeeecce-eEEeecC----------------ceeeEEEcccceEEE
Q 015220 254 SGHVPLKILSIEDGTVLKS-FNHLL-HRNKKVDFIEQFNEK-LLVKQEN----------------ENLQILDVRNFELTE 314 (411)
Q Consensus 254 ~~~ipiKIl~I~tG~~L~t-~~~LL-~h~K~I~FLE~~~ek-llIKQe~----------------~~LkI~dL~t~e~~~ 314 (411)
+ -|.+|+.+ |+...- ....- .+...+..|...+++ +++...+ ..|..||.. ++...
T Consensus 92 ~---~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 92 L---GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp T---EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred C---CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 2 47789988 886432 11110 122346778887665 4555433 467777765 66554
Q ss_pred eeccccCCCceEEEE----eec-eeEEEE-ecCeEEEEecC--Cc-----eeeeeccccccCCCCccceEEEcCCCCEEE
Q 015220 315 VSRTEFMTPSAFIFL----YEN-QLFLTF-RNRTVAVWNFR--GE-----LVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 315 v~~T~f~hpsAfifL----y~s-qlFlSf-sd~tI~iWn~~--Ge-----l~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
+. +.+..|..+.+- ... .+|++- .++.|.+|+++ |. .+..+.+|.. -..+.+++++||.+.+
T Consensus 167 ~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~----~~p~~i~~d~~G~l~v 241 (314)
T 1pjx_A 167 VD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE----GGADGMDFDEDNNLLV 241 (314)
T ss_dssp EE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS----CEEEEEEEBTTCCEEE
T ss_pred ec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC----CCCCceEECCCCCEEE
Confidence 32 233456554443 222 567776 57899999986 54 3344544430 2467899999999999
Q ss_pred EEecCCCCCccccCCceEEEeeecceee
Q 015220 382 SYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 382 S~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+...+. .|.+||..||+.
T Consensus 242 ~~~~~~----------~i~~~d~~~g~~ 259 (314)
T 1pjx_A 242 ANWGSS----------HIEVFGPDGGQP 259 (314)
T ss_dssp EEETTT----------EEEEECTTCBSC
T ss_pred EEcCCC----------EEEEEcCCCCcE
Confidence 877665 899999888875
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.59 E-value=4.8e-05 Score=68.40 Aligned_cols=151 Identities=11% Similarity=0.099 Sum_probs=91.1
Q ss_pred CeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCc---e-eeEEEEecCCcEEeEeeeccccCCcceeeeee
Q 015220 215 SIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGH---V-PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF 289 (411)
Q Consensus 215 s~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~---i-piKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~ 289 (411)
..+.+||+.+.+.+..|+...+..+..| || ++++....... . ...||.+.+|+.. . +..+ ..+..+ +
T Consensus 152 ~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~---l~~~-~~~~~~--s 223 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-K---MFEK-VSFYAV--D 223 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-E---EEEE-ESEEEE--E
T ss_pred ceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-E---eccC-cceeeE--C
Confidence 5788999999887555553388899999 77 66655443221 2 3455555566643 3 2223 233333 6
Q ss_pred cce--eEEee-c-------CceeeEEEcccceEEEeeccccCCCceEEE-Eee-ceeEEEE-ecCeEEEEecC-Cceeee
Q 015220 290 NEK--LLVKQ-E-------NENLQILDVRNFELTEVSRTEFMTPSAFIF-LYE-NQLFLTF-RNRTVAVWNFR-GELVTS 355 (411)
Q Consensus 290 ~ek--llIKQ-e-------~~~LkI~dL~t~e~~~v~~T~f~hpsAfif-Ly~-sqlFlSf-sd~tI~iWn~~-Gel~~s 355 (411)
+++ ++... . ...|.+|| +++...+.. .++..+.. +.. ..++++. .+++++|| ++ |++.+-
T Consensus 224 pdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~---~~~~~~~~~~~~sdg~~~~~~~~~~~~l~-~~~g~~~~~ 297 (347)
T 2gop_A 224 SDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD---EVDRGVGQAKIKDGKVYFTLFEEGSVNLY-IWDGEIKPI 297 (347)
T ss_dssp ECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST---TCCSEEEEEEEETTEEEEEEEETTEEEEE-EESSSEEEE
T ss_pred CCCCEEEEEEccccCCccccceEEEEC--CCceEeccc---cCCcccCCccEEcCcEEEEEecCCcEEEE-EcCCceEEE
Confidence 555 43333 2 24688888 777766422 23333331 222 3466666 78899999 87 776443
Q ss_pred eccccccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 356 FEDHLLWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 356 ~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
+ .+.. .+..+.+++ .++++++.+.
T Consensus 298 ~-~~~~-----~v~~~~~s~--~~~~~~~~~~ 321 (347)
T 2gop_A 298 A-KGRH-----WIMGFDVDE--IVVYLKETAT 321 (347)
T ss_dssp E-CSSS-----EEEEEEESS--SEEEEEECSS
T ss_pred e-cCCC-----eEEeeeeeC--cEEEEEcCCC
Confidence 3 3333 678899999 7888888775
No 188
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.58 E-value=4.8e-06 Score=75.37 Aligned_cols=194 Identities=10% Similarity=0.036 Sum_probs=113.5
Q ss_pred CCCeEEEeecCC---CeEEEEEeeCceEEEEeccC--ceeE-EEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 203 VNGKVLTYSAQD---SIYKVFDLKNYTMLYSISDK--NVQE-IKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 203 ~NGkiLt~~~~d---s~ykVWdL~~Ys~iysLs~~--~Vqe-IkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
++|+.|++...+ ..+.+||+.+.+.. .++.. .+.. +..| ||..|++..... -|.+|++.+|+...-+..
T Consensus 45 pdG~~l~~~~~~~g~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~spdg~~l~~~~~~~---~l~~~d~~~~~~~~~~~~ 120 (396)
T 3c5m_A 45 QDGKKLLFAGDFDGNRNYYLLNLETQQAV-QLTEGKGDNTFGGFISTDERAFFYVKNEL---NLMKVDLETLEEQVIYTV 120 (396)
T ss_dssp TTSCEEEEEECTTSSCEEEEEETTTTEEE-ECCCSSCBCTTTCEECTTSSEEEEEETTT---EEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCcEE-EeecCCCCccccceECCCCCEEEEEEcCC---cEEEEECCCCCcEEEEec
Confidence 688888776543 47888899888754 44433 2222 6778 888887766544 589999999986554221
Q ss_pred ccc---cCCccee-------------eeeeccee--EEe-----ecCceeeEEEcccceEEEeeccccCCCceEEEEe--
Q 015220 276 LLH---RNKKVDF-------------IEQFNEKL--LVK-----QENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-- 330 (411)
Q Consensus 276 LL~---h~K~I~F-------------LE~~~ekl--lIK-----Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-- 330 (411)
.-+ ..+.|-| ...+++.- .+. .....|.+||+.+++...+.... .....+.|-.
T Consensus 121 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~sp~d 199 (396)
T 3c5m_A 121 DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AWLGHPIYRPFD 199 (396)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES-SCEEEEEEETTE
T ss_pred ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC-cccccceECCCC
Confidence 000 0000000 11222221 111 35668999999999988764221 1112222222
Q ss_pred eceeEEEEec------CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeee
Q 015220 331 ENQLFLTFRN------RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLL 404 (411)
Q Consensus 331 ~sqlFlSfsd------~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i 404 (411)
.+.++++-.+ ..|.+|++.|..++.+..|. +...+..+.+||||+.|+..+.+.. ...++|.+||+
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~---~~~~~~~~~~spdg~~l~~~~~~~~-----~~~~~l~~~d~ 271 (396)
T 3c5m_A 200 DSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHA---EGESCTHEFWIPDGSAMAYVSYFKG-----QTDRVIYKANP 271 (396)
T ss_dssp EEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCC---TTEEEEEEEECTTSSCEEEEEEETT-----TCCEEEEEECT
T ss_pred CCEEEEEecCCCCCCCceEEEEECCCCceeEeeccC---CCccccceEECCCCCEEEEEecCCC-----CccceEEEEEC
Confidence 2234333222 46888888865555554432 1235677899999998777765531 12257999999
Q ss_pred cceee
Q 015220 405 MFVTC 409 (411)
Q Consensus 405 ~tGk~ 409 (411)
.+|+.
T Consensus 272 ~~g~~ 276 (396)
T 3c5m_A 272 ETLEN 276 (396)
T ss_dssp TTCCE
T ss_pred CCCCe
Confidence 99975
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.56 E-value=9.4e-06 Score=76.85 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=76.6
Q ss_pred CCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCC-------CceeeEEEEecCCcEEeEeeeccc---cCCc
Q 015220 214 DSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKAS-------GHVPLKILSIEDGTVLKSFNHLLH---RNKK 282 (411)
Q Consensus 214 ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~-------~~ipiKIl~I~tG~~L~t~~~LL~---h~K~ 282 (411)
|+.+.|||..+.+.+.++....--.+.+| ||.+|.+...-. ..-.|.+|++.|++++.++...-+ +.+.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~ 109 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNY 109 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCC
T ss_pred cCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCC
Confidence 67999999999999988876544499999 898888887421 234588999999999998653211 1245
Q ss_pred ceeeeeecce--eEEeec--CceeeEEEcccceEEE
Q 015220 283 VDFIEQFNEK--LLVKQE--NENLQILDVRNFELTE 314 (411)
Q Consensus 283 I~FLE~~~ek--llIKQe--~~~LkI~dL~t~e~~~ 314 (411)
..-|.+++++ +++... ++.|.+||+.+++...
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVE 145 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEE
Confidence 6678888776 466664 5789999999998765
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.55 E-value=2.1e-05 Score=70.20 Aligned_cols=182 Identities=8% Similarity=-0.021 Sum_probs=120.7
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc------CceeEEEEe-CCEEEEEEe--cC----------
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD------KNVQEIKIS-PGIMLLIFT--KA---------- 253 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~------~~VqeIkIS-dG~~Lai~q--~t---------- 253 (411)
..|--+.||. +|++++....++.+.+||.++.+....... ..+.++.++ +|.+++... .+
T Consensus 69 ~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 69 HHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp SSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC
T ss_pred CCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc
Confidence 3466788875 889988888889999999988775433321 145578888 888766532 11
Q ss_pred CCceeeEEEEecC-CcEEeEeeeccccCCcceeeeeeccee-EE-eecCceeeEEEcc-cceE---EEeeccccCCCceE
Q 015220 254 SGHVPLKILSIED-GTVLKSFNHLLHRNKKVDFIEQFNEKL-LV-KQENENLQILDVR-NFEL---TEVSRTEFMTPSAF 326 (411)
Q Consensus 254 ~~~ipiKIl~I~t-G~~L~t~~~LL~h~K~I~FLE~~~ekl-lI-KQe~~~LkI~dL~-t~e~---~~v~~T~f~hpsAf 326 (411)
...-.-.||.+.. |+... +..+....+-+..++++- ++ .+.++.|.+||+. +|+. ..+-....+.|..+
T Consensus 148 ~~~~~~~l~~~~~~g~~~~----~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 148 MELPGRWVFRLAPDGTLSA----PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp CCSSSCEEEEECTTSCEEE----EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE
T ss_pred ccCCCcEEEEECCCCCEEE----eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE
Confidence 0001125666654 55432 334455567788887764 33 3456899999997 5655 22213344566665
Q ss_pred EEEeeceeEEEEecCeEEEEecCCceeeeeccccccCCCCccceEEE-cCCCCEEEEEecC
Q 015220 327 IFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYI-TSDQDLIISYCKA 386 (411)
Q Consensus 327 ifLy~sqlFlSfsd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~I-s~Dqd~iiS~~~d 386 (411)
.+=...+++++- ++.|.+|+++|+++..+..+.. ..+++. ++|++.|..++.+
T Consensus 224 ~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~~~------~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 224 RVDAGGLIWASA-GDGVHVLTPDGDELGRVLTPQT------TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EEBTTSCEEEEE-TTEEEEECTTSCEEEEEECSSC------CCEEEEESTTSCEEEEEETT
T ss_pred EECCCCCEEEEc-CCeEEEECCCCCEEEEEECCCC------ceeEEEECCCCCEEEEEcCC
Confidence 544444788888 9999999999999998887654 455666 7899988888765
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.51 E-value=2.2e-05 Score=70.08 Aligned_cols=197 Identities=10% Similarity=0.012 Sum_probs=125.7
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
....+|.-+-||.-...++.....++.+.+||..+....+......+..+.++ +|.+++.... . --|.+|+..+|+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~-~--~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHG-L--RRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETT-T--TEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecC-C--CeEEEEcCCCCc
Confidence 34677888889865555888888899999999998733344455589999998 7876554432 2 247889999998
Q ss_pred EEeEeeec-cccCCcceeeeeecceeEEee-------------------cCceeeEEEcccceEEEeeccccCCCceEEE
Q 015220 269 VLKSFNHL-LHRNKKVDFIEQFNEKLLVKQ-------------------ENENLQILDVRNFELTEVSRTEFMTPSAFIF 328 (411)
Q Consensus 269 ~L~t~~~L-L~h~K~I~FLE~~~ekllIKQ-------------------e~~~LkI~dL~t~e~~~v~~T~f~hpsAfif 328 (411)
...-+... -.....+.-+...+++.+... .+..|-.+|.. ++...+. .....|..+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~gi~~ 179 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPI-RDRVKPNGLAF 179 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEE-CCCSSEEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEee-cCCCCCccEEE
Confidence 65432211 111223455777877765553 12355555554 5555432 33445554433
Q ss_pred EeeceeEEEE-ecCeEEEEecC--Cce---eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEe
Q 015220 329 LYENQLFLTF-RNRTVAVWNFR--GEL---VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVS 402 (411)
Q Consensus 329 Ly~sqlFlSf-sd~tI~iWn~~--Gel---~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~ 402 (411)
-...+++++- .+++|.+|+++ |.+ .+.++.+.. ..+.+++++||.+.++. +. .|.+|
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~-----~p~~i~~d~~G~l~v~~--~~----------~v~~~ 242 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG-----KTDGLRVDAGGLIWASA--GD----------GVHVL 242 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS-----CCCSEEEBTTSCEEEEE--TT----------EEEEE
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC-----CCCeEEECCCCCEEEEc--CC----------eEEEE
Confidence 2233445555 56899999995 666 445532222 44679999999998887 43 78888
Q ss_pred eecceee
Q 015220 403 LLMFVTC 409 (411)
Q Consensus 403 ~i~tGk~ 409 (411)
|.. |++
T Consensus 243 ~~~-g~~ 248 (296)
T 3e5z_A 243 TPD-GDE 248 (296)
T ss_dssp CTT-SCE
T ss_pred CCC-CCE
Confidence 875 654
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.50 E-value=9.6e-06 Score=83.48 Aligned_cols=176 Identities=11% Similarity=0.162 Sum_probs=114.4
Q ss_pred eEEEEEeeCce----EEEEeccC--ceeEEEEe-CCEEEEEEecCC--CceeeEEEEecCC--cEEeEeeeccccCC-cc
Q 015220 216 IYKVFDLKNYT----MLYSISDK--NVQEIKIS-PGIMLLIFTKAS--GHVPLKILSIEDG--TVLKSFNHLLHRNK-KV 283 (411)
Q Consensus 216 ~ykVWdL~~Ys----~iysLs~~--~VqeIkIS-dG~~Lai~q~t~--~~ipiKIl~I~tG--~~L~t~~~LL~h~K-~I 283 (411)
.+.+|++.+.+ +++...++ .+..+.+| ||..|++..... ...-|.+|++.+| +.... +..+.. ..
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~---l~~~~~~~~ 320 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA---LIPDLKAQW 320 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE---EECSSSSCE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE---ecCCCCceE
Confidence 37788887654 67777665 48899999 898777766543 5677889999998 41344 333333 33
Q ss_pred eeeeeecceeEEeec----CceeeEEEcccc--eEEEeeccccCCCceEEE--EeeceeEEEE-ecCeEEEEecC--Cce
Q 015220 284 DFIEQFNEKLLVKQE----NENLQILDVRNF--ELTEVSRTEFMTPSAFIF--LYENQLFLTF-RNRTVAVWNFR--GEL 352 (411)
Q Consensus 284 ~FLE~~~ekllIKQe----~~~LkI~dL~t~--e~~~v~~T~f~hpsAfif--Ly~sqlFlSf-sd~tI~iWn~~--Gel 352 (411)
..+...++.+++... +.+|.+||+.++ +...+-+. ++..+.. ....+++++. .|++.+||..+ |..
T Consensus 321 ~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~---~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~ 397 (741)
T 1yr2_A 321 DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE---SKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKP 397 (741)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC---CSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCE
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC---CCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCc
Confidence 344445666777664 456999999885 44443222 2222212 2244777777 78887777654 887
Q ss_pred eeeeccc-cccCCCCccceEEEcCCCC-EEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 353 VTSFEDH-LLWHPDCNTNNIYITSDQD-LIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 353 ~~s~e~H-~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
++.+..+ .. .+..+..+||++ +.++++... .-++|.+||+.||+.
T Consensus 398 ~~~l~~~~~~-----~v~~~~~s~d~~~l~~~~ss~~-------~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 398 AGAVSLPGIG-----SASGLSGRPGDRHAYLSFSSFT-------QPATVLALDPATAKT 444 (741)
T ss_dssp EEECBCSSSC-----EEEEEECCBTCSCEEEEEEETT-------EEEEEEEEETTTTEE
T ss_pred eeeccCCCCe-----EEEEeecCCCCCEEEEEEcCCC-------CCCEEEEEECCCCcE
Confidence 7777642 33 677788899987 556665542 226999999999885
No 193
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.48 E-value=1e-05 Score=82.52 Aligned_cols=200 Identities=11% Similarity=0.012 Sum_probs=125.2
Q ss_pred eEEeeCCCCeEEEeecCCC-----eEEEEEeeCceEEE-EeccCceeEEEEe-CCEEEEEEecCCC-------------c
Q 015220 197 FVEFDDVNGKVLTYSAQDS-----IYKVFDLKNYTMLY-SISDKNVQEIKIS-PGIMLLIFTKASG-------------H 256 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds-----~ykVWdL~~Ys~iy-sLs~~~VqeIkIS-dG~~Lai~q~t~~-------------~ 256 (411)
.+.|- +||+-|++..+++ +++|||+.+.+.+. .+.+..+..+..| ||..|+....... .
T Consensus 129 ~~~~S-PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 129 GYAFS-EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEEC-TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEEC-CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 34555 8999998877654 99999999999775 4444457889999 8877776654433 2
Q ss_pred eeeEEEEecCCcEEeEeeecc-ccCCcceeeeeeccee--EEeec-----CceeeEEEccc------c--eEEEeecccc
Q 015220 257 VPLKILSIEDGTVLKSFNHLL-HRNKKVDFIEQFNEKL--LVKQE-----NENLQILDVRN------F--ELTEVSRTEF 320 (411)
Q Consensus 257 ipiKIl~I~tG~~L~t~~~LL-~h~K~I~FLE~~~ekl--lIKQe-----~~~LkI~dL~t------~--e~~~v~~T~f 320 (411)
.-|.+|++.||+......+-. .+...+.....++++- ++... ...|.+||+.+ + +...+.....
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 338889999987322211111 1222244567788764 44443 57899999987 5 4555433222
Q ss_pred CCCceEEEEeeceeEEEEe----cCeEEEEecC-Cc--eeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccc
Q 015220 321 MTPSAFIFLYENQLFLTFR----NRTVAVWNFR-GE--LVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (411)
Q Consensus 321 ~hpsAfifLy~sqlFlSfs----d~tI~iWn~~-Ge--l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~ 393 (411)
... ..+.-..+.++++-. +..|.+|++. |+ -.+.+..|.. +..+..+..++++.+++++..+.
T Consensus 288 ~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~lv~~~~~~g------ 357 (710)
T 2xdw_A 288 GEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE---KDVLEWVACVRSNFLVLCYLHDV------ 357 (710)
T ss_dssp SCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS---SCEEEEEEEETTTEEEEEEEETT------
T ss_pred cEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC---CCeEEEEEEEcCCEEEEEEEECC------
Confidence 111 111122235555542 2369999998 54 2455555543 23566788888889999998774
Q ss_pred cCCceEEEeeecceee
Q 015220 394 EGNGKLFVSLLMFVTC 409 (411)
Q Consensus 394 ~~~gtI~i~~i~tGk~ 409 (411)
...|.+||+.+|++
T Consensus 358 --~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 358 --KNTLQLHDLATGAL 371 (710)
T ss_dssp --EEEEEEEETTTCCE
T ss_pred --EEEEEEEECCCCCE
Confidence 23567778778874
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.44 E-value=7.5e-05 Score=64.84 Aligned_cols=192 Identities=14% Similarity=0.127 Sum_probs=124.7
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
..|--+.+| ++|++.+....++.+.+||.+.-...+.+. ...+..+.+. +|.+++.... .. -|.+|+. +|+.
T Consensus 57 ~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-~~--~i~~~d~-~g~~ 131 (299)
T 2z2n_A 57 AKVMCLTIS-SDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN-GN--RIGRITD-DGKI 131 (299)
T ss_dssp CCEEEEEEC-TTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETT-TT--EEEEECT-TCCE
T ss_pred CceeeEEEC-CCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecC-Cc--eEEEECC-CCCE
Confidence 567778888 588998888778888999987433334443 3478889988 6765444322 22 3567787 7776
Q ss_pred EeEeeeccccCCcceeeeeecc-eeEEee-cCceeeEEEcccceEEEee-ccccCCCceEEEEeeceeEEEE-ecCeEEE
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNE-KLLVKQ-ENENLQILDVRNFELTEVS-RTEFMTPSAFIFLYENQLFLTF-RNRTVAV 345 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~e-kllIKQ-e~~~LkI~dL~t~e~~~v~-~T~f~hpsAfifLy~sqlFlSf-sd~tI~i 345 (411)
..- . +-.....+..|...++ ++++.. .++.|..||. +++...+. .+....|..+.+-...++|++- .++.|.+
T Consensus 132 ~~~-~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 208 (299)
T 2z2n_A 132 REY-E-LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGR 208 (299)
T ss_dssp EEE-E-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEe-c-CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEE
Confidence 532 1 1123345677888765 556644 5689999999 88877642 2233344443332233778777 5789999
Q ss_pred EecCCceee-eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 346 WNFRGELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 346 Wn~~Gel~~-s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
|++.|+... .+.. +......+++++||.+.++...+. .|.++|. +|+
T Consensus 209 ~~~~g~~~~~~~~~-----~~~~~~~i~~~~~g~l~v~~~~~~----------~i~~~d~-~g~ 256 (299)
T 2z2n_A 209 ITTSGEITEFKIPT-----PNARPHAITAGAGIDLWFTEWGAN----------KIGRLTS-NNI 256 (299)
T ss_dssp ECTTCCEEEEECSS-----TTCCEEEEEECSTTCEEEEETTTT----------EEEEEET-TTE
T ss_pred ECCCCcEEEEECCC-----CCCCceeEEECCCCCEEEeccCCc----------eEEEECC-CCc
Confidence 999887543 1222 234678999999999888865544 6777766 444
No 195
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.44 E-value=7.4e-06 Score=73.70 Aligned_cols=178 Identities=13% Similarity=0.109 Sum_probs=111.9
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC--ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccC
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK--NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRN 280 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~--~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~ 280 (411)
++..++..+.++++++| ..+.+..+.+. .+..+.++ +|.++++.. ... -|.+|+..+|+....+ ..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-~~~--~i~~~d~~~~~~~~~~---~~~~ 86 (333)
T 2dg1_A 16 KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDV-FEG--NIFKINPETKEIKRPF---VSHK 86 (333)
T ss_dssp GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEET-TTC--EEEEECTTTCCEEEEE---ECSS
T ss_pred CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEEC-CCC--EEEEEeCCCCcEEEEe---eCCC
Confidence 34444444678888899 44556666644 67888888 787544433 333 4678999999876542 2345
Q ss_pred Ccceeeeeecce-eEEeecC-----ceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEec-------CeEE
Q 015220 281 KKVDFIEQFNEK-LLVKQEN-----ENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFRN-------RTVA 344 (411)
Q Consensus 281 K~I~FLE~~~ek-llIKQe~-----~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfsd-------~tI~ 344 (411)
..+..|...+++ +++...+ ..|.+||..+++...+.... .+......++.. +++++-.. +.|-
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL-STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS-SSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC-ccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 678888888765 5665543 48999999998876432111 122233334433 67777652 4566
Q ss_pred EEecCCceeeeeccccccCCCCccceEEEcCCCCE-EEEEecCCCCCccccCCceEEEeeecc
Q 015220 345 VWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDL-IISYCKADSDDPLAEGNGKLFVSLLMF 406 (411)
Q Consensus 345 iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~-iiS~~~d~~~~~~~~~~gtI~i~~i~t 406 (411)
.|+..|..++.+..+.. ..+.++++|||+. .++.+.+. .|.+||+.+
T Consensus 166 ~~~~~~~~~~~~~~~~~-----~~~~i~~~~dg~~l~v~~~~~~----------~i~~~d~~~ 213 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQNIS-----VANGIALSTDEKVLWVTETTAN----------RLHRIALED 213 (333)
T ss_dssp EECTTSCCEEEEEEEES-----SEEEEEECTTSSEEEEEEGGGT----------EEEEEEECT
T ss_pred EEeCCCCEEEEeecCCC-----cccceEECCCCCEEEEEeCCCC----------eEEEEEecC
Confidence 66666544445544443 5688999999984 45554444 888888863
No 196
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.43 E-value=1.9e-07 Score=89.12 Aligned_cols=179 Identities=11% Similarity=0.029 Sum_probs=94.5
Q ss_pred CeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc---cC
Q 015220 205 GKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH---RN 280 (411)
Q Consensus 205 GkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~---h~ 280 (411)
|..|.....|+.+..||.++.+.+-+.....+....+. +|.+++.. ... -.|..||.+||+.++...+-.+ ..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~-s~d--g~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPD-PND--GSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEEC-TTT--CCEEEC-----CCSEECSCCHHHHHTT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEe-CCC--CEEEEEECCCCceeeeeeccCcccccc
Confidence 44455556788999999999999877665444433333 66544443 222 2478899999999887542211 11
Q ss_pred CcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEE-eeceeEEEEecCeEEEEecC-Cceeeeecc
Q 015220 281 KKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFL-YENQLFLTFRNRTVAVWNFR-GELVTSFED 358 (411)
Q Consensus 281 K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifL-y~sqlFlSfsd~tI~iWn~~-Gel~~s~e~ 358 (411)
.|+- ..++.+++...+..|.+||..+|+..- +.- .+....+. ....+|+...+++|..||.+ |+++-+++.
T Consensus 86 sp~~---~~~~~v~~g~~dg~v~a~D~~tG~~~w---~~~-~~~~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 86 SPCR---SSDGILYMGKKQDIWYVIDLLTGEKQQ---TLS-SAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp CSCC--------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred CceE---ecCCEEEEEeCCCEEEEEECCCCcEEE---Eec-CCCcccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 2211 135566777788899999999998764 111 11111111 33456666688999999998 998877664
Q ss_pred ccccCCCCccceEEEcCCC---CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 359 HLLWHPDCNTNNIYITSDQ---DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 359 H~~~~~~c~~n~i~Is~Dq---d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.. ....++.|. +.++.++.+ |.|..||..||+++
T Consensus 159 ~~~-------~~~~~~~~~~~~~~v~~~~~d----------g~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 159 FDY-------AASLPEDDVDYKMSHFVSNGD----------GLVVTVDSESGDVL 196 (369)
T ss_dssp EEE-------CCBCCCCCTTCCCCEEEEETS----------CEEEEECTTTCCEE
T ss_pred ccc-------cCccccCCccccceEEEECCC----------CEEEEEECCCCcEE
Confidence 321 223334432 445556655 48999999999874
No 197
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.42 E-value=0.00067 Score=62.72 Aligned_cols=262 Identities=14% Similarity=0.123 Sum_probs=151.9
Q ss_pred eccceehhhhccccceeeecccccEEEEEeCCC---------CceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 103 AARDIVFALAQSGVCAAFCRETNQRICFLNVTA---------DEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 103 ~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~---------~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
.+++.|++....|.-.|||..||+.+=..+... ..+..++... ++.+++.+ .+ ..|.|--.
T Consensus 51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~---~~--g~l~a~d~--- 120 (376)
T 3q7m_A 51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGS---EK--AQVYALNT--- 120 (376)
T ss_dssp EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEE---TT--SEEEEEET---
T ss_pred EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEc---CC--CEEEEEEC---
Confidence 357888888888899999999999876666532 2233333333 23444422 11 23333221
Q ss_pred hhhhCCCCCCCcceee----cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccC-ce------eEEEEe
Q 015220 174 YIRRGKPDAGFALFES----ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDK-NV------QEIKIS 242 (411)
Q Consensus 174 ~i~~gk~~~~~~LF~~----~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~-~V------qeIkIS 242 (411)
.-|+ .+.+. .....|-. + +|++++ ...++.+..+|.++.+.+.+.... .+ ....+.
T Consensus 121 --~tG~-----~~W~~~~~~~~~~~p~~---~--~~~v~v-~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 121 --SDGT-----VAWQTKVAGEALSRPVV---S--DGLVLI-HTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp --TTCC-----EEEEEECSSCCCSCCEE---E--TTEEEE-ECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred --CCCC-----EEEEEeCCCceEcCCEE---E--CCEEEE-EcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 1222 22221 12223321 1 455554 456788889999999888665532 22 444555
Q ss_pred CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCC-------cc-eeeeeecceeEEeecCceeeEEEcccceEEE
Q 015220 243 PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNK-------KV-DFIEQFNEKLLVKQENENLQILDVRNFELTE 314 (411)
Q Consensus 243 dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K-------~I-~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~ 314 (411)
+|.+++-. ..-.+..++..||+.++++..-.+... .+ -...+.++.+++...+..|..+|..+|+..-
T Consensus 188 ~~~v~~g~----~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w 263 (376)
T 3q7m_A 188 FGAAVVGG----DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMW 263 (376)
T ss_dssp TTEEEECC----TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEE
T ss_pred CCEEEEEc----CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEe
Confidence 77654421 123578899999999998653211100 01 1223457788888889999999999998764
Q ss_pred eeccccCCCceEEEEeeceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccc
Q 015220 315 VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLA 393 (411)
Q Consensus 315 v~~T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~ 393 (411)
- ..... ..-..+....+|+.-.++.+..+|.. |+++-+.+.... -......+ +++.|+.++.+
T Consensus 264 ~--~~~~~-~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~----~~~~~~~~--~~~~l~v~~~~------- 327 (376)
T 3q7m_A 264 K--RELGS-VNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLH----RLLTSPVL--YNGNLVVGDSE------- 327 (376)
T ss_dssp E--ECCCC-EEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECTTTT----SCCCCCEE--ETTEEEEECTT-------
T ss_pred e--ccCCC-CCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecccCC----CcccCCEE--ECCEEEEEeCC-------
Confidence 1 11111 22233455578887788999999998 998766552111 01122222 24556655544
Q ss_pred cCCceEEEeeecceeee
Q 015220 394 EGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 394 ~~~gtI~i~~i~tGk~~ 410 (411)
|.+..+|..||+.+
T Consensus 328 ---g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 328 ---GYLHWINVEDGRFV 341 (376)
T ss_dssp ---SEEEEEETTTCCEE
T ss_pred ---CeEEEEECCCCcEE
Confidence 48888888888864
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.41 E-value=0.0001 Score=64.07 Aligned_cols=193 Identities=12% Similarity=0.070 Sum_probs=125.0
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
+..|.-+.+| ++|++.+....++.+.+||.......+.+. ...+..+.+. +|.+++.. ...+ -|..++.. |+
T Consensus 61 ~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~~~~--~i~~~~~~-g~ 135 (300)
T 2qc5_A 61 DAKVMCLIVS-SLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQ-LNGD--RIGKLTAD-GT 135 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEE-TTTT--EEEEECTT-SC
T ss_pred CCcceeEEEC-CCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEc-cCCC--eEEEECCC-CC
Confidence 4567888887 788998888878889999988333334554 3478899988 77655443 3222 45667776 77
Q ss_pred EEeEeeeccccCCcceeeeeec-ceeEEeec-CceeeEEEcccceEEEeec-cccCCCceEEEEeeceeEEEE-ecCeEE
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFN-EKLLVKQE-NENLQILDVRNFELTEVSR-TEFMTPSAFIFLYENQLFLTF-RNRTVA 344 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~-ekllIKQe-~~~LkI~dL~t~e~~~v~~-T~f~hpsAfifLy~sqlFlSf-sd~tI~ 344 (411)
...- . +-.....+..|...+ +++++... ++.|..||. +++...+.. ..+..|..+.+-...++|++- .++.|.
T Consensus 136 ~~~~-~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 136 IYEY-D-LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIG 212 (300)
T ss_dssp EEEE-E-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred EEEc-c-CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEE
Confidence 6632 2 111334566677765 45666654 678999999 777665432 233345444333234788887 567899
Q ss_pred EEecCCceeee-eccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 345 VWNFRGELVTS-FEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 345 iWn~~Gel~~s-~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+|+..|+.... +..+. .....+++++||.+.++...+. .|..+|. +|+
T Consensus 213 ~~~~~g~~~~~~~~~~~-----~~~~~i~~d~~g~l~v~~~~~~----------~i~~~~~-~g~ 261 (300)
T 2qc5_A 213 RITTTGEISEYDIPTPN-----ARPHAITAGKNSEIWFTEWGAN----------QIGRITN-DNT 261 (300)
T ss_dssp EECTTCCEEEEECSSTT-----CCEEEEEECSTTCEEEEETTTT----------EEEEECT-TSC
T ss_pred EEcCCCcEEEEECCCCC-----CCceEEEECCCCCEEEeccCCC----------eEEEECC-CCc
Confidence 99998886552 33332 2567899999999888875443 6666665 443
No 199
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.40 E-value=3.9e-05 Score=69.40 Aligned_cols=188 Identities=11% Similarity=0.048 Sum_probs=114.3
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceEE--EEeccCceeEEEEeCCEEEEEEe---------------------------c
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTML--YSISDKNVQEIKISPGIMLLIFT---------------------------K 252 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~i--ysLs~~~VqeIkISdG~~Lai~q---------------------------~ 252 (411)
.++|+.|++...+..+.+||+.+.+.. +..... -..+|..|++.. .
T Consensus 89 spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 89 STDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred CCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 578999999999999999999987643 332222 112444444321 1
Q ss_pred CCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeec-ce--eEEeecC------ceeeEEEcccceEEEeeccccCCC
Q 015220 253 ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFN-EK--LLVKQEN------ENLQILDVRNFELTEVSRTEFMTP 323 (411)
Q Consensus 253 t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~-ek--llIKQe~------~~LkI~dL~t~e~~~v~~T~f~hp 323 (411)
.....-|.+|++.+|+...- ..+...+..+..++ ++ ++..+++ ..|.+||+.+++...+.. ..+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~----~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~ 236 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVI----HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE---HAE 236 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEE----EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC---CCT
T ss_pred CCCcceEEEEECCCCcEEee----ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec---cCC
Confidence 14556788999999987654 34556677777777 33 4444433 468899998887665432 122
Q ss_pred -ceEEEEeec---e-eEEEEec-----CeEEEEecC-CceeeeeccccccCCCCccceEEEcC-CCCEEEEEecCCC---
Q 015220 324 -SAFIFLYEN---Q-LFLTFRN-----RTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITS-DQDLIISYCKADS--- 388 (411)
Q Consensus 324 -sAfifLy~s---q-lFlSfsd-----~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~-Dqd~iiS~~~d~~--- 388 (411)
..+..+..+ + ++++..+ ++|.+||+. |++.. +..... + + +..|| ||+++++.+.+.+
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~----~--~-~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEE-VMVMPP----C--S-HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEE-EEECCS----E--E-EEEECSSSSEEEEEECCC----
T ss_pred CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEE-eeeCCC----C--C-CCccCCCCceEEEecCCcceee
Confidence 234344444 3 4433332 459999998 65433 221111 1 2 78889 9999988665421
Q ss_pred CC---ccccCCceEEEeeecceee
Q 015220 389 DD---PLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 389 ~~---~~~~~~gtI~i~~i~tGk~ 409 (411)
.+ ....+.+.|.+||+.+|++
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBC
T ss_pred ccccccccCCCCcEEEEecccCce
Confidence 00 0112457999999999875
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.33 E-value=9.7e-06 Score=74.68 Aligned_cols=152 Identities=8% Similarity=0.041 Sum_probs=100.6
Q ss_pred eCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eecccc
Q 015220 242 SPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEF 320 (411)
Q Consensus 242 SdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f 320 (411)
|||.+|+.... + --|.+||.+||++++++.. +....+..+.+.+++.++.+.++.++.||. +|+..- ......
T Consensus 3 ~~~~~lv~~~~-~--~~v~~~d~~tG~~~w~~~~--~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 3 SPQHLLVGGSG-W--NKIAIINKDTKEIVWEYPL--EKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CCCEEEEECTT-C--SEEEEEETTTTEEEEEEEC--CTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT
T ss_pred CCCcEEEeeCC-C--CEEEEEECCCCeEEEEeCC--CccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC
Confidence 47776666433 3 3456999999999999652 221467778888887766688999999999 776554 322111
Q ss_pred CCCceEEEEeeceeEEEEe--cCeEEEEecCCceeeeeccccc-cCCCCccceEEEcCCCCEEEEEecCCCCCccccCCc
Q 015220 321 MTPSAFIFLYENQLFLTFR--NRTVAVWNFRGELVTSFEDHLL-WHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNG 397 (411)
Q Consensus 321 ~hpsAfifLy~sqlFlSfs--d~tI~iWn~~Gel~~s~e~H~~-~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~g 397 (411)
.+.....++...+++++.+ ++.|..++..|+++.++.-... -.+.-....+..++||+++++.+.+.
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~---------- 146 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS---------- 146 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT----------
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC----------
Confidence 1222333444557788775 4677777888999987752110 00001345678899999999887654
Q ss_pred eEEEeeecceeee
Q 015220 398 KLFVSLLMFVTCK 410 (411)
Q Consensus 398 tI~i~~i~tGk~~ 410 (411)
.|..||.. ||.+
T Consensus 147 ~v~~~d~~-G~~~ 158 (276)
T 3no2_A 147 EVREIAPN-GQLL 158 (276)
T ss_dssp EEEEECTT-SCEE
T ss_pred EEEEECCC-CCEE
Confidence 89999987 8865
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.29 E-value=0.0002 Score=64.91 Aligned_cols=198 Identities=7% Similarity=0.044 Sum_probs=125.8
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
..+|.=.-||+.++.++.....++.+..||..+.+...--....+..+.++ +|.+++ .. .. -|.+|+.++|+..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v-~~--~~--~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVA-TI--GT--KFCALNWKEQSAV 86 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEE-EE--TT--EEEEEETTTTEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEE-EE--CC--eEEEEECCCCcEE
Confidence 345556667888899999988899999999988765322235688999998 777444 33 22 4678999999865
Q ss_pred eEeeecc-ccCCcceeeeeeccee-EEeec----------CceeeEEEccc-ceEEEeeccccCCCceEEEEeec-eeEE
Q 015220 271 KSFNHLL-HRNKKVDFIEQFNEKL-LVKQE----------NENLQILDVRN-FELTEVSRTEFMTPSAFIFLYEN-QLFL 336 (411)
Q Consensus 271 ~t~~~LL-~h~K~I~FLE~~~ekl-lIKQe----------~~~LkI~dL~t-~e~~~v~~T~f~hpsAfifLy~s-qlFl 336 (411)
.-....- .....++-+...+++. ++..- ...-.||-+.. ++...+. +.+..|..+.+-... .+|+
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-DQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-EEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-eccccccceEEcCCCCEEEE
Confidence 3221110 1123355677777655 44331 12345665543 4444332 333345444333222 5677
Q ss_pred EE-ecCeEEEEecC---Cce-----eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecce
Q 015220 337 TF-RNRTVAVWNFR---GEL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 337 Sf-sd~tI~iWn~~---Gel-----~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tG 407 (411)
+- .+++|.+|+++ |.+ +.++.++.. ....+++++||.+.++..... .|..||..||
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~-----~p~g~~~d~~G~lwva~~~~~----------~v~~~d~~tG 230 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQ-----IPDGMCIDAEGKLWVACYNGG----------RVIRLDPVTG 230 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGC-----EEEEEEEBTTSCEEEEEETTT----------EEEEECTTTC
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCC-----CCCeeEECCCCCEEEEEcCCC----------EEEEEcCCCc
Confidence 76 57899999873 554 334444433 557899999999999877654 8999999999
Q ss_pred eee
Q 015220 408 TCK 410 (411)
Q Consensus 408 k~~ 410 (411)
+++
T Consensus 231 ~~~ 233 (297)
T 3g4e_A 231 KRL 233 (297)
T ss_dssp CEE
T ss_pred eEE
Confidence 875
No 202
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.29 E-value=0.00019 Score=69.26 Aligned_cols=179 Identities=11% Similarity=0.081 Sum_probs=109.8
Q ss_pred CCCeEEEEEeeCceEEEEecc---------CceeEEEEe-CCEEEEEEecC-CCceeeEEEEecCCcEEeE-eee-----
Q 015220 213 QDSIYKVFDLKNYTMLYSISD---------KNVQEIKIS-PGIMLLIFTKA-SGHVPLKILSIEDGTVLKS-FNH----- 275 (411)
Q Consensus 213 ~ds~ykVWdL~~Ys~iysLs~---------~~VqeIkIS-dG~~Lai~q~t-~~~ipiKIl~I~tG~~L~t-~~~----- 275 (411)
.++++-|||..+.+.+.+|.- ..-..+.+| ||..|++.+.. .+. |.++| +||+++.+ +..
T Consensus 95 ~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~--v~viD-~t~~~~~~~i~~~~~~~ 171 (373)
T 2mad_H 95 RTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA--VGLVV-QGGSSDDQLLSSPTCYH 171 (373)
T ss_pred CCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe--EEEEE-CCCCEEeEEcCCCceEE
Confidence 367899999999999987752 234578999 99999998754 343 66789 99999888 431
Q ss_pred ccccCCcceeeeee---------------------------------------cceeEEeecCceeeEEEcccceEEEee
Q 015220 276 LLHRNKKVDFIEQF---------------------------------------NEKLLVKQENENLQILDVRNFELTEVS 316 (411)
Q Consensus 276 LL~h~K~I~FLE~~---------------------------------------~ekllIKQe~~~LkI~dL~t~e~~~v~ 316 (411)
+.+..+. -|+... ..++++-..+..+-+.|+.+++...+.
T Consensus 172 ~~~~~~~-~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~ 250 (373)
T 2mad_H 172 IHPGAPS-TFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKA 250 (373)
T ss_pred EEeCCCc-eEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEee
Confidence 0111000 011111 122222223345666666554322111
Q ss_pred c---------cccCCCceEEEEe----eceeEEEEe----------cCeEEEEecC-CceeeeeccccccCCCCccceEE
Q 015220 317 R---------TEFMTPSAFIFLY----ENQLFLTFR----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIY 372 (411)
Q Consensus 317 ~---------T~f~hpsAfifLy----~sqlFlSfs----------d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~ 372 (411)
. .....|.....++ .+++|++.. +++|.+.|+. ++.++++.--. ....++
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~------~p~~i~ 324 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH------DVDAIS 324 (373)
T ss_pred eeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC------CcCeEE
Confidence 0 0111343322233 237787764 3589999999 89989884211 357899
Q ss_pred EcCCCC-EEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 373 ITSDQD-LIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 373 Is~Dqd-~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+||||+ ++++..-. .|+|-++|..|||.+
T Consensus 325 ~s~Dg~~~l~v~~~~---------~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 325 VAQDGGPDLYALSAG---------TEVLHIYDAGAGDQD 354 (373)
T ss_pred ECCCCCeEEEEEcCC---------CCeEEEEECCCCCEE
Confidence 999999 77776532 149999999999975
No 203
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.28 E-value=0.00018 Score=63.54 Aligned_cols=193 Identities=10% Similarity=0.055 Sum_probs=119.3
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEE-ec------cCceeEEEEe-CCEEEEEEecCC----------
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYS-IS------DKNVQEIKIS-PGIMLLIFTKAS---------- 254 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iys-Ls------~~~VqeIkIS-dG~~Lai~q~t~---------- 254 (411)
..|--+.+|.-+|++++....+ .+.+||.. .+.... .. ...+..+.++ +|.+++......
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccc
Confidence 3466777876558888876644 57779988 554322 21 1257889998 787655543321
Q ss_pred --CceeeEEEEecCCcEEeEeeeccccCCcceeeeee----cce--eEEee-cCceeeEEEcc-cceEEE--eecccc--
Q 015220 255 --GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF----NEK--LLVKQ-ENENLQILDVR-NFELTE--VSRTEF-- 320 (411)
Q Consensus 255 --~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~----~ek--llIKQ-e~~~LkI~dL~-t~e~~~--v~~T~f-- 320 (411)
...-|..++.. |+....+ .+....+-+... +++ +++.. .++.|.+||+. +++... +-.+.-
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~----~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVD----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEE----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred cCCCCeEEEECCC-CCEEEec----cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 11234445544 6654432 222334667777 664 56664 57899999997 555321 111111
Q ss_pred --CCCceEEEEeeceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEE-EEEecCCCCCccccC
Q 015220 321 --MTPSAFIFLYENQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEG 395 (411)
Q Consensus 321 --~hpsAfifLy~sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~~ 395 (411)
..|..+.+-...+++++- .++.|.+||++ |+++.++..+.. ....+++++||+.| ++...+
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-----~~~~i~~~~dg~~l~v~~~~~--------- 289 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFE-----KPSNLHFKPQTKTIFVTEHEN--------- 289 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSS-----CEEEEEECTTSSEEEEEETTT---------
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCC-----CceeEEECCCCCEEEEEeCCC---------
Confidence 345443322233788876 67899999999 998888876644 67889999999944 544433
Q ss_pred CceEEEeeecce
Q 015220 396 NGKLFVSLLMFV 407 (411)
Q Consensus 396 ~gtI~i~~i~tG 407 (411)
|.|..+++.+.
T Consensus 290 -~~l~~~~~~~~ 300 (314)
T 1pjx_A 290 -NAVWKFEWQRN 300 (314)
T ss_dssp -TEEEEEECSSC
T ss_pred -CeEEEEeCCCC
Confidence 48888887653
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=9.9e-05 Score=68.71 Aligned_cols=199 Identities=13% Similarity=0.092 Sum_probs=121.2
Q ss_pred CCCCeEEeeCCCCeEEEeec--CCCeEEEEEeeCceEEEEec-------c--CceeEEEEe-CCEEEEEEecC--CCcee
Q 015220 193 KWPGFVEFDDVNGKVLTYSA--QDSIYKVFDLKNYTMLYSIS-------D--KNVQEIKIS-PGIMLLIFTKA--SGHVP 258 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~--~ds~ykVWdL~~Ys~iysLs-------~--~~VqeIkIS-dG~~Lai~q~t--~~~ip 258 (411)
.+|.-|.++ ++|++++..+ .++..+||.+.+.+.. ... . ..+..|.++ +|.++++.... ...--
T Consensus 17 ~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEEC-CCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 689999997 4789988854 2333788888755533 221 1 278999999 68866655432 00123
Q ss_pred eEEEEecCCcEEeEeeec---cccCCcceeeeeec--ceeEEee----cCceeeEEEcccceEEEeecc-ccCCCc--e-
Q 015220 259 LKILSIEDGTVLKSFNHL---LHRNKKVDFIEQFN--EKLLVKQ----ENENLQILDVRNFELTEVSRT-EFMTPS--A- 325 (411)
Q Consensus 259 iKIl~I~tG~~L~t~~~L---L~h~K~I~FLE~~~--ekllIKQ----e~~~LkI~dL~t~e~~~v~~T-~f~hps--A- 325 (411)
|.+|++.||++++++.+- ..+...++-+.+.+ ..++|.. .++.|.+||+.+++..++... ..+.|. .
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 788999999998876521 12223456677774 4567775 478999999999988874321 011111 1
Q ss_pred ----------------------EEEEeec----eeEEEEecCeEEEEecCCc-----------eee--eeccccccCCCC
Q 015220 326 ----------------------FIFLYEN----QLFLTFRNRTVAVWNFRGE-----------LVT--SFEDHLLWHPDC 366 (411)
Q Consensus 326 ----------------------fifLy~s----qlFlSfsd~tI~iWn~~Ge-----------l~~--s~e~H~~~~~~c 366 (411)
.--++.+ .+|++=.++. ++|.++-+ +.. ...++.+
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g----- 248 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKP----- 248 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECC-----
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCC-----
Confidence 1112222 2333332221 44544311 111 1223444
Q ss_pred ccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 367 NTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 367 ~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
..+.+++++||.+.++...+. +|.+||..+|+.
T Consensus 249 ~pdgia~d~~G~l~va~~~~~----------~V~~~d~~~G~~ 281 (343)
T 2qe8_A 249 ICDGISIDKDHNIYVGDLAHS----------AIGVITSADRAY 281 (343)
T ss_dssp SCSCEEECTTCCEEEEEGGGT----------EEEEEETTTTEE
T ss_pred CCceEEECCCCCEEEEccCCC----------eEEEEECCCCCE
Confidence 567899999999999877665 999999877774
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.24 E-value=3.9e-05 Score=76.39 Aligned_cols=171 Identities=18% Similarity=0.208 Sum_probs=124.2
Q ss_pred eEEeeCCCCeEEEeecCCCeEEEEEeeCce-------------EEEEeccCceeEEEEeCCEEEEEEecCCCceeeEEEE
Q 015220 197 FVEFDDVNGKVLTYSAQDSIYKVFDLKNYT-------------MLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILS 263 (411)
Q Consensus 197 fvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys-------------~iysLs~~~VqeIkISdG~~Lai~q~t~~~ipiKIl~ 263 (411)
-.......|.+.+.++ ..++||++++-. .+..+.. |..+.. ||..|++. .. .-|++|+
T Consensus 42 lLais~~~gll~a~~~--~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~--V~~l~f-d~~~L~v~--~~--~~l~v~d 112 (388)
T 1xip_A 42 NLDISNSKSLFVAASG--SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD--VIFVCF-HGDQVLVS--TR--NALYSLD 112 (388)
T ss_dssp CEEEETTTTEEEEEET--TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT--EEEEEE-ETTEEEEE--ES--SEEEEEE
T ss_pred EEEEcCCCCEEEEeCC--CEEEEEEhhHhhhhhccccccccceEEeeCCC--eeEEEE-CCCEEEEE--cC--CcEEEEE
Confidence 3455566666555444 488899987533 3455555 999999 99999998 22 4699999
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec--eeEEEEecC
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN--QLFLTFRNR 341 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s--qlFlSfsd~ 341 (411)
+.+-....+ .-.+++++.-+-..+..+++-..+..|.+||+.++.... +...+.+++.+ ++.+...|+
T Consensus 113 v~sl~~~~~---~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSpkG~~vg~~dg 182 (388)
T 1xip_A 113 LEELSEFRT---VTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTNSQLAVLLKDR 182 (388)
T ss_dssp SSSTTCEEE---EEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECSSEEEEEETTS
T ss_pred chhhhccCc---cceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcCCceEEEEcCC
Confidence 887664443 223456666555556568888999999999999888754 33567788877 767777999
Q ss_pred eEEEEecCCce---eeee------ccccccCCCCccceEEEcCCCCEEEEEecCCC
Q 015220 342 TVAVWNFRGEL---VTSF------EDHLLWHPDCNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 342 tI~iWn~~Gel---~~s~------e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
++++|++.|.. .+++ ++|.+ | ++.+-.|.-.+++.++++|.....
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~-~-~~~V~sI~wl~~~~flv~y~~~~~ 236 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPV-E-EYSPLSVTILSPQDFLAVFGNVIS 236 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCT-T-TSEEEEEEESSSSEEEEEEECCCC
T ss_pred cEEEEcCCCccccccceecCCcccccccC-C-CeeEEEEEEecCCeEEEEEcCCCC
Confidence 99999999655 6677 54322 1 358889999999999999999764
No 206
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.20 E-value=0.00046 Score=59.91 Aligned_cols=192 Identities=14% Similarity=0.078 Sum_probs=123.3
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCC
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDG 267 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG 267 (411)
...|--+-+|. +|++.+....++.+.+||.. .+.. +.+.. ..+..+.++ +|.+++. ....+ -|..++.. |
T Consensus 19 ~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~--~v~~~d~~-g 92 (300)
T 2qc5_A 19 DSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFT-ENGAN--KIGKLSKK-G 92 (300)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEE-ETTTT--EEEEECTT-S
T ss_pred CCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEE-ecCCC--eEEEECCC-C
Confidence 34566666664 78999988888999999988 4433 34443 478889888 6765443 33233 35677777 7
Q ss_pred cEEeEeeeccccCCcceeeeeec-ceeEEeec-CceeeEEEcccceEEEeecc-ccCCCceEEEEeeceeEEEE-ecCeE
Q 015220 268 TVLKSFNHLLHRNKKVDFIEQFN-EKLLVKQE-NENLQILDVRNFELTEVSRT-EFMTPSAFIFLYENQLFLTF-RNRTV 343 (411)
Q Consensus 268 ~~L~t~~~LL~h~K~I~FLE~~~-ekllIKQe-~~~LkI~dL~t~e~~~v~~T-~f~hpsAfifLy~sqlFlSf-sd~tI 343 (411)
+.. .+.. -.....+.-|.+.+ +.+++... ++.|..||.. ++....... ...+|..+.+-...++|++- .++.|
T Consensus 93 ~~~-~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 93 GFT-EYPL-PQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp CEE-EEEC-SSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CeE-EecC-CCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 763 3221 11234566777775 45666654 6789999998 776654222 33345444433334788877 47899
Q ss_pred EEEecCCceee-eeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 344 AVWNFRGELVT-SFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 344 ~iWn~~Gel~~-s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
..|+..|+... .+..+. .....+++++||.+.++..... .|.++|. +|+
T Consensus 170 ~~~~~~g~~~~~~~~~~~-----~~~~~i~~d~~g~l~v~~~~~~----------~i~~~~~-~g~ 219 (300)
T 2qc5_A 170 GRITNTGKLEEYPLPTNA-----AAPVGITSGNDGALWFVEIMGN----------KIGRITT-TGE 219 (300)
T ss_dssp EEECTTCCEEEEECSSTT-----CCEEEEEECTTSSEEEEETTTT----------EEEEECT-TCC
T ss_pred EEECCCCcEEEeeCCCCC-----CCcceEEECCCCCEEEEccCCC----------EEEEEcC-CCc
Confidence 99999888664 222222 3678899999999988765443 6666666 554
No 207
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.16 E-value=0.00067 Score=65.42 Aligned_cols=190 Identities=9% Similarity=0.033 Sum_probs=117.6
Q ss_pred eEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCc-------eeeEEEEecCCcEEeEeeec-ccc---CCcc
Q 015220 216 IYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGH-------VPLKILSIEDGTVLKSFNHL-LHR---NKKV 283 (411)
Q Consensus 216 ~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~-------ipiKIl~I~tG~~L~t~~~L-L~h---~K~I 283 (411)
++-|+|+.+.+.+-+|.--..-.+.+| ||..|.+.+.-.++ -.+.++|+.|++++.++... .++ ....
T Consensus 48 ~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p 127 (373)
T 2mad_H 48 QQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYS 127 (373)
T ss_pred EEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCc
Confidence 889999999999999985544599999 99999998753222 34789999999999886421 111 1234
Q ss_pred eeeeeecce--eEEeec--CceeeEEEcccceEEEeeccccCCCceEEEEeec-eeEEEE-ecCeEEEEecCCcee----
Q 015220 284 DFIEQFNEK--LLVKQE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-QLFLTF-RNRTVAVWNFRGELV---- 353 (411)
Q Consensus 284 ~FLE~~~ek--llIKQe--~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-qlFlSf-sd~tI~iWn~~Gel~---- 353 (411)
.-+.+++++ +++... ++.|.++| .+++... +....|..+.+.... +.|+++ .|+++.+|+..|..+
T Consensus 128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~ 203 (373)
T 2mad_H 128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDD---QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGL 203 (373)
T ss_pred cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEe---EEcCCCceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEe
Confidence 467788764 466653 57899999 9998765 312233333332222 445555 555555555533322
Q ss_pred ----------------------------------------------eeec------cccccCCCCccceEEEcCCCCEEE
Q 015220 354 ----------------------------------------------TSFE------DHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 354 ----------------------------------------------~s~e------~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
++++ ....|.|.- ...+++++||+.+.
T Consensus 204 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g-~~~~~~s~d~~~ly 282 (373)
T 2mad_H 204 VGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGG-WQQVAYLKSSDGIY 282 (373)
T ss_pred ccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCc-eEeEEECCCCCEEE
Confidence 1111 011112221 12367888988888
Q ss_pred EEecCCCCCccccCCceEEEeeecceeee
Q 015220 382 SYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 382 S~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
..+..........+.++|-+.|..|+|.+
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~vv 311 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQTS 311 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCEEE
Confidence 77654322222234578999999999874
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.14 E-value=0.00092 Score=68.73 Aligned_cols=242 Identities=11% Similarity=0.102 Sum_probs=138.2
Q ss_pred eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCCCCeEEeeCCCCeEEEeecCCCe-
Q 015220 138 VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKWPGFVEFDDVNGKVLTYSAQDSI- 216 (411)
Q Consensus 138 vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~- 216 (411)
.+.++-++...+.|.+++-...++-..|+ +-++.-|+.-.. .++...... +.|- +|+-|.|...+..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~-----v~dl~tg~~~~~--~~~~~k~~~---~~Ws--Dg~~l~y~~~~~~~ 197 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIH-----LMDVESKQPLET--PLKDVKFSG---ISWL--GNEGFFYSSYDKPD 197 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEE-----EEETTTCSEEEE--EEEEEESCC---CEEE--TTTEEEEEESSCCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEE-----EEECCCCCCCcc--ccCCceecc---EEEe--CCCEEEEEEecCcc
Confidence 56666677766666654433333222222 223333332000 111111223 3455 6677777776643
Q ss_pred ------------EEEEEeeCce----EEEEecc-C--ceeEEEEe-CCEEEEEEecCCC-ceeeEEEEecCCc-EEeEee
Q 015220 217 ------------YKVFDLKNYT----MLYSISD-K--NVQEIKIS-PGIMLLIFTKASG-HVPLKILSIEDGT-VLKSFN 274 (411)
Q Consensus 217 ------------ykVWdL~~Ys----~iysLs~-~--~VqeIkIS-dG~~Lai~q~t~~-~ipiKIl~I~tG~-~L~t~~ 274 (411)
+.+|++.+-+ ++++-.+ + .+..+..| ||..|++...... ..-+.++++.+++ ....
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~-- 275 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT-- 275 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE--
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE--
Confidence 7778887643 6788776 3 36788889 9998887765443 3478889999885 3333
Q ss_pred eccccCCcc-eeeeeecceeEEeec----CceeeEEEcccceE---EEeeccccCCCceEEE--EeeceeEEEEecC---
Q 015220 275 HLLHRNKKV-DFIEQFNEKLLVKQE----NENLQILDVRNFEL---TEVSRTEFMTPSAFIF--LYENQLFLTFRNR--- 341 (411)
Q Consensus 275 ~LL~h~K~I-~FLE~~~ekllIKQe----~~~LkI~dL~t~e~---~~v~~T~f~hpsAfif--Ly~sqlFlSfsd~--- 341 (411)
+..+.... ..+.-.++.+++... +.+|..+|+.+++. ..+-+ |+...+. ...+.|+++..++
T Consensus 276 -l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~----~~~~~~~~s~~g~~lv~~~~~~g~~ 350 (693)
T 3iuj_A 276 -VQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP----ERQQVLTVHSGSGYLFAEYMVDATA 350 (693)
T ss_dssp -EECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC----CCSSCEEEEEETTEEEEEEEETTEE
T ss_pred -EeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec----CCCCEEEEEEECCEEEEEEEECCee
Confidence 33333332 335555677776653 36789999998765 33222 2222222 2233566666444
Q ss_pred eEEEEecCCceeeeecc-ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 342 TVAVWNFRGELVTSFED-HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 342 tI~iWn~~Gel~~s~e~-H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.|.+|+++|...+.+.- +.. .+..+..++|++.++....+- ..-++|..+|+.+|+.
T Consensus 351 ~l~~~d~~g~~~~~l~~p~~~-----~~~~~~~~~d~~~l~~~~ss~------~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 351 RVEQFDYEGKRVREVALPGLG-----SVSGFNGKHDDPALYFGFENY------AQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEEEECTTSCEEEEECCSSSS-----EEEECCCCTTCSCEEEEEECS------SSCCEEEEECTTTCCE
T ss_pred EEEEEECCCCeeEEeecCCCc-----eEEeeecCCCCCEEEEEecCC------CCCCEEEEEECCCCeE
Confidence 79999999876665532 222 344445567877655444332 1226999999998875
No 209
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.11 E-value=0.00019 Score=73.18 Aligned_cols=187 Identities=9% Similarity=-0.001 Sum_probs=113.4
Q ss_pred CCCeEEEeecCCC---eEEEEEee--CceEEEEeccC---------ceeEEEEe-CCEEEEEEecCCC--ceeeEEEEec
Q 015220 203 VNGKVLTYSAQDS---IYKVFDLK--NYTMLYSISDK---------NVQEIKIS-PGIMLLIFTKASG--HVPLKILSIE 265 (411)
Q Consensus 203 ~NGkiLt~~~~ds---~ykVWdL~--~Ys~iysLs~~---------~VqeIkIS-dG~~Lai~q~t~~--~ipiKIl~I~ 265 (411)
++|+-+.+...+. ...+|-+. +.+ ...|.+. .+..+++| ||..||+...... ..-|+||++.
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQ-EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSC-CEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCC-cEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 4577666665543 35667665 232 2333321 48899999 9998887766554 4789999999
Q ss_pred CCcEE-eEeeeccccCCcceeeeeeccee--EEeecCc-------------eeeEEEcccceE--EEeeccccCCCceEE
Q 015220 266 DGTVL-KSFNHLLHRNKKVDFIEQFNEKL--LVKQENE-------------NLQILDVRNFEL--TEVSRTEFMTPSAFI 327 (411)
Q Consensus 266 tG~~L-~t~~~LL~h~K~I~FLE~~~ekl--lIKQe~~-------------~LkI~dL~t~e~--~~v~~T~f~hpsAfi 327 (411)
||+.+ .. .+...+ ...+.-++|+- +..+.+. .|.+||+.+++. ..+ -+.-.++..+.
T Consensus 156 tg~~~~~~---~~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv-~~~~~~~~~~~ 230 (695)
T 2bkl_A 156 SGEWSKVD---VIEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV-HERTGDPTTFL 230 (695)
T ss_dssp TCCBCSSC---CBSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE-ECCCCCTTCEE
T ss_pred CCCCcCCc---ccCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE-EecCCCCEEEE
Confidence 99986 32 222221 14567777753 4444433 399999999862 222 13445667777
Q ss_pred EEeec----eeEEEEecC----eEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceE
Q 015220 328 FLYEN----QLFLTFRNR----TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKL 399 (411)
Q Consensus 328 fLy~s----qlFlSfsd~----tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI 399 (411)
.+..+ .++++-.++ .|.+|+..+..++.+..|.. .... .+++||+++++ +..+ .++++|
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-----~~~~-~~~~~g~l~~~-s~~~------~~~~~l 297 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-----AKYE-VHAWKDRFYVL-TDEG------APRQRV 297 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-----CCEE-EEEETTEEEEE-ECTT------CTTCEE
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-----ceEE-EEecCCcEEEE-ECCC------CCCCEE
Confidence 77776 345554444 56666654334556666654 2222 23478884444 3322 356899
Q ss_pred EEeeeccee
Q 015220 400 FVSLLMFVT 408 (411)
Q Consensus 400 ~i~~i~tGk 408 (411)
.+||+.+|+
T Consensus 298 ~~~d~~~~~ 306 (695)
T 2bkl_A 298 FEVDPAKPA 306 (695)
T ss_dssp EEEBTTBCS
T ss_pred EEEeCCCCC
Confidence 999998875
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.06 E-value=0.0012 Score=61.08 Aligned_cols=192 Identities=6% Similarity=-0.067 Sum_probs=117.0
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+|.-+-||..++.++.....++.+.+||.++.+...--.++.+..+..+ +|.+++... . -|.+|+..+|+...-
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~~---~--gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIASD---D--GLFLRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEET---T--EEEEEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEEC---C--CEEEEECCCCcEEEE
Confidence 3444567877788888888888999999988664321224688999888 888766542 2 288899999986432
Q ss_pred eeecc-ccCCcceeeeeeccee-EEeecC-------ceeeEEEcccceEEEeeccccCCCceEEEEee-ceeEEEE-ecC
Q 015220 273 FNHLL-HRNKKVDFIEQFNEKL-LVKQEN-------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTF-RNR 341 (411)
Q Consensus 273 ~~~LL-~h~K~I~FLE~~~ekl-lIKQe~-------~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~-sqlFlSf-sd~ 341 (411)
....- .....++-+...+++- ++...+ ..|-.+| +++...+.. ....|....+-.. +.+|++- .++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~~~~~i~~s~dg~~lyv~~~~~~ 201 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DISIPNSICFSPDGTTGYFVDTKVN 201 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EESSEEEEEECTTSCEEEEEETTTC
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCcccCCeEEcCCCCEEEEEECCCC
Confidence 11100 1123466677777764 554322 3455555 676655422 2223333222111 2466665 467
Q ss_pred eEEEEecC---C-ce-----eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 342 TVAVWNFR---G-EL-----VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 342 tI~iWn~~---G-el-----~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.|.+|+++ | ++ +.++.++.. ..+.+++++||.+.++...+. .|..||. +|+.
T Consensus 202 ~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~-----~p~gi~~d~~G~lwva~~~~~----------~v~~~d~-~g~~ 262 (326)
T 2ghs_A 202 RLMRVPLDARTGLPTGKAEVFIDSTGIKG-----GMDGSVCDAEGHIWNARWGEG----------AVDRYDT-DGNH 262 (326)
T ss_dssp EEEEEEBCTTTCCBSSCCEEEEECTTSSS-----EEEEEEECTTSCEEEEEETTT----------EEEEECT-TCCE
T ss_pred EEEEEEcccccCCcccCceEEEECCCCCC-----CCCeeEECCCCCEEEEEeCCC----------EEEEECC-CCCE
Confidence 99999985 6 43 333433322 446799999999998865443 7888887 5654
No 211
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.06 E-value=0.0003 Score=72.43 Aligned_cols=188 Identities=16% Similarity=0.065 Sum_probs=118.6
Q ss_pred CCCeEEEeecCCCe---EEEEEeeCc----eEEEE------eccC---ceeEEEEe-CCEEEEEEecCCCc--eeeEEEE
Q 015220 203 VNGKVLTYSAQDSI---YKVFDLKNY----TMLYS------ISDK---NVQEIKIS-PGIMLLIFTKASGH--VPLKILS 263 (411)
Q Consensus 203 ~NGkiLt~~~~ds~---ykVWdL~~Y----s~iys------Ls~~---~VqeIkIS-dG~~Lai~q~t~~~--ipiKIl~ 263 (411)
++|+-+.+...++. ..+|.+..- ..... |+.. .+..+++| ||..||+....... .-|.||+
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 77887777766544 566776531 22222 2211 57789999 99988887665443 6799999
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeecc-eeEEeec--------------CceeeEEEcccceE--EEeeccccCCCceE
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFNE-KLLVKQE--------------NENLQILDVRNFEL--TEVSRTEFMTPSAF 326 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~e-kllIKQe--------------~~~LkI~dL~t~e~--~~v~~T~f~hpsAf 326 (411)
+.||+.+.. .++. -++..+.-++| .++.... ...|.+|++.+++. ..+ -+...+|..+
T Consensus 196 l~tg~~~~~---~~~~-~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv-~~~~~~~~~~ 270 (741)
T 1yr2_A 196 VADGKPLAD---ELKW-VKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV-FATPELPKRG 270 (741)
T ss_dssp TTTCCEEEE---EEEE-EESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE-ECCTTCTTCE
T ss_pred CCCCCCCCc---cCCC-ceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE-eccCCCCeEE
Confidence 999998764 1121 12234566676 3444443 33589999988762 222 1333456566
Q ss_pred EEEeec----eeEEEEecC-----eEEEEecC-Cc-e-eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCcccc
Q 015220 327 IFLYEN----QLFLTFRNR-----TVAVWNFR-GE-L-VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAE 394 (411)
Q Consensus 327 ifLy~s----qlFlSfsd~-----tI~iWn~~-Ge-l-~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~ 394 (411)
..+..+ .++++..++ .|.+||+. |+ . .+.+..+.. .. .-.+++||+.|+..+.+. .
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-----~~-~~~~~~dg~~l~~~s~~~------~ 338 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK-----AQ-WDFVDGVGDQLWFVSGDG------A 338 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-----SC-EEEEEEETTEEEEEECTT------C
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-----ce-EEEEeccCCEEEEEECCC------C
Confidence 666666 344444433 89999998 42 3 667776654 12 223579999999888764 4
Q ss_pred CCceEEEeeecce
Q 015220 395 GNGKLFVSLLMFV 407 (411)
Q Consensus 395 ~~gtI~i~~i~tG 407 (411)
.++.|.+||+.+|
T Consensus 339 ~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 339 PLKKIVRVDLSGS 351 (741)
T ss_dssp TTCEEEEEECSSS
T ss_pred CCCEEEEEeCCCC
Confidence 4688999999885
No 212
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.05 E-value=0.001 Score=69.39 Aligned_cols=267 Identities=13% Similarity=0.105 Sum_probs=153.3
Q ss_pred ccceehhhhccccceeeecccccEEEEEeCCCCc----------eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehh
Q 015220 104 ARDIVFALAQSGVCAAFCRETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIE 173 (411)
Q Consensus 104 a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e----------vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~ 173 (411)
+.+.|++-+..|.-.|+|..||+.+=........ +-+++-|. ++.|++.+ .| ..|.|--
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~---~d--g~l~alD---- 144 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGA---WD--GRLIALD---- 144 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEEC---TT--SEEEEEE----
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEc---CC--CEEEEEE----
Confidence 5788888888899999999999998877765431 23444442 23444322 11 2333321
Q ss_pred hhhhCCCCCCCcceeec----------ccCCCCeEEeeCCCCeEEEeecC-----CCeEEEEEeeCceEEEEeccC--c-
Q 015220 174 YIRRGKPDAGFALFESE----------SLKWPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISDK--N- 235 (411)
Q Consensus 174 ~i~~gk~~~~~~LF~~~----------~l~~PgfvEFDd~NGkiLt~~~~-----ds~ykVWdL~~Ys~iysLs~~--~- 235 (411)
.+-|+. +.+.. ....|- | .+|++++.... ++.+..||.+|.+.+-+.... .
T Consensus 145 -~~tG~~-----~W~~~~~~~~~~~~~~~~~p~-v----~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~ 213 (677)
T 1kb0_A 145 -AATGKE-----VWHQNTFEGQKGSLTITGAPR-V----FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDP 213 (677)
T ss_dssp -TTTCCE-----EEEEETTTTCCSSCBCCSCCE-E----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred -CCCCCE-----EeeecCCcCcCcCcccccCcE-E----ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCc
Confidence 122222 22211 111222 2 15777775542 789999999999988655421 1
Q ss_pred -------------------------------eeEEEEe--CCEEEEEEecCC-------------C---ceeeEEEEecC
Q 015220 236 -------------------------------VQEIKIS--PGIMLLIFTKAS-------------G---HVPLKILSIED 266 (411)
Q Consensus 236 -------------------------------VqeIkIS--dG~~Lai~q~t~-------------~---~ipiKIl~I~t 266 (411)
...+.++ .|+ |.+..... . ...|..||..|
T Consensus 214 ~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~-vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T 292 (677)
T 1kb0_A 214 SKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNT-MYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT 292 (677)
T ss_dssp TSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTE-EEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred cccccccccccccccccccCceeEeCCCcccccceeEcCCCCE-EEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC
Confidence 1234454 343 33332211 0 01389999999
Q ss_pred CcEEeEeeeccccC-------Ccceeeeee--c---ceeEEeecCceeeEEEcccceEEE-ee--cccc-------C---
Q 015220 267 GTVLKSFNHLLHRN-------KKVDFIEQF--N---EKLLVKQENENLQILDVRNFELTE-VS--RTEF-------M--- 321 (411)
Q Consensus 267 G~~L~t~~~LL~h~-------K~I~FLE~~--~---ekllIKQe~~~LkI~dL~t~e~~~-v~--~T~f-------~--- 321 (411)
|++++.+.. -+|. ...-..... + ..++..+.+..|.++|..||+.+- ++ +.-| +
T Consensus 293 G~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~ 371 (677)
T 1kb0_A 293 GKYKWHYQE-TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPI 371 (677)
T ss_dssp CCEEEEEES-STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEE
T ss_pred CCEEEEEec-CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCcee
Confidence 999998763 2221 112222221 1 345777788999999999999864 11 0000 0
Q ss_pred --------------CC------ce-EEEEe-eceeEEEE-e---------------------------------------
Q 015220 322 --------------TP------SA-FIFLY-ENQLFLTF-R--------------------------------------- 339 (411)
Q Consensus 322 --------------hp------sA-fifLy-~sqlFlSf-s--------------------------------------- 339 (411)
.| .+ -.++. ..+++++- .
T Consensus 372 ~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~ 451 (677)
T 1kb0_A 372 GIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPP 451 (677)
T ss_dssp ECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCC
T ss_pred eccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccC
Confidence 00 00 00111 11332221 1
Q ss_pred ----cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 340 ----NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 340 ----d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.++|..||+. |+++-++.-... .....++.+|++++.++.|. ++.+||..|||++
T Consensus 452 ~~~~~g~l~A~D~~tG~~~W~~~~~~~------~~~g~~~~~g~~v~~g~~dg----------~l~a~D~~tG~~l 511 (677)
T 1kb0_A 452 KSKPFGRLLAWDPVAQKAAWSVEHVSP------WNGGTLTTAGNVVFQGTADG----------RLVAYHAATGEKL 511 (677)
T ss_dssp CSCCEEEEEEEETTTTEEEEEEEESSS------CCCCEEEETTTEEEEECTTS----------EEEEEETTTCCEE
T ss_pred CCCCccEEEEEeCCCCcEEeecCCCCC------CcCcceEeCCCEEEEECCCC----------cEEEEECCCCcee
Confidence 2789999998 998887764332 23455777888999987775 9999999999986
No 213
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.03 E-value=0.005 Score=63.45 Aligned_cols=276 Identities=13% Similarity=0.085 Sum_probs=162.3
Q ss_pred cceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCC
Q 015220 105 RDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGF 184 (411)
Q Consensus 105 ~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~ 184 (411)
+-++++...+|.-+++|..|++.+-.|-... ..+.+-++...+.+.+.+ .|+ ....++ +..+ .+.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--~p~~v~~SpDGr~lyv~~---~dg----~V~viD---~~~~---t~~ 231 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIG---RDG----KVNMID---LWMK---EPT 231 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEECSS--CEEEEEECTTSCEEEEEE---TTS----EEEEEE---TTSS---SCC
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--CccceEECCCCCEEEEEc---CCC----eEEEEE---CCCC---CCc
Confidence 3466677788999999999999988886543 567888888777766543 122 223332 2100 111
Q ss_pred cceeecccCCCCeEEeeC---CCCe-EEEeecCCCeEEEEEeeCceEEEEecc------------C-ceeEEEEe-CCEE
Q 015220 185 ALFESESLKWPGFVEFDD---VNGK-VLTYSAQDSIYKVFDLKNYTMLYSISD------------K-NVQEIKIS-PGIM 246 (411)
Q Consensus 185 ~LF~~~~l~~PgfvEFDd---~NGk-iLt~~~~ds~ykVWdL~~Ys~iysLs~------------~-~VqeIkIS-dG~~ 246 (411)
.+-+-..=..|--+.|+. ++|+ +.+.+-.++++.|||..+.+.+..++- + .|..|..| ++-.
T Consensus 232 ~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 232 TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred EeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE
Confidence 122222234588899997 7885 566666789999999999999988761 1 56777777 3222
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEcccceEEEeecc--ccC
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRNFELTEVSRT--EFM 321 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t~e~~~v~~T--~f~ 321 (411)
+.+.....+ -|.+++..+.+.++.... ...+..+-+...+++ +++. +.+++|.++|+.+++....-.+ .-.
T Consensus 312 ~vv~~~~~g--~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P 387 (567)
T 1qks_A 312 FIVNVKETG--KILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP 387 (567)
T ss_dssp EEEEETTTT--EEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB
T ss_pred EEEEecCCC--eEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC
Confidence 222222222 233344443332222111 111122223445544 4554 4789999999999998763333 334
Q ss_pred CC-ceEEEEe--eceeEEEE--ecCeEEEEecCC--------ceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCC
Q 015220 322 TP-SAFIFLY--ENQLFLTF--RNRTVAVWNFRG--------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADS 388 (411)
Q Consensus 322 hp-sAfifLy--~sqlFlSf--sd~tI~iWn~~G--------el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~ 388 (411)
|| ....|.. ...+|+|. .+++|.|++.+. ..++++...-. ----|..+||+..+..-..-.+
T Consensus 388 hpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~-----g~~~i~~~p~~~~l~v~~~~~~ 462 (567)
T 1qks_A 388 HPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG-----GSLFIKTHPNSQYLYVDATLNP 462 (567)
T ss_dssp CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS-----CCCCEECCTTCSEEEEECTTCS
T ss_pred CCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCC-----CCEEEEeCCCCCeEEEecCCCC
Confidence 66 3444444 24677776 578999999873 36667665421 1012446888887765443221
Q ss_pred CCccccCCceEEEeeecce
Q 015220 389 DDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 389 ~~~~~~~~gtI~i~~i~tG 407 (411)
+ .+...+|-++|+.|.
T Consensus 463 ~---~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 463 E---AEISGSVAVFDIKAM 478 (567)
T ss_dssp S---HHHHTCEEEEEGGGC
T ss_pred C---cccCceEEEEECCcc
Confidence 0 012358888888876
No 214
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.99 E-value=0.0023 Score=56.78 Aligned_cols=197 Identities=11% Similarity=0.002 Sum_probs=127.4
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
.++|--+.+|..++++.+.....+.+.++|+.+......+.. .....+.++ ++-.|.+.+...++ |.++++. |+
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~--I~~~~~~-g~ 111 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDR--IEVAKMD-GT 111 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTE--EEEEETT-SC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCE--EEEEEcC-CC
Confidence 467899999999999999999999999999987654333433 478889998 45455666655554 4566764 43
Q ss_pred EEeEeeeccccC-Ccceeeeeec--ceeEEeecC---ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-ec
Q 015220 269 VLKSFNHLLHRN-KKVDFIEQFN--EKLLVKQEN---ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-RN 340 (411)
Q Consensus 269 ~L~t~~~LL~h~-K~I~FLE~~~--ekllIKQe~---~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-sd 340 (411)
....+ +... ....-|++.+ +.+++...+ +.|..+++.......+..+.+..|..+.+=. ...+|++= .+
T Consensus 112 ~~~~~---~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 112 QRRVL---FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp SCEEE---ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CEEEE---EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 33331 1111 3346688875 567777754 6888888865444444444556777765543 34788887 67
Q ss_pred CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 341 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 341 ~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|.+++++|.-++.+-.. +.+| ..+++ |++.|.-.... +++|.+.|..|||.+
T Consensus 189 ~~I~~~~~~g~~~~~~~~~-~~~P----~gi~~--d~~~lyva~~~---------~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 189 HRAECLNPAQPGRRKVLEG-LQYP----FAVTS--YGKNLYYTDWK---------TNSVIAMDLAISKEM 242 (267)
T ss_dssp TEEEEEETTEEEEEEEEEC-CCSE----EEEEE--ETTEEEEEETT---------TTEEEEEETTTTEEE
T ss_pred CEEEEEecCCCceEEEecC-CCCc----eEEEE--eCCEEEEEECC---------CCeEEEEeCCCCCce
Confidence 8999999997654444322 3333 34444 45555443322 358999999888864
No 215
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.98 E-value=0.00094 Score=64.00 Aligned_cols=179 Identities=12% Similarity=0.102 Sum_probs=123.4
Q ss_pred EEeeCCCCeEEEeecCC--CeEEEEEeeCceEEEEeccC-c-e-eEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 198 VEFDDVNGKVLTYSAQD--SIYKVFDLKNYTMLYSISDK-N-V-QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~d--s~ykVWdL~~Ys~iysLs~~-~-V-qeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+||+ +|....+.+.+ |.++++|+++.+.+.++.-. + + .-+.+.++.+. +-+...--+-++|.+|++++.+
T Consensus 48 L~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly---~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 48 FFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIV---GLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEE---EEESSSSEEEEEETTTCCEEEE
T ss_pred EEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEE---EEEeeCCEEEEEECccCcEEEE
Confidence 4788 47888877775 59999999999999887622 2 3 33666665532 2343344567999999999999
Q ss_pred eeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eeccccCCC----ceEEEEeeceeEEEE-ecCeEEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEFMTP----SAFIFLYENQLFLTF-RNRTVAVW 346 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f~hp----sAfifLy~sqlFlSf-sd~tI~iW 346 (411)
|..- .+=--+.--+..+++..+++.|..+|-.|.+... |+-+.-+.| ...-+. ..++|+.. .+++|.+-
T Consensus 123 i~~~----~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vI 197 (262)
T 3nol_A 123 FNYD----GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRI 197 (262)
T ss_dssp EECS----SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EECC----CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEE
Confidence 7742 1112233334445666678899999999977665 333322222 222332 45899888 78999999
Q ss_pred ecC-CceeeeeccccccC-------CCCccceEEEcCCCCEEEEEecC
Q 015220 347 NFR-GELVTSFEDHLLWH-------PDCNTNNIYITSDQDLIISYCKA 386 (411)
Q Consensus 347 n~~-Gel~~s~e~H~~~~-------~~c~~n~i~Is~Dqd~iiS~~~d 386 (411)
|++ |+.+.+++-.-+.. ++-.-|-|+.+|+++.++.-+|-
T Consensus 198 Dp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 198 DPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp CTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred ECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 999 99998777654431 12366999999999999998886
No 216
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.97 E-value=0.0013 Score=62.11 Aligned_cols=178 Identities=12% Similarity=0.077 Sum_probs=127.8
Q ss_pred EEeeCCCCeEEEeecC--CCeEEEEEeeCceEEEEec--cCce-eEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 198 VEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS--DKNV-QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~--ds~ykVWdL~~Ys~iysLs--~~~V-qeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+|||+ |+...+.+. +|.++++|+++.+.+.++. +.-+ .-+.+.++.+..+ +-..--+-++|.+|++++.+
T Consensus 26 L~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~l---tw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 26 LFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQL---TWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp EEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEE---ESSSSEEEEEETTTTEEEEE
T ss_pred EEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEE---EeeCCEEEEEECCcCcEEEE
Confidence 58997 788888887 4799999999999998876 2222 3466666664333 33333467999999999999
Q ss_pred eeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eeccccCCCceEEEEe-----eceeEEEE-ecCeEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEFMTPSAFIFLY-----ENQLFLTF-RNRTVAV 345 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy-----~sqlFlSf-sd~tI~i 345 (411)
|..- .+=--|.--+..+++..++++|.++|-.|.+... +.-+ .++..+-++. ..++|+.. .++.|.+
T Consensus 101 i~~~----~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~--~~g~~~~~lNeLe~~~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 101 FRYP----GEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT--AGGRPLDNLNELEWVNGELLANVWLTSRIAR 174 (243)
T ss_dssp EECS----SCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECE--ETTEECCCEEEEEEETTEEEEEETTTTEEEE
T ss_pred EeCC----CCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc--cCCcccccceeeEEeCCEEEEEECCCCeEEE
Confidence 8742 1223344445667888899999999999977665 3223 3666666653 33889888 7889999
Q ss_pred EecC-Cceeeeecccccc--------CCCCccceEEEcCCCCEEEEEecC
Q 015220 346 WNFR-GELVTSFEDHLLW--------HPDCNTNNIYITSDQDLIISYCKA 386 (411)
Q Consensus 346 Wn~~-Gel~~s~e~H~~~--------~~~c~~n~i~Is~Dqd~iiS~~~d 386 (411)
-|++ |+.+..+.=.-+. ..+-..|-|+.+|+++.|+.-.|-
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 9999 9988876644332 123467999999999988877664
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.96 E-value=0.00075 Score=62.75 Aligned_cols=159 Identities=10% Similarity=0.117 Sum_probs=100.9
Q ss_pred eEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee----eccccCCcceeeeeecce-eEEeec-
Q 015220 226 TMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN----HLLHRNKKVDFIEQFNEK-LLVKQE- 298 (411)
Q Consensus 226 s~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~----~LL~h~K~I~FLE~~~ek-llIKQe- 298 (411)
+.+.+.. .....|.++ +|.+++....-+... .+||.+.+|++. .+- ..-++...++-|.+.+++ |++...
T Consensus 10 ~~v~~~~-~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 10 EVVAELS-LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp EEEEEES-SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred EEEEEcC-CCcceEEECCCCCEEEEeCCCCCCc-eEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCC
Confidence 4444444 578899999 787665544333223 777777788754 221 011344567778888755 566543
Q ss_pred -----CceeeEEEcccceEEE-e--ecccc---CCCceEEEEe-eceeEEEEe----cCeEEEEecC-Cceeeeeccccc
Q 015220 299 -----NENLQILDVRNFELTE-V--SRTEF---MTPSAFIFLY-ENQLFLTFR----NRTVAVWNFR-GELVTSFEDHLL 361 (411)
Q Consensus 299 -----~~~LkI~dL~t~e~~~-v--~~T~f---~hpsAfifLy-~sqlFlSfs----d~tI~iWn~~-Gel~~s~e~H~~ 361 (411)
+++|.+||+.+++... + +.... ..|..+.+=. ...+|++-. ++.|.+||+. |++.+.+.+|..
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~ 166 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG 166 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc
Confidence 4799999999998554 2 21111 1223332221 236788864 6799999998 888888887644
Q ss_pred cCCC------------------------CccceEEEcCCCCEEEEEecCC
Q 015220 362 WHPD------------------------CNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 362 ~~~~------------------------c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
..|+ ...|.|++||||+.+.....+.
T Consensus 167 ~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~ 216 (343)
T 2qe8_A 167 IAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS 216 (343)
T ss_dssp TSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC
T ss_pred ccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC
Confidence 3321 2368899999999887776553
No 218
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.93 E-value=0.005 Score=56.84 Aligned_cols=225 Identities=11% Similarity=0.106 Sum_probs=132.3
Q ss_pred EeeccceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCC
Q 015220 101 IVAARDIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKP 180 (411)
Q Consensus 101 Iv~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~ 180 (411)
.+...+.|++-+..|.-.|||..||+.+=...... ++..+.... ++.+++.+ .+ ..|.|-.. .-|+
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~--~~~v~v~~---~~--g~l~~~d~-----~tG~- 164 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVVS--DGLVLIHT---SN--GQLQALNE-----ADGA- 164 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEEE--TTEEEEEC---TT--SEEEEEET-----TTCC-
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEEE--CCEEEEEc---CC--CeEEEEEC-----CCCc-
Confidence 34557888888888989999999999776555432 222222222 23444322 11 12333221 1122
Q ss_pred CCCCcceeecc---------cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc------------e-eE
Q 015220 181 DAGFALFESES---------LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN------------V-QE 238 (411)
Q Consensus 181 ~~~~~LF~~~~---------l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~------------V-qe 238 (411)
.+..... ...|- .+ +|.+++ ...++.+..+|.++.+.+.+..... + ..
T Consensus 165 ----~~W~~~~~~~~~~~~~~~~~~---~~--~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~ 234 (376)
T 3q7m_A 165 ----VKWTVNLDMPSLSLRGESAPT---TA--FGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTT 234 (376)
T ss_dssp ----EEEEEECCC-----CCCCCCE---EE--TTEEEE-CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCC
T ss_pred ----EEEEEeCCCCceeecCCCCcE---EE--CCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCC
Confidence 2222110 11221 22 455544 4557788888998888886654221 1 22
Q ss_pred EEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeecc
Q 015220 239 IKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRT 318 (411)
Q Consensus 239 IkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T 318 (411)
..+.+|.+++... .-.+..++..||+++++... ....-+...++.+++...+..|..+|..+|+..--...
T Consensus 235 p~~~~~~v~~~~~----~g~l~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~ 305 (376)
T 3q7m_A 235 PVVVNGVVFALAY----NGNLTALDLRSGQIMWKREL-----GSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSD 305 (376)
T ss_dssp CEEETTEEEEECT----TSCEEEEETTTCCEEEEECC-----CCEEEEEEETTEEEEEETTCCEEEEETTTCCEEEEECT
T ss_pred cEEECCEEEEEec----CcEEEEEECCCCcEEeeccC-----CCCCCceEECCEEEEEcCCCeEEEEECCCCcEEEeecc
Confidence 3345676555432 22578899999999988542 22344677889999999999999999999987542111
Q ss_pred ccCCCceEEEEeeceeEEEEecCeEEEEecC-Cceeeeecc
Q 015220 319 EFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFED 358 (411)
Q Consensus 319 ~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~ 358 (411)
.-.....-..++...+|+.-.++.+.++|.+ |+++.+++-
T Consensus 306 ~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 306 LLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 1111111122345577776688999999988 998876654
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.90 E-value=0.0015 Score=59.16 Aligned_cols=198 Identities=13% Similarity=0.128 Sum_probs=124.3
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceE--EEEecc----CceeEEEEe-CCEEEEEEecCCC------ceeeE
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISD----KNVQEIKIS-PGIMLLIFTKASG------HVPLK 260 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs~----~~VqeIkIS-dG~~Lai~q~t~~------~ipiK 260 (411)
.|+.+-|| ++|+.++.. ++.+.+||.++.+. +..... ..+.+++++ +|.+++....... .-.-+
T Consensus 55 ~~~~i~~~-~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 55 PVSSVALR-QSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp CEEEEEEB-TTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred ceEEEEEC-CCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 57777786 577766654 56788899987664 333321 257889999 8886664432211 12346
Q ss_pred EEEec-CCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEc--ccceEEE--eec---cccCCCceEEEE
Q 015220 261 ILSIE-DGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDV--RNFELTE--VSR---TEFMTPSAFIFL 329 (411)
Q Consensus 261 Il~I~-tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL--~t~e~~~--v~~---T~f~hpsAfifL 329 (411)
||.+. +|+...- ...-...+-|..++++ +++. +.++.|.+||+ .+|++.. +-. ...+.|..+.+=
T Consensus 132 l~~~d~~g~~~~~----~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 132 LYSLFPDHHVKKY----FDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp EEEECTTSCEEEE----EEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred EEEEECCCCEEEE----eeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 77776 4554332 2222345668888765 4444 45788999998 5665421 111 122355554433
Q ss_pred eeceeEEEE-ecCeEEEEecC-CceeeeeccccccCCCCccceEEEc-CCCCEEEEEecCCCCCc--c--ccCCceEEEe
Q 015220 330 YENQLFLTF-RNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISYCKADSDDP--L--AEGNGKLFVS 402 (411)
Q Consensus 330 y~sqlFlSf-sd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is-~Dqd~iiS~~~d~~~~~--~--~~~~gtI~i~ 402 (411)
...+++++- .++.|..||+. |+++..+.-+.. ...+++.+ ||++.|.-.+.....+. . ....|.+-.+
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~-----~~t~~~f~g~d~~~L~vt~~~~~~~~~~~~~~p~~G~~f~~ 282 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVD-----KTTSCCFGGKNYSEMYVTCARDGMDPEGLLRQPEAGGIFKI 282 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSS-----BEEEEEEESGGGCEEEEEEBCTTCCHHHHHHCTTTTCEEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCC-----CceEEEEeCCCCCEEEEEcCCcCCChhHccCCCCCceEEEe
Confidence 334888887 56789999998 999999877654 67788888 89998887777653221 1 1224877666
Q ss_pred e
Q 015220 403 L 403 (411)
Q Consensus 403 ~ 403 (411)
+
T Consensus 283 ~ 283 (297)
T 3g4e_A 283 T 283 (297)
T ss_dssp E
T ss_pred c
Confidence 4
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.89 E-value=0.0041 Score=64.94 Aligned_cols=55 Identities=5% Similarity=0.027 Sum_probs=44.2
Q ss_pred cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 340 NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++|..||+. |+++-++..|..+ +.-.++..+.+++.|+.|. .+..||..|||.+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~------~~g~~~tagglvf~gt~dg----------~l~a~D~~tG~~l 509 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIF------NGGTLSTAGNLVFEGSADG----------RVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSC------CCCEEEETTTEEEEECTTS----------EEEEEETTTCCEE
T ss_pred ceeEEEEECCCCCeEeEccCCCCc------cCccceECCCEEEEECCCC----------cEEEEECCCCccc
Confidence 4889999998 9999888776542 2235566788999998875 9999999999986
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.89 E-value=0.0068 Score=57.59 Aligned_cols=182 Identities=12% Similarity=0.027 Sum_probs=127.7
Q ss_pred EEeeCCCCeEEEeecC--CCeEEEEEeeCceEEEEec--cC-ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 198 VEFDDVNGKVLTYSAQ--DSIYKVFDLKNYTMLYSIS--DK-NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~--ds~ykVWdL~~Ys~iysLs--~~-~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
++||+ +|+..++.++ ++.+.++|+.+.+.+.++. +. ....+.+.++.+ .+..-..+. +-++|..|++++.+
T Consensus 26 l~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~l-yv~t~~~~~--v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 26 LVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKL-YQVVWLKNI--GFIYDRRTLSNIKN 101 (266)
T ss_dssp EEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEE-EEEETTCSE--EEEEETTTTEEEEE
T ss_pred EEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEE-EEEEecCCE--EEEEECCCCcEEEE
Confidence 77874 4888887765 7999999999999998875 33 444577776653 333444444 67799999999999
Q ss_pred eeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eeccccC----CCceEEEEeeceeEEEE-ecCeEEEE
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEFM----TPSAFIFLYENQLFLTF-RNRTVAVW 346 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f~----hpsAfifLy~sqlFlSf-sd~tI~iW 346 (411)
+.. + ..+---|..-+..+++..+++.|.++|..+.+... |+-+.-+ .|.++.+. ..++|++- .+++|.+=
T Consensus 102 i~~--g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 102 FTH--Q-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEC--C-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEC--C-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 653 3 12222245456678888899999999999977555 3322211 24455555 45899888 78999999
Q ss_pred ecC-Cceeeeecccc--------ccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 347 NFR-GELVTSFEDHL--------LWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 347 n~~-Gel~~s~e~H~--------~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
|+. |+.+.++.=.- .-.+.-..|-|+++||++.++..++.-
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~ 227 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLW 227 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCC
Confidence 998 99888775221 111223668999999999888888764
No 222
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.86 E-value=0.014 Score=58.23 Aligned_cols=267 Identities=12% Similarity=0.100 Sum_probs=153.9
Q ss_pred cccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCccee---ec
Q 015220 114 SGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFE---SE 190 (411)
Q Consensus 114 sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~---~~ 190 (411)
+|.-.++|..|++.+-.|-.+..- + +-++.....+.+.+.+.+.....=.--.++.=|...++.-..-++-. ..
T Consensus 58 ~~~V~ViD~~t~~v~~~I~vG~~P--~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~ 134 (386)
T 3sjl_D 58 VTQQFVIDGEAGRVIGMIDGGFLP--N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFL 134 (386)
T ss_dssp SEEEEEEETTTTEEEEEEEECSSC--E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC
T ss_pred CCEEEEEECCCCeEEEEEECCCCC--c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccc
Confidence 477888999999999888775543 5 88888888877766543211000000011111222111100000000 00
Q ss_pred ccCCCCeEEeeCCCCeEEEeecC-CCeEEEEEeeCceEEEEeccCce---eE------EEEe-CCEEEEEEecCCCceee
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISDKNV---QE------IKIS-PGIMLLIFTKASGHVPL 259 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~-ds~ykVWdL~~Ys~iysLs~~~V---qe------IkIS-dG~~Lai~q~t~~~ipi 259 (411)
.-.+|.-+.|+.-..++.+++.. ++++.|+|+.+.+.+.+|.-... .- +.+| ||.++.+...+.+++
T Consensus 135 ~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-- 212 (386)
T 3sjl_D 135 VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-- 212 (386)
T ss_dssp BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCC--
T ss_pred cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeE--
Confidence 12489999998666667777654 78999999999999988852211 10 2444 666555555443333
Q ss_pred EEEEecCCcEEeEeeeccccCCccee--eee-ecc-eeEEeecCceeeEEEcccceEEEeeccc-cC--------CCceE
Q 015220 260 KILSIEDGTVLKSFNHLLHRNKKVDF--IEQ-FNE-KLLVKQENENLQILDVRNFELTEVSRTE-FM--------TPSAF 326 (411)
Q Consensus 260 KIl~I~tG~~L~t~~~LL~h~K~I~F--LE~-~~e-kllIKQe~~~LkI~dL~t~e~~~v~~T~-f~--------hpsAf 326 (411)
..+....+...+..-| .+. ..+ +++.-+.+..+.+.|+.++....+.+.. |. .|...
T Consensus 213 ----------~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~ 282 (386)
T 3sjl_D 213 ----------EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 282 (386)
T ss_dssp ----------EEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred ----------EEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCc
Confidence 2111111111111111 122 133 4666777788999999887654432221 21 23322
Q ss_pred EEEe----eceeEEEEe----------cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCC-EEEEEecCCCCC
Q 015220 327 IFLY----ENQLFLTFR----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCKADSDD 390 (411)
Q Consensus 327 ifLy----~sqlFlSfs----------d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~d~~~~ 390 (411)
--++ .+.+|++-. .++|.+-|+. ++.++++.--. ..+.+++|+||+ +|+..+-.
T Consensus 283 q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~------~~~~lavs~D~~~~ly~tn~~---- 352 (386)
T 3sjl_D 283 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH------EIDSINVSQDEKPLLYALSTG---- 352 (386)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE------EECEEEECSSSSCEEEEEETT----
T ss_pred ceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC------CcceEEECCCCCeEEEEEcCC----
Confidence 2222 338888864 3678899998 99988765321 357899999997 77766532
Q ss_pred ccccCCceEEEeeecceeee
Q 015220 391 PLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 391 ~~~~~~gtI~i~~i~tGk~~ 410 (411)
.|+|-+.|..|||.+
T Consensus 353 -----~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 353 -----DKTLYIHDAESGEEL 367 (386)
T ss_dssp -----TTEEEEEETTTCCEE
T ss_pred -----CCeEEEEECCCCcEE
Confidence 259999999999975
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.84 E-value=0.013 Score=58.96 Aligned_cols=270 Identities=12% Similarity=0.054 Sum_probs=152.0
Q ss_pred ccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCC-----Ccceee
Q 015220 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAG-----FALFES 189 (411)
Q Consensus 115 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~-----~~LF~~ 189 (411)
|.-.++|..|++.+-.|-.+..- -|-++.....|.+.+.+.+..+..=.-..+..=|...++.-.. .+-|.
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P---gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~- 174 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP---HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFL- 174 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC---EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCC-
T ss_pred CeEEEEECCCCEEEEEEECCCCC---ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccc-
Confidence 67889999999999888876543 5778888887777654322110000001122112222221000 00111
Q ss_pred cccCCCCeEEeeCCCCeEEEeecC-CCeEEEEEeeCceEEEEeccCceeEEEEe-CC-EEEEEEecCCCceeeEEEEecC
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQ-DSIYKVFDLKNYTMLYSISDKNVQEIKIS-PG-IMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~-ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG-~~Lai~q~t~~~ipiKIl~I~t 266 (411)
....|.-+-|+.-..++.+.+.. ++++-|.|+++.+.+.+|.-... ..+. +| ..++...+....++ .++.+
T Consensus 175 -~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~---V~~~~ 248 (426)
T 3c75_H 175 -VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLAR---VDFAD 248 (426)
T ss_dssp -BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEE---EECCT
T ss_pred -cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEE---EECCC
Confidence 13568999998776677777654 78999999999999887763221 1111 01 11111222222222 22245
Q ss_pred CcEEeEeeeccccCCcceee----eeecceeEEeecCceeeEEEcccceEEEeec-c--------ccCCCce--EEEEe-
Q 015220 267 GTVLKSFNHLLHRNKKVDFI----EQFNEKLLVKQENENLQILDVRNFELTEVSR-T--------EFMTPSA--FIFLY- 330 (411)
Q Consensus 267 G~~L~t~~~LL~h~K~I~FL----E~~~ekllIKQe~~~LkI~dL~t~e~~~v~~-T--------~f~hpsA--fifLy- 330 (411)
|++.......+.-.+..-|+ ..-+..+++-..+..+-+.|+.+++...+.. + ....|.. .+.+.
T Consensus 249 ~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~ 328 (426)
T 3c75_H 249 GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR 328 (426)
T ss_dssp TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG
T ss_pred CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC
Confidence 54443210000000111111 1123455555667789999998765443221 0 0012322 13333
Q ss_pred -eceeEEEEe----------cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCC-EEEEEec-CCCCCccccCC
Q 015220 331 -ENQLFLTFR----------NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYCK-ADSDDPLAEGN 396 (411)
Q Consensus 331 -~sqlFlSfs----------d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~~-d~~~~~~~~~~ 396 (411)
.+.+|++-. +++|.+.|+. ++.++++.--. .-..|++||||+ ++++.+- +.
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~------~P~gia~spDg~~~lyv~n~~s~--------- 393 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH------EIDSINVSQDAEPLLYALSAGTQ--------- 393 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE------EECEEEECCSSSCEEEEEETTTT---------
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC------CcCeEEEccCCCEEEEEEcCCCC---------
Confidence 237888864 4689999999 99999885322 357899999999 9998884 54
Q ss_pred ceEEEeeecceeee
Q 015220 397 GKLFVSLLMFVTCK 410 (411)
Q Consensus 397 gtI~i~~i~tGk~~ 410 (411)
+|-+.|..|+|.+
T Consensus 394 -~VsVID~~t~kvv 406 (426)
T 3c75_H 394 -TLHIYDAATGEEL 406 (426)
T ss_dssp -EEEEEETTTCCEE
T ss_pred -eEEEEECCCCCEE
Confidence 9999999999975
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.78 E-value=2.2e-05 Score=74.90 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=64.6
Q ss_pred eeEEEEecCCcEEeEeeeccccCCcceeeeee-cceeEEe-ecCceeeEEEcccceEEEeeccccCCCc----eEEEEee
Q 015220 258 PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF-NEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPS----AFIFLYE 331 (411)
Q Consensus 258 piKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~-~ekllIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hps----AfifLy~ 331 (411)
.|..||.+||++++++.. .++...-.. ++.+++. ..+..|.+||..+|+.... ..+..+. +......
T Consensus 20 ~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~--~~~~~~~~~~~sp~~~~~ 92 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTK--LPFTIPELVQASPCRSSD 92 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEE--CSCCHHHHHTTCSCC---
T ss_pred EEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeee--eeccCccccccCceEecC
Confidence 588999999999999763 233333333 4446665 5889999999999886431 1111111 1111133
Q ss_pred ceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 332 NQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 332 sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
..+|+...++++..||.+ |+++-+++.|.. +..+|+++.++.++.|. +|..||..||+++
T Consensus 93 ~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---------~~~~p~~~~v~~~~~dg----------~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 93 GILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---------DSLSPSTSLLYLGRTEY----------TITMYDTKTRELR 153 (369)
T ss_dssp --CCCCEEEEEEEEECCC-------------------------------EEEEEEEE----------EEECCCSSSSSCC
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEecCCCc---------ccccccCCEEEEEecCC----------EEEEEECCCCCEE
Confidence 455655589999999999 999888876642 35677999999998775 9999999999864
No 225
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.77 E-value=0.0093 Score=54.48 Aligned_cols=194 Identities=11% Similarity=0.096 Sum_probs=117.0
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
.+|.-+-+|. +|++.+....++.+.+||..+ +....+. ......+.++ +|.+ .+.+...+..-+-.++..+|++.
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l-~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDL-VATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCE-EEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcE-EEEeccCCcceEEEEcCCCCeEE
Confidence 5788888987 899999888888888888876 3332222 4578889998 7874 44443333334555677899875
Q ss_pred eEeeeccccCCcceeeeeecce-eEEee-cCceeeEEEcccce--EEEe--------eccccCCCceEEEEeeceeEEEE
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEK-LLVKQ-ENENLQILDVRNFE--LTEV--------SRTEFMTPSAFIFLYENQLFLTF 338 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ek-llIKQ-e~~~LkI~dL~t~e--~~~v--------~~T~f~hpsAfifLy~sqlFlSf 338 (411)
.-.. + +..+-.+-+....+. +++.. .+..|..+|..+++ .+.. ....+..|..+ .-....+|++=
T Consensus 109 ~~~~-~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg~~lyv~d 185 (306)
T 2p4o_A 109 TLLT-L-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFGNFLYVSN 185 (306)
T ss_dssp EEEE-C-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEETTEEEEEE
T ss_pred EEEe-C-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCCCEEEEEe
Confidence 4322 1 221222333334444 35554 47788888987653 3221 11234456665 33334678887
Q ss_pred -ecCeEEEEecCC--ce--eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 339 -RNRTVAVWNFRG--EL--VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 339 -sd~tI~iWn~~G--el--~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.+++|..+++++ .+ ...+.. .-.-..+++++||.+.++-... +.|.++|.. |++
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~------~~~P~gi~vd~dG~l~va~~~~----------~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVE------QTNIDDFAFDVEGNLYGATHIY----------NSVVRIAPD-RST 244 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEE------SCCCSSEEEBTTCCEEEECBTT----------CCEEEECTT-CCE
T ss_pred CCCCEEEEEEeCCCCCCCccEEEec------cCCCCCeEECCCCCEEEEeCCC----------CeEEEECCC-CCE
Confidence 678999999984 32 112211 1245779999999887765433 366666653 543
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.76 E-value=0.0012 Score=63.63 Aligned_cols=177 Identities=12% Similarity=0.098 Sum_probs=125.1
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCc-e-eEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeee
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-V-QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-V-qeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~ 275 (411)
++||+ ++...+.+.++.++++|+++.+.+.++-+.+ + .-+.+.++.+ ++-+..---+-++|.+|++++++|..
T Consensus 60 L~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~L---y~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 60 LVFHQ--GHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERL---YQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp EEEET--TEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCE---EEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEE---EEEEccCCEEEEEECCcCcEEEEEeC
Confidence 57884 8899999999999999999999887763333 2 3366665543 22343444578999999999999774
Q ss_pred ccccCCcceeeeeecceeEEeecCceeeEEEcccceEEE-eeccccCCCceEEEEe-----eceeEEEE-ecCeEEEEec
Q 015220 276 LLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTE-VSRTEFMTPSAFIFLY-----ENQLFLTF-RNRTVAVWNF 348 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy-----~sqlFlSf-sd~tI~iWn~ 348 (411)
- .+=--+.--+..+++..+++.|.++|-.|.+... +.-+. +|..+.++. ..++|+.. .+++|.+=|+
T Consensus 135 ~----~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~--~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 135 S----GEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL--RGQPVELINELECANGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp S----SCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEE--TTEECCCEEEEEEETTEEEEEETTCSEEEEECT
T ss_pred C----CceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC--CCcccccccccEEeCCEEEEEECCCCeEEEEeC
Confidence 1 2222344445556777779999999999987766 32222 556655443 34889888 7889999999
Q ss_pred C-Cceeeeeccccc--------cCCCCccceEEEcCCCCEEEEEec
Q 015220 349 R-GELVTSFEDHLL--------WHPDCNTNNIYITSDQDLIISYCK 385 (411)
Q Consensus 349 ~-Gel~~s~e~H~~--------~~~~c~~n~i~Is~Dqd~iiS~~~ 385 (411)
+ |+.+.+++=.-+ ..++-.-|-||.+|+++.|+.-.|
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9 998886665422 123457799999999887776554
No 227
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.67 E-value=0.01 Score=54.85 Aligned_cols=182 Identities=10% Similarity=-0.013 Sum_probs=110.8
Q ss_pred CCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEE--Eec----cCceeEEEEe-CCEEEEEEecCC-CceeeEEEEec
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLY--SIS----DKNVQEIKIS-PGIMLLIFTKAS-GHVPLKILSIE 265 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iy--sLs----~~~VqeIkIS-dG~~Lai~q~t~-~~ipiKIl~I~ 265 (411)
.|..+-|| ++|++++.. +.-+.+||.++.+... ... ...+.++.++ +|.+++.....+ ..-...||.+.
T Consensus 91 ~v~~i~~~-~dg~l~v~~--~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 91 MGSALAKI-SDSKQLIAS--DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp CEEEEEEE-ETTEEEEEE--TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred cceEEEEe-CCCeEEEEE--CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 46667776 468877765 3447888988776432 221 1258889999 787655433211 11224566665
Q ss_pred CCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEcc--cc-eEE---Eee--ccccCCCceEEEEeecee
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVR--NF-ELT---EVS--RTEFMTPSAFIFLYENQL 334 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~--t~-e~~---~v~--~T~f~hpsAfifLy~sql 334 (411)
+|+...- .......+-+..++++ +++. +.++.|.+||+. +| +.. .+. ......|..+.+-....+
T Consensus 168 ~g~~~~~----~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l 243 (326)
T 2ghs_A 168 KGKVTKL----FADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI 243 (326)
T ss_dssp TTEEEEE----EEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE
T ss_pred CCcEEEe----eCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE
Confidence 6765432 2222345667788765 5454 456899999986 66 321 111 111234444333223367
Q ss_pred EEEE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEc-CCCCEEEEEecCC
Q 015220 335 FLTF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYIT-SDQDLIISYCKAD 387 (411)
Q Consensus 335 FlSf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is-~Dqd~iiS~~~d~ 387 (411)
+++- .++.|..|++.|++++++..+.. .+..++++ +|++.|+..+...
T Consensus 244 wva~~~~~~v~~~d~~g~~~~~i~~~~~-----~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 244 WNARWGEGAVDRYDTDGNHIARYEVPGK-----QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEETTTEEEEECTTCCEEEEEECSCS-----BEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEeCCCEEEEECCCCCEEEEEECCCC-----CcEEEEEecCCCCEEEEEecCC
Confidence 7776 46899999999999988876544 67889998 8988776665554
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.63 E-value=0.0011 Score=65.19 Aligned_cols=195 Identities=11% Similarity=0.040 Sum_probs=119.8
Q ss_pred CCCeEEeeCCCCeEEEeec---------CCCeEEEEEeeCceEEEEec-c--------CceeEEEEe-CCEEEEEEecC-
Q 015220 194 WPGFVEFDDVNGKVLTYSA---------QDSIYKVFDLKNYTMLYSIS-D--------KNVQEIKIS-PGIMLLIFTKA- 253 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~---------~ds~ykVWdL~~Ys~iysLs-~--------~~VqeIkIS-dG~~Lai~q~t- 253 (411)
.|| +-|+.-..++.+.+. .++++.|||+.+++.+.+|. . ++-..+.+| ||..|++.+..
T Consensus 67 ~P~-i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 67 LSL-AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp TCE-EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred CCc-eEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 474 788876667777662 47899999999999999985 2 456789999 89888888754
Q ss_pred CCceeeEEEEecCCcEEeEeee-----ccccCCcceee---------------------------------------eee
Q 015220 254 SGHVPLKILSIEDGTVLKSFNH-----LLHRNKKVDFI---------------------------------------EQF 289 (411)
Q Consensus 254 ~~~ipiKIl~I~tG~~L~t~~~-----LL~h~K~I~FL---------------------------------------E~~ 289 (411)
.+.+-+.++|+.| ++++.. +.+..+. -|+ -..
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~-~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~ 221 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASCFHIHPGAAA-THYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSCCCCEEEETT-EEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred CCeEEEEEEchhh---ceEEECCCceEEccCCCe-EEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcccccc
Confidence 4555555588776 333210 0000000 000 011
Q ss_pred cceeEEeecCceeeEEEcccceEEEeecccc---------CCCceE--EEEe--eceeEEEEe-c--------CeEEEEe
Q 015220 290 NEKLLVKQENENLQILDVRNFELTEVSRTEF---------MTPSAF--IFLY--ENQLFLTFR-N--------RTVAVWN 347 (411)
Q Consensus 290 ~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f---------~hpsAf--ifLy--~sqlFlSfs-d--------~tI~iWn 347 (411)
.+.++.... +.+.+.|+.+++...+..-.+ ..|... +.+. ...+|++.. + +.+.+||
T Consensus 222 ~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD 300 (368)
T 1mda_H 222 PGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300 (368)
T ss_dssp TTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEE
T ss_pred CCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEE
Confidence 122344444 667777776543222111000 012221 2222 236787754 2 3556999
Q ss_pred cC-CceeeeeccccccCCCCccceEEEcCCCC-EEEEEe-cCCCCCccccCCceEEEeeecceeee
Q 015220 348 FR-GELVTSFEDHLLWHPDCNTNNIYITSDQD-LIISYC-KADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 348 ~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd-~iiS~~-~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+. ++.++++.-... ...+++|+||+ ++++.. .+. +|-++|..|+|.+
T Consensus 301 ~~t~~vv~~i~vg~~------p~gi~~s~Dg~~l~va~~~~~~----------~VsVID~~t~kvv 350 (368)
T 1mda_H 301 ASVGQTSGPISNGHD------SDAIIAAQDGASDNYANSAGTE----------VLDIYDAASDQDQ 350 (368)
T ss_dssp SSSCCEEECCEEEEE------ECEEEECCSSSCEEEEEETTTT----------EEEEEESSSCEEE
T ss_pred CCCCeEEEEEECCCC------cceEEECCCCCEEEEEccCCCC----------eEEEEECCCCcEE
Confidence 99 999998865542 67899999998 455554 355 9999999999975
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.60 E-value=0.027 Score=49.78 Aligned_cols=177 Identities=8% Similarity=0.010 Sum_probs=113.7
Q ss_pred CCeEEEEEeeCce-------EEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCccee
Q 015220 214 DSIYKVFDLKNYT-------MLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (411)
Q Consensus 214 ds~ykVWdL~~Ys-------~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~F 285 (411)
.+.+..+|+.+.. .+......+...+.++ ++..|.+.+..+++ |..+++.+++. ..+. -.......-
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~--I~~~~~~g~~~-~~~~--~~~~~~p~~ 83 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPS--IGRASLHGGEP-TTII--RQDLGSPEG 83 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTE--EEEEESSSCCC-EEEE--CTTCCCEEE
T ss_pred CCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCE--EEEEecCCCCc-EEEE--ECCCCCccE
Confidence 4578888887753 3444445678899998 46666777766654 56678766554 2211 112245577
Q ss_pred eeeec--ceeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEEe---cCeEEEEecCCceeeeecc
Q 015220 286 IEQFN--EKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFR---NRTVAVWNFRGELVTSFED 358 (411)
Q Consensus 286 LE~~~--ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSfs---d~tI~iWn~~Gel~~s~e~ 358 (411)
|++.+ +++++.. +++.|..+|+.......+..+.+..|..+.+-. ...+|++-. +++|..++++|...+.+..
T Consensus 84 ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~ 163 (267)
T 1npe_A 84 IALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ 163 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC
T ss_pred EEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE
Confidence 88874 5677765 567899999876554444445556787665544 457888873 4689999999876655532
Q ss_pred ccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 359 HLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 359 H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
-. .-.-+.+++++|++.|.-.... +++|.++|+.+++
T Consensus 164 ~~----~~~P~gia~d~~~~~lyv~d~~---------~~~I~~~~~~g~~ 200 (267)
T 1npe_A 164 DN----LGLPNGLTFDAFSSQLCWVDAG---------THRAECLNPAQPG 200 (267)
T ss_dssp TT----CSCEEEEEEETTTTEEEEEETT---------TTEEEEEETTEEE
T ss_pred CC----CCCCcEEEEcCCCCEEEEEECC---------CCEEEEEecCCCc
Confidence 11 1256889999998766444332 2488888887654
No 230
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.55 E-value=0.014 Score=56.79 Aligned_cols=196 Identities=6% Similarity=0.007 Sum_probs=121.1
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCC-eEEEEEeeCceEEEEe------ccCceeEEEEeC--CEEEEEEecCCCceeeEEE
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDS-IYKVFDLKNYTMLYSI------SDKNVQEIKISP--GIMLLIFTKASGHVPLKIL 262 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds-~ykVWdL~~Ys~iysL------s~~~VqeIkISd--G~~Lai~q~t~~~ipiKIl 262 (411)
...|. +-||...+.+++.....+ .+.+|+..+......+ ....+..+.+++ |.+++ .... . -|..|
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~-~--~I~~~ 245 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSN-K--NFGRF 245 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTT-C--EEEEE
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECC-C--cEEEE
Confidence 34566 888876666666555443 7778887765444445 334778899994 66555 4432 2 57788
Q ss_pred EecCCcEEeEee-eccccCC--cceeeeeec--ceeEEee-cCceeeEEEcccceEEEeecc--------------ccCC
Q 015220 263 SIEDGTVLKSFN-HLLHRNK--KVDFIEQFN--EKLLVKQ-ENENLQILDVRNFELTEVSRT--------------EFMT 322 (411)
Q Consensus 263 ~I~tG~~L~t~~-~LL~h~K--~I~FLE~~~--ekllIKQ-e~~~LkI~dL~t~e~~~v~~T--------------~f~h 322 (411)
+..+++...-.. -..++.. |..-|...+ ..+++.. .++.|..||.... ...+.-. .|..
T Consensus 246 d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~ 324 (409)
T 3hrp_A 246 NVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQ 324 (409)
T ss_dssp ETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSS
T ss_pred ECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCC
Confidence 988887432100 0112111 222688887 4566654 6788999997644 3322211 2556
Q ss_pred CceEEEEeeceeEEEEe--cCeEEEEecC-Cceeeeecccc---ccC-------CCCccceEEEcCCCCEEEEEecCCCC
Q 015220 323 PSAFIFLYENQLFLTFR--NRTVAVWNFR-GELVTSFEDHL---LWH-------PDCNTNNIYITSDQDLIISYCKADSD 389 (411)
Q Consensus 323 psAfifLy~sqlFlSfs--d~tI~iWn~~-Gel~~s~e~H~---~~~-------~~c~~n~i~Is~Dqd~iiS~~~d~~~ 389 (411)
|..+.+-...++|++=+ ++.|+.|++. |. ++++.+|- ++. ..-.-..|++++||.+.|+-+...
T Consensus 325 P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~-- 401 (409)
T 3hrp_A 325 PNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGK-- 401 (409)
T ss_dssp EEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTC--
T ss_pred CeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCC--
Confidence 77666554557888864 6799999954 76 56666661 111 112467899999999999877665
Q ss_pred CccccCCceEEEeee
Q 015220 390 DPLAEGNGKLFVSLL 404 (411)
Q Consensus 390 ~~~~~~~gtI~i~~i 404 (411)
.|...++
T Consensus 402 --------~Ir~i~~ 408 (409)
T 3hrp_A 402 --------AIRKYAV 408 (409)
T ss_dssp --------EEEEEEE
T ss_pred --------eEEEEEe
Confidence 7776665
No 231
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.53 E-value=0.0038 Score=64.14 Aligned_cols=156 Identities=11% Similarity=0.111 Sum_probs=98.2
Q ss_pred eeEEEEe-CCEEEEEEecCCC--ceeeEEEEecCCcEEeEeeeccccC--CcceeeeeecceeEEeecC-----------
Q 015220 236 VQEIKIS-PGIMLLIFTKASG--HVPLKILSIEDGTVLKSFNHLLHRN--KKVDFIEQFNEKLLVKQEN----------- 299 (411)
Q Consensus 236 VqeIkIS-dG~~Lai~q~t~~--~ipiKIl~I~tG~~L~t~~~LL~h~--K~I~FLE~~~ekllIKQe~----------- 299 (411)
+..+.+| ||..||...-... ..-|.|++++||+.+... +... ..+.+. -++.++.-...
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~---~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP---LKDVKFSGISWL--GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE---EEEEESCCCEEE--TTTEEEEEESSCCC-------C
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc---cCCceeccEEEe--CCCEEEEEEecCcccccccccC
Confidence 5566788 8888887765554 388999999999987651 1211 223333 34456555443
Q ss_pred --ceeeEEEcccceE--EEeeccccC-CCceEEEEeec----eeEEEEec----CeEEEEecC-Cc-eeeeeccccccCC
Q 015220 300 --ENLQILDVRNFEL--TEVSRTEFM-TPSAFIFLYEN----QLFLTFRN----RTVAVWNFR-GE-LVTSFEDHLLWHP 364 (411)
Q Consensus 300 --~~LkI~dL~t~e~--~~v~~T~f~-hpsAfifLy~s----qlFlSfsd----~tI~iWn~~-Ge-l~~s~e~H~~~~~ 364 (411)
.+|.+|++.++.. ..|- +.-+ ||..++.++.+ .|+++-.+ +.|.+|++. |+ ..+.+..|..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~-~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~--- 281 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVF-GAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD--- 281 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEE-SCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS---
T ss_pred CCcEEEEEECCCCcccceEEE-ecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC---
Confidence 5599999998653 3321 2233 56667777766 45555432 488899987 43 5667777665
Q ss_pred CCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 365 DCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 365 ~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
.... .+++||+.|+--++.+ ..++.|-.+|+.+|++
T Consensus 282 --~~~~-~~~~~g~~l~~~t~~~------~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 282 --ADVS-LVDNKGSTLYLLTNRD------APNRRLVTVDAANPGP 317 (693)
T ss_dssp --SCEE-EEEEETTEEEEEECTT------CTTCEEEEEETTSCCG
T ss_pred --ceEE-EEeccCCEEEEEECCC------CCCCEEEEEeCCCCCc
Confidence 2222 3778877665444443 3468999999988754
No 232
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.47 E-value=0.011 Score=53.52 Aligned_cols=177 Identities=11% Similarity=0.072 Sum_probs=110.7
Q ss_pred CCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc-------CceeEEEEe-CCEEEEEEe--cC-----------
Q 015220 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-------KNVQEIKIS-PGIMLLIFT--KA----------- 253 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~-------~~VqeIkIS-dG~~Lai~q--~t----------- 253 (411)
|--+.+|. +|++++....++.+.+|+.. .+. ..+.+ ..+.++.++ +|.++++.. .+
T Consensus 88 ~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 88 TNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp EEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred cceeeECC-CCCEEEEECCCCEEEEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccccc
Confidence 44566664 78888877777788888875 332 22221 135578888 888665421 11
Q ss_pred -CCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce--eEEeecC------ceeeEEEcccceEEE---eeccccC
Q 015220 254 -SGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQEN------ENLQILDVRNFELTE---VSRTEFM 321 (411)
Q Consensus 254 -~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQe~------~~LkI~dL~t~e~~~---v~~T~f~ 321 (411)
....-|-.++..+|+...-. .-...+-+..++++ +++.... +.|.+||+..+.+.. ......+
T Consensus 165 ~~~~~~v~~~d~~~g~~~~~~-----~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~ 239 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPLQRMA-----DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG 239 (305)
T ss_dssp SSSCEEEEEECSSSCCCEEEE-----EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS
T ss_pred ccCCCeEEEEcCCCCcEEEEe-----cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC
Confidence 12345666777788865532 12334567888875 5666554 789999998654211 1112234
Q ss_pred CCceEEEEeeceeEEEEecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecC
Q 015220 322 TPSAFIFLYENQLFLTFRNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (411)
Q Consensus 322 hpsAfifLy~sqlFlSfsd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d 386 (411)
.|..+.+=...+++++- .+.|.+|+++|+++..+.-+. ...++..++|++.|...+.+
T Consensus 240 ~pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~~------~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 240 LPDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTPG------TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CCCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEECSS------CCCEEEECTTSCEEEEEETT
T ss_pred CCCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEECCC------ceeEEEEeCCCCEEEEEcCC
Confidence 56665443334666665 456999999999998876543 35678888999877766654
No 233
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.46 E-value=0.00053 Score=60.97 Aligned_cols=163 Identities=13% Similarity=0.097 Sum_probs=97.2
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceEEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
|.+|.+.+.. .++.+..|| .+.+.+.+.. +..+..+.+. +|.+.+. +.+ |..++. +|+.+..+..
T Consensus 28 d~~g~l~v~t-~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~---t~~---l~~~d~-~g~~~~~~~~--- 95 (330)
T 3hxj_A 28 AKNGTIYLGS-SNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFG---SDK---VYAINP-DGTEKWRFDT--- 95 (330)
T ss_dssp CTTSCEECSS-TTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCS---SCE---EEEECC-CGGGGGGSCC---
T ss_pred ccCCeEEEEc-CCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEe---cCc---EEEECC-CCcEEEEEEC---
Confidence 3466666543 345566777 7777665433 3355667775 7775442 223 777885 8888776431
Q ss_pred cCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEEecCeEEEEecCCceeeeec
Q 015220 279 RNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFRGELVTSFE 357 (411)
Q Consensus 279 h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSfsd~tI~iWn~~Gel~~s~e 357 (411)
.........+..+.+++...+..|..+|.. ++..--..+.- ....-.++. ...+++...++.|..||..|+++..+.
T Consensus 96 ~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~-~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 96 KKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKK-AIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp -----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSS-CCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEE
T ss_pred CCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCC-ceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe
Confidence 222233344558888888889999999998 55443111111 111112333 335666557799999999998877665
Q ss_pred cccccCCCCccceEEEcCCCCEEEEE
Q 015220 358 DHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 358 ~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
-+.. .+..+++.+||.+.++.
T Consensus 174 ~~~~-----~~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 174 TNDA-----ITSAASIGKDGTIYFGS 194 (330)
T ss_dssp CSSC-----CCSCCEECTTCCEEEES
T ss_pred cCCC-----ceeeeEEcCCCEEEEEe
Confidence 4322 56667777777766654
No 234
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.46 E-value=0.023 Score=58.98 Aligned_cols=267 Identities=11% Similarity=0.119 Sum_probs=150.5
Q ss_pred eccceehhhhccccceeeecccccEEEEEeCCCCc----------eEEEEEeecCCCeEEEEEeEecCCCceeeeEeeeh
Q 015220 103 AARDIVFALAQSGVCAAFCRETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRI 172 (411)
Q Consensus 103 ~a~dii~~L~~sG~c~af~~~t~~~ic~lN~s~~e----------vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~ 172 (411)
.+.+.|++.+..|.-.|+|..||+.+=........ +-+++-|. ++.|++.+ .| ..|.| ++
T Consensus 64 v~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~---~d--g~l~a--lD- 133 (668)
T 1kv9_A 64 FHDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGT---LD--GRLIA--LD- 133 (668)
T ss_dssp EETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEEC---TT--SEEEE--EE-
T ss_pred EECCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEc---CC--CEEEE--EE-
Confidence 35788888888999999999999998877764331 11332232 23343322 12 22333 21
Q ss_pred hhhhhCCCCCCCcceeecc---------cCCCCeEEeeCCCCeEEEeecC-----CCeEEEEEeeCceEEEEecc---C-
Q 015220 173 EYIRRGKPDAGFALFESES---------LKWPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISD---K- 234 (411)
Q Consensus 173 ~~i~~gk~~~~~~LF~~~~---------l~~PgfvEFDd~NGkiLt~~~~-----ds~ykVWdL~~Ys~iysLs~---~- 234 (411)
..-|+ .+.+... ...| .| .+|++++.... ++.+..||.+|.+++-+... +
T Consensus 134 --~~tG~-----~~W~~~~~~~~~~~~~~~~P-~v----~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p 201 (668)
T 1kv9_A 134 --AKTGK-----AIWSQQTTDPAKPYSITGAP-RV----VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDP 201 (668)
T ss_dssp --TTTCC-----EEEEEECSCTTSSCBCCSCC-EE----ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred --CCCCC-----EeeeeccCCCCCcceecCCC-EE----ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCC
Confidence 12222 2322211 1122 12 26777775543 68899999999998865531 1
Q ss_pred c-----------------------------eeEEEEe--CCEEEEEEecCCC----------------ceeeEEEEecCC
Q 015220 235 N-----------------------------VQEIKIS--PGIMLLIFTKASG----------------HVPLKILSIEDG 267 (411)
Q Consensus 235 ~-----------------------------VqeIkIS--dG~~Lai~q~t~~----------------~ipiKIl~I~tG 267 (411)
. ...+.+. .+++ .+...... ...|.-+|+.||
T Consensus 202 ~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~v-y~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG 280 (668)
T 1kv9_A 202 ALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLL-YVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG 280 (668)
T ss_dssp TSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEE-EEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC
T ss_pred CccccccccccccccCCccceeeeCCCCccccceEEcCCCCEE-EEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC
Confidence 0 0124454 3443 22221110 113889999999
Q ss_pred cEEeEeeeccccC-------Ccceeeeee-cc----eeEEeecCceeeEEEcccceEEE------------eeccccCC-
Q 015220 268 TVLKSFNHLLHRN-------KKVDFIEQF-NE----KLLVKQENENLQILDVRNFELTE------------VSRTEFMT- 322 (411)
Q Consensus 268 ~~L~t~~~LL~h~-------K~I~FLE~~-~e----kllIKQe~~~LkI~dL~t~e~~~------------v~~T~f~h- 322 (411)
++++.+.. -+|. .++-..++. .+ .+++.+.+..+-++|..||+.+- +.. ..+.
T Consensus 281 ~~~W~~~~-~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~-~~g~p 358 (668)
T 1kv9_A 281 KLAWHYQV-TPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL-ATGRP 358 (668)
T ss_dssp CEEEEEES-STTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT-TTCCE
T ss_pred ceeeEeec-CCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc-ccCCc
Confidence 99998763 2221 233333322 22 26777789999999999999872 100 0000
Q ss_pred --------------------------Cce------EEEEeecee-----------------EE-----------EE-ecC
Q 015220 323 --------------------------PSA------FIFLYENQL-----------------FL-----------TF-RNR 341 (411)
Q Consensus 323 --------------------------psA------fifLy~sql-----------------Fl-----------Sf-sd~ 341 (411)
|-| .+++..++. ++ .. .++
T Consensus 359 ~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g 438 (668)
T 1kv9_A 359 VEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSG 438 (668)
T ss_dssp EECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEE
T ss_pred cccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccc
Confidence 011 112211111 00 00 248
Q ss_pred eEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 342 TVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 342 tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+|..||+. |+.+=+...+.. . ....++..+++++.++.|. .+..+|..|||.+
T Consensus 439 ~l~A~D~~tG~~~W~~~~~~~-----~-~~~~~~t~gg~vf~g~~dg----------~l~a~d~~tG~~l 492 (668)
T 1kv9_A 439 ALLAWDPVKQKAAWKVPYPTH-----W-NGGTLSTAGNLVFQGTAAG----------QMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEETTTTEEEEEEEESSS-----C-CCCEEEETTTEEEEECTTS----------EEEEEETTTCCEE
T ss_pred eEEEEeCCCCcEEEEccCCCC-----C-cCceeEeCCCEEEEECCcc----------cchhhhhhcChhh
Confidence 89999998 998877765443 1 2234556788999987765 9999999999975
No 235
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=97.45 E-value=0.0015 Score=65.01 Aligned_cols=142 Identities=11% Similarity=0.035 Sum_probs=92.1
Q ss_pred ceeEEEEe--CCEEEEEEecCCCceeeEEEEecCCc---------EEeEeeeccccCCcceeeeeecceeEEeecCceee
Q 015220 235 NVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDGT---------VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQ 303 (411)
Q Consensus 235 ~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG~---------~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~Lk 303 (411)
.+.-+.+| .|. ++...+. -++||++++.+ .... .+....+ |..|.. .++.|...++..|+
T Consensus 39 ~~nlLais~~~gl-l~a~~~~----~l~v~~~~~l~~~~~~~~~~~~~~--~~~~lp~-V~~l~f-d~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSL-FVAASGS----KAVVGELQLLRDHITSDSTPLTFK--WEKEIPD-VIFVCF-HGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTE-EEEEETT----EEEEEEHHHHHHHHHSSSCCCCCS--EEEECTT-EEEEEE-ETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCE-EEEeCCC----EEEEEEhhHhhhhhccccccccce--EEeeCCC-eeEEEE-CCCEEEEEcCCcEE
Confidence 46666777 455 4444443 56678887665 1111 1223445 888888 66665555889999
Q ss_pred EEEcccceEEEeeccccCCCceEEEEeec--eeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEE
Q 015220 304 ILDVRNFELTEVSRTEFMTPSAFIFLYEN--QLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLI 380 (411)
Q Consensus 304 I~dL~t~e~~~v~~T~f~hpsAfifLy~s--qlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~i 380 (411)
+||+.+-..-. +...|...+..+.-. .+.+.-.||++.+||+. |.+.. |.. .+..+..||+| +
T Consensus 110 v~dv~sl~~~~---~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~-----~Vs~v~WSpkG--~ 175 (388)
T 1xip_A 110 SLDLEELSEFR---TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQ-----NVTSFDVTNSQ--L 175 (388)
T ss_dssp EEESSSTTCEE---EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEE-----SEEEEEECSSE--E
T ss_pred EEEchhhhccC---ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccC-----CceEEEEcCCc--e
Confidence 99998754322 222223333222211 33333499999999998 66542 444 78999999999 6
Q ss_pred EEEecCCCCCccccCCceEEEeeecceee
Q 015220 381 ISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 381 iS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+.|++|. +|.+|+..++++
T Consensus 176 ~vg~~dg----------~i~~~~~~~~~~ 194 (388)
T 1xip_A 176 AVLLKDR----------SFQSFAWRNGEM 194 (388)
T ss_dssp EEEETTS----------CEEEEEEETTEE
T ss_pred EEEEcCC----------cEEEEcCCCccc
Confidence 7898886 999999998875
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.44 E-value=0.0084 Score=57.45 Aligned_cols=170 Identities=12% Similarity=0.094 Sum_probs=113.7
Q ss_pred CceEEEEeccC---ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-cC
Q 015220 224 NYTMLYSISDK---NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-EN 299 (411)
Q Consensus 224 ~Ys~iysLs~~---~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ-e~ 299 (411)
+|+.+.++.++ ..|-+.++|| .|..+......+.|.++|++||+++.+.. |+..---.=|.+.++.+++.- .+
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~--l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYRNG-YFYESTGLNGRSSIRKVDIESGKTLQQIE--LGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEETT-EEEEEEEETTEEEEEEECTTTCCEEEEEE--CCTTCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEecCCCCcccceEEEECC-EEEEECCCCCCceEEEEECCCCcEEEEEe--cCCccceeEEEEeCCEEEEEEeeC
Confidence 46677777766 5688888887 57888888888999999999999999864 332111133667788886665 58
Q ss_pred ceeeEEEcccceEEE-eeccccCCCceEEEEeeceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCC
Q 015220 300 ENLQILDVRNFELTE-VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (411)
Q Consensus 300 ~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq 377 (411)
+.+-+||..+.+.+. ++-. +.+.++. -....+|+|=.+++|.++|+. ++.+++.+=-..-.|--..|-+-.. ||
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~--~eG~glt-~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD--GEGWGLT-HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS--SCCCCEE-ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CEEEEEECccCcEEEEEECC--CCceEEe-cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 899999999988876 3222 2333333 234577777667789999998 8887765432111111133434333 77
Q ss_pred CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 378 DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 378 d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+-+.-..++ +|-+-|..|||++
T Consensus 183 ~lyan~w~~~----------~I~vIDp~tG~V~ 205 (262)
T 3nol_A 183 EIFANVWQTN----------KIVRIDPETGKVT 205 (262)
T ss_dssp EEEEEETTSS----------EEEEECTTTCBEE
T ss_pred EEEEEEccCC----------eEEEEECCCCcEE
Confidence 7555443444 8888888888875
No 237
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.43 E-value=0.016 Score=57.75 Aligned_cols=187 Identities=12% Similarity=0.034 Sum_probs=123.7
Q ss_pred CCeEEEeecC----CCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCC-------CceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQ----DSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKAS-------GHVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~----ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~-------~~ipiKIl~I~tG~~L 270 (411)
-.++.+.... ++.+-|.|..+.+.+-+|. +..-. +.+| ||..|.+.+.-. ..-.+.+||..|++++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 4466666665 7899999999999999998 34445 9999 898888876422 2356999999999999
Q ss_pred eEeeeccccC------Ccceeeeeeccee--EEeec--CceeeEEEcccceEEEeeccccCCCc-eEEEEeeceeEEEE-
Q 015220 271 KSFNHLLHRN------KKVDFIEQFNEKL--LVKQE--NENLQILDVRNFELTEVSRTEFMTPS-AFIFLYENQLFLTF- 338 (411)
Q Consensus 271 ~t~~~LL~h~------K~I~FLE~~~ekl--lIKQe--~~~LkI~dL~t~e~~~v~~T~f~hps-AfifLy~sqlFlSf- 338 (411)
.++. ++.. ....-+++++|+- ++... ++.+.++|+.+++... |.- .|. +-++=.-.+.|++.
T Consensus 123 ~~I~--v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~---tI~-v~g~~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 123 ADIE--LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKR---MLD-VPDCYHIFPTAPDTFFMHC 196 (386)
T ss_dssp EEEE--ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEE-CCSEEEEEEEETTEEEEEE
T ss_pred EEEE--CCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEE---EEE-CCCcceeecCCCceeEEEC
Confidence 9954 3321 2455688887754 77764 6889999999999876 331 222 22222233567777
Q ss_pred ecCeEEEEecC--CceeeeeccccccCCC-CccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 339 RNRTVAVWNFR--GELVTSFEDHLLWHPD-CNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 339 sd~tI~iWn~~--Gel~~s~e~H~~~~~~-c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.|+++.+.++. |....+-..+..-... ...|-.|.++||.+++.-+ + |++.+.|..+++
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~----------g~V~v~d~~~~~ 258 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY-T----------GKIHQIDLSSGD 258 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT-T----------SEEEEEECTTSS
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC-C----------CEEEEEECCCCc
Confidence 89999999996 5654333322221111 1233456678998766332 2 477777776654
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.39 E-value=0.027 Score=50.95 Aligned_cols=198 Identities=7% Similarity=0.011 Sum_probs=114.1
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
..||.=.-||.....++.....++.+..|+...-...+......+..+.++ +|.+++ .+.... -|.+|+.. |+..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v-~~~~~~--~v~~~~~~-g~~~ 119 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVH-CEHGRR--AITRSDAD-GQAH 119 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEE-EETTTT--EEEEECTT-SCEE
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEE-EECCCC--EEEEECCC-CCEE
Confidence 345555667754445778888888888898843334455556678889998 787544 433322 35567764 7643
Q ss_pred eEeeeccc-cCCcceeeeeecceeEEee-------------------cCceeeEEEcccceEEEeeccccCCCceEEEEe
Q 015220 271 KSFNHLLH-RNKKVDFIEQFNEKLLVKQ-------------------ENENLQILDVRNFELTEVSRTEFMTPSAFIFLY 330 (411)
Q Consensus 271 ~t~~~LL~-h~K~I~FLE~~~ekllIKQ-------------------e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy 330 (411)
.-....-+ +...++-+...+++-+.-. ....|..||..+++...+. .+..|..+.|-.
T Consensus 120 ~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~sp 197 (305)
T 3dr2_A 120 LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSP 197 (305)
T ss_dssp EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECT
T ss_pred EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcC
Confidence 32111111 1123455777776654441 2467888998888887765 444555543322
Q ss_pred ec-eeEEEEec------CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEee
Q 015220 331 EN-QLFLTFRN------RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSL 403 (411)
Q Consensus 331 ~s-qlFlSfsd------~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~ 403 (411)
.. .+|++-+. +.|.+|++.++-+........ .+.-..+.+++++||.+.++. .. .|.+||
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~pdgi~~d~~G~lwv~~--~~----------gv~~~~ 264 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLPDGFCVDRGGWLWSSS--GT----------GVCVFD 264 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCCCSEEECTTSCEEECC--SS----------EEEEEC
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCCCeEEECCCCCEEEec--CC----------cEEEEC
Confidence 22 46666554 789999998432321111100 011234578999999976653 11 477777
Q ss_pred ecceee
Q 015220 404 LMFVTC 409 (411)
Q Consensus 404 i~tGk~ 409 (411)
. +|+.
T Consensus 265 ~-~g~~ 269 (305)
T 3dr2_A 265 S-DGQL 269 (305)
T ss_dssp T-TSCE
T ss_pred C-CCCE
Confidence 6 4543
No 239
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.33 E-value=0.025 Score=53.46 Aligned_cols=170 Identities=12% Similarity=0.068 Sum_probs=113.0
Q ss_pred CceEEEEeccC---ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-cC
Q 015220 224 NYTMLYSISDK---NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-EN 299 (411)
Q Consensus 224 ~Ys~iysLs~~---~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ-e~ 299 (411)
+|+.+.+.+++ ..|=+.+++|. |..+......+.|.++|++||+++.+.. |+...--+-+.+.++.+++-- .+
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~~~~-LyestG~~g~S~v~~vD~~tgkv~~~~~--l~~~~fgeGi~~~~~~ly~ltw~~ 84 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYLRGH-LYESTGETGRSSVRKVDLETGRILQRAE--VPPPYFGAGIVAWRDRLIQLTWRN 84 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEETTE-EEEEECCTTSCEEEEEETTTCCEEEEEE--CCTTCCEEEEEEETTEEEEEESSS
T ss_pred ceEEEEEcCCCCccccccEEEECCE-EEEECCCCCCceEEEEECCCCCEEEEEe--CCCCcceeEEEEeCCEEEEEEeeC
Confidence 56777777766 68888999875 7788888888999999999999999864 232222234667777775543 68
Q ss_pred ceeeEEEcccceEEE-eeccccCCCceEEEEeeceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCC
Q 015220 300 ENLQILDVRNFELTE-VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQ 377 (411)
Q Consensus 300 ~~LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dq 377 (411)
+.+.+||..+.+.+. ++.. +++.++. -....||+|=.+++|.++|+. .+.+++.+=...-.|--..|-+-- .||
T Consensus 85 ~~v~v~D~~tl~~~~ti~~~--~~Gwglt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G 160 (243)
T 3mbr_X 85 HEGFVYDLATLTPRARFRYP--GEGWALT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNG 160 (243)
T ss_dssp SEEEEEETTTTEEEEEEECS--SCCCEEE-ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETT
T ss_pred CEEEEEECCcCcEEEEEeCC--CCceEEe-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCC
Confidence 899999999988876 3332 3443332 334578888788899999998 787776653221011112232221 267
Q ss_pred CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 378 DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 378 d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.+-+--..++ .|-+-|..|||++
T Consensus 161 ~lyanvw~s~----------~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 161 ELLANVWLTS----------RIARIDPASGKVV 183 (243)
T ss_dssp EEEEEETTTT----------EEEEECTTTCBEE
T ss_pred EEEEEECCCC----------eEEEEECCCCCEE
Confidence 6443332344 7778888888764
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.31 E-value=0.0087 Score=53.09 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=107.6
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceEE--EEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccc
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTML--YSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~i--ysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
+.+|.+.+. ..++.+..||.+ .+.+ +.+....+..+.+. +|.+.+.. --|..++ .+|+.+..+. .
T Consensus 145 ~~~g~l~vg-t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t------~~l~~~d-~~g~~~~~~~---~ 212 (330)
T 3hxj_A 145 SEDGTIYVG-SNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS------DKVYAIN-PDGTEKWNFY---A 212 (330)
T ss_dssp CTTSCEEEE-CTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES------SSEEEEC-TTSCEEEEEC---C
T ss_pred cCCCEEEEE-cCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe------CEEEEEC-CCCcEEEEEc---c
Confidence 447776663 345777788888 6655 34445577777784 77755443 4577888 8999988744 2
Q ss_pred cCCcceeeeeecc-eeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEEecCeEEEEecCCceeeee
Q 015220 279 RNKKVDFIEQFNE-KLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTFRNRTVAVWNFRGELVTSF 356 (411)
Q Consensus 279 h~K~I~FLE~~~e-kllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSfsd~tI~iWn~~Gel~~s~ 356 (411)
....+..+...++ .+++...+..|..+|-...+.+..+.. -..+.. +.++ ...+++.-.++.|..+|..|+++.++
T Consensus 213 ~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g~~~~~~~~~-~~~~~~-~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~ 290 (330)
T 3hxj_A 213 GYWTVTRPAISEDGTIYVTSLDGHLYAINPDGTEKWRFKTG-KRIESS-PVIGNTDTIYFGSYDGHLYAINPDGTEKWNF 290 (330)
T ss_dssp SSCCCSCCEECTTSCEEEEETTTEEEEECTTSCEEEEEECS-SCCCSC-CEECTTSCEEEECTTCEEEEECTTSCEEEEE
T ss_pred CCcceeceEECCCCeEEEEcCCCeEEEECCCCCEeEEeeCC-CCcccc-ceEcCCCeEEEecCCCCEEEECCCCcEEEEE
Confidence 3355667777766 788888889999998544444443221 112222 2334 34677666777999999889988776
Q ss_pred ccccccCCCCccceEEEcCCCCEEEE
Q 015220 357 EDHLLWHPDCNTNNIYITSDQDLIIS 382 (411)
Q Consensus 357 e~H~~~~~~c~~n~i~Is~Dqd~iiS 382 (411)
.-. +-.+..+++.+||.+.|.
T Consensus 291 ~~~-----~~~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 291 ETG-----SWIIATPVIDENGTIYFG 311 (330)
T ss_dssp ECS-----SCCCSCCEECTTCCEEEE
T ss_pred EcC-----CccccceEEcCCCEEEEE
Confidence 533 336788899999998874
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.26 E-value=0.03 Score=53.10 Aligned_cols=171 Identities=11% Similarity=0.017 Sum_probs=113.6
Q ss_pred eCceEEEEeccC---ceeEEEEeC-CEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-
Q 015220 223 KNYTMLYSISDK---NVQEIKISP-GIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ- 297 (411)
Q Consensus 223 ~~Ys~iysLs~~---~VqeIkISd-G~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ- 297 (411)
.+|+.+.++... ..+-+.+++ | .|.+........-|.++|+.||+++.++. ++...-.+-+.+.++.+++..
T Consensus 7 ~~~~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--l~~~~fgeGi~~~g~~lyv~t~ 83 (266)
T 2iwa_A 7 YIVEVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHK--MDDSYFGEGLTLLNEKLYQVVW 83 (266)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEE--CCTTCCEEEEEEETTEEEEEET
T ss_pred cCceEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEe--cCCCcceEEEEEeCCEEEEEEe
Confidence 356777777755 358899995 7 46666655567789999999999999854 343333334667788886665
Q ss_pred cCceeeEEEcccceEEE-eeccccCCCceE-EEEeeceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEc
Q 015220 298 ENENLQILDVRNFELTE-VSRTEFMTPSAF-IFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYIT 374 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~-v~~T~f~hpsAf-ifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is 374 (411)
.++.+-++|..+++... ++-. .|+.. +.-....+|+|=.+++|.+.|+. .+.+++..=-..=.|--..|.+...
T Consensus 84 ~~~~v~viD~~t~~v~~~i~~g---~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 84 LKNIGFIYDRRTLSNIKNFTHQ---MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp TCSEEEEEETTTTEEEEEEECC---SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred cCCEEEEEECCCCcEEEEEECC---CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 57899999999988776 3221 23332 33345578887778899999998 6777765521100111135566555
Q ss_pred CCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 375 SDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 375 ~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
||.+-+.-..+ ++|-+-|..|||++
T Consensus 161 -dg~lyvn~~~~----------~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 161 -NGEVWANIWQT----------DCIARISAKDGTLL 185 (266)
T ss_dssp -TTEEEEEETTS----------SEEEEEETTTCCEE
T ss_pred -CCEEEEecCCC----------CeEEEEECCCCcEE
Confidence 77654443333 38999999999874
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.16 E-value=0.023 Score=54.74 Aligned_cols=165 Identities=12% Similarity=-0.006 Sum_probs=105.8
Q ss_pred eEEEEeccC---ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEee-cCce
Q 015220 226 TMLYSISDK---NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ-ENEN 301 (411)
Q Consensus 226 s~iysLs~~---~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ-e~~~ 301 (411)
+-+.++.++ ..|-+.++++. |.++...... |.++|++||+++.+. |+..---+=+.+.++.+++.- .++.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~-Ly~stG~~g~--v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~ 117 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGH-FFESTGHQGT--LRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTE-EEEEETTTTE--EEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCE
T ss_pred EEEEEEcCCCccccceEEEECCE-EEEEcCCCCE--EEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCE
Confidence 344455443 45777777764 6666666666 999999999999995 444221133677788886654 5889
Q ss_pred eeEEEcccceEEE-eeccccCCCceEEEEeeceeEEEEecCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCE
Q 015220 302 LQILDVRNFELTE-VSRTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDL 379 (411)
Q Consensus 302 LkI~dL~t~e~~~-v~~T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~ 379 (411)
+.+||..+.+.+. ++.. +.+.++. -....||+|=.+++|.++|+. ++.+++.+=-..-.+--..|-+--. ||.+
T Consensus 118 v~V~D~~Tl~~~~ti~~~--~eGwGLt-~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS--GEGWGLC-YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVI 193 (268)
T ss_dssp EEEEETTTTEEEEEEECS--SCCCCEE-EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEEECCcCcEEEEEeCC--CceeEEe-cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEE
Confidence 9999999998886 3321 2232333 344578888778899999998 8888765432210111123333322 7865
Q ss_pred EEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 380 IISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 380 iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
-+.-..++ +|-+-|..|||++
T Consensus 194 yanvw~s~----------~I~vIDp~TG~V~ 214 (268)
T 3nok_A 194 YANIWHSS----------DVLEIDPATGTVV 214 (268)
T ss_dssp EEEETTCS----------EEEEECTTTCBEE
T ss_pred EEEECCCC----------eEEEEeCCCCcEE
Confidence 54443444 8888888888875
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.14 E-value=0.051 Score=56.04 Aligned_cols=191 Identities=14% Similarity=0.133 Sum_probs=112.9
Q ss_pred eEEEeecCCCeEEEEEeeCc----eEEEEeccCc---------eeEEEEe-CCEEEEEEecC--CCceeeEEEEecCCcE
Q 015220 206 KVLTYSAQDSIYKVFDLKNY----TMLYSISDKN---------VQEIKIS-PGIMLLIFTKA--SGHVPLKILSIEDGTV 269 (411)
Q Consensus 206 kiLt~~~~ds~ykVWdL~~Y----s~iysLs~~~---------VqeIkIS-dG~~Lai~q~t--~~~ipiKIl~I~tG~~ 269 (411)
+..+.+..++.+-|+|.++. +..-+|..++ -..+..+ ||+|+..+... +..--+-++|.+|+++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v 176 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEP 176 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCE
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeE
Confidence 44455666788999999866 7778885333 3456777 78555443332 2334589999999999
Q ss_pred EeEeeeccc-cCCcceeeeeecceeEEeec--------------------CceeeEEEcccceEEE-eecc-ccCCCceE
Q 015220 270 LKSFNHLLH-RNKKVDFIEQFNEKLLVKQE--------------------NENLQILDVRNFELTE-VSRT-EFMTPSAF 326 (411)
Q Consensus 270 L~t~~~LL~-h~K~I~FLE~~~ekllIKQe--------------------~~~LkI~dL~t~e~~~-v~~T-~f~hpsAf 326 (411)
+++...--+ .....+|-=+-..+.++-++ ++.|.+||+.+++... +.-. .-..|..+
T Consensus 177 ~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 177 LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALEL 256 (462)
T ss_dssp EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEE
T ss_pred EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCcccee
Confidence 998542101 11233344444556777775 8999999999987665 1111 01123333
Q ss_pred EEEeec---eeEEEEe------cCeEEEEecC-Cceee----ee-----ccccccCC------CCccceEEEcCCCCEEE
Q 015220 327 IFLYEN---QLFLTFR------NRTVAVWNFR-GELVT----SF-----EDHLLWHP------DCNTNNIYITSDQDLII 381 (411)
Q Consensus 327 ifLy~s---qlFlSfs------d~tI~iWn~~-Gel~~----s~-----e~H~~~~~------~c~~n~i~Is~Dqd~ii 381 (411)
.|+... ..|++-. +++|.+|..+ |++-. ++ ++.+.--| .-....|.||+||++|.
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 342221 3455443 4577776666 43211 11 11110000 12457899999999998
Q ss_pred EEecCCCCCccccCCceEEEeeec
Q 015220 382 SYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 382 S~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
..+-.. |+|-++|+.
T Consensus 337 VSnrg~---------d~VavfdV~ 351 (462)
T 2ece_A 337 LSLWGI---------GEVRQYDIS 351 (462)
T ss_dssp EEETTT---------TEEEEEECS
T ss_pred EEeCCC---------CEEEEEEec
Confidence 877543 689888875
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.12 E-value=0.32 Score=50.02 Aligned_cols=55 Identities=9% Similarity=-0.031 Sum_probs=39.5
Q ss_pred cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 340 NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++|..||+. |+.+=+..-+.. ....... ..+.+++.|+.|. .+..+|..|||.+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~-----~~~g~~~-tagglvf~g~~dg----------~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLP-----LWAGVLA-TAGNLVFTGTGDG----------YFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSCCEE-ETTTEEEEECTTS----------EEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEEEEecCCCC-----CcccceE-eCCCEEEEECCCC----------cEEEEECCCCCEE
Confidence 5789999998 998866654332 1222233 3567888888765 9999999999976
No 245
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.03 E-value=0.1 Score=52.48 Aligned_cols=168 Identities=12% Similarity=0.055 Sum_probs=109.2
Q ss_pred eEEEeecCC----CeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCC-------CceeeEEEEecCCcEEeE
Q 015220 206 KVLTYSAQD----SIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKAS-------GHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 206 kiLt~~~~d----s~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~-------~~ipiKIl~I~tG~~L~t 272 (411)
++.+..... +++-|.|+.+.+.+-+|. +..= .|.+| ||..|.+.+.-. ..-.|.++|..|++++++
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~ 164 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD 164 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE
T ss_pred EEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE
Confidence 456665544 799999999999998887 3344 89999 898888887421 224799999999999998
Q ss_pred eeeccc-c-----CCcceeeeeecce--eEEeec--CceeeEEEcccceEEEeeccccCCCce-EEEEeeceeEEEE-ec
Q 015220 273 FNHLLH-R-----NKKVDFIEQFNEK--LLVKQE--NENLQILDVRNFELTEVSRTEFMTPSA-FIFLYENQLFLTF-RN 340 (411)
Q Consensus 273 ~~~LL~-h-----~K~I~FLE~~~ek--llIKQe--~~~LkI~dL~t~e~~~v~~T~f~hpsA-fifLy~sqlFlSf-sd 340 (411)
+. ++ . -....-+.+++|+ +++..+ ++.+.++|+.+++... +.- -|.. .++-.....|+++ .|
T Consensus 165 I~--v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~---~I~-v~g~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 165 IE--LPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDR---MLD-VPDCYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp EE--ETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEE---EEE-CCSEEEEEEEETTEEEEEETT
T ss_pred EE--CCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEE---EEE-cCCceeeccCCCcEEEEEcCC
Confidence 55 33 1 1335567888765 577764 5789999999998876 221 1222 2222234677888 78
Q ss_pred CeEEEEecC-Cceeeeeccccc-cCCCCccceEEEcCCCCEEE
Q 015220 341 RTVAVWNFR-GELVTSFEDHLL-WHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 341 ~tI~iWn~~-Gel~~s~e~H~~-~~~~c~~n~i~Is~Dqd~ii 381 (411)
+++.+.++. |....+.. +.. -........+.+++|++.+.
T Consensus 239 G~~~~V~~~~~~v~~~~~-~~~~v~~~p~~~~~~~~~dg~~~~ 280 (426)
T 3c75_H 239 GSLARVDFADGETKVTNT-EVFHTEDELLINHPAFSLRSGRLV 280 (426)
T ss_dssp SSEEEEECCTTCCEEEEC-CCCSCTTSCBCSCCEECTTTCEEE
T ss_pred CCEEEEECCCCcEEEEee-eeeccCCCceeeEeeecCCCCEEE
Confidence 888888875 55443211 110 01112233456688877554
No 246
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.93 E-value=0.2 Score=48.18 Aligned_cols=198 Identities=9% Similarity=0.054 Sum_probs=123.4
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+.+|-=+.||..++++.......+.+..|++.+......+.. .....+.+. .|. |.+.+....+ |.+.++.
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~-lY~~d~~~~~--I~~~~~d 189 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK-LYWTDSGTSR--IEVANLD 189 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTE-EEEEETTTTE--EEECBTT
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCe-EEEEcCCCCe--EEEEeCC
Confidence 45778999999999999999999999999999987653333332 244567777 344 4444444443 3445554
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEeec-C-ceeeEEEcccceEEEeeccccCCCceEEEE-eeceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQE-N-ENLQILDVRNFELTEVSRTEFMTPSAFIFL-YENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQe-~-~~LkI~dL~t~e~~~v~~T~f~hpsAfifL-y~sqlFlSf-s 339 (411)
|+....+. ...-....-|++. ...+++... + +.|..+|+....+..+-.+.+..|..+.+= ....||++= .
T Consensus 190 -g~~~~~l~--~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 190 -GAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp -SCSCEEEE--CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred -CCceEEee--cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 44333311 1222345667777 456777653 3 689999987766666555666677776554 345788887 6
Q ss_pred cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.|..++++|.-.+.+-...+. .-..|++ .++.+.++-.. +++|...|..+|+
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~~~~----~P~giav-~~~~ly~td~~----------~~~V~~~~~~~G~ 320 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQGLP----HPFAITV-FEDSLYWTDWH----------TKSINSANKFTGK 320 (386)
T ss_dssp TTEEEEECTTSCSCEEEECSSCS----SEEEEEE-ETTEEEEEETT----------TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCeeEEEEECCCC----CceEEEE-ECCEEEEeeCC----------CCeEEEEECCCCc
Confidence 78999999998755544322222 3356667 23344444322 3467666666664
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.81 E-value=0.56 Score=47.92 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=103.7
Q ss_pred ccceehhhhc-cccceeeec-ccccEEEEEeCCCCc----------eEEEEEeecCCCeEEEEEeEecCCCceeeeEeee
Q 015220 104 ARDIVFALAQ-SGVCAAFCR-ETNQRICFLNVTADE----------VIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (411)
Q Consensus 104 a~dii~~L~~-sG~c~af~~-~t~~~ic~lN~s~~e----------vIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 171 (411)
+.+.|++.+. +|.-.|+|. .||+.+=........ +-+++-+. ++.|++.+ .| ..|.| ++
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~---~d--g~l~a--lD 131 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQ---AN--GHLLA--LD 131 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEEC---TT--SEEEE--EE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEe---CC--CEEEE--EE
Confidence 5788888888 898999999 999998877665432 12333332 33444321 11 23333 21
Q ss_pred hhhhhhCCCCCCCcceeec--------ccCCCCeEEeeCCCCeEEEeecC-----CCeEEEEEeeCceEEEEeccC-ce-
Q 015220 172 IEYIRRGKPDAGFALFESE--------SLKWPGFVEFDDVNGKVLTYSAQ-----DSIYKVFDLKNYTMLYSISDK-NV- 236 (411)
Q Consensus 172 ~~~i~~gk~~~~~~LF~~~--------~l~~PgfvEFDd~NGkiLt~~~~-----ds~ykVWdL~~Ys~iysLs~~-~V- 236 (411)
.+-|+ .+.+.. .+..+-.| .+|++++.... ++.+..+|.+|.+.+-+..-. ..
T Consensus 132 ---~~tG~-----~~W~~~~~~~~~~~~~~~~P~v----~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~ 199 (571)
T 2ad6_A 132 ---AKTGK-----INWEVEVCDPKVGSTLTQAPFV----AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDD 199 (571)
T ss_dssp ---TTTCC-----EEEEEECCCGGGTCBCCSCCEE----ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHH
T ss_pred ---CCCCC-----EEEEecCCCCCccceeccCCEE----ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCcc
Confidence 12222 232211 11112222 15777775553 789999999999988655422 11
Q ss_pred --------------------------------------eEEEEe--CCEEEEEE-ecC--------CCc---eeeEEEEe
Q 015220 237 --------------------------------------QEIKIS--PGIMLLIF-TKA--------SGH---VPLKILSI 264 (411)
Q Consensus 237 --------------------------------------qeIkIS--dG~~Lai~-q~t--------~~~---ipiKIl~I 264 (411)
..+.+. .|.+.+-. ++. ... ..|.-+|.
T Consensus 200 ~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~ 279 (571)
T 2ad6_A 200 SVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDL 279 (571)
T ss_dssp HHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEET
T ss_pred ccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEec
Confidence 113333 34433322 111 111 24888999
Q ss_pred cCCcEEeEeeecccc--------CCcceeeeee-cc---e-eEEeecCceeeEEEcccceEEE
Q 015220 265 EDGTVLKSFNHLLHR--------NKKVDFIEQF-NE---K-LLVKQENENLQILDVRNFELTE 314 (411)
Q Consensus 265 ~tG~~L~t~~~LL~h--------~K~I~FLE~~-~e---k-llIKQe~~~LkI~dL~t~e~~~ 314 (411)
.||++++.+.. -+| +.|+ ..... .+ + ++..+.+..+-++|..+|+.+-
T Consensus 280 ~tG~~~W~~~~-~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 280 DTGMAKWGYQK-TPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp TTCCEEEEEES-STTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCcEEEEecC-CCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEe
Confidence 99999998663 222 2222 22222 22 2 3456677899999999998754
No 248
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.31 Score=47.82 Aligned_cols=161 Identities=9% Similarity=0.056 Sum_probs=102.6
Q ss_pred eecccCCCCeEEeeC-CCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCcee-eEEEE
Q 015220 188 ESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGHVP-LKILS 263 (411)
Q Consensus 188 ~~~~l~~PgfvEFDd-~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~ip-iKIl~ 263 (411)
+...+.+|.++-+|. .+|.+.+.... +.+.++|+.+.+....+. ...-..|.++ +|.+|.+.+...+.+. .-+|-
T Consensus 132 ~~~~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 132 DCGGFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp GCBCCSCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred HccCCCCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 344689999999997 57888887766 889999998865443333 3367789998 7876666665443332 22333
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeec--ceeEEee-cCceeeEEEcccceEEEeecc-ccCCCceEEEEeece-eEEEE
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQ-ENENLQILDVRNFELTEVSRT-EFMTPSAFIFLYENQ-LFLTF 338 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQ-e~~~LkI~dL~t~e~~~v~~T-~f~hpsAfifLy~sq-lFlSf 338 (411)
..+|...... .+..-+....+.+.+ +.+++.. +++.|..+|..+++...+... ....|..+.+-...+ +|++-
T Consensus 211 ~~~g~~~~~~--~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 211 TRESGFKVIT--ELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp EGGGTSCSEE--EEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred eCCCceeeee--eeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 3456544111 122334466788886 4556654 778999999998876432211 223455444333334 78887
Q ss_pred -ecCeEEEEecCCc
Q 015220 339 -RNRTVAVWNFRGE 351 (411)
Q Consensus 339 -sd~tI~iWn~~Ge 351 (411)
.++.|..++++|+
T Consensus 289 ~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 289 VNQHYILRSDYDWK 302 (430)
T ss_dssp TTTTEEEEEEEETT
T ss_pred CCCCEEEEEeCCcc
Confidence 7789999998864
No 249
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.69 E-value=0.08 Score=55.17 Aligned_cols=192 Identities=12% Similarity=0.086 Sum_probs=111.1
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccCc-------------eeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-------------VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-------------VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
+|++.+... ++.+.-+|.+|.+.+-+..-.. -..+.+.++.+++... .-.|..||..||+++
T Consensus 77 ~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~----dg~l~alD~~tG~~~ 151 (677)
T 1kb0_A 77 DGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW----DGRLIALDAATGKEV 151 (677)
T ss_dssp TTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT----TSEEEEEETTTCCEE
T ss_pred CCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC----CCEEEEEECCCCCEE
Confidence 555555443 4566667888888774443220 1234556776544321 134778999999999
Q ss_pred eEeeeccccC--Ccce-eeeeecceeEEeec------CceeeEEEcccceEEE-eeccc------------------cC-
Q 015220 271 KSFNHLLHRN--KKVD-FIEQFNEKLLVKQE------NENLQILDVRNFELTE-VSRTE------------------FM- 321 (411)
Q Consensus 271 ~t~~~LL~h~--K~I~-FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~-v~~T~------------------f~- 321 (411)
+++...-... ..+. .-.+..+.+++-.. +..|..||..||+..- ..... |.
T Consensus 152 W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 152 WHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred eeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 9976320100 1111 12245677777664 4789999999998763 11100 00
Q ss_pred ---------CCc--eEEEEe--eceeEEEEecC-------------------eEEEEecC-Cceeeeec--cccccCCCC
Q 015220 322 ---------TPS--AFIFLY--ENQLFLTFRNR-------------------TVAVWNFR-GELVTSFE--DHLLWHPDC 366 (411)
Q Consensus 322 ---------hps--AfifLy--~sqlFlSfsd~-------------------tI~iWn~~-Gel~~s~e--~H~~~~~~c 366 (411)
.+. .-..+. ...+|+...++ +|..+|.+ |+++-++. .|-.|.-+.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 000 011121 22455554443 59999999 99886544 466564333
Q ss_pred ccceEE--EcCCC---CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 367 NTNNIY--ITSDQ---DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 367 ~~n~i~--Is~Dq---d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
...-+. ++.|| ++++.++++ |.+.++|..|||++
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~----------G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKN----------GFFFVLDRTNGKFI 350 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTT----------SEEEEEETTTCCEE
T ss_pred CCCcEEEecccCCcEeeEEEEECCC----------CEEEEEECCCCCEe
Confidence 222222 23388 788888776 49999999999985
No 250
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.63 E-value=0.49 Score=44.83 Aligned_cols=198 Identities=10% Similarity=0.069 Sum_probs=122.5
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+.+|--+.||..++++.......+.+..+++.+...-..+.. .....+.+. +|. |.+.+...++ |.+.++.
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~-ly~~d~~~~~--I~~~~~d 146 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK-LYWTDSGTSR--IEVANLD 146 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE-EEEEETTTTE--EEEEETT
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCe-EEEEcCCCCe--EEEEcCC
Confidence 35678999999999999999999999999999987653333332 255667777 454 4444444443 4455654
Q ss_pred CCcEEeEeeeccccCCcceeeeeec--ceeEEeec-C-ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQE-N-ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe-~-~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-s 339 (411)
|+....+. ...-....-|++.+ ..+++... + +.|..+|+....+..+-.+.+..|.++.+=+ ...+|++= .
T Consensus 147 -G~~~~~l~--~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 147 -GAHRKVLL--WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp -SCSCEEEE--CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -CCceEEEE--eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECC
Confidence 44333311 12223456688874 56666653 3 6888899877666655455666777766543 55888887 6
Q ss_pred cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.++|..++++|.-.+.+-...+. .-..|++. ++.+.++-.. +++|...|-.+|+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~~~----~P~giav~-~~~ly~td~~----------~~~V~~~~~~~G~ 277 (349)
T 3v64_C 224 HHVIERANLDGSHRKAVISQGLP----HPFAITVF-EDSLYWTDWH----------TKSINSANKFTGK 277 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCS----SEEEEEEE-TTEEEEEETT----------TTEEEEEETTTCC
T ss_pred CCEEEEEeCCCCceEEEEeCCCC----CceEEEEE-CCEEEEecCC----------CCeEEEEEccCCC
Confidence 78999999998755544322222 33466662 3344444222 2356555555554
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.56 E-value=0.19 Score=52.47 Aligned_cols=192 Identities=14% Similarity=0.124 Sum_probs=111.2
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC---c----------eeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK---N----------VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~---~----------VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
+|++.+.. .++.+.-+|.+|.+.+-+.... + -..+.+.+|.+++-. ..-.|.-||..||+++
T Consensus 70 ~g~vyv~~-~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~----~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 70 DGVMYTTG-PFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV----LDGRLEAIDAKTGQRA 144 (689)
T ss_dssp TTEEEEEC-GGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC----TTSEEEEEETTTCCEE
T ss_pred CCEEEEEc-CCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc----cCCEEEEEECCCCCEe
Confidence 55555543 3556777788888887555422 1 012455677654432 1234788999999999
Q ss_pred eEeeeccccCC--cce-eeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCc-----------------
Q 015220 271 KSFNHLLHRNK--KVD-FIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPS----------------- 324 (411)
Q Consensus 271 ~t~~~LL~h~K--~I~-FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hps----------------- 324 (411)
+++....+... .+. .-.+.++.+++-.. +..|..||..||+..---.+.-+.|.
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 98764211110 111 11234667777553 46899999999996531111101111
Q ss_pred -----------e--EEEEe-ec-eeEEEEecC-------------------eEEEEecC-Cceeeeecc--ccccCCCCc
Q 015220 325 -----------A--FIFLY-EN-QLFLTFRNR-------------------TVAVWNFR-GELVTSFED--HLLWHPDCN 367 (411)
Q Consensus 325 -----------A--fifLy-~s-qlFlSfsd~-------------------tI~iWn~~-Gel~~s~e~--H~~~~~~c~ 367 (411)
. -..+. .. .+|+...|+ +|..||.+ |+++=++.. |..|.-++.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCC
Confidence 0 11221 22 444444554 49999999 998876654 666654443
Q ss_pred cceEEE--cCCCC---EEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 368 TNNIYI--TSDQD---LIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 368 ~n~i~I--s~Dqd---~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
--.+.. ..||+ .++.++++ |.+.++|..|||++
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~----------G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKN----------GFFYVIDRATGELL 342 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTT----------SEEEEEETTTCCEE
T ss_pred CCcEEEeeccCCcEEEEEEEECCC----------CeEEEEECCCCCEe
Confidence 222221 22565 77777666 59999999999986
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.38 E-value=0.22 Score=51.77 Aligned_cols=191 Identities=13% Similarity=0.058 Sum_probs=109.6
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccCc-------------eeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDKN-------------VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~-------------VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L 270 (411)
+|++.+.. .++.+.-+|.+|.+.+-+..... -..+.+.+|.+++.. ..-.|.-||.+||+++
T Consensus 66 ~g~vyv~~-~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 66 DGVIYTSM-SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT----LDGRLIALDAKTGKAI 140 (668)
T ss_dssp TTEEEEEE-GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC----TTSEEEEEETTTCCEE
T ss_pred CCEEEEEC-CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc----CCCEEEEEECCCCCEe
Confidence 44544433 24556666777777664443210 122445566654432 1234778999999999
Q ss_pred eEeeeccccCC--cce-eeeeecceeEEeecC------ceeeEEEcccceEEEeeccccCCCce----------------
Q 015220 271 KSFNHLLHRNK--KVD-FIEQFNEKLLVKQEN------ENLQILDVRNFELTEVSRTEFMTPSA---------------- 325 (411)
Q Consensus 271 ~t~~~LL~h~K--~I~-FLE~~~ekllIKQe~------~~LkI~dL~t~e~~~v~~T~f~hpsA---------------- 325 (411)
+++... .+.. .+. .-.+..+.+++-..+ ..|..||..||+..---.+.-..|..
T Consensus 141 W~~~~~-~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 141 WSQQTT-DPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEEECS-CTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeeccC-CCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 997631 1100 010 112346777776653 68999999999876411111011110
Q ss_pred --------------EEEEe-e-ceeEEEEecC-------------------eEEEEecC-Cceeeeec--cccccCCCCc
Q 015220 326 --------------FIFLY-E-NQLFLTFRNR-------------------TVAVWNFR-GELVTSFE--DHLLWHPDCN 367 (411)
Q Consensus 326 --------------fifLy-~-sqlFlSfsd~-------------------tI~iWn~~-Gel~~s~e--~H~~~~~~c~ 367 (411)
-..+. . ..+|+...++ +|..+|.+ |+++=++. .|..|.-++.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~ 299 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTAT 299 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCC
Confidence 01221 2 2445554554 49999998 99887654 4777765554
Q ss_pred cceEE--EcCCCC---EEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 368 TNNIY--ITSDQD---LIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 368 ~n~i~--Is~Dqd---~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
.-.+. +..||+ +++.++++ |.+.++|..|||++
T Consensus 300 ~~~~~~d~~~~G~~~~~v~~~~~~----------G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 300 QQITLAELNIDGKPRKVLMQAPKN----------GFFYVLDRTNGKLI 337 (668)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTT----------SEEEEEETTTCCEE
T ss_pred CCcEEEEeccCCcEEEEEEEECCC----------CEEEEEECCCCCEe
Confidence 33222 234776 67777665 59999999999986
No 253
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.32 E-value=0.81 Score=47.21 Aligned_cols=210 Identities=11% Similarity=0.070 Sum_probs=123.6
Q ss_pred eecccCCCCeEEeeCC-CCeEEEeecCCCeEEEEEeeCceEEEEecc-----CceeEEEE-------e-CCEEEEEEecC
Q 015220 188 ESESLKWPGFVEFDDV-NGKVLTYSAQDSIYKVFDLKNYTMLYSISD-----KNVQEIKI-------S-PGIMLLIFTKA 253 (411)
Q Consensus 188 ~~~~l~~PgfvEFDd~-NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~-----~~VqeIkI-------S-dG~~Lai~q~t 253 (411)
....+..|.++.||.. ++.+.+.....+.+++.|+++.+...-++. +....|.+ + +|.+|.+.+..
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 4566889999999984 677777777667888888888664433332 13566777 5 55433333222
Q ss_pred C--------------------------------------------Ccee--------eEEEEec-------CCcE-----
Q 015220 254 S--------------------------------------------GHVP--------LKILSIE-------DGTV----- 269 (411)
Q Consensus 254 ~--------------------------------------------~~ip--------iKIl~I~-------tG~~----- 269 (411)
. ..+| |..+++. ||+.
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 1 1111 2222222 2222
Q ss_pred ------EeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEc--ccceE-----EEee------------ccccC
Q 015220 270 ------LKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDV--RNFEL-----TEVS------------RTEFM 321 (411)
Q Consensus 270 ------L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL--~t~e~-----~~v~------------~T~f~ 321 (411)
+..+ .-++.......|.+.+++ ++|. .++|.|+.+|. .++.. +--. ...|.
T Consensus 294 ~~~~g~~~~l-~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~ 372 (496)
T 3kya_A 294 KNNPNTFKQL-FTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMN 372 (496)
T ss_dssp GGCTTTEEEE-EECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCS
T ss_pred ccccccccee-EecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccC
Confidence 0110 011222233457777776 5666 48899999654 44432 1111 23677
Q ss_pred CCceEEEEe--------eceeEEEE-ecCeEEEEecCCceeeeecccc-----------ccCC--------CCccceEEE
Q 015220 322 TPSAFIFLY--------ENQLFLTF-RNRTVAVWNFRGELVTSFEDHL-----------LWHP--------DCNTNNIYI 373 (411)
Q Consensus 322 hpsAfifLy--------~sqlFlSf-sd~tI~iWn~~Gel~~s~e~H~-----------~~~~--------~c~~n~i~I 373 (411)
+|..-+++. ...||++= .+..|+.++.+| .++|+-|.- ++.+ .-.-.-|++
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 899888885 34888887 778999999889 566776541 1111 123457999
Q ss_pred cCC-CCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 374 TSD-QDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 374 s~D-qd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+++ |.+.|+=+. |..|...++....|
T Consensus 452 d~~~g~lyVaD~~----------N~rIrki~~~~~~~ 478 (496)
T 3kya_A 452 DDVKEMFYVHDQV----------GHTIRTISMEQEEN 478 (496)
T ss_dssp ETTTTEEEEEETT----------TTEEEEEEECCCC-
T ss_pred ECCCCEEEEEeCC----------CCEEEEEECCCCcc
Confidence 997 888886433 34788777766544
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.29 E-value=1.3 Score=46.05 Aligned_cols=55 Identities=9% Similarity=-0.099 Sum_probs=39.0
Q ss_pred cCeEEEEecC-CceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 340 NRTVAVWNFR-GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++.+..||+. |+++=+..-... ...-.++..+++++.++.|. .+..+|..|||++
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~~~------~~~g~~~tagg~vf~gt~dg----------~l~A~D~~tG~~l 507 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMERFA------VWGGTMATAGDLVFYGTLDG----------YLKARDSDTGDLL 507 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEESSC------CCSBCEEETTTEEEEECTTS----------EEEEEETTTCCEE
T ss_pred cCeEEEEECCCCCEEeEecCCCC------ccCcceEecCCEEEEECCCC----------eEEEEECCCCCEE
Confidence 4789999998 998776642111 11223445678888887775 9999999999986
No 255
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.00 E-value=1.1 Score=48.42 Aligned_cols=161 Identities=7% Similarity=0.045 Sum_probs=109.5
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCc----eEEEEec--cCceeEEEEe-CCEEEEEEecCCCceeeEEEE
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY----TMLYSIS--DKNVQEIKIS-PGIMLLIFTKASGHVPLKILS 263 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Y----s~iysLs--~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~ 263 (411)
.+++|-=+.||..++++..+....+.+..+++... .....+. -.....+++. .|..|.+.+....+ |.+.+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~--I~v~~ 499 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT--VSVAD 499 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTE--EEEEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCe--EEEEe
Confidence 47788889999999999999999999999999863 1122222 2366778887 44445566666555 45666
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeec--ceeEEeecC--ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQEN--ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF 338 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~--~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf 338 (411)
+. |+...++. ...-....-|++.+ +.|++...+ +.|...++....+..+-.+.+..|.++.+=+ ...||++=
T Consensus 500 ld-G~~~~~l~--~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 500 TK-GVKRKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp TT-SSSEEEEE--ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CC-CCeEEEEE--eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 64 55544422 12234467788875 578887743 6899999987777666566677888866543 44788886
Q ss_pred -ecCeEEEEecCCceeeee
Q 015220 339 -RNRTVAVWNFRGELVTSF 356 (411)
Q Consensus 339 -sd~tI~iWn~~Gel~~s~ 356 (411)
..++|+..+++|.-.+.+
T Consensus 577 ~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 577 SKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp TTTTEEEEEETTSCSCEEE
T ss_pred CCCCcEEEEecCCCceEEE
Confidence 677999999998765554
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.93 E-value=1 Score=41.66 Aligned_cols=198 Identities=9% Similarity=0.064 Sum_probs=121.3
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeC----ceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEE
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILS 263 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~----Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~ 263 (411)
.+..|-=+.||..++++......++.+.++++.+ ...-..+.. .....+.+. .+--|.+.+...+++ .+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I--~~~~ 105 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV--SVAD 105 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE--EEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEE--EEEe
Confidence 4678889999999999999999999999999987 222222332 366788887 333344555555554 4667
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeec--ceeEEeecC--ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQEN--ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF 338 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~--~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf 338 (411)
+. |+...++.. ..-....-|++.+ ..+++...+ +.|...|+.-.....+-.+.+..|....+=+ ...+|++=
T Consensus 106 ~~-g~~~~~~~~--~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 106 TK-GVKRKTLFR--ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 182 (316)
T ss_dssp TT-SSSEEEEEE--CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred CC-CCceEEEEE--CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEE
Confidence 65 544444221 1223456788864 567777654 6888888865444444344566777655543 44788877
Q ss_pred -ecCeEEEEecCCceeeeeccc--cccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 339 -RNRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 339 -sd~tI~iWn~~Gel~~s~e~H--~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
..++|...+++|.-.+.+-.. .+-+ -..+++.. +.+.++-.. +++|...|..||+
T Consensus 183 ~~~~~I~~~d~dg~~~~~~~~~~~~~~~----P~giav~~-~~ly~~d~~----------~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 183 SKLHSISSIDVNGGNRKTILEDEKRLAH----PFSLAVFE-DKVFWTDII----------NEAIFSANRLTGS 240 (316)
T ss_dssp TTTTEEEEEETTSCSCEEEEECTTTTSS----EEEEEEET-TEEEEEETT----------TTEEEEEETTTCC
T ss_pred CCCCeEEEEecCCCceEEEeecCCccCC----cEEEEEEC-CEEEEEECC----------CCeEEEEeCCCCc
Confidence 667999999998765555321 2222 34666642 444444322 3477777776665
No 257
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.87 E-value=0.44 Score=46.67 Aligned_cols=102 Identities=8% Similarity=-0.112 Sum_probs=77.2
Q ss_pred CeEEEeecCCC----eEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecC-------CCceeeEEEEecCCcEEe
Q 015220 205 GKVLTYSAQDS----IYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKA-------SGHVPLKILSIEDGTVLK 271 (411)
Q Consensus 205 GkiLt~~~~ds----~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t-------~~~ipiKIl~I~tG~~L~ 271 (411)
.++.+....++ ++-|.|..+++.+-+|. +..= .+.+| ||..|.+.+.- ...-.|.+||+.|+++++
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 56777777666 78899999999998886 3333 79999 89888888743 224579999999999999
Q ss_pred EeeeccccC------Ccceeeeeecce--eEEeec--CceeeE--EEccc
Q 015220 272 SFNHLLHRN------KKVDFIEQFNEK--LLVKQE--NENLQI--LDVRN 309 (411)
Q Consensus 272 t~~~LL~h~------K~I~FLE~~~ek--llIKQe--~~~LkI--~dL~t 309 (411)
++. +|.. ...+-+.+++|+ +++..+ ++.+.+ +|+.+
T Consensus 111 ~I~--v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 111 DIE--LPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEE--ETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEE--CCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 965 3311 345668888875 577775 467899 99988
No 258
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.84 E-value=0.1 Score=54.86 Aligned_cols=199 Identities=8% Similarity=0.041 Sum_probs=120.4
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeC----ceEEEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEE
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----YTMLYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILS 263 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~----Ys~iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~ 263 (411)
.+..|--+.||..++++.......+.+.++++.+ ......+.. .....|.+. .+-.|.+.+...++ |.+++
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~--I~v~d 481 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGT--VSVAD 481 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSC--EEEEB
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCe--EEEEe
Confidence 3678989999999999999998899999999986 222222221 244556665 33334444544444 46677
Q ss_pred ecCCcEEeEeeeccccCCcceeeeeec--ceeEEeecC--ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE
Q 015220 264 IEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQEN--ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF 338 (411)
Q Consensus 264 I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~--~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf 338 (411)
+.. +...++. -..-....-|++.+ ..|++...+ +.|..+++.......+..+.+..|.++.+=+ ...||++=
T Consensus 482 ~dg-~~~~~l~--~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD 558 (699)
T 1n7d_A 482 TKG-VKRKTLF--REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 558 (699)
T ss_dssp SSS-CCEEEEC--CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEE
T ss_pred cCC-CceEEEE--eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEe
Confidence 654 4344321 11123456677764 566777643 6788888865544444345566787766543 35788877
Q ss_pred -ecCeEEEEecCCceeeeeccc--cccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 339 -RNRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 339 -sd~tI~iWn~~Gel~~s~e~H--~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
..++|.+.+++|.-.+.+-.. .+- .-..|++.++ .+.++-.. +++|...|..||+.
T Consensus 559 ~~~~~I~~~d~dG~~~~~~~~~~~~~~----~P~glavd~~-~lywtd~~----------~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 559 SKLHSISSIDVNGGNRKTILEDEKRLA----HPFSLAVFED-KVFWTDII----------NEAIFSANRLTGSD 617 (699)
T ss_dssp TTTTEEEEECSSSSCCEEECCCSSSCS----SCCCCEEETT-EEEEECST----------TTCEEEEETTTEEE
T ss_pred cCCCeEEEEccCCCceEEEEecCCcCC----CceEeEEECC-EEEEEeCC----------CCeEEEEEccCCCc
Confidence 677999999998655544321 121 2334555443 34444322 35888888888875
No 259
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.83 E-value=1.5 Score=42.53 Aligned_cols=196 Identities=9% Similarity=0.052 Sum_probs=122.2
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce----EEEEec--cCceeEEEEe--CCEEEEEEecCCCceeeEEE
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT----MLYSIS--DKNVQEIKIS--PGIMLLIFTKASGHVPLKIL 262 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys----~iysLs--~~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl 262 (411)
.+..|--+.||..++++.......+.+..+++.+.. ....+. -.....+.+. .|. |.+.+....++ .+.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~-lY~~d~~~~~I--~~~ 186 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSN-IYWTDSVLGTV--SVA 186 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTE-EEEEETTTTEE--EEE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCc-eEEEECCCCeE--EEE
Confidence 477899999999999999999999999999998621 222222 2366778887 444 45555555544 467
Q ss_pred EecCCcEEeEeeeccccCCcceeeeeec--ceeEEeec--CceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEE
Q 015220 263 SIEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLT 337 (411)
Q Consensus 263 ~I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe--~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlS 337 (411)
++..+. ..++. -..-....-|++.+ ..|++... .+.|...|+....+..+-.+.+..|.++.+=+ ...||++
T Consensus 187 ~~~g~~-~~~l~--~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 187 DTKGVK-RKTLF--RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp CTTTCS-EEEEE--ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred eCCCCc-eEEEE--eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEE
Confidence 765443 33321 11223356688864 56777763 37899999877666655556667888765543 4478888
Q ss_pred E-ecCeEEEEecCCceeeeeccc--cccCCCCccceEEEcCCCCEE-EEEecCCCCCccccCCceEEEeeeccee
Q 015220 338 F-RNRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSDQDLI-ISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 338 f-sd~tI~iWn~~Gel~~s~e~H--~~~~~~c~~n~i~Is~Dqd~i-iS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
= .+++|+..+++|.-.+.+-.. .+-+| ..+++ +++.| ++-. ++++|...|..||+
T Consensus 264 D~~~~~I~~~d~dG~~~~~~~~~~~~l~~P----~gl~v--~~~~lywtd~----------~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 264 DSKLHSISSIDVNGGNRKTILEDEKRLAHP----FSLAV--FEDKVFWTDI----------INEAIFSANRLTGS 322 (400)
T ss_dssp ETTTTEEEEEETTSCCCEEEEECSSTTSSE----EEEEE--ETTEEEEEES----------SSCSEEEEESSSCC
T ss_pred ECCCCEEEEEeCCCCccEEEEeCCCCCCCC----EEEEE--eCCEEEEecC----------CCCeEEEEEcCCCC
Confidence 6 678999999998765555321 22222 34555 44433 3322 23467777766664
No 260
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.80 E-value=1.6 Score=42.90 Aligned_cols=203 Identities=10% Similarity=0.069 Sum_probs=117.4
Q ss_pred ccCCCCeEEeeC--CCCeEEEeecCCCeEEEEEeeCceEEEEecc-CceeEEEEe-CCEEEEEEecCCCceeeEEEEe-c
Q 015220 191 SLKWPGFVEFDD--VNGKVLTYSAQDSIYKVFDLKNYTMLYSISD-KNVQEIKIS-PGIMLLIFTKASGHVPLKILSI-E 265 (411)
Q Consensus 191 ~l~~PgfvEFDd--~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~-~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I-~ 265 (411)
.|.+|..+-+|. -+|.+.+.... +.++++|+++.+....+.. .....+.++ +|. |.+.+..+...+-.++.+ .
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEEC
Confidence 789999999998 47898887776 8899999988775544442 368899999 777 455554332222222222 2
Q ss_pred CCcEEeEeeeccccCCcceeeeeec--ceeEEee-cCceeeEEEcccceE-EEeeccccCCCceE-EEEeec--eeEEEE
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQ-ENENLQILDVRNFEL-TEVSRTEFMTPSAF-IFLYEN--QLFLTF 338 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQ-e~~~LkI~dL~t~e~-~~v~~T~f~hpsAf-ifLy~s--qlFlSf 338 (411)
++...... .+..-....-+.+.+ ..+++.. .++.|..+|..+++. ..+. +.-..+..+ +++.-. .+|++=
T Consensus 215 ~~~~~~~~--~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 215 ASGFTERL--SLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGTTCCEE--EEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-ECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCeeccc--cccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-ccCCCCCcccEEEeCCCCEEEEEe
Confidence 22221110 122234445577776 4566666 567899999998877 3321 111122221 333322 488887
Q ss_pred -ecCeEEEEecCC---cee--eeeccc---cccC-------CCCccceEEE---------cCCCCEEEEEecCCCCCccc
Q 015220 339 -RNRTVAVWNFRG---ELV--TSFEDH---LLWH-------PDCNTNNIYI---------TSDQDLIISYCKADSDDPLA 393 (411)
Q Consensus 339 -sd~tI~iWn~~G---el~--~s~e~H---~~~~-------~~c~~n~i~I---------s~Dqd~iiS~~~d~~~~~~~ 393 (411)
.++.|..+++++ .+. .++.+. .+|. ..-.-+-+++ .++|++.|+=+.
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-------- 363 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-------- 363 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT--------
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC--------
Confidence 678999988773 221 244333 1111 1112345788 788888776332
Q ss_pred cCCceEEEeeecceee
Q 015220 394 EGNGKLFVSLLMFVTC 409 (411)
Q Consensus 394 ~~~gtI~i~~i~tGk~ 409 (411)
++.|..+|. +|++
T Consensus 364 --n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 364 --SHTVRVLTP-EGRV 376 (433)
T ss_dssp --TTEEEEECT-TSEE
T ss_pred --CCEEEEECC-CCCE
Confidence 346666663 5543
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.80 E-value=1.3 Score=41.84 Aligned_cols=163 Identities=14% Similarity=0.142 Sum_probs=111.5
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.-+-+|..+|++.......+.+.++++..-.....+.. ..-..|++. +|.|..+....++++ ..+++
T Consensus 113 ~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I--~r~~~- 189 (349)
T 3v64_C 113 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI--EASSM- 189 (349)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE--EEEET-
T ss_pred CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE--EEEeC-
Confidence 34678999999999999999999999999999987543333332 367888998 466555544332332 23333
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ecC
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RNR 341 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd~ 341 (411)
+|+....+.. ..-...+-|.+. .+.|++.. ..+.|..+|+..+.+..+......+|.++.+ +...+|.+- .++
T Consensus 190 dG~~~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~ 266 (349)
T 3v64_C 190 DGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTK 266 (349)
T ss_dssp TSCSCEESCC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCcEEEEE--CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCC
Confidence 5654444210 112234668886 56676665 6678999998776666555555779998877 778999998 788
Q ss_pred eEEEEe-cCCceeeeecc
Q 015220 342 TVAVWN-FRGELVTSFED 358 (411)
Q Consensus 342 tI~iWn-~~Gel~~s~e~ 358 (411)
.|...| +.|+.++.+..
T Consensus 267 ~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 267 SINSANKFTGKNQEIIRN 284 (349)
T ss_dssp EEEEEETTTCCSCEEEEC
T ss_pred eEEEEEccCCCccEEecc
Confidence 999998 66887666653
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.75 E-value=1.1 Score=43.06 Aligned_cols=164 Identities=14% Similarity=0.142 Sum_probs=111.4
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.-+-+|..+|++.......+.+.+.++........+.+ ..-..|++. +|.|.......++++ ..+++
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I--~r~~~- 232 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI--EASSM- 232 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEE--EEEET-
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEE--EEEeC-
Confidence 34678999999999999999999999999999976543333333 367888888 566555443332333 33333
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEee-cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ecC
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RNR 341 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd~ 341 (411)
+|+....+.. ..-.-.+-|.+. .+.|++.. ..+.|..+|+..+.+..+......+|.++.+ +...+|.+= .++
T Consensus 233 dG~~~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~ 309 (386)
T 3v65_B 233 DGSGRRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTK 309 (386)
T ss_dssp TSCSCEEEEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCcEEEEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCC
Confidence 4554444211 111234567876 56676664 6778999998766666555556779998877 778999998 778
Q ss_pred eEEEEe-cCCceeeeeccc
Q 015220 342 TVAVWN-FRGELVTSFEDH 359 (411)
Q Consensus 342 tI~iWn-~~Gel~~s~e~H 359 (411)
.|...| +.|+.++.+...
T Consensus 310 ~V~~~~~~~G~~~~~i~~~ 328 (386)
T 3v65_B 310 SINSANKFTGKNQEIIRNK 328 (386)
T ss_dssp EEEEEETTTCCSCEEEECS
T ss_pred eEEEEECCCCcceEEEccC
Confidence 999999 668877776543
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.70 E-value=0.47 Score=48.47 Aligned_cols=205 Identities=9% Similarity=-0.032 Sum_probs=115.4
Q ss_pred CCCeEEEeecC-CCeEEEEEeeCce--EEEEeccC--ceeEEEEeCCEEEEEEecCC---CceeeEEEEecCCcEEeEe-
Q 015220 203 VNGKVLTYSAQ-DSIYKVFDLKNYT--MLYSISDK--NVQEIKISPGIMLLIFTKAS---GHVPLKILSIEDGTVLKSF- 273 (411)
Q Consensus 203 ~NGkiLt~~~~-ds~ykVWdL~~Ys--~iysLs~~--~VqeIkISdG~~Lai~q~t~---~~ipiKIl~I~tG~~L~t~- 273 (411)
.||++++.++. ++...+||..+.+ .+-.+... .-..+.+.||.++++.-... ....+.+||..+++-..--
T Consensus 252 ~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~ 331 (656)
T 1k3i_A 252 GNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPN 331 (656)
T ss_dssp TTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETT
T ss_pred CCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCC
Confidence 68999999984 5688999988755 33333322 22334445898888875322 2345788999988743210
Q ss_pred ---eecc-c-------cCCcceeeeeecceeEEeecCceeeEEEcccceEEEeecccc---------CCCceEEE-Eeec
Q 015220 274 ---NHLL-H-------RNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEF---------MTPSAFIF-LYEN 332 (411)
Q Consensus 274 ---~~LL-~-------h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f---------~hpsAfif-Ly~s 332 (411)
.-+. . ....+..+--.+++.+.......+..||..+.+........- .+-.|+.+ ....
T Consensus 332 ~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~ 411 (656)
T 1k3i_A 332 AKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 411 (656)
T ss_dssp SCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTT
T ss_pred ccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCC
Confidence 0000 1 222333333333444444456789999999987665221111 01122222 2345
Q ss_pred eeEEEE-ecC-----------eEEEEecCCceeeeec-cccccCCCCccceEEEcCCCCEEEEEecCCCCC-ccccCCce
Q 015220 333 QLFLTF-RNR-----------TVAVWNFRGELVTSFE-DHLLWHPDCNTNNIYITSDQDLIISYCKADSDD-PLAEGNGK 398 (411)
Q Consensus 333 qlFlSf-sd~-----------tI~iWn~~Gel~~s~e-~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~-~~~~~~gt 398 (411)
++|+.+ .+. +|++||+.-.--+... +.+. .+-+ --...+.+||+++|.|..+.... .......+
T Consensus 412 ~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp-~~R~-~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 412 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLY-FART-FHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCS-SCCB-SCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCC-CCcc-cCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 888887 332 7889998844333332 2222 1111 12345678999999998764210 01123478
Q ss_pred EEEeeecceee
Q 015220 399 LFVSLLMFVTC 409 (411)
Q Consensus 399 I~i~~i~tGk~ 409 (411)
+.+||..|++.
T Consensus 490 v~~ydp~t~~W 500 (656)
T 1k3i_A 490 PEIYVPEQDTF 500 (656)
T ss_dssp CEEEEGGGTEE
T ss_pred eEEEcCCCCce
Confidence 99999998764
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.65 E-value=1.3 Score=43.01 Aligned_cols=164 Identities=14% Similarity=0.135 Sum_probs=112.3
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec--cCceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.=+-+|..+|++.......+.+.|.++..-.....+. -.....|++. +|.|..+....+++ |...++
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~--I~~~~~- 232 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK--IKKGGL- 232 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCC--EEEEET-
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCE--EEEEeC-
Confidence 3567899999999999999999999999999998755333333 2367889997 46655555444443 334444
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEee-cCceeeEEEcccceEEEeec--cccCCCceEEEEeeceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQ-ENENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQ-e~~~LkI~dL~t~e~~~v~~--T~f~hpsAfifLy~sqlFlSf-s 339 (411)
+|+....+.. ..-.-..-|.+. .+.|++.. +.+.|...|+..+.+..+.. ..+.||.++.. ....+|.+= .
T Consensus 233 dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~ 309 (400)
T 3p5b_L 233 NGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDII 309 (400)
T ss_dssp TSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESS
T ss_pred CCCccEEEEE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCC
Confidence 4554444211 111345567777 45676664 67899999997666655433 35678988754 777899988 7
Q ss_pred cCeEEEEe-cCCceeeeeccc
Q 015220 340 NRTVAVWN-FRGELVTSFEDH 359 (411)
Q Consensus 340 d~tI~iWn-~~Gel~~s~e~H 359 (411)
++.|..+| +.|+.++.+...
T Consensus 310 ~~~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 310 NEAIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp SCSEEEEESSSCCCCEEEECS
T ss_pred CCeEEEEEcCCCCceEEEecC
Confidence 77899999 559877766543
No 265
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.38 E-value=1.1 Score=45.67 Aligned_cols=209 Identities=11% Similarity=0.100 Sum_probs=115.0
Q ss_pred CCeEEeeCCCCeEEEeecCCC-----------eEEEEEeeCce--EEEEec---cCceeEEEEe-CCEEEEEEecCCCce
Q 015220 195 PGFVEFDDVNGKVLTYSAQDS-----------IYKVFDLKNYT--MLYSIS---DKNVQEIKIS-PGIMLLIFTKASGHV 257 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds-----------~ykVWdL~~Ys--~iysLs---~~~VqeIkIS-dG~~Lai~q~t~~~i 257 (411)
|-..-+-..+|++++.++.+. ...+||..+.+ .+-.+. +..-..+.+. ||.++++.-...+
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-- 265 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK-- 265 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT--
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC--
Confidence 334444444899999976432 57788888755 444442 2233345554 8888888765444
Q ss_pred eeEEEEecCCcEEeEeeeccccCCcceeeeee-cceeEEeecC-------ceeeEEEcccceEEEeeccc---cCCC-ce
Q 015220 258 PLKILSIEDGTVLKSFNHLLHRNKKVDFIEQF-NEKLLVKQEN-------ENLQILDVRNFELTEVSRTE---FMTP-SA 325 (411)
Q Consensus 258 piKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~-~ekllIKQe~-------~~LkI~dL~t~e~~~v~~T~---f~hp-sA 325 (411)
-+.+||..+++-..-. -++...--...... ++++++--+. ..+.+||..+++-..++... ...+ ..
T Consensus 266 ~v~~yd~~t~~W~~~~--~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~ 343 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGP--DMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ 343 (656)
T ss_dssp CEEEEEGGGTEEEECC--CCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT
T ss_pred ceEEecCcCCceeECC--CCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc
Confidence 5889999988654321 22222222345566 6777776552 57999999999877763211 0000 00
Q ss_pred EEEEeeceeEEE----------EecCeEEEEecCCc-eeeeecccccc-----CCCCccceEEE-cCCCCEEEEEecCCC
Q 015220 326 FIFLYENQLFLT----------FRNRTVAVWNFRGE-LVTSFEDHLLW-----HPDCNTNNIYI-TSDQDLIISYCKADS 388 (411)
Q Consensus 326 fifLy~sqlFlS----------fsd~tI~iWn~~Ge-l~~s~e~H~~~-----~~~c~~n~i~I-s~Dqd~iiS~~~d~~ 388 (411)
..+...+.+|+. +..++++.||+..+ -......+... .+.|- ..+.. .-++++++.|..+..
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~-~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG-NAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC-EEEEEETTTTEEEEECCBSSS
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC-ceEeccCCCCeEEEEeCCCCC
Confidence 111122233333 34567889999843 23333222110 11121 12222 458999999987643
Q ss_pred CCccccCC-ceEEEeeeccee
Q 015220 389 DDPLAEGN-GKLFVSLLMFVT 408 (411)
Q Consensus 389 ~~~~~~~~-gtI~i~~i~tGk 408 (411)
++.....+ .+|.+||..|++
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~ 443 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSP 443 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCC
T ss_pred CCCCcCCcceEEEcCCCCCCC
Confidence 33322332 478888887764
No 266
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.28 E-value=1.7 Score=44.62 Aligned_cols=191 Identities=10% Similarity=0.027 Sum_probs=110.6
Q ss_pred CCeEEEeecCCCeEEEEEeeCceEEEEeccC---ce--------eEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 204 NGKVLTYSAQDSIYKVFDLKNYTMLYSISDK---NV--------QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 204 NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~---~V--------qeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
+|++.+....++ +.-+|.+|.+.+-+.... .. ..+.+.++.+++... .-.|.-+|..||+++.+
T Consensus 68 ~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~----dg~l~AlD~~TG~~~W~ 142 (582)
T 1flg_A 68 DGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL----DASVVALNKNTGKVVWK 142 (582)
T ss_dssp TTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET----TTEEEEEESSSCCEEEE
T ss_pred CCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC----CCEEEEEECCCCCEEee
Confidence 566666555444 666777777777444322 10 223456776544321 12477799999999998
Q ss_pred eeeccccCC--cce-eeeeecc------eeEEeec------CceeeEEEcccceEEEeecccc-----------------
Q 015220 273 FNHLLHRNK--KVD-FIEQFNE------KLLVKQE------NENLQILDVRNFELTEVSRTEF----------------- 320 (411)
Q Consensus 273 ~~~LL~h~K--~I~-FLE~~~e------kllIKQe------~~~LkI~dL~t~e~~~v~~T~f----------------- 320 (411)
+..- .+.. .+. .-.+..+ .+++-.. +..|..+|..||+..=..++.-
T Consensus 143 ~~~~-~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~ 221 (582)
T 1flg_A 143 KKFA-DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDV 221 (582)
T ss_dssp EECS-CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCT
T ss_pred ecCC-CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccc
Confidence 6531 1111 111 1123445 5556543 5789999999998764222210
Q ss_pred C----------------------CCceE-EEEe-e-ceeEEEEe--------------------c----CeEEEEecC-C
Q 015220 321 M----------------------TPSAF-IFLY-E-NQLFLTFR--------------------N----RTVAVWNFR-G 350 (411)
Q Consensus 321 ~----------------------hpsAf-ifLy-~-sqlFlSfs--------------------d----~tI~iWn~~-G 350 (411)
+ ...+- ..+. . ..+|+.-. | ++|..+|.+ |
T Consensus 222 g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG 301 (582)
T 1flg_A 222 KAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSG 301 (582)
T ss_dssp TCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTC
T ss_pred ccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCC
Confidence 0 00000 1111 1 24455442 2 589999998 9
Q ss_pred ceeeee--ccccccCCCCccceEEEc---CCC---CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 351 ELVTSF--EDHLLWHPDCNTNNIYIT---SDQ---DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 351 el~~s~--e~H~~~~~~c~~n~i~Is---~Dq---d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++=++ ..|-.|.-+....-+... .|| ++++.++++- .+.++|..|||.+
T Consensus 302 ~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G----------~l~~lD~~tG~~l 359 (582)
T 1flg_A 302 EVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNG----------FFYVVDRSNGKLQ 359 (582)
T ss_dssp CEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTS----------EEEEEETTTCCEE
T ss_pred CEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCc----------eEEEEECCCCCEe
Confidence 988765 456666544433445554 578 4788887764 9999999999975
No 267
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.24 E-value=4.2 Score=43.92 Aligned_cols=164 Identities=14% Similarity=0.127 Sum_probs=112.9
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEec--cCceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSIS--DKNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs--~~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.=+-+|..++++.......+.+.|.++........+. -.....|.|. .|.|..+....+++ |.+.++
T Consensus 468 ~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~--I~~~~~- 544 (791)
T 3m0c_C 468 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK--IKKGGL- 544 (791)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE--EEEEET-
T ss_pred cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCe--EEEEec-
Confidence 3578899999999999999999999999999998754333333 2367889997 46665555444343 445555
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEee-cCceeeEEEcccceEEEeecc--ccCCCceEEEEeeceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQ-ENENLQILDVRNFELTEVSRT--EFMTPSAFIFLYENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQ-e~~~LkI~dL~t~e~~~v~~T--~f~hpsAfifLy~sqlFlSf-s 339 (411)
+|+....+.. ..-....-|.+. .+.|++.. +.+.|...|+.-+.+..+..+ .+.||.++- ++...||.|= .
T Consensus 545 dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~gla-v~~~~lYwtD~~ 621 (791)
T 3m0c_C 545 NGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLA-VFEDKVFWTDII 621 (791)
T ss_dssp TSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEE-EETTEEEEEETT
T ss_pred CCCceEEEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEE-EeCCEEEEEECC
Confidence 5665555321 111345567766 56777764 678899999977666665433 567888765 4777899988 6
Q ss_pred cCeEEEEec-CCceeeeeccc
Q 015220 340 NRTVAVWNF-RGELVTSFEDH 359 (411)
Q Consensus 340 d~tI~iWn~-~Gel~~s~e~H 359 (411)
+++|..-|. .|..++.+...
T Consensus 622 ~~~I~~~dk~tG~~~~~l~~~ 642 (791)
T 3m0c_C 622 NEAIFSANRLTGSDVNLLAEN 642 (791)
T ss_dssp TTEEEEEETTTCCCCEEEECS
T ss_pred CCEEEEEeCCCCcceEEeecC
Confidence 778888874 48766666443
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.22 E-value=2.1 Score=40.33 Aligned_cols=197 Identities=11% Similarity=0.079 Sum_probs=123.0
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEecC
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~t 266 (411)
+..|-=+.||..+|++.......+.+..+++.+.... ..+.. .....+.+. +|. |.+.+...+++ .++++.
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~-ly~~d~~~~~I--~~~~~d- 109 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK-LYWTDSETNRI--EVSNLD- 109 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTE-EEEEETTTTEE--EEEETT-
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCe-EEEEECCCCEE--EEEECC-
Confidence 5567789999999999999999999999999876321 11111 245567776 444 44455555544 466664
Q ss_pred CcEEeEeeeccccCCcceeeeeec--ceeEEee--cCceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-ec
Q 015220 267 GTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQ--ENENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-RN 340 (411)
Q Consensus 267 G~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQ--e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-sd 340 (411)
|+....+. -.......-|++.+ ..+++.. +++.|...|+.-.....+-.+.+..|..+.+=+ ...+|++= ..
T Consensus 110 G~~~~~l~--~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 110 GSLRKVLF--WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp SCSCEEEE--CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEE--eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCC
Confidence 44333321 12334456688874 5677776 367899999875555444445566787666554 45788887 67
Q ss_pred CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 341 RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 341 ~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+.|..++++|.-.+.+-...+.+| ..+++.+| .+.++ | -++++|...|..||+.
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~~~~P----~glav~~~-~lywt---d-------~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGSLPHP----FALTLFED-ILYWT---D-------WSTHSILACNKYTGEG 241 (318)
T ss_dssp TEEEEEETTSCSCEEEECSCCSCE----EEEEEETT-EEEEE---E-------TTTTEEEEEETTTCCS
T ss_pred CEEEEEcCCCCceEEEecCCCCCc----eEEEEeCC-EEEEE---e-------cCCCeEEEEECCCCCc
Confidence 899999999875555543223333 45666422 33333 2 1345787777777763
No 269
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.16 E-value=3 Score=42.52 Aligned_cols=79 Identities=6% Similarity=-0.005 Sum_probs=52.0
Q ss_pred eeeEEEEecCCcEEeEeeeccccCCccee--eeeecceeEEeecCceeeEEEcccceEEE---eeccccCCCceEEEEee
Q 015220 257 VPLKILSIEDGTVLKSFNHLLHRNKKVDF--IEQFNEKLLVKQENENLQILDVRNFELTE---VSRTEFMTPSAFIFLYE 331 (411)
Q Consensus 257 ipiKIl~I~tG~~L~t~~~LL~h~K~I~F--LE~~~ekllIKQe~~~LkI~dL~t~e~~~---v~~T~f~hpsAfifLy~ 331 (411)
-.|..||+.||++++++..- .++.- +...++.+++.+.+..|.+||..+|+..- +.......| +++...
T Consensus 444 g~l~a~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~~~~~~ 517 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWEK----FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP--MTYSFK 517 (571)
T ss_dssp EEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEET
T ss_pred CeEEEEECCCCCEEEEecCC----CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee--EEEEEC
Confidence 46889999999999986532 22222 23346778888899999999999999764 332233333 333344
Q ss_pred ceeEEEEecC
Q 015220 332 NQLFLTFRNR 341 (411)
Q Consensus 332 sqlFlSfsd~ 341 (411)
.++|+...++
T Consensus 518 G~~yv~~~~G 527 (571)
T 2ad6_A 518 GKQYIGSMYG 527 (571)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEECC
Confidence 4667766554
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.86 E-value=2.2 Score=38.68 Aligned_cols=195 Identities=9% Similarity=-0.039 Sum_probs=112.9
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCce--EEEEecc----CceeEEEEe--CCEEEEEEecCC---------
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYT--MLYSISD----KNVQEIKIS--PGIMLLIFTKAS--------- 254 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys--~iysLs~----~~VqeIkIS--dG~~Lai~q~t~--------- 254 (411)
...|--+-+|..+|++++.....+ +.++|..+.+ .+....+ .....+.+. +|.+.+.....+
T Consensus 79 ~~~p~gi~~~~~~g~l~v~d~~~~-i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 79 CGRTYDISYNLQNNQLYIVDCYYH-LSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp HCCEEEEEEETTTTEEEEEETTTE-EEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCCCceEEEcCCCCcEEEEECCCC-EEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 345777888877889888766544 6667776543 2221111 246778887 476554432211
Q ss_pred -----CceeeEEEEecCCcEEeEeeeccccCCcceeeeeecce--eEEe-ecCceeeEEEccc---ceEEEeeccccCCC
Q 015220 255 -----GHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEK--LLVK-QENENLQILDVRN---FELTEVSRTEFMTP 323 (411)
Q Consensus 255 -----~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ek--llIK-Qe~~~LkI~dL~t---~e~~~v~~T~f~hp 323 (411)
..--|-.++..+|+...-.. .-.-.+-|++.+++ +++. ..++.|..||+.. ++...+. ..-+ |
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P 231 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLK----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-P 231 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEE----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-E
T ss_pred hcccCCCceEEEEeCCCCEEEEecc----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-C
Confidence 12346667777777543211 11234457888763 6777 4568999999875 2322222 2223 6
Q ss_pred ceEEEEeeceeEEEEe-----------cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCcc
Q 015220 324 SAFIFLYENQLFLTFR-----------NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPL 392 (411)
Q Consensus 324 sAfifLy~sqlFlSfs-----------d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~ 392 (411)
..+..=..-.+|++-. .+.|..+|.+|++++.+....+... -....+.. .+|.+.|+.....
T Consensus 232 ~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~-~~g~L~v~~~~~~----- 304 (322)
T 2fp8_A 232 GNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAG-EHFEQIQE-HDGLLYIGTLFHG----- 304 (322)
T ss_dssp EEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTT-SCCCEEEE-ETTEEEEECSSCS-----
T ss_pred CCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCcc-ccceEEEE-eCCEEEEeecCCC-----
Confidence 6543322337888873 4678899999999998876543211 12333433 5677777655544
Q ss_pred ccCCceEEEeeec
Q 015220 393 AEGNGKLFVSLLM 405 (411)
Q Consensus 393 ~~~~gtI~i~~i~ 405 (411)
.|-.+++.
T Consensus 305 -----~i~~~~~~ 312 (322)
T 2fp8_A 305 -----SVGILVYD 312 (322)
T ss_dssp -----EEEEEEC-
T ss_pred -----ceEEEecc
Confidence 66666653
No 271
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.84 E-value=3.5 Score=42.93 Aligned_cols=197 Identities=9% Similarity=0.054 Sum_probs=122.1
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--------CceeEEEEe-CCEEEEEEecCCCceeeEEE
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--------KNVQEIKIS-PGIMLLIFTKASGHVPLKIL 262 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--------~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl 262 (411)
++.|--++||..++++..+....+.+..+++........+.. .....+++- .|--|.+.+...++ |-+.
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~--I~v~ 416 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNV--INVT 416 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTE--EEEE
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCE--EEEE
Confidence 455667999999999999999999999998876432222222 257778887 33334444444444 4555
Q ss_pred EecCCcEEeEeeeccccCCcceeeeeec--ceeEEeecC-c--eeeEEEcccceEEEeeccccCCCceEEEEee-ceeEE
Q 015220 263 SIEDGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQEN-E--NLQILDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFL 336 (411)
Q Consensus 263 ~I~tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~-~--~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~-sqlFl 336 (411)
++ +|+..+.+. ........-|++.+ ++|++.--+ + +|.-.++.-..+..+-.+....|.....=+. ..||.
T Consensus 417 ~~-~G~~~~~l~--~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LYw 493 (628)
T 4a0p_A 417 RL-DGRSVGVVL--KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFW 493 (628)
T ss_dssp ET-TSCEEEEEE--ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EC-CCCeEEEEE--eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEEE
Confidence 65 688766532 12334567788886 566666433 3 5777777655555544455667866555443 47888
Q ss_pred EE-ecCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 337 TF-RNRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 337 Sf-sd~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+= ..+.|+.-+++|.-.+.+-...+-|| ..|++.+ +.+.++=. .+.+|...|..||+
T Consensus 494 ~D~~~~~I~~~~~dG~~r~~~~~~~~~~P----~glav~~-~~ly~tD~----------~~~~i~~~~k~~G~ 551 (628)
T 4a0p_A 494 ADSDLRRIESSDLSGANRIVLEDSNILQP----VGLTVFE-NWLYWIDK----------QQQMIEKIDMTGRE 551 (628)
T ss_dssp EETTTTEEEEEETTSCSCEEEECSSCSCE----EEEEEET-TEEEEEET----------TTTEEEEEETTSSS
T ss_pred EeCCCCEEEEEeCCCCceEEEEcCCCCCc----EEEEEEC-CEEEEEEC----------CCCeEEEEECcCCC
Confidence 76 67899999999887666654333333 3555544 33333322 22366666666664
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.78 E-value=2.8 Score=43.86 Aligned_cols=194 Identities=12% Similarity=0.093 Sum_probs=103.4
Q ss_pred EEeeCCCCeEEEeecCC-----CeEEEEEeeCc----eEEEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEecC
Q 015220 198 VEFDDVNGKVLTYSAQD-----SIYKVFDLKNY----TMLYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~d-----s~ykVWdL~~Y----s~iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t 266 (411)
+.|. ++|+-|.|...+ ..+.++++.+- .++|.-+++ ....+.+| ||..|++....+...-|.++++.+
T Consensus 226 ~~Ws-pDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 226 IVWG-PDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CEEC-SSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred EEEe-cCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 4453 567777776654 23445566553 256665554 45678899 998888888777788899999998
Q ss_pred Cc-EE--eEeeeccccCCcc-eeee-eecceeEEeecC-----ceeeEEEccc-ceEE--EeeccccCCCceEEEEeece
Q 015220 267 GT-VL--KSFNHLLHRNKKV-DFIE-QFNEKLLVKQEN-----ENLQILDVRN-FELT--EVSRTEFMTPSAFIFLYENQ 333 (411)
Q Consensus 267 G~-~L--~t~~~LL~h~K~I-~FLE-~~~ekllIKQe~-----~~LkI~dL~t-~e~~--~v~~T~f~hpsAfifLy~sq 333 (411)
|+ .. .. +..+.... ...+ -.++.+++.... .+|-.+|+.+ ++.. .++......-..+ .+....
T Consensus 305 ~~~~~~~~~---l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~-~~~~~~ 380 (751)
T 2xe4_A 305 GNAHNTLEI---VRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESI-AVRSNY 380 (751)
T ss_dssp CTTCCCEEE---SSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEE-EECSSE
T ss_pred CCCCceeEE---eecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEE-EEECCE
Confidence 73 12 32 44443333 3344 336666666532 3566677765 2322 1221110001112 222446
Q ss_pred eEEEE-ecCeEEE--Eec-------C-CceeeeeccccccCCCCccceEEE------cCCC-CEEEEEecCCCCCccccC
Q 015220 334 LFLTF-RNRTVAV--WNF-------R-GELVTSFEDHLLWHPDCNTNNIYI------TSDQ-DLIISYCKADSDDPLAEG 395 (411)
Q Consensus 334 lFlSf-sd~tI~i--Wn~-------~-Gel~~s~e~H~~~~~~c~~n~i~I------s~Dq-d~iiS~~~d~~~~~~~~~ 395 (411)
++++. .++..++ +++ . |++++.+. + |. ....+.+ ++|+ .++++++... .
T Consensus 381 lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~---l--~~-~~~~~~~~~~~~~~~~~~~l~~~~ss~~-------~ 447 (751)
T 2xe4_A 381 LVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVV---M--EE-PIFTVHLVESQMLEYEEPTFRMEYSSLA-------T 447 (751)
T ss_dssp EEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECC---C--CC-SSCEEEECGGGCCCTTCSCEEEEEEETT-------E
T ss_pred EEEEEEeCCEEEEEEEecccccccccCCccceEEC---C--CC-ceeEEEeccCcccCCCCCEEEEEEeCCC-------C
Confidence 77776 6675554 454 3 33133331 0 00 1113345 3455 4777777653 1
Q ss_pred CceEEEeeecceee
Q 015220 396 NGKLFVSLLMFVTC 409 (411)
Q Consensus 396 ~gtI~i~~i~tGk~ 409 (411)
-++|-..|+.+|+.
T Consensus 448 P~~~~~~d~~~~~~ 461 (751)
T 2xe4_A 448 PNTWFDVSPQDHSR 461 (751)
T ss_dssp EEEEEEECTTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 14666667766653
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=94.77 E-value=3.7 Score=40.92 Aligned_cols=184 Identities=16% Similarity=0.233 Sum_probs=110.4
Q ss_pred eCCCCeEEEeecCCCeEEEEEeeCceEEEEeccCceeEEEEeCCE--------EEEEEecC--CCceeeEEEEe--cCCc
Q 015220 201 DDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISDKNVQEIKISPGI--------MLLIFTKA--SGHVPLKILSI--EDGT 268 (411)
Q Consensus 201 Dd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~~~VqeIkISdG~--------~Lai~q~t--~~~ipiKIl~I--~tG~ 268 (411)
|...+.+|..... +-+-|+|| +.+.|..|+.-.+.-|-+-+|. +++..++. +++ |.|++| .+++
T Consensus 37 dp~~s~ii~t~k~-~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~--l~vf~iDp~~~~ 112 (355)
T 3amr_A 37 TPQNSKLITTNKK-SGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT--IEIYAIDGKNGT 112 (355)
T ss_dssp CGGGCEEEEEETT-TEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCE--EEEEEECTTTCC
T ss_pred CCCccEEEEEcCC-CCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCCCCCCCe--EEEEEECCCCCc
Confidence 4555676666554 67999999 9999999997777777777666 56667776 555 778877 5665
Q ss_pred EEeEeeec---cccC-Ccceeeee--ec--c--eeEEeecCceeeEEEcc-------cceEEEeeccccCCCceEEEEe-
Q 015220 269 VLKSFNHL---LHRN-KKVDFIEQ--FN--E--KLLVKQENENLQILDVR-------NFELTEVSRTEFMTPSAFIFLY- 330 (411)
Q Consensus 269 ~L~t~~~L---L~h~-K~I~FLE~--~~--e--kllIKQe~~~LkI~dL~-------t~e~~~v~~T~f~hpsAfifLy- 330 (411)
+..+... ++.. ++++=|.. .+ . +.++-.++..+..|+|. ++++.+ +.-.-++.--|++
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR---~f~lgsq~EgcvvD 188 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR---AFKMNSQTEGMAAD 188 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE---EEECSSCEEEEEEE
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE---EecCCCCcceEEEc
Confidence 5553221 2222 66665555 33 2 47888888999999993 334433 3322223333333
Q ss_pred -ec-eeEEEEecCeEEEEecCCc--------eeeeec-cccccCCCCccceEEE--cCCCC-EEEEEe-cCCCCCccccC
Q 015220 331 -EN-QLFLTFRNRTVAVWNFRGE--------LVTSFE-DHLLWHPDCNTNNIYI--TSDQD-LIISYC-KADSDDPLAEG 395 (411)
Q Consensus 331 -~s-qlFlSfsd~tI~iWn~~Ge--------l~~s~e-~H~~~~~~c~~n~i~I--s~Dqd-~iiS~~-~d~~~~~~~~~ 395 (411)
.+ +||+.=.+.- ||-+..+ ++..+- +|+- .+ .--++| .+||+ .|+..| -+.
T Consensus 189 d~~g~Lyv~eEd~G--Iw~~da~p~~~~~~~~v~~~~~g~l~--aD--vEGLai~~~~~g~gyLivSsQG~~-------- 254 (355)
T 3amr_A 189 DEYGRLYIAEEDEA--IWKFSAEPDGGSNGTVIDRADGRHLT--RD--IEGLTIYYAADGKGYLMASSQGNS-------- 254 (355)
T ss_dssp TTTTEEEEEETTTE--EEEEECSTTSCSCCEEEEEBSSSSBC--SC--EEEEEEEECGGGCEEEEEEEGGGT--------
T ss_pred CCCCeEEEecccce--EEEEeCCcCCCCCceEEEEecCCccc--cC--cceEEEEecCCCCEEEEEEcCCCC--------
Confidence 23 7777777755 5666533 333331 1111 11 233444 88887 555555 333
Q ss_pred CceEEEeeec-cee
Q 015220 396 NGKLFVSLLM-FVT 408 (411)
Q Consensus 396 ~gtI~i~~i~-tGk 408 (411)
+..++|.. +.+
T Consensus 255 --s~~Vydr~~~~~ 266 (355)
T 3amr_A 255 --SYAIYDRQGKNK 266 (355)
T ss_dssp --EEEEEESSTTCC
T ss_pred --EEEEEECCCCCc
Confidence 78888875 443
No 274
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.74 E-value=1.7 Score=46.20 Aligned_cols=191 Identities=12% Similarity=0.112 Sum_probs=123.7
Q ss_pred CCeEEEEEeeCceEEEEec-cCceeEEEEe-CCEEEEEEecCCCc-----------------------------------
Q 015220 214 DSIYKVFDLKNYTMLYSIS-DKNVQEIKIS-PGIMLLIFTKASGH----------------------------------- 256 (411)
Q Consensus 214 ds~ykVWdL~~Ys~iysLs-~~~VqeIkIS-dG~~Lai~q~t~~~----------------------------------- 256 (411)
++++.|.|..+.+.+.+|. +.+-.-+.+| ||-.+.+.....+.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred CceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 6789999999999998887 2356667788 77777766654422
Q ss_pred eeeEEEEecC--CcE-EeEeeeccccCCcceeeeeeccee--EEee-cCceeeEEEcccce------------E-EEeec
Q 015220 257 VPLKILSIED--GTV-LKSFNHLLHRNKKVDFIEQFNEKL--LVKQ-ENENLQILDVRNFE------------L-TEVSR 317 (411)
Q Consensus 257 ipiKIl~I~t--G~~-L~t~~~LL~h~K~I~FLE~~~ekl--lIKQ-e~~~LkI~dL~t~e------------~-~~v~~ 317 (411)
--++|+|..+ |+. +.+ ++--+...-+..++|+- ++.. .+..+-++|+.+.+ . .++
T Consensus 254 ~~V~VID~~~~~~~~~~~~----Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-- 327 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRY----IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-- 327 (595)
T ss_dssp TTEEEEECSGGGCCSSEEE----EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--
T ss_pred CcEEEEeCcccCCceeEEE----EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--
Confidence 1378888888 665 444 23346677899998875 4444 67889999999864 1 222
Q ss_pred cccCCCceEEEEeeceeEEEE-ecCeEEEEecCC-----------ceeeeeccccccCCCCccceEEEcCCCCEEEEEec
Q 015220 318 TEFMTPSAFIFLYENQLFLTF-RNRTVAVWNFRG-----------ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCK 385 (411)
Q Consensus 318 T~f~hpsAfifLy~sqlFlSf-sd~tI~iWn~~G-----------el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~ 385 (411)
..---|.-+.|=.-..+|++. -|++|.+||.+. ..+.++.-|..=-.+|..--+.++|||+.|+|.++
T Consensus 328 ~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 328 ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 222245544444333677777 899999999874 25567776643100334444567999999999998
Q ss_pred CCCCCcc---ccCCceEEEeeecceeee
Q 015220 386 ADSDDPL---AEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 386 d~~~~~~---~~~~gtI~i~~i~tGk~~ 410 (411)
-..+.-. ++---+=-+.||.+||+.
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred CCccccccCCCCCCCcceEEEcCCCcEE
Confidence 7533210 111112267888777753
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.40 E-value=3.4 Score=38.78 Aligned_cols=186 Identities=11% Similarity=0.136 Sum_probs=112.6
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc---CceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCc
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD---KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~---~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
.-+.=+-||..+++..+-.-.+..+-..|++ .+.+..+.- .+...|++. +|.|++..... .++. ++++.+..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~-~~l~--~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERD-YAIY--VISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTT-TEEE--EEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCC-CcEE--EEEcCCCC
Confidence 3455677776666666655556666667776 777777642 377788887 88866655554 4433 67765443
Q ss_pred ---EEeEeee---ccccCCcceeeeeecc--eeEEeecCceeeEEEcc---cc-eEEEee-----ccc-cCCCceEEEEe
Q 015220 269 ---VLKSFNH---LLHRNKKVDFIEQFNE--KLLVKQENENLQILDVR---NF-ELTEVS-----RTE-FMTPSAFIFLY 330 (411)
Q Consensus 269 ---~L~t~~~---LL~h~K~I~FLE~~~e--kllIKQe~~~LkI~dL~---t~-e~~~v~-----~T~-f~hpsAfifLy 330 (411)
.+....+ ..+.++..+-|+..+. .+++.+|..+..||.+. ++ ....+. .+. -..+++..+=.
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2333322 2357888899999876 58999998888888875 11 111111 111 22567777666
Q ss_pred eceeEEEE--ecCeEEEEecCCceeee--ecc--ccccCCCCccceEEEcCCCCEEEE
Q 015220 331 ENQLFLTF--RNRTVAVWNFRGELVTS--FED--HLLWHPDCNTNNIYITSDQDLIIS 382 (411)
Q Consensus 331 ~sqlFlSf--sd~tI~iWn~~Gel~~s--~e~--H~~~~~~c~~n~i~Is~Dqd~iiS 382 (411)
.+.-++.. .++.+-+.|++|.++.. |.+ |-+...-.--.-|++.+||.+-|+
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv 240 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV 240 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE
Confidence 66444444 77899999999997663 332 111111123345666666666555
No 276
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.37 E-value=3.4 Score=42.88 Aligned_cols=199 Identities=11% Similarity=0.063 Sum_probs=120.7
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceE-EEEecc--CceeEEEEe-CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM-LYSISD--KNVQEIKIS-PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~-iysLs~--~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..++.|-=+.||..+|++..+.-..+.+..+++.+... ...+.. .....+++. .+--|.+.+...++ |.+.++.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~--I~v~~~d 114 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR--IEVSNLD 114 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE--EEEEETT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCE--EEEEECC
Confidence 34677888999999999999999999999999987642 223332 477888898 24445555555554 4555654
Q ss_pred CCcEEeEeeeccccCCcceeeeeec--ceeEEeec--CceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe--~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-s 339 (411)
|+....+. ...-.....|++.+ +++++.-- +..|.-.++.-..+..+-.+.+..|.++.+=+ ...||.+= .
T Consensus 115 -G~~~~~l~--~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~ 191 (619)
T 3s94_A 115 -GSLRKVLF--WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK 191 (619)
T ss_dssp -SCSCEEEE--CSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETT
T ss_pred -CCCEEEEE--eCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCC
Confidence 55444421 13344566788865 57788763 45677778765555554445666888766554 45888887 6
Q ss_pred cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.|...+++|.-.+.+-.-.+-||. .|.+.+| .+.+ +|- .+++|..-|..||+
T Consensus 192 ~~~I~~~~~dG~~~~~~~~~~~~~P~----gi~~~~~-~ly~---td~-------~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 192 LNFIHKSNLDGTNRQAVVKGSLPHPF----ALTLFED-ILYW---TDW-------STHSILACNKYTGE 245 (619)
T ss_dssp TCCEEEESSSCCEEC---------CC----CEEESSS-EEEE---ECT-------TTCSEEEEESSSCC
T ss_pred CCeEEEecCCCCccEEEEeCCCCCce----EEEEeCC-EEEE---ecC-------CCCEEEEEECCCCc
Confidence 78999999998755555332333443 5555544 3322 331 23467777777765
No 277
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.33 E-value=5.6 Score=41.12 Aligned_cols=171 Identities=12% Similarity=0.100 Sum_probs=107.6
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceEEE--------EeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTMLY--------SISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~iy--------sLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
|.+|++.+... + -+-+||.++.+... .+....|..+... +|.+.+-.. + -|-.|+..+++. .
T Consensus 460 d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~---Gl~~~~~~~~~~--~ 530 (795)
T 4a2l_A 460 DGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--E---GLSVFKQEGLDI--Q 530 (795)
T ss_dssp CSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--S---CEEEEEEETTEE--E
T ss_pred CCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--C---ceEEEeCCCCeE--E
Confidence 44677666554 3 35567776654332 2234567777776 676544332 2 367788888876 2
Q ss_pred eee----ccccCCcceeeeeec-ceeEEeecCceeeEEEcccceEEEeeccccCCCc-eEEEEeec---eeEEEEecCeE
Q 015220 273 FNH----LLHRNKKVDFIEQFN-EKLLVKQENENLQILDVRNFELTEVSRTEFMTPS-AFIFLYEN---QLFLTFRNRTV 343 (411)
Q Consensus 273 ~~~----LL~h~K~I~FLE~~~-ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hps-AfifLy~s---qlFlSfsd~tI 343 (411)
+.. .-.+...|..|.... +.+.|...+ -|..||..+++...... ..+.|. .+..+++. +++++- ++-|
T Consensus 531 ~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~d~~~~~~~~~~~-~~gl~~~~i~~i~~d~~g~lWi~t-~~Gl 607 (795)
T 4a2l_A 531 KASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GFYCFNEKDKQIKRYNT-TNGLPNNVVYGILEDSFGRLWLST-NRGI 607 (795)
T ss_dssp ECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECG-GGTCSCSCEEEEEECTTSCEEEEE-TTEE
T ss_pred EecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-CceeECCCCCcEEEeCC-CCCCchhheEEEEECCCCCEEEEc-CCce
Confidence 221 011334566676654 456777766 89999998887766532 233444 45555543 566665 6778
Q ss_pred EEEecCCceeeeeccccccC-CCCccceEEEcCCCCEEEEEe
Q 015220 344 AVWNFRGELVTSFEDHLLWH-PDCNTNNIYITSDQDLIISYC 384 (411)
Q Consensus 344 ~iWn~~Gel~~s~e~H~~~~-~~c~~n~i~Is~Dqd~iiS~~ 384 (411)
..|++....++.+..+.+.. ...+.++++.++||.+.+++.
T Consensus 608 ~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~ 649 (795)
T 4a2l_A 608 SCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI 649 (795)
T ss_dssp EEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET
T ss_pred EEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC
Confidence 88999977788887666543 334457899999999999874
No 278
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.07 E-value=3.3 Score=37.49 Aligned_cols=183 Identities=14% Similarity=0.128 Sum_probs=103.9
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEE-EEec--------------------cCceeEEEEe--CCEE
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTML-YSIS--------------------DKNVQEIKIS--PGIM 246 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-ysLs--------------------~~~VqeIkIS--dG~~ 246 (411)
..+..|.=+-+|. +|.++.....++.+..||..+.+.. +... ......+.+. +|.+
T Consensus 16 g~~~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEE
T ss_pred CccCCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcE
Confidence 3456787777775 4664444555666666777654321 2211 1257778887 4664
Q ss_pred EEEEecCCCceeeEEEEecCCcEEeEeeecc-c-cCCcceeeeeec-c-eeEEeec------------------CceeeE
Q 015220 247 LLIFTKASGHVPLKILSIEDGTVLKSFNHLL-H-RNKKVDFIEQFN-E-KLLVKQE------------------NENLQI 304 (411)
Q Consensus 247 Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL-~-h~K~I~FLE~~~-e-kllIKQe------------------~~~LkI 304 (411)
.+.+..+. +..++..+|+.. .+.... + .-.-.+-|.+.+ + .+++... ...|..
T Consensus 95 -~v~d~~~~---i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 95 -YIVDCYYH---LSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp -EEEETTTE---EEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred -EEEECCCC---EEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 44443332 667787777532 211111 1 111234477776 4 4566542 256888
Q ss_pred EEcccceEEEeeccccCCCceEEEEee-ceeEEEE-ecCeEEEEecCCcee---eeeccccccCCCCccceEEEcCCCCE
Q 015220 305 LDVRNFELTEVSRTEFMTPSAFIFLYE-NQLFLTF-RNRTVAVWNFRGELV---TSFEDHLLWHPDCNTNNIYITSDQDL 379 (411)
Q Consensus 305 ~dL~t~e~~~v~~T~f~hpsAfifLy~-sqlFlSf-sd~tI~iWn~~Gel~---~s~e~H~~~~~~c~~n~i~Is~Dqd~ 379 (411)
||..+++...+. ..+..|..+.+-.. +.+|++= .++.|.++++.|+.+ +.+.+ . +. -+.+++.+||.+
T Consensus 170 ~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~---~g--P~gi~~d~~G~l 242 (322)
T 2fp8_A 170 YDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-I---PN--PGNIKRNADGHF 242 (322)
T ss_dssp EETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-C---SS--EEEEEECTTSCE
T ss_pred EeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-C---CC--CCCeEECCCCCE
Confidence 898888765543 33456665333222 2477775 568999999986422 22221 1 12 577999999998
Q ss_pred EEEEec
Q 015220 380 IISYCK 385 (411)
Q Consensus 380 iiS~~~ 385 (411)
.|+-..
T Consensus 243 ~va~~~ 248 (322)
T 2fp8_A 243 WVSSSE 248 (322)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 888655
No 279
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.93 E-value=4.6 Score=42.03 Aligned_cols=142 Identities=14% Similarity=0.099 Sum_probs=84.8
Q ss_pred eeEEEEecCCcEEeEeeeccccCC--cce-eeeeecceeEEeec------CceeeEEEcccceEEE-eecc--c------
Q 015220 258 PLKILSIEDGTVLKSFNHLLHRNK--KVD-FIEQFNEKLLVKQE------NENLQILDVRNFELTE-VSRT--E------ 319 (411)
Q Consensus 258 piKIl~I~tG~~L~t~~~LL~h~K--~I~-FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~-v~~T--~------ 319 (411)
.|.-+|.+||+++.++..- .+.. .+. .-.+..+.+++-.. +..|..+|..||+..= .... .
T Consensus 132 ~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENS-DIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp EEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBC
T ss_pred EEEEEECCCCCEEEeecCC-CCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccc
Confidence 4667899999999986521 1110 111 11345666676653 5799999999998653 1111 0
Q ss_pred ----cCCC----------------------ce--EEEEe--eceeEEEEec----------------CeEEEEecC-Cce
Q 015220 320 ----FMTP----------------------SA--FIFLY--ENQLFLTFRN----------------RTVAVWNFR-GEL 352 (411)
Q Consensus 320 ----f~hp----------------------sA--fifLy--~sqlFlSfsd----------------~tI~iWn~~-Gel 352 (411)
+.+| .. -..+. ...+|+...+ ++|-.+|.+ |++
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~ 290 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEA 290 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCE
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCce
Confidence 0000 00 11111 2245555444 388899998 998
Q ss_pred eee--eccccccCCCCccceEEEc---CCC---CEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 353 VTS--FEDHLLWHPDCNTNNIYIT---SDQ---DLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 353 ~~s--~e~H~~~~~~c~~n~i~Is---~Dq---d~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+=. ...|..|.-+..-.-+.+. .|| ++++.++++ |.+-+.|..|||++
T Consensus 291 ~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~----------G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 291 KFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRN----------GIVYTLDRTDGALV 346 (599)
T ss_dssp EEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTT----------SEEEEEETTTCCEE
T ss_pred eeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCC----------cEEEEEECCCCCEe
Confidence 754 4556677555543334443 678 577777665 59999999999875
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.77 E-value=2 Score=42.25 Aligned_cols=242 Identities=12% Similarity=0.047 Sum_probs=127.7
Q ss_pred ccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCcceeecccCC
Q 015220 115 GVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFALFESESLKW 194 (411)
Q Consensus 115 G~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~LF~~~~l~~ 194 (411)
+.-..+|..+|+..-++- ...-...|-+....+ |+++....... -+. .+. ....+....+. .+ ..+.+
T Consensus 162 ~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~---~~g-v~~--~~~~~~~~~~~-~~--~~~~~ 229 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDT---NTG-IYL--FTRASGFTERL-SL--CNARG 229 (433)
T ss_dssp SCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTT---SEE-EEE--ECGGGTTCCEE-EE--EECSS
T ss_pred CCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcc---cce-EEE--EECCCCeeccc-cc--cccCC
Confidence 566667766666554432 444567777777777 44432111000 000 110 11122221111 22 25889
Q ss_pred CCeEEeeCCCCeEEEeecCCCeEEEEEeeCceE---EEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcE
Q 015220 195 PGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM---LYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTV 269 (411)
Q Consensus 195 PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~---iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~ 269 (411)
|--+-+|..+|.+.+....++.+.++|..+.+. +...... .-.-+.++ +|-.|.+.+..++++..-=++-.+|+.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 999999999999999988889888999886654 2222221 11236666 555555555555443322222224432
Q ss_pred EeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEE---------eeceeEEEE-e
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFL---------YENQLFLTF-R 339 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifL---------y~sqlFlSf-s 339 (411)
..... +.+. ++. .+. ..+ ......|.+|..+.++ ....+|++= .
T Consensus 310 ~~~~~-~ag~---------~g~------~g~-------~dg---~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 310 AVPYI-VCGQ---------HSS------PGW-------VDG---MGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp CCCEE-EEEC---------TTC------CCC-------BCE---EGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CcEEE-EEec---------CCC------Ccc-------CCC---cccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 11000 0010 000 000 001 0123567788887774 344788887 6
Q ss_pred cCeEEEEecCCceeeeeccc-----cccC--------CCCccceEEEc-CCCCEEEEEecCCCCCccccCCceEEEeeec
Q 015220 340 NRTVAVWNFRGELVTSFEDH-----LLWH--------PDCNTNNIYIT-SDQDLIISYCKADSDDPLAEGNGKLFVSLLM 405 (411)
Q Consensus 340 d~tI~iWn~~Gel~~s~e~H-----~~~~--------~~c~~n~i~Is-~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~ 405 (411)
++.|+.++..|.+. ++-+. .++. .--.-..|+++ ++|.+.|+=... ..|...+++
T Consensus 364 n~~I~~~~~~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n----------~rIr~i~~e 432 (433)
T 4hw6_A 364 SHTVRVLTPEGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDN----------HRVRKIAPE 432 (433)
T ss_dssp TTEEEEECTTSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG----------TEEEEEEEC
T ss_pred CCEEEEECCCCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCC----------CEEEEEecC
Confidence 78999999999654 44332 1111 11234579999 888888864433 377766653
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.55 E-value=0.43 Score=50.13 Aligned_cols=164 Identities=15% Similarity=0.123 Sum_probs=105.7
Q ss_pred ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEecC
Q 015220 191 SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIED 266 (411)
Q Consensus 191 ~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~t 266 (411)
.+..|.-+-+|..+|++.+.....+.+.|+++.+-.....+.. .....|++. +|.|..+....+++| .++++ +
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I--~~~~~-d 527 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKI--KKGGL-N 527 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCE--EBCCS-S
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeE--EEEeC-C
Confidence 4678999999999999999988899999999986543333332 356677887 455444332222332 23333 4
Q ss_pred CcEEeEeeeccccCCcceeeeeec--ceeEEee-cCceeeEEEcccceEEEeec--cccCCCceEEEEeeceeEEEE-ec
Q 015220 267 GTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQ-ENENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTF-RN 340 (411)
Q Consensus 267 G~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQ-e~~~LkI~dL~t~e~~~v~~--T~f~hpsAfifLy~sqlFlSf-sd 340 (411)
|+....+. ...-.-.+-|++.+ ..|++.. ..+.|..+|+..+.+..+.. ..+.+|.++.+ ....+|.+= .+
T Consensus 528 G~~~~~l~--~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glav-d~~~lywtd~~~ 604 (699)
T 1n7d_A 528 GVDIYSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIIN 604 (699)
T ss_dssp SCCCCEES--CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEE-ETTEEEEECSTT
T ss_pred CCCeeEEE--eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEE-ECCEEEEEeCCC
Confidence 54443321 01112345688874 5676665 66789999997655555433 35678988765 556888887 67
Q ss_pred CeEEEEecC-Cceeeeecccc
Q 015220 341 RTVAVWNFR-GELVTSFEDHL 360 (411)
Q Consensus 341 ~tI~iWn~~-Gel~~s~e~H~ 360 (411)
+.|..++.. |+.++.+....
T Consensus 605 ~~V~~~d~~~G~~~~~i~~~~ 625 (699)
T 1n7d_A 605 EAIFSANRLTGSDVNLLAENL 625 (699)
T ss_dssp TCEEEEETTTEEEEECCCTTC
T ss_pred CeEEEEEccCCCceEEeecCC
Confidence 899999975 99888876543
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=93.40 E-value=8.2 Score=39.79 Aligned_cols=232 Identities=14% Similarity=0.087 Sum_probs=142.8
Q ss_pred cccceeeecccccEEEEEeCCC--CceEEEEEe-------ecCCCeEEEEEeEecCCCceeeeEeeehhhh-hh--CCCC
Q 015220 114 SGVCAAFCRETNQRICFLNVTA--DEVIRSLFY-------NKNNDSLITVSVYASDNFSSLRCRSTRIEYI-RR--GKPD 181 (411)
Q Consensus 114 sG~c~af~~~t~~~ic~lN~s~--~evIrsify-------N~~n~slI~vSv~~sd~~s~L~cr~~~~~~i-~~--gk~~ 181 (411)
.+..+.+|..+++..-++..+. ..-.+.|-+ ....+.|+++..+.... ...+++. ++ ++ |+..
T Consensus 161 ~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~---~~~~~V~--~i~r~~~G~~~ 235 (496)
T 3kya_A 161 HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG---DESPSVY--IIKRNADGTFD 235 (496)
T ss_dssp EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG---GGEEEEE--EEECCTTSCCS
T ss_pred CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc---ccCceEE--EEecCCCCcee
Confidence 4567788888777776665432 335788877 77777777754432110 1111111 12 11 2321
Q ss_pred C-C-CcceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEee-------Cc--------------eEEEEeccCc-ee
Q 015220 182 A-G-FALFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-------NY--------------TMLYSISDKN-VQ 237 (411)
Q Consensus 182 ~-~-~~LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~-------~Y--------------s~iysLs~~~-Vq 237 (411)
+ . .-... ...||--+-+|+.+|.+.+....++.+.++|+. +. +.++++.+.. -.
T Consensus 236 ~~~~~~~v~--~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~ 313 (496)
T 3kya_A 236 DRSDIQLIA--AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEF 313 (496)
T ss_dssp TTSCEEEEE--EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCE
T ss_pred ecccceeec--cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCce
Confidence 1 1 01222 478999999999999999999999999999998 22 2466665442 35
Q ss_pred EEEEe-CCEEEEEEecCCCceeeEEEEecCCcEE--eEeeecccc-------------CCcceeeeee--------ccee
Q 015220 238 EIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVL--KSFNHLLHR-------------NKKVDFIEQF--------NEKL 293 (411)
Q Consensus 238 eIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L--~t~~~LL~h-------------~K~I~FLE~~--------~ekl 293 (411)
-|.++ +|..|.+.+..+.+|..-=++-.++++. .++.-..+. +.|-+-+... ...|
T Consensus 314 ~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~l 393 (496)
T 3kya_A 314 QIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDF 393 (496)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEE
T ss_pred EEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeE
Confidence 78888 8887778887777775444566666542 222111010 1233345553 3467
Q ss_pred EEee-cCceeeEEEcccceEEEeecc-----------------------ccCCCceEEEEee-ceeEEEE-ecCeEEEEe
Q 015220 294 LVKQ-ENENLQILDVRNFELTEVSRT-----------------------EFMTPSAFIFLYE-NQLFLTF-RNRTVAVWN 347 (411)
Q Consensus 294 lIKQ-e~~~LkI~dL~t~e~~~v~~T-----------------------~f~hpsAfifLy~-sqlFlSf-sd~tI~iWn 347 (411)
+|+- ++|.|+.+| .+|....+.-+ .|.+|..+.+-.. ..||++= .++.||.++
T Consensus 394 yVaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~ 472 (496)
T 3kya_A 394 YFVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTIS 472 (496)
T ss_dssp EEEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEE
Confidence 7765 889999999 67766654321 3556766554443 5788887 677999999
Q ss_pred cCCcee
Q 015220 348 FRGELV 353 (411)
Q Consensus 348 ~~Gel~ 353 (411)
+.|+..
T Consensus 473 ~~~~~~ 478 (496)
T 3kya_A 473 MEQEEN 478 (496)
T ss_dssp ECCCC-
T ss_pred CCCCcc
Confidence 997744
No 283
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.25 E-value=9 Score=39.86 Aligned_cols=194 Identities=9% Similarity=0.026 Sum_probs=120.6
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEecCC
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDG 267 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG 267 (411)
++.|-=+.||..+|++..+...++.+..+++.....-..+.. .....+++. .|.+ .+.+...++ |.+.++. |
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~L-Y~tD~~~~~--I~v~~~d-G 111 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNL-YWADTGTNR--IEVSKLD-G 111 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE-EEEETTTTE--EEEEETT-S
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEE-EEEECCCCE--EEEEecC-C
Confidence 567888999999999999999999999999977543333332 356677886 4543 344444443 4555654 4
Q ss_pred cEEeEeeeccccCCcceeeeeec--ceeEEeec--CceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-ecC
Q 015220 268 TVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQE--NENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-RNR 341 (411)
Q Consensus 268 ~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe--~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-sd~ 341 (411)
+....+. -..-.....|++.+ ++|++..- +.+|.-.|+--.++..+- +.+.+|..+.+=+ ...||.+= .++
T Consensus 112 ~~~~~l~--~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~ 188 (628)
T 4a0p_A 112 QHRQVLV--WKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTN 188 (628)
T ss_dssp TTCEEEE--CSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTT
T ss_pred CcEEEEE--eCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCC
Confidence 4333311 02224456788874 67788873 578888888766665543 4566887766554 35788887 778
Q ss_pred eEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 342 tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.|...+++|.-.+.+.+... +| ..+++.+ +.|+-. | -.+++|...|..||+
T Consensus 189 ~I~~~d~dG~~~~v~~~~l~-~P----~glav~~--~~ly~t--D-------~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 189 LIESSNMLGLNREVIADDLP-HP----FGLTQYQ--DYIYWT--D-------WSRRSIERANKTSGQ 239 (628)
T ss_dssp EEEEEETTSCSCEEEEECCS-CE----EEEEEET--TEEEEE--E-------TTTTEEEEEETTTCC
T ss_pred EEEEEcCCCCceEEeeccCC-Cc----eEEEEEC--CEEEEe--c-------CCCCEEEEEECCCCC
Confidence 99999999764455554433 33 3455544 333221 2 123466666666664
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=93.18 E-value=5.2 Score=36.94 Aligned_cols=164 Identities=15% Similarity=0.145 Sum_probs=109.5
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceE--EEEeccCceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISDKNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs~~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.-+-+|..+|++.+.....+.+.|+|+..-.. +..-....-..+++. +|.|.......+++ |..+++
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~--I~~~~~- 150 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK--IKKGGL- 150 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE--EEEEET-
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe--EEEEcC-
Confidence 34678999999999999999999999999999976432 222223478899997 46555444322222 233333
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEee-cCceeeEEEcccceEEEeec--cccCCCceEEEEeeceeEEEE-e
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVKQ-ENENLQILDVRNFELTEVSR--TEFMTPSAFIFLYENQLFLTF-R 339 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIKQ-e~~~LkI~dL~t~e~~~v~~--T~f~hpsAfifLy~sqlFlSf-s 339 (411)
+|+....+.. ..-.-.+-|.+. .+.+++.. +.+.|..+|+..+.+..+.. ..+.||.++.. ....+|.+= .
T Consensus 151 dG~~~~~~~~--~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav-~~~~ly~~d~~ 227 (316)
T 1ijq_A 151 NGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDII 227 (316)
T ss_dssp TSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEE-ETTEEEEEETT
T ss_pred CCCCeEEEEE--CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEE-ECCEEEEEECC
Confidence 6776555321 112335567787 45676665 66799999997655554432 34678988655 677899888 7
Q ss_pred cCeEEEEecC-Cceeeeeccc
Q 015220 340 NRTVAVWNFR-GELVTSFEDH 359 (411)
Q Consensus 340 d~tI~iWn~~-Gel~~s~e~H 359 (411)
++.|...+.. |+.++.+...
T Consensus 228 ~~~V~~~~~~~g~~~~~i~~~ 248 (316)
T 1ijq_A 228 NEAIFSANRLTGSDVNLLAEN 248 (316)
T ss_dssp TTEEEEEETTTCCCCEEEECS
T ss_pred CCeEEEEeCCCCcceEEEecC
Confidence 7899999974 8877766543
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.96 E-value=9.6 Score=39.39 Aligned_cols=170 Identities=14% Similarity=0.144 Sum_probs=100.1
Q ss_pred CCCe-EEEeecCCCeEEEEEeeCceEE-EE-----eccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEee
Q 015220 203 VNGK-VLTYSAQDSIYKVFDLKNYTML-YS-----ISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 203 ~NGk-iLt~~~~ds~ykVWdL~~Ys~i-ys-----Ls~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~ 274 (411)
.+|+ +.+.. .++-+-+||.++.+.. +. +....|..+... +|.+.+-.. . -|.+++.++++...-..
T Consensus 415 ~~g~~lWigt-~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~---Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 415 EKKSLVYIGT-HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--S---ALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp TTTTEEEEEE-TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--S---CEEEEETTTTEEEECCB
T ss_pred CCCCEEEEEe-CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--C---ceeEEeCCCCeEEEccc
Confidence 4555 44432 2234556676665432 11 344577777776 566443322 1 37778888886543211
Q ss_pred e----ccccCCcceeeeeecc-eeEEeecCceeeEEEcccceEEEeec---cccCCCceEEEEeec---eeEEEEecCeE
Q 015220 275 H----LLHRNKKVDFIEQFNE-KLLVKQENENLQILDVRNFELTEVSR---TEFMTPSAFIFLYEN---QLFLTFRNRTV 343 (411)
Q Consensus 275 ~----LL~h~K~I~FLE~~~e-kllIKQe~~~LkI~dL~t~e~~~v~~---T~f~hpsAfifLy~s---qlFlSfsd~tI 343 (411)
. -+ +...|..|....+ .+.|... +-|-.||..+++. .... ..-.....+.++++. +++++-.+ -+
T Consensus 489 ~~~~~~~-~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl 564 (795)
T 4a2l_A 489 EKDGTPV-VSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE-GF 564 (795)
T ss_dssp CTTCCBC-CCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-CE
T ss_pred ccccccc-CCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-Cc
Confidence 0 11 1245666655544 4667766 6799999998876 4321 111123356667763 56666554 78
Q ss_pred EEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 344 AVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 344 ~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
-.||.....++.+....+. |+-.+..++..++|.+-++.
T Consensus 565 ~~~d~~~~~~~~~~~~~gl-~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 565 YCFNEKDKQIKRYNTTNGL-PNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp EEEETTTTEEEEECGGGTC-SCSCEEEEEECTTSCEEEEE
T ss_pred eeECCCCCcEEEeCCCCCC-chhheEEEEECCCCCEEEEc
Confidence 8899987766766544332 34457888899999999987
No 286
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.92 E-value=7.5 Score=38.02 Aligned_cols=251 Identities=11% Similarity=0.062 Sum_probs=132.6
Q ss_pred ceehhhhccccceeeecccccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCCCCCCCc
Q 015220 106 DIVFALAQSGVCAAFCRETNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGKPDAGFA 185 (411)
Q Consensus 106 dii~~L~~sG~c~af~~~t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk~~~~~~ 185 (411)
+.|++....+.-..||..+++.. .+.. ...--+.|-+....+.|+++. +.... +.-+... ..+.|.+.....
T Consensus 150 g~Lyv~d~~~~I~~id~~~~~v~-~~~~-~~~~P~~ia~d~~G~~lyvad-~~~~~---~~~~v~~--~~~~g~~~~~~~ 221 (430)
T 3tc9_A 150 NHLYLVGEQHPTRLIDFEKEYVS-TVYS-GLSKVRTICWTHEADSMIITN-DQNNN---DRPNNYI--LTRESGFKVITE 221 (430)
T ss_dssp EEEEEEEBTEEEEEEETTTTEEE-EEEC-CCSCEEEEEECTTSSEEEEEE-CCSCT---TSEEEEE--EEGGGTSCSEEE
T ss_pred CeEEEEeCCCcEEEEECCCCEEE-EEec-CCCCcceEEEeCCCCEEEEEe-CCCCc---ccceEEE--EeCCCceeeeee
Confidence 33443333355566776655433 3333 333455666666666555533 21111 1111111 112343321111
Q ss_pred ceeecccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceE--EEEeccC-ceeEEEEe-CCEEEEEEecCCCceeeEE
Q 015220 186 LFESESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTM--LYSISDK-NVQEIKIS-PGIMLLIFTKASGHVPLKI 261 (411)
Q Consensus 186 LF~~~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs~~-~VqeIkIS-dG~~Lai~q~t~~~ipiKI 261 (411)
+ ..+.+|-.+-+|..+|.+.+....++.+.+|++.+.+. +..+.+. .-.-+.++ +|..|.+.+..++++..-=
T Consensus 222 l---~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 222 L---TKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp E---EECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred e---ccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2 24789999999999999999998899999999987653 3344322 34457777 6765666665555544332
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEee---------c
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYE---------N 332 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~---------s 332 (411)
++-.+|+...... +.+. ++ +.+ ...+ ......|.+|..-+|+.. .
T Consensus 299 ~d~~~~~~~~~~~-~ag~---------~g------~~g-------~~dg---~~~~a~~~~P~~gv~v~~~~y~~~D~~g 352 (430)
T 3tc9_A 299 YDWKTKRLTTPYI-VCGQ---------QG------AKD-------WVDG---VGKKARMHAPRQGTFVKNPAYKGSSDEY 352 (430)
T ss_dssp EETTTTEECCCEE-EEEC---------TT------CBC-------CBCE---EGGGCBBSSEEEEEEEECGGGTTSSCCE
T ss_pred CCcccccccceEE-Eecc---------CC------CCC-------CCCC---CCcceEeCCCcceEEEccccccccCCCC
Confidence 3322333211000 0000 00 000 0001 112345778886677753 3
Q ss_pred eeEEEE-ecCeEEEEecCCceeeeeccc-----ccc--------CCCCccceEEEcC-CCCEEEEEecCCCCCccccCCc
Q 015220 333 QLFLTF-RNRTVAVWNFRGELVTSFEDH-----LLW--------HPDCNTNNIYITS-DQDLIISYCKADSDDPLAEGNG 397 (411)
Q Consensus 333 qlFlSf-sd~tI~iWn~~Gel~~s~e~H-----~~~--------~~~c~~n~i~Is~-Dqd~iiS~~~d~~~~~~~~~~g 397 (411)
.+|++= .++.|+.++.+|.+.+-. +. .+| +.-..-..|+++| +|.++|+=... .
T Consensus 353 ~lyvaD~~n~~I~~i~~~G~v~~~~-g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n----------~ 421 (430)
T 3tc9_A 353 DFYFCDRENHCIRILTPQGRVTTFA-GRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDREN----------R 421 (430)
T ss_dssp EEEEEEGGGTEEEEECTTSEEEEEE-ECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGG----------T
T ss_pred eEEEEECCCcEEEEECCCCcEEEEE-eCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCC----------C
Confidence 788887 678999999889755432 22 111 1122457899999 57787774433 3
Q ss_pred eEEEeee
Q 015220 398 KLFVSLL 404 (411)
Q Consensus 398 tI~i~~i 404 (411)
.|...++
T Consensus 422 rIr~i~~ 428 (430)
T 3tc9_A 422 RIRKIGY 428 (430)
T ss_dssp EEEEEEE
T ss_pred eEEEEcc
Confidence 6666554
No 287
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.89 E-value=4.9 Score=35.79 Aligned_cols=194 Identities=8% Similarity=0.025 Sum_probs=110.5
Q ss_pred CCeEEEeecCC-----CeEEEEEeeCce-----EEEEeccC-ceeEEEEeCCEEEEEEecCCC--ceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQD-----SIYKVFDLKNYT-----MLYSISDK-NVQEIKISPGIMLLIFTKASG--HVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~d-----s~ykVWdL~~Ys-----~iysLs~~-~VqeIkISdG~~Lai~q~t~~--~ipiKIl~I~tG~~L 270 (411)
+++++++++.+ +.+-+||+.+.+ .+-.+... .-..+.+.++.++++.-.... ...+-++|+.+++-.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 141 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWS 141 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEE
Confidence 56777777643 456677776643 44333322 222333347777777644332 335778888887744
Q ss_pred eEeeeccccCCcceeeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e----
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R---- 339 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s---- 339 (411)
.-. .++....-......++++++--+ .+.+.+||+.+++-.+++..-......-.++...++|+.+ .
T Consensus 142 ~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 142 MLG--DMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA 219 (301)
T ss_dssp EEE--ECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS
T ss_pred ECC--CCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc
Confidence 422 23333333456667888877643 4678999999998888743322111222334456888887 3
Q ss_pred -cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 -NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 -d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+.+||+.-.--+.+.. +. .+-+.-..+.+ ++.+++-|..+.. .....|-++|+.+++
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~--~~~i~v~GG~~~~-----~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTS-MT-TPRCYVGATVL--RGRLYAIAGYDGN-----SLLSSIECYDPIIDS 280 (301)
T ss_dssp BCCCEEEEETTTTEEEEECC-CS-SCCBSCEEEEE--TTEEEEECCBCSS-----SBEEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCcEEECCC-CC-CcccceeEEEE--CCEEEEEcCcCCC-----cccccEEEEcCCCCe
Confidence 3578999998443333321 11 22222223333 7777777765531 123678889988765
No 288
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.44 E-value=7.2 Score=36.63 Aligned_cols=162 Identities=14% Similarity=0.092 Sum_probs=108.1
Q ss_pred cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEec
Q 015220 190 ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIE 265 (411)
Q Consensus 190 ~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~ 265 (411)
..+..|.=+-+|..+|.+.......+.+.|+++..-..-.-+.+ ..-..|++. .|.|.......+.+ |..+++
T Consensus 76 ~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~--I~r~~~- 152 (318)
T 3sov_A 76 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK--IERAGM- 152 (318)
T ss_dssp ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCE--EEEEET-
T ss_pred CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCE--EEEEEc-
Confidence 34678999999999999999999999999999976432222222 267788887 46665554343343 223333
Q ss_pred CCcEEeEeeeccccCCcceeeeee--cceeEEe-ecCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ecC
Q 015220 266 DGTVLKSFNHLLHRNKKVDFIEQF--NEKLLVK-QENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RNR 341 (411)
Q Consensus 266 tG~~L~t~~~LL~h~K~I~FLE~~--~ekllIK-Qe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd~ 341 (411)
+|+....+.. ..-.-.+-|.+. .+.|++. .+.+.|..+|+..+.+..+......+|.+... ....+|.+= .++
T Consensus 153 dG~~~~~~~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav-~~~~lywtd~~~~ 229 (318)
T 3sov_A 153 DGSSRFIIIN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTL-FEDILYWTDWSTH 229 (318)
T ss_dssp TSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEE-ETTEEEEEETTTT
T ss_pred CCCCeEEEEE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEE-eCCEEEEEecCCC
Confidence 5654444210 111233567777 4566665 46789999999765555554456789988764 677899997 778
Q ss_pred eEEEEecC-Cceeeeec
Q 015220 342 TVAVWNFR-GELVTSFE 357 (411)
Q Consensus 342 tI~iWn~~-Gel~~s~e 357 (411)
.|...|.. |+..+.+.
T Consensus 230 ~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 230 SILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTCCSCEEEE
T ss_pred eEEEEECCCCCceEEEe
Confidence 99999995 88665543
No 289
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.34 E-value=5.9 Score=35.43 Aligned_cols=194 Identities=6% Similarity=-0.031 Sum_probs=111.8
Q ss_pred CCeEEEeecCC----CeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecC---CCceeeEEEEecCCcEEeEe
Q 015220 204 NGKVLTYSAQD----SIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKA---SGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 204 NGkiLt~~~~d----s~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t---~~~ipiKIl~I~tG~~L~t~ 273 (411)
++++++.++.+ +..-+||..+.+ .+-.+... .-..+.+-++.++++.-.. ....-+-++|+.+++-..--
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC
Confidence 56777776643 566677777654 44444422 1222333477777776543 22345677888888643321
Q ss_pred eeccccCCcceeeeeecceeEEeec----------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ec--
Q 015220 274 NHLLHRNKKVDFIEQFNEKLLVKQE----------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN-- 340 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ekllIKQe----------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd-- 340 (411)
.++....-..+...++++++--+ .+.+.+||+.+.+-.+++........+-.++...++|+.+ .+
T Consensus 135 --~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 135 --SMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL 212 (306)
T ss_dssp --CCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred --CCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC
Confidence 23333334456677888887654 5668899999998888754332222223344466888887 32
Q ss_pred ---CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 341 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 341 ---~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+.+.+||+.-+--+.+.. +. .+-..-..+.+ ++.++|-|..+.. .....+-++|+.+.+
T Consensus 213 ~~~~~~~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~--~~~i~v~GG~~~~-----~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMVSP-MP-WKGVTVKCAAV--GSIVYVLAGFQGV-----GRLGHILEYNTETDK 274 (306)
T ss_dssp EEBCCEEEEETTTTEEEECCC-CS-CCBSCCEEEEE--TTEEEEEECBCSS-----SBCCEEEEEETTTTE
T ss_pred CCCceEEEeeCCCCcEEECCC-CC-CCccceeEEEE--CCEEEEEeCcCCC-----eeeeeEEEEcCCCCe
Confidence 578889988443333321 11 12222222333 7778888776531 123588899988865
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.15 E-value=12 Score=38.70 Aligned_cols=175 Identities=10% Similarity=0.107 Sum_probs=111.9
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCceEEEEecc--CceeEEEEe--CCEEEEEEecCCCceeeEEEEecCC
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNYTMLYSISD--KNVQEIKIS--PGIMLLIFTKASGHVPLKILSIEDG 267 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs~--~~VqeIkIS--dG~~Lai~q~t~~~ipiKIl~I~tG 267 (411)
++.|-=+.||..+|++..+....+.+..+++.+...-..+.. ....-+++. .|.+ .+.+...+++ .+.++. |
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~l-Y~tD~~~~~I--~v~~~~-G 423 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNL-YWTDTGTDRI--EVTRLN-G 423 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE-EEEETTTTEE--EEEETT-S
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcE-EEEeCCCCcE--EEEeCC-C
Confidence 566777999999999999999999999999987433222332 256678886 4554 3444444444 456664 4
Q ss_pred cEEeEeeeccccCCcceeeeeec--ceeEEeecC--ceeeEEEcccceEEEeeccccCCCceEEEEe-eceeEEEE-ecC
Q 015220 268 TVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQEN--ENLQILDVRNFELTEVSRTEFMTPSAFIFLY-ENQLFLTF-RNR 341 (411)
Q Consensus 268 ~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~--~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy-~sqlFlSf-sd~ 341 (411)
+....+. -..-.....|++.+ +++++.--+ .+|.-.++--..+..+-.+.+..|.....=+ ...||.+= ..+
T Consensus 424 ~~~~~l~--~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~ 501 (619)
T 3s94_A 424 TMRKILI--SEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTD 501 (619)
T ss_dssp CSCEEEE--CTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CeEEEEE--ECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCC
Confidence 4333311 12234566788885 577777633 5677777765555555556677888754443 45888887 667
Q ss_pred eEEEEecCCceeeeeccccccCCCCccceEEEcCC
Q 015220 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSD 376 (411)
Q Consensus 342 tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~D 376 (411)
+|+..+++|.-.+++-...+.||. .|++.+|
T Consensus 502 ~I~~~~~dG~~~~~~~~~~l~~P~----glav~~~ 532 (619)
T 3s94_A 502 KIEVMNTDGTGRRVLVEDKIPHIF----GFTLLGD 532 (619)
T ss_dssp EEEEEESSSCCCEEEEECCCCSSC----CEEEETT
T ss_pred EEEEEecCCCceEEEeccCCCCcE----EEEEECC
Confidence 999999998866666443444443 4555443
No 291
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.08 E-value=6.3 Score=35.18 Aligned_cols=194 Identities=10% Similarity=0.046 Sum_probs=108.3
Q ss_pred CCeEEEeecCC-----CeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecCCCc--eeeEEEEecCCcEEeEe
Q 015220 204 NGKVLTYSAQD-----SIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKASGH--VPLKILSIEDGTVLKSF 273 (411)
Q Consensus 204 NGkiLt~~~~d-----s~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t~~~--ipiKIl~I~tG~~L~t~ 273 (411)
++++++.++.+ +.+-+||..+.+ .+-.+... .-..+.+-+|.++++.-..... .-+-++|+.+.+-..-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC
Confidence 56777776643 345667766644 33333322 1223333477777776544322 34667787777644321
Q ss_pred eeccccCCcceeeeeecceeEEeec--------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ec----
Q 015220 274 NHLLHRNKKVDFIEQFNEKLLVKQE--------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN---- 340 (411)
Q Consensus 274 ~~LL~h~K~I~FLE~~~ekllIKQe--------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd---- 340 (411)
.++...--..+...++++++--+ ...+.+||+.+++-.+++..-......-.++...++|+.+ .+
T Consensus 141 --~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 141 --PMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLV 218 (302)
T ss_dssp --CCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSB
T ss_pred --CCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcc
Confidence 23333333456667888887632 4568999999998888643322111222334466888887 32
Q ss_pred -CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 341 -RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 341 -~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+.+.+||+...--+.+... |.+-...-...-++.++|-|..+.. ....++-++|+.+++
T Consensus 219 ~~~~~~yd~~~~~W~~~~~~----~~~r~~~~~~~~~~~i~v~GG~~~~-----~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVADM----NMCRRNAGVCAVNGLLYVVGGDDGS-----CNLASVEYYNPTTDK 278 (302)
T ss_dssp CCCEEEEETTTTEEEEECCC----SSCCBSCEEEEETTEEEEECCBCSS-----SBCCCEEEEETTTTE
T ss_pred cceEEEEeCCCCCEeeCCCC----CCccccCeEEEECCEEEEECCcCCC-----cccccEEEEcCCCCe
Confidence 5788999885444443321 1111222233337778777765531 223678899988765
No 292
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.65 E-value=7 Score=34.78 Aligned_cols=195 Identities=8% Similarity=-0.010 Sum_probs=110.1
Q ss_pred CCCeEEEeec-CC-----CeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecCC--CceeeEEEEecCCc---
Q 015220 203 VNGKVLTYSA-QD-----SIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGT--- 268 (411)
Q Consensus 203 ~NGkiLt~~~-~d-----s~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t~--~~ipiKIl~I~tG~--- 268 (411)
.+++++++++ .+ +.+.+||+.+.+ .+-.+... .-..+...++.++++.-... ...-+-++|+.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 5677888777 32 355667776654 22223322 22333444777777655432 23457789999887
Q ss_pred EEeEeeeccccCCcceeeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e--
Q 015220 269 VLKSFNHLLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R-- 339 (411)
Q Consensus 269 ~L~t~~~LL~h~K~I~FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s-- 339 (411)
-..- -.++....-..+...++++++--+ .+.+-+||+.+++-.+++.........-.+++..++|+.+ .
T Consensus 93 W~~~--~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 93 WYSV--APMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp CEEE--CCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEEC--CCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC
Confidence 2221 123333333455666788877643 3578999999998887654322111122233456888876 3
Q ss_pred ---cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 ---NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 ---d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+.++|+...--+.+.. + -.+-+. .....-++.+++.|..+.. ....++-++|+.|++
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~-~-p~~r~~--~~~~~~~~~i~v~GG~~~~-----~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTP-M-ATKRSG--AGVALLNDHIYVVGGFDGT-----AHLSSVEAYNIRTDS 233 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECC-C-SSCCBS--CEEEEETTEEEEECCBCSS-----SBCCCEEEEETTTTE
T ss_pred CcccceEEEEeCCCCcEEeCCC-C-Cccccc--ceEEEECCEEEEEeCCCCC-----cccceEEEEeCCCCc
Confidence 3578899988554443321 1 122222 2233337788888776541 114578889988875
No 293
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.57 E-value=4.3 Score=40.96 Aligned_cols=152 Identities=15% Similarity=0.218 Sum_probs=100.8
Q ss_pred eEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE--ee---eccccCCcceeeeeecceeEEeecCceeeEEEcccce
Q 015220 237 QEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS--FN---HLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFE 311 (411)
Q Consensus 237 qeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t--~~---~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e 311 (411)
..+++....++-+.+.......+-|.|++++.-... .. -+.|++++|=.| + .+..|||.||.+++
T Consensus 29 ~~lTmESDkyicVrE~~~~~~~VvIiDl~n~~~~~Rrpi~AdsAIMnP~~~ViAL---------r-ag~~LQiFnletK~ 98 (365)
T 2xzh_A 29 STLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIAL---------K-AGKTLQIFNIEMKS 98 (365)
T ss_dssp TTEEEEETTEEEEEEEETTEEEEEEEETTSTTSCEEEECCCSEEEECSSSSEEEE---------E-ETTEEEEEETTTTE
T ss_pred ceeeeecCceEEEEecCCCCCEEEEEECCCCCCccccccccceeeeCCCccEEEE---------e-cCCeEEEechHHhh
Confidence 445666566677777766667899999998665421 00 133444443322 2 48899999999999
Q ss_pred EEEeeccccCCCceEEEEe-ec-eeEEEEecCeEEEEecCC--ceeeeeccccccCCCCccceEEEcCCCCEEE-EEecC
Q 015220 312 LTEVSRTEFMTPSAFIFLY-EN-QLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTNNIYITSDQDLII-SYCKA 386 (411)
Q Consensus 312 ~~~v~~T~f~hpsAfifLy-~s-qlFlSfsd~tI~iWn~~G--el~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii-S~~~d 386 (411)
..+ +.-| ++-++|-- ++ +.+.-..++.|--|+..| +|+.=|+.|.... +|.+=+--.++|++.++ .|=..
T Consensus 99 klk---s~~~-~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~ 173 (365)
T 2xzh_A 99 KMK---AHTM-TDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISA 173 (365)
T ss_dssp EEE---EEEC-SSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGT-TCEEEEEEECTTSCEEEEEEEEE
T ss_pred hhc---ceec-CCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcc-cceEEEEEECCCCCEEEEEeEec
Confidence 998 4443 56666632 44 444444899999999996 5999999999986 68888888888888543 34322
Q ss_pred CCCCccccCCceEEEeeecce
Q 015220 387 DSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 387 ~~~~~~~~~~gtI~i~~i~tG 407 (411)
. ++ .-.|.|-++..+-+
T Consensus 174 ~--~~--~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 174 Q--QN--RVVGAMQLYSVDRK 190 (365)
T ss_dssp E--TT--EEEEEEEEEETTTT
T ss_pred c--CC--ccceeEEEEeeccc
Confidence 1 11 11277777765543
No 294
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=91.44 E-value=3.9 Score=42.21 Aligned_cols=118 Identities=9% Similarity=0.048 Sum_probs=77.5
Q ss_pred cceeEEe-ecCceeeEEEcccc----eEEEee-------ccccCCCceEEEEeeceeEEEE-ec------CeEEEEecC-
Q 015220 290 NEKLLVK-QENENLQILDVRNF----ELTEVS-------RTEFMTPSAFIFLYENQLFLTF-RN------RTVAVWNFR- 349 (411)
Q Consensus 290 ~ekllIK-Qe~~~LkI~dL~t~----e~~~v~-------~T~f~hpsAfifLy~sqlFlSf-sd------~tI~iWn~~- 349 (411)
..++++- ..++.|-++|+.+. ++.++- ++..--|-.++++... +++|. .+ +.|.+.|..
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 3455553 46788999999876 555533 2222246666777666 99988 55 699999999
Q ss_pred CceeeeeccccccCCCCccceEEEcCCCCEEEEEecC---------CCCCccccCCceEEEeeecceeee
Q 015220 350 GELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA---------DSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 350 Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d---------~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++++.+.+--.. |.-.-..+..+||+++++|-.=. ...+-..+...+|.+||+.+||.+
T Consensus 174 ~~v~~~~~~~~~--~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~ 241 (462)
T 2ece_A 174 FEPLGKWEIDRG--DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRI 241 (462)
T ss_dssp CCEEEECCSBCT--TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEE
T ss_pred CeEEEEEccCCC--CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEe
Confidence 999998872211 22233457889999999987510 001111134579999999998864
No 295
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.29 E-value=8.1 Score=34.86 Aligned_cols=194 Identities=9% Similarity=-0.030 Sum_probs=106.7
Q ss_pred CCeEEEeecC---------CCeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecCCC--ceeeEEEEecCCcE
Q 015220 204 NGKVLTYSAQ---------DSIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKASG--HVPLKILSIEDGTV 269 (411)
Q Consensus 204 NGkiLt~~~~---------ds~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t~~--~ipiKIl~I~tG~~ 269 (411)
++++++.++. .+.+-+||+.+-+ .+-.+... .-..+.+-+|.++++.-.... ..-+-++|+.+++-
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEW 149 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeE
Confidence 5667776664 1345667776644 22222221 112233337777777543322 23466788888764
Q ss_pred EeEeeeccccCCcceeeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ec--
Q 015220 270 LKSFNHLLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN-- 340 (411)
Q Consensus 270 L~t~~~LL~h~K~I~FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd-- 340 (411)
..-. .++....-......++++++--+ ...+.+||+.+.+-..++..-..-...-.++..+++|+.+ .+
T Consensus 150 ~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 227 (308)
T 1zgk_A 150 HLVA--PMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQ 227 (308)
T ss_dssp EECC--CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred eECC--CCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCC
Confidence 4321 22333333455666888877643 4678999999998887643221111112234466888887 43
Q ss_pred ---CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 341 ---RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 341 ---~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
+.+.+||+..+--+.+.. +. .+-+.-..+. -++.++|-|..+. .....++-++|+.+.+
T Consensus 228 ~~~~~v~~yd~~~~~W~~~~~-~p-~~r~~~~~~~--~~~~i~v~GG~~~-----~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 228 DQLNSVERYDVETETWTFVAP-MK-HRRSALGITV--HQGRIYVLGGYDG-----HTFLDSVECYDPDTDT 289 (308)
T ss_dssp SBCCCEEEEETTTTEEEECCC-CS-SCCBSCEEEE--ETTEEEEECCBCS-----SCBCCEEEEEETTTTE
T ss_pred CccceEEEEeCCCCcEEECCC-CC-CCccceEEEE--ECCEEEEEcCcCC-----CcccceEEEEcCCCCE
Confidence 678999988553333331 11 1222222222 3778888776553 1223688899988875
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.61 E-value=16 Score=37.73 Aligned_cols=172 Identities=16% Similarity=0.170 Sum_probs=99.6
Q ss_pred CCCCeEEEeecCCCeEEEEEeeCceE--EEEec-----cCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEe
Q 015220 202 DVNGKVLTYSAQDSIYKVFDLKNYTM--LYSIS-----DKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 202 d~NGkiLt~~~~ds~ykVWdL~~Ys~--iysLs-----~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~ 273 (411)
|.+|++.+... +-+-+||.++.+. +.... ...|..+... +|.+.+-. ..+. |-.++..+++..+ +
T Consensus 458 d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~~G---l~~~~~~~~~~~~-~ 530 (781)
T 3v9f_A 458 DKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT-FGGG---VGIYTPDMQLVRK-F 530 (781)
T ss_dssp CTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE-SSSC---EEEECTTCCEEEE-E
T ss_pred CCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE-cCCC---EEEEeCCCCeEEE-c
Confidence 45666666443 3355567665442 22222 3467777666 66544332 2111 4457766665433 1
Q ss_pred ee--ccccCCcceeeeee-cceeEEeecCcee-eEEEcccceEEEeeccccCCCc-eEEEEeec---eeEEEEecCeEEE
Q 015220 274 NH--LLHRNKKVDFIEQF-NEKLLVKQENENL-QILDVRNFELTEVSRTEFMTPS-AFIFLYEN---QLFLTFRNRTVAV 345 (411)
Q Consensus 274 ~~--LL~h~K~I~FLE~~-~ekllIKQe~~~L-kI~dL~t~e~~~v~~T~f~hps-AfifLy~s---qlFlSfsd~tI~i 345 (411)
.. -| ....|..|... .+.+.|... +-| ..||..+++...... .-+.|. .+..+++. .++++. ++-|-.
T Consensus 531 ~~~~~l-~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~~~~~-~~gl~~~~i~~i~~d~~g~lW~~t-~~Gl~~ 606 (781)
T 3v9f_A 531 NQYEGF-CSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQVFQR-KEGLPNTHIRAISEDKNGNIWAST-NTGISC 606 (781)
T ss_dssp CTTTTC-SCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCEEECG-GGTCSCCCCCEEEECSSSCEEEEC-SSCEEE
T ss_pred cCCCCC-CCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEEEccc-cCCCCCceEEEEEECCCCCEEEEc-CCceEE
Confidence 11 12 23455666554 445667666 556 889998887665432 223343 34444443 577765 455888
Q ss_pred EecCCceeeeecccccc-CCCCccceEEEcCCCCEEEEEe
Q 015220 346 WNFRGELVTSFEDHLLW-HPDCNTNNIYITSDQDLIISYC 384 (411)
Q Consensus 346 Wn~~Gel~~s~e~H~~~-~~~c~~n~i~Is~Dqd~iiS~~ 384 (411)
++++...++.+...-+. ...++.+.++.++||.+.+++.
T Consensus 607 ~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~ 646 (781)
T 3v9f_A 607 YITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSI 646 (781)
T ss_dssp EETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEET
T ss_pred EECCCCceEEecccCCccccccccCceEECCCCEEEEECC
Confidence 89997777777655443 2345668899999999999874
No 297
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.49 E-value=5.9 Score=41.44 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=60.8
Q ss_pred EEeeCCCCeEEEeecCC-----CeEEEEEeeCc-eEEE-EeccCceeEEEEe-CCEEEEEEecCCCce--eeEEEEecCC
Q 015220 198 VEFDDVNGKVLTYSAQD-----SIYKVFDLKNY-TMLY-SISDKNVQEIKIS-PGIMLLIFTKASGHV--PLKILSIEDG 267 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~d-----s~ykVWdL~~Y-s~iy-sLs~~~VqeIkIS-dG~~Lai~q~t~~~i--piKIl~I~tG 267 (411)
+.|-.+||+-|+|..+. .++.|+|+.+. +.+- .+. .-...+..| ||.-|+......+.- -|.++++.|+
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~-~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS-GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE-EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSC
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc-CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 45544789988876552 36999999998 6321 121 123467777 774444333322333 3666777777
Q ss_pred cEEeEeeeccccCCcceeeeeecce--eEEee---cCceeeEEEcccc
Q 015220 268 TVLKSFNHLLHRNKKVDFIEQFNEK--LLVKQ---ENENLQILDVRNF 310 (411)
Q Consensus 268 ~~L~t~~~LL~h~K~I~FLE~~~ek--llIKQ---e~~~LkI~dL~t~ 310 (411)
+......+--....-.-.+..++|+ |++.+ ....|.++|+.++
T Consensus 258 ~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 258 QSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp GGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred chhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 5322211000111111224567765 44444 4567888999886
No 298
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.29 E-value=18 Score=37.24 Aligned_cols=173 Identities=10% Similarity=0.054 Sum_probs=101.4
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEE----EeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecCCcEEeEeeecc
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLY----SISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLL 277 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iy----sLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL 277 (411)
.+|.+.+... ++-+-++|.++.+.-. .+....|..+... +|.+.+ ... --|-+++.++++..+-.. .-
T Consensus 416 ~~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~----~Gl~~~~~~~~~~~~~~~-~~ 488 (781)
T 3v9f_A 416 SEGNLWFGTY-LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH----AGVFVIDLASKKVIHHYD-TS 488 (781)
T ss_dssp TTSCEEEEET-TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET----TEEEEEESSSSSCCEEEC-TT
T ss_pred CCCCEEEEec-cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC----CceEEEeCCCCeEEeccc-Cc
Confidence 4555555322 2334445555443221 1234577777766 666444 322 136678888887644211 10
Q ss_pred ---ccCCcceeeeee-cceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---eeEEEEecCeEEEEecCC
Q 015220 278 ---HRNKKVDFIEQF-NEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---QLFLTFRNRTVAVWNFRG 350 (411)
Q Consensus 278 ---~h~K~I~FLE~~-~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---qlFlSfsd~tI~iWn~~G 350 (411)
.....|..|..- .+.+.|...+.-|-.||..+++........-.....+..+++. .++++-.++-|-.||...
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~ 568 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARN 568 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTT
T ss_pred ccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCC
Confidence 013456666554 4456778776779999998887766543222122345566653 667666655548899986
Q ss_pred ceeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 351 ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 351 el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
.-++.+....+. |+-.+..++..++|.+-++.
T Consensus 569 ~~~~~~~~~~gl-~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 569 FDYQVFQRKEGL-PNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp CCCEEECGGGTC-SCCCCCEEEECSSSCEEEEC
T ss_pred CcEEEccccCCC-CCceEEEEEECCCCCEEEEc
Confidence 656666554443 34457889999999998885
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=89.91 E-value=5.5 Score=41.67 Aligned_cols=131 Identities=15% Similarity=0.282 Sum_probs=93.4
Q ss_pred eeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE--e---eeccccCCcceeeeeecceeEEeecCceeeEEEcccc
Q 015220 236 VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS--F---NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF 310 (411)
Q Consensus 236 VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t--~---~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~ 310 (411)
+..+++....++-+.+.......+-|.|+.++.-... . .-+.|++++|=.|- .+..|||.||.++
T Consensus 27 f~~~TmESDkyicVrE~~~~~~~vvIiDl~~~~~~~rrpi~AdsAIMnP~~~iiALr----------ag~~lQiFnle~K 96 (494)
T 1bpo_A 27 FSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALK----------AGKTLQIFNIEMK 96 (494)
T ss_dssp TTTEEEEETTEEEEEECCTTCCEEEEEETTSTTSCEEEECCCSEEEECSSSSCEEEE----------ETTEEEEEETTTT
T ss_pred cceeeeecCceEEEEecCCCCCeEEEEECCCCCcceecccccceeeeCCCCcEEEEe----------cCCeEEEEchHHh
Confidence 3445666666778888777777899999998654421 0 02345555443332 4899999999999
Q ss_pred eEEEeeccccCCCceEEEE-eec-eeEEEEecCeEEEEecCC--ceeeeeccccccCCCCccceEEEcCCCCEEE
Q 015220 311 ELTEVSRTEFMTPSAFIFL-YEN-QLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 311 e~~~v~~T~f~hpsAfifL-y~s-qlFlSfsd~tI~iWn~~G--el~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
+..+ +.-| ++-++|- -++ +.+.-..++.|--|+..| +|+.=|+.|.... +|.+=+--.++|++.++
T Consensus 97 ~klk---s~~~-~e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~ 166 (494)
T 1bpo_A 97 SKMK---AHTM-TDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLL 166 (494)
T ss_dssp EEEE---EEEC-SSCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGGT-TCEEEEEEECTTSSEEE
T ss_pred hhhc---ceec-CCCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhcc-cceEEEEEECCCCCeEE
Confidence 9988 4443 4555552 244 444445899999999987 4999999999886 78888888899998765
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=89.78 E-value=17 Score=35.99 Aligned_cols=163 Identities=10% Similarity=0.102 Sum_probs=91.8
Q ss_pred cCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeCc--eEEEEecc-----C---ceeEEEE----eCCEEEEEEecC----
Q 015220 192 LKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKNY--TMLYSISD-----K---NVQEIKI----SPGIMLLIFTKA---- 253 (411)
Q Consensus 192 l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~Y--s~iysLs~-----~---~VqeIkI----SdG~~Lai~q~t---- 253 (411)
-.+|.=+.||+.+|+.++++.-.+++-+||..+. +.+ .+.+ + .++-+.+ .+|.++++....
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 3478889999999999999999999999999743 333 4443 1 4567777 366666654421
Q ss_pred ------CCceeeEEEEec---CCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEcccceEEEeeccccCCCc
Q 015220 254 ------SGHVPLKILSIE---DGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPS 324 (411)
Q Consensus 254 ------~~~ipiKIl~I~---tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hps 324 (411)
....-+..+++. ||+++..+.+ =+..+.++ - +++ +.++.+-
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL-~~~~~~~~--~--------------------~~g-------~~~~~~n 140 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNF-EKVQDEFE--K--------------------KAG-------KRPFGVV 140 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEES-HHHHHHHH--H--------------------HHS-------SCCEEEE
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecC-cccccccc--c--------------------ccc-------ccccCCc
Confidence 123446666777 7777665431 00000000 0 000 0000000
Q ss_pred eEEEEeec-eeEEEE-ec-CeEEEEecCCceeeeecccc-ccCCCCccceEEEcCCCCEEEEEecC
Q 015220 325 AFIFLYEN-QLFLTF-RN-RTVAVWNFRGELVTSFEDHL-LWHPDCNTNNIYITSDQDLIISYCKA 386 (411)
Q Consensus 325 AfifLy~s-qlFlSf-sd-~tI~iWn~~Gel~~s~e~H~-~~~~~c~~n~i~Is~Dqd~iiS~~~d 386 (411)
=+.+... +.|+++ .- +.|-..+++|..+..+.-.. .-...|.-|=|+++|||.+|+.--.+
T Consensus 141 -DvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 141 -QSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp -EEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred -eeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 0111111 566666 44 56666666677444432111 12345778899999999877765443
No 301
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.43 E-value=12 Score=33.80 Aligned_cols=163 Identities=7% Similarity=-0.049 Sum_probs=90.8
Q ss_pred EEeCCEEEEEEec-----CCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecC-------ceeeEEEc
Q 015220 240 KISPGIMLLIFTK-----ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQEN-------ENLQILDV 307 (411)
Q Consensus 240 kISdG~~Lai~q~-----t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~-------~~LkI~dL 307 (411)
.+.++.++++.-. .....-+-++|+.+++-..- -.++...--......++++++--+. +.+-+||+
T Consensus 95 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 95 GEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES--DPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC--CCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred EEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC--CCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence 3347777776653 23345577888888863322 1233333334566788888877653 57899999
Q ss_pred ccceEEEeeccccCCCceEEEEeeceeEEEE-ec-----CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEE
Q 015220 308 RNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 308 ~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd-----~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
.+.+-.+++..-..-..+-.++...++|+.+ .+ +.+.+||+.-+--+.+.. .-.+-+.- ....-++.+.+
T Consensus 173 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~--~p~~r~~~--~~~~~~~~l~v 248 (315)
T 4asc_A 173 KKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA--FPQERSSL--SLVSLVGTLYA 248 (315)
T ss_dssp TTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC--CSSCCBSC--EEEEETTEEEE
T ss_pred CCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCC--CCCcccce--eEEEECCEEEE
Confidence 9998888654221111222334466888888 43 368888888543333332 11222222 22233667777
Q ss_pred EEecCCCC--Ccc--ccCCceEEEeeeccee
Q 015220 382 SYCKADSD--DPL--AEGNGKLFVSLLMFVT 408 (411)
Q Consensus 382 S~~~d~~~--~~~--~~~~gtI~i~~i~tGk 408 (411)
-|..+... +.. ......+-++|+.|.+
T Consensus 249 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 249 IGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred ECCccccCcCCccccccccCcEEEecCCCCh
Confidence 76654310 000 0122567888888765
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=88.33 E-value=20 Score=35.07 Aligned_cols=80 Identities=21% Similarity=0.412 Sum_probs=35.6
Q ss_pred CcceeecccCCCCeEEee-CCCCeEEEeecCCC--eEEEEEeeCceEEEEeccC--ceeEEEE---eCC-EEEEEEecCC
Q 015220 184 FALFESESLKWPGFVEFD-DVNGKVLTYSAQDS--IYKVFDLKNYTMLYSISDK--NVQEIKI---SPG-IMLLIFTKAS 254 (411)
Q Consensus 184 ~~LF~~~~l~~PgfvEFD-d~NGkiLt~~~~ds--~ykVWdL~~Ys~iysLs~~--~VqeIkI---SdG-~~Lai~q~t~ 254 (411)
..+|.+..++.||.-.|+ +.+|+|.++..++. ..+.+.+.++++ ... +-.-|.+ .|| ..|.+-++..
T Consensus 61 G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~----~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~ 136 (355)
T 3sre_A 61 GLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTL----DISSFNPHGISTFIDDDNTVYLLVVNHPG 136 (355)
T ss_dssp SEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSC----CGGGCCEEEEEEEECTTCCEEEEEEECST
T ss_pred CeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCC----CcCceeeeeeEEEECCCCcEEEEEEECCC
Confidence 457777778999998887 45777777776632 233333332110 001 3333333 234 3455555555
Q ss_pred CceeeEEEEecCC
Q 015220 255 GHVPLKILSIEDG 267 (411)
Q Consensus 255 ~~ipiKIl~I~tG 267 (411)
....+-||.+..+
T Consensus 137 ~~s~ielf~~d~~ 149 (355)
T 3sre_A 137 SSSTVEVFKFQEE 149 (355)
T ss_dssp TCCEEEEEEEETT
T ss_pred CCCeEEEEEEECC
Confidence 5566667666643
No 303
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=88.31 E-value=2 Score=45.60 Aligned_cols=126 Identities=16% Similarity=0.140 Sum_probs=84.7
Q ss_pred hhhCCCCCCCcceee-cccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeC----------ceEEEEeccC-ce------
Q 015220 175 IRRGKPDAGFALFES-ESLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN----------YTMLYSISDK-NV------ 236 (411)
Q Consensus 175 i~~gk~~~~~~LF~~-~~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~----------Ys~iysLs~~-~V------ 236 (411)
+..||++........ +.=..|--+.||. +|.+-+..--++.+-+||+.+ .+.+.+|.-+ +.
T Consensus 312 ~~~~~l~~~~~v~~~v~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~ 390 (595)
T 1fwx_A 312 VFYENADPRSAVVAEPELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTV 390 (595)
T ss_dssp HHHSCCCGGGGEEECCBCCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEET
T ss_pred ccccccCcccceEEEcCCCCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceec
Confidence 457888766555444 3335699999997 678888888999999999998 5667777643 32
Q ss_pred eEEEEe-CCEEEEEEecCC-Cce----ee-----EEEEecCCc--EEeEeeeccccCCcceeeeeecceeEEeecCceee
Q 015220 237 QEIKIS-PGIMLLIFTKAS-GHV----PL-----KILSIEDGT--VLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQ 303 (411)
Q Consensus 237 qeIkIS-dG~~Lai~q~t~-~~i----pi-----KIl~I~tG~--~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~Lk 303 (411)
+.++++ ||.+|.+...-+ ++. |+ -|++|++|+ +++..- - ..-|=+|+-+..+++. ++.+
T Consensus 391 ~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p--~-~~ePh~~~i~~~~~~~-----~~~~ 462 (595)
T 1fwx_A 391 MGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP--T-FAEPHDAIAVHPSILS-----DIKS 462 (595)
T ss_dssp TTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE--E-SSCCCCEEEECTTTTT-----TCCS
T ss_pred cceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc--C-CCCCCceEEccHHHcc-----CCce
Confidence 334556 999999998877 665 66 899997777 222211 1 1233344444445443 5689
Q ss_pred EEEccc
Q 015220 304 ILDVRN 309 (411)
Q Consensus 304 I~dL~t 309 (411)
|||+..
T Consensus 463 ~~~~~~ 468 (595)
T 1fwx_A 463 VWDRND 468 (595)
T ss_dssp SCCTTC
T ss_pred eccCCC
Confidence 998754
No 304
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.58 E-value=1.4 Score=48.81 Aligned_cols=32 Identities=19% Similarity=0.134 Sum_probs=29.1
Q ss_pred ceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 369 NNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 369 n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
..++.++|+.++++=|-|. +++|||+.||+|+
T Consensus 241 vs~~~~~~~~~lftL~~D~----------~LRiWsl~t~~~v 272 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDY----------KLKVLDLSTNQCV 272 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTC----------EEEEEETTTTEEE
T ss_pred EEeeccCCccEEEEEeCCC----------EEEEEECCCCCeE
Confidence 5567789999999999998 9999999999996
No 305
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.47 E-value=2.7 Score=46.07 Aligned_cols=33 Identities=18% Similarity=0.124 Sum_probs=29.7
Q ss_pred cceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 368 TNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 368 ~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+.+++.++|+.++++=|-|. +++|||+.||+|+
T Consensus 238 ~~~~~~~~~~~~lftl~~D~----------~LRiWsl~t~~~v 270 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDY----------KLKVLDLSTNQCV 270 (950)
T ss_dssp EEEEEEETTTTEEEEEETTC----------EEEEEETTTTEEE
T ss_pred EEEEeecCCCcEEEEEECCC----------EEEEEECCCCCeE
Confidence 45677788999999999998 9999999999996
No 306
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=84.88 E-value=13 Score=38.57 Aligned_cols=135 Identities=12% Similarity=0.245 Sum_probs=80.7
Q ss_pred CCCcceeecccC--CCCeEEeeCCCCeEEEeecCCCeEEEEEee---CceEEEE---eccCceeEEEEe-CCEEEEEEec
Q 015220 182 AGFALFESESLK--WPGFVEFDDVNGKVLTYSAQDSIYKVFDLK---NYTMLYS---ISDKNVQEIKIS-PGIMLLIFTK 252 (411)
Q Consensus 182 ~~~~LF~~~~l~--~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~---~Ys~iys---Ls~~~VqeIkIS-dG~~Lai~q~ 252 (411)
..-|.|+...+. .+-|.==+.-+.++++ ++++.+|.=++. +|+.|-. +..++|..+.+| +|-+||+...
T Consensus 8 ~~~pif~~~~~~~~s~R~~~~~~n~t~i~~--a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~ 85 (452)
T 3pbp_A 8 SALPIFQASLSASQSPRYIFSSQNGTRIVF--IQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND 85 (452)
T ss_dssp CCCTTTCC------CCEEEEEETTTTEEEE--EETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS
T ss_pred eeeeecccccccCCCCcEEEEEcCCCEEEE--EECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC
Confidence 345788865554 5666644555666666 667889987776 4665533 445588889999 9999999832
Q ss_pred CCCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeecCceeeEEEccc------ceEEEeeccccCCCceE
Q 015220 253 ASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRN------FELTEVSRTEFMTPSAF 326 (411)
Q Consensus 253 t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t------~e~~~v~~T~f~hpsAf 326 (411)
--+.|..|..|..... + +.+ +..-+.+-|++.. ..+.+ -+| ||-+.
T Consensus 86 ----~~V~Vv~LP~~~~~~~---------~--------~~~---~~~~q~~ty~l~~~~~~~~s~I~q---VlW-HPl~~ 137 (452)
T 3pbp_A 86 ----NEIFVMEVPWGYSNVE---------D--------VSI---QDAFQIFHYSIDEEEVGPKSSIKK---VLF-HPKSY 137 (452)
T ss_dssp ----SEEEEEECCTTCSCCC---------C--------HHH---HHTTEEEEEEGGGCC--CCCCEEE---EEE-CTTBG
T ss_pred ----CeEEEEEecCccccCc---------c--------ccc---ccccceeEEEcCCcccCCCCceeE---EEe-ccccC
Confidence 2566777775532221 0 000 0111234555543 22333 566 88765
Q ss_pred EEEeeceeEEEEecCeEEEEecC
Q 015220 327 IFLYENQLFLTFRNRTVAVWNFR 349 (411)
Q Consensus 327 ifLy~sqlFlSfsd~tI~iWn~~ 349 (411)
. .+.|.+--+|++|++||+.
T Consensus 138 ~---ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 138 R---DSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp G---GCEEEEEETTSCEEEEETT
T ss_pred C---CCeEEEEecCCEEEEEEcc
Confidence 3 4455555599999999998
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=82.03 E-value=28 Score=31.24 Aligned_cols=194 Identities=6% Similarity=-0.081 Sum_probs=103.6
Q ss_pred CCeEEEeecC----CCeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecC------CCceeeEEEEecCCcEE
Q 015220 204 NGKVLTYSAQ----DSIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKA------SGHVPLKILSIEDGTVL 270 (411)
Q Consensus 204 NGkiLt~~~~----ds~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t------~~~ipiKIl~I~tG~~L 270 (411)
++++++.++. -+.+.+||..+.+ .+-.+... .-..+.+.++.++++.-.. ....-+-++|+.+.+-.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~ 103 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWS 103 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEe
Confidence 4455555542 2345666666544 22222222 1223334477776665431 12234677888887643
Q ss_pred eEeeeccccCCcceeeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e----
Q 015220 271 KSFNHLLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R---- 339 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s---- 339 (411)
.-. .++....-..+...++++++--+ -..+-+||+.+++-.+++.........-.++..+++|+.+ .
T Consensus 104 ~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~ 181 (308)
T 1zgk_A 104 PCA--PMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN 181 (308)
T ss_dssp ECC--CCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC
T ss_pred ECC--CCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCC
Confidence 321 12222233445667888877633 3578899999998888643221111112233456888877 3
Q ss_pred -cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 -NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 -d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+.++|+..+--+.+.. +. .+-+.-..+.+ ++.+++-|..+.. .....+-++|+.|++
T Consensus 182 ~~~~~~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~--~~~iyv~GG~~~~-----~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 182 RLNSAECYYPERNEWRMITA-MN-TIRSGAGVCVL--HNCIYAAGGYDGQ-----DQLNSVERYDVETET 242 (308)
T ss_dssp BCCCEEEEETTTTEEEECCC-CS-SCCBSCEEEEE--TTEEEEECCBCSS-----SBCCCEEEEETTTTE
T ss_pred cCceEEEEeCCCCeEeeCCC-CC-CccccceEEEE--CCEEEEEeCCCCC-----CccceEEEEeCCCCc
Confidence 3578899988553333321 11 12222222333 7778777765531 123578888888765
No 308
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=81.32 E-value=30 Score=31.10 Aligned_cols=184 Identities=14% Similarity=0.089 Sum_probs=97.4
Q ss_pred CCCeEEeeCCCCeEEEeecCCCe--EEEEEeeCceE--EEEeccC-ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCc
Q 015220 194 WPGFVEFDDVNGKVLTYSAQDSI--YKVFDLKNYTM--LYSISDK-NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGT 268 (411)
Q Consensus 194 ~PgfvEFDd~NGkiLt~~~~ds~--ykVWdL~~Ys~--iysLs~~-~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~ 268 (411)
+|.-+-|| ++|++++.....+. +-.+|..+.+. +..+.+. .-..+.+.++-++.+.+..+.. |-.++..+|+
T Consensus 73 ~p~gia~~-~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~--i~~~d~~~~~ 149 (306)
T 2p4o_A 73 KVSGLAFT-SNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGA--IWLIDVVQPS 149 (306)
T ss_dssp EEEEEEEC-TTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTE--EEEEETTTTE
T ss_pred CceeEEEc-CCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCe--EEEEeCCCCc
Confidence 46677776 45777776644333 33345555443 3333322 1223334544455555544442 3345555442
Q ss_pred --EEeEeee-----ccccCCcceeeeeecceeEEee-cCceeeEEEccc-ceE--EEeeccccCCCceEEEEeeceeEEE
Q 015220 269 --VLKSFNH-----LLHRNKKVDFIEQFNEKLLVKQ-ENENLQILDVRN-FEL--TEVSRTEFMTPSAFIFLYENQLFLT 337 (411)
Q Consensus 269 --~L~t~~~-----LL~h~K~I~FLE~~~ekllIKQ-e~~~LkI~dL~t-~e~--~~v~~T~f~hpsAfifLy~sqlFlS 337 (411)
+...... ..+.-...+-|-..+..+++.. .++.|..+|+.. ++. .++- ..+..|..+.+=..-++|++
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~-~~~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTCCEEEE
T ss_pred EeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEE-eccCCCCCeEECCCCCEEEE
Confidence 2211000 0111112233422233576665 567899999875 332 1111 11356777655545578888
Q ss_pred E-ecCeEEEEecCCceee--eeccccccCCCCccceEEEc---CCCCEEEEEecC
Q 015220 338 F-RNRTVAVWNFRGELVT--SFEDHLLWHPDCNTNNIYIT---SDQDLIISYCKA 386 (411)
Q Consensus 338 f-sd~tI~iWn~~Gel~~--s~e~H~~~~~~c~~n~i~Is---~Dqd~iiS~~~d 386 (411)
- .++.|.+++..|++.+ ....... ....++++ +|++.|+-.+..
T Consensus 229 ~~~~~~V~~~~~~G~~~~~~~~~~~~~-----~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 229 THIYNSVVRIAPDRSTTIIAQAEQGVI-----GSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CBTTCCEEEECTTCCEEEEECGGGTCT-----TEEEEEECCSTTTTTEEEEEECT
T ss_pred eCCCCeEEEECCCCCEEEEeecccccC-----CceEEEEecccCCCCEEEEECCC
Confidence 7 5789999999998744 3433222 56788998 897766665554
No 309
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.83 E-value=17 Score=39.78 Aligned_cols=40 Identities=13% Similarity=0.325 Sum_probs=28.7
Q ss_pred cccCCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeeec
Q 015220 318 TEFMTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSFE 357 (411)
Q Consensus 318 T~f~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~e 357 (411)
+....|.+.+.++.. ..++|+ .|+++|+||+. |.++.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 230 ADYRSPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp SSCCCTTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCCCCcceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 444456666666554 345677 99999999999 99888643
No 310
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=80.81 E-value=33 Score=31.24 Aligned_cols=141 Identities=6% Similarity=-0.018 Sum_probs=78.4
Q ss_pred eeeEEEEecCCcEEeEeeeccccCCcc-eeeeeecceeEEeec-------CceeeEEEc--ccceEEEeeccccCCC--c
Q 015220 257 VPLKILSIEDGTVLKSFNHLLHRNKKV-DFIEQFNEKLLVKQE-------NENLQILDV--RNFELTEVSRTEFMTP--S 324 (411)
Q Consensus 257 ipiKIl~I~tG~~L~t~~~LL~h~K~I-~FLE~~~ekllIKQe-------~~~LkI~dL--~t~e~~~v~~T~f~hp--s 324 (411)
--+-++|+.+.+=..-- -++....- ..+...+++++|--+ ...+.+||+ .+.+-.+++......+ .
T Consensus 168 ~~v~~yd~~~~~W~~~~--~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAG--ESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEE--ECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECC--CCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 45777888877644321 22222222 456777888887643 456788988 7777777654421111 1
Q ss_pred eEEEEeeceeEEEE-ec----------------------CeEEEEecCCc---eeeeeccccccCCCCccceEEEcCCCC
Q 015220 325 AFIFLYENQLFLTF-RN----------------------RTVAVWNFRGE---LVTSFEDHLLWHPDCNTNNIYITSDQD 378 (411)
Q Consensus 325 AfifLy~sqlFlSf-sd----------------------~tI~iWn~~Ge---l~~s~e~H~~~~~~c~~n~i~Is~Dqd 378 (411)
+-.++...++|+.+ .+ ..+.+||+..+ .+..+... -+. ..++.-++.
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-----r~~--~~~~~~~~~ 318 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-----RAY--GVSLPWNNS 318 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-----CBS--SEEEEETTE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-----ccc--ceeEEeCCE
Confidence 22455566888887 32 36889998844 22233222 222 333445788
Q ss_pred EEEEEecCCCCCccccCCceEEEeeecceeee
Q 015220 379 LIISYCKADSDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 379 ~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
++|-|..+... .....+-+.++.++|.+
T Consensus 319 i~v~GG~~~~~----~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 319 LLIIGGETAGG----KAVTDSVLITVKDNKVT 346 (357)
T ss_dssp EEEEEEECGGG----CEEEEEEEEEC-CCSCE
T ss_pred EEEEeeeCCCC----CEeeeEEEEEEcCcEeE
Confidence 88888866411 11246666699998864
No 311
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=80.48 E-value=52 Score=37.05 Aligned_cols=132 Identities=15% Similarity=0.189 Sum_probs=82.0
Q ss_pred EEEEEeeCceEEEEeccCceeEEEEe----CCEEEEEEecCCCce------eeEEEEecCCcEEeEeeeccccCCcceee
Q 015220 217 YKVFDLKNYTMLYSISDKNVQEIKIS----PGIMLLIFTKASGHV------PLKILSIEDGTVLKSFNHLLHRNKKVDFI 286 (411)
Q Consensus 217 ykVWdL~~Ys~iysLs~~~VqeIkIS----dG~~Lai~q~t~~~i------piKIl~I~tG~~L~t~~~LL~h~K~I~FL 286 (411)
|=|-.+.+.+.++++++++|.|+..+ +..=|+..+-.++.+ -|.+++...++.+.+.. -+..++|-.-
T Consensus 442 yLvlS~~~~T~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~--~p~~~~I~~A 519 (1158)
T 3ei3_A 442 TLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWK--EPQAKNISVA 519 (1158)
T ss_dssp EEEEEETTEEEEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEEC--CTTCCCCCEE
T ss_pred EEEEECCCCeEEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEE--CCCCCEEEEE
Confidence 44444445578888888888888655 444455554332211 24555555555554422 2334566655
Q ss_pred eeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec---------eeEEEE--ecCeEEEEecC-Ccee
Q 015220 287 EQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN---------QLFLTF--RNRTVAVWNFR-GELV 353 (411)
Q Consensus 287 E~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s---------qlFlSf--sd~tI~iWn~~-Gel~ 353 (411)
...+..++++. +..|..+.+..+++.++.+..+ +..+.|++.. ..++.+ .|++++|.++. .+.+
T Consensus 520 s~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l--~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~ 595 (1158)
T 3ei3_A 520 SCNSSQVVVAV-GRALYYLQIHPQELRQISHTEM--EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL 595 (1158)
T ss_dssp EECSSEEEEEE-TTEEEEEEEETTEEEEEEEEEC--SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE
T ss_pred EeCCCEEEEEE-CCEEEEEEeeCCceeeecccCC--CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE
Confidence 55566667775 6677788888888777655443 6678998864 345555 38899999998 4444
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=78.19 E-value=36 Score=30.17 Aligned_cols=193 Identities=8% Similarity=-0.045 Sum_probs=102.8
Q ss_pred CeEEEeecCC----CeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecCC--CceeeEEEEecCCcEEeEeee
Q 015220 205 GKVLTYSAQD----SIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKAS--GHVPLKILSIEDGTVLKSFNH 275 (411)
Q Consensus 205 GkiLt~~~~d----s~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t~--~~ipiKIl~I~tG~~L~t~~~ 275 (411)
+++++.++.+ +...+||+.+.+ .+-.+... .-..+..-++.++++.-... ...-+-++|+.+++-..-.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-- 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA-- 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC--
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCC--
Confidence 4555555532 345566666544 22222222 11223333777777754332 2334677888887644321
Q ss_pred ccccCCcceeeeeecceeEEeec------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e-------cC
Q 015220 276 LLHRNKKVDFIEQFNEKLLVKQE------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R-------NR 341 (411)
Q Consensus 276 LL~h~K~I~FLE~~~ekllIKQe------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s-------d~ 341 (411)
.++...--..+...++++++--+ -+.+-+||+.+++-.+++.........-.+++..++|+.+ . .+
T Consensus 94 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 94 NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 22332333456667888877543 1467899999999888654332111122234456888876 3 34
Q ss_pred eEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 342 tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+||+.-+--+.+.. +. .+-+. .....-++.+++-|..+.. ....++-++|+.|++
T Consensus 174 ~~~~yd~~~~~W~~~~~-~p-~~r~~--~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAE-MS-TRRSG--AGVGVLNNLLYAVGGHDGP-----LVRKSVEVYDPTTNA 231 (302)
T ss_dssp CEEEEETTTTEEEEECC-CS-SCCBS--CEEEEETTEEEEECCBSSS-----SBCCCEEEEETTTTE
T ss_pred EEEEEeCCCCcEEECCC-Cc-ccccc--ccEEEECCEEEEECCCCCC-----cccceEEEEeCCCCC
Confidence 68888888543333321 11 12222 2222336788887765531 123578888888765
No 313
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=77.32 E-value=61 Score=32.29 Aligned_cols=100 Identities=7% Similarity=0.044 Sum_probs=67.2
Q ss_pred ceeEEEEe-CCEEEEEEecCCC----------cee--eEEEEecCC--cEEeEeeec---cccCCcceeeeee-------
Q 015220 235 NVQEIKIS-PGIMLLIFTKASG----------HVP--LKILSIEDG--TVLKSFNHL---LHRNKKVDFIEQF------- 289 (411)
Q Consensus 235 ~VqeIkIS-dG~~Lai~q~t~~----------~ip--iKIl~I~tG--~~L~t~~~L---L~h~K~I~FLE~~------- 289 (411)
.|+.+.+- .|.+-++..+.-+ .-| |-+|||.|+ ++++++.+. +....-++-|.+-
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 68888887 7887777766432 112 567999999 999987632 2233445555555
Q ss_pred --cceeEEee-cCceeeEEEcccceEEEeeccccCCCc-eEEEEeeceeE
Q 015220 290 --NEKLLVKQ-ENENLQILDVRNFELTEVSRTEFMTPS-AFIFLYENQLF 335 (411)
Q Consensus 290 --~ekllIKQ-e~~~LkI~dL~t~e~~~v~~T~f~hps-AfifLy~sqlF 335 (411)
....+|.- ++.-|-+||+.+++.++|... +++|+ ++.|....+-|
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~-~~~pd~~~~~~i~G~~~ 216 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHP-TFKAERPTKFDYGGKEY 216 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECG-GGSCCSCEEEEETTEEE
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccC-CCccccCcceEECCEEe
Confidence 23457766 567899999999999998864 44776 55554444433
No 314
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=76.92 E-value=18 Score=42.68 Aligned_cols=154 Identities=14% Similarity=0.193 Sum_probs=101.8
Q ss_pred eeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEe-----eeccccCCcceeeeeecceeEEeecCceeeEEEcccc
Q 015220 236 VQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF-----NHLLHRNKKVDFIEQFNEKLLVKQENENLQILDVRNF 310 (411)
Q Consensus 236 VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~-----~~LL~h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~ 310 (411)
+..+++....++-+.+.......+-|.|+.++.-...- .-+.|++++|=.+ + .+..|||.||.++
T Consensus 27 f~~~T~eSDkyicvre~~~~~~~vvIidl~~~~~~~rrpi~AdsAIMnP~~~iiAL---------r-ag~~lQiFnl~~k 96 (1630)
T 1xi4_A 27 FSTLTMESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIAL---------K-AGKTLQIFNIEMK 96 (1630)
T ss_pred ccceeeecCceEEEEecCCCCceEEEEECCCCCCcccccccchhhccCCCcceEEE---------e-cCCeEEEeehHHh
Confidence 34456666677778877777778999999986644210 0234555543322 2 4899999999999
Q ss_pred eEEEeeccccCCCceEEEEe-ec-eeEEEEecCeEEEEecCC--ceeeeeccccccCCCCccceEEEcCCCCEEEEEecC
Q 015220 311 ELTEVSRTEFMTPSAFIFLY-EN-QLFLTFRNRTVAVWNFRG--ELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKA 386 (411)
Q Consensus 311 e~~~v~~T~f~hpsAfifLy-~s-qlFlSfsd~tI~iWn~~G--el~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d 386 (411)
+..+ +-.| |+-++|-- ++ +.+.-..++.|--|+..| +|+.=|+.|.... +|-+=+--.++|++.++-..=.
T Consensus 97 ~klk---s~~~-~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~-~~QIinY~~d~~~kW~~l~gi~ 171 (1630)
T 1xi4_A 97 SKMK---AHTM-TDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGIS 171 (1630)
T ss_pred hhhc---cccc-CCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcc-cCeeEEeeeCCCCCeEEEEeec
Confidence 9887 4443 55666632 44 444444899999999986 5999999998876 6888788888888866533222
Q ss_pred CCCCccccCCceEEEeeecce
Q 015220 387 DSDDPLAEGNGKLFVSLLMFV 407 (411)
Q Consensus 387 ~~~~~~~~~~gtI~i~~i~tG 407 (411)
. .++ .-.|.|-++..+-+
T Consensus 172 ~-~~~--~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 172 A-QQN--RVVGAMQLYSVDRK 189 (1630)
T ss_pred c-CCC--cccceeeeeecccc
Confidence 1 111 12288887776543
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=73.86 E-value=24 Score=34.46 Aligned_cols=83 Identities=16% Similarity=0.291 Sum_probs=58.1
Q ss_pred cCceeeEEEcc--cceEEEeecccc------CCCceEEEEee--c--eeEEEE-e--cCeEEEEecC--Cc---eeeeec
Q 015220 298 ENENLQILDVR--NFELTEVSRTEF------MTPSAFIFLYE--N--QLFLTF-R--NRTVAVWNFR--GE---LVTSFE 357 (411)
Q Consensus 298 e~~~LkI~dL~--t~e~~~v~~T~f------~hpsAfifLy~--s--qlFlSf-s--d~tI~iWn~~--Ge---l~~s~e 357 (411)
....|-++|+. +++..++..|.+ ++|-.+.+... . .||+.= . +.+|++|.++ |. ++++++
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 45678899998 456667666653 47777766552 1 466665 3 6799999988 23 566777
Q ss_pred cccccCCCCccceEEEcCCCCEEEEEe
Q 015220 358 DHLLWHPDCNTNNIYITSDQDLIISYC 384 (411)
Q Consensus 358 ~H~~~~~~c~~n~i~Is~Dqd~iiS~~ 384 (411)
+... -..|.+.+.+||.+.++..
T Consensus 161 g~~~----~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 161 HKLL----PSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp CTTC----SSEEEEEEEETTEEEEEES
T ss_pred cCCC----CCCceEEEeCCCCEEecCC
Confidence 7544 4679999999999988754
No 316
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=70.25 E-value=92 Score=33.98 Aligned_cols=79 Identities=10% Similarity=0.052 Sum_probs=49.8
Q ss_pred CCceEEEEeeceeEEEEecCeEEEEecC--Cceee-eeccc-------cccC--CCCcc-ceEEE-cCCCCEEEEEecCC
Q 015220 322 TPSAFIFLYENQLFLTFRNRTVAVWNFR--GELVT-SFEDH-------LLWH--PDCNT-NNIYI-TSDQDLIISYCKAD 387 (411)
Q Consensus 322 hpsAfifLy~sqlFlSfsd~tI~iWn~~--Gel~~-s~e~H-------~~~~--~~c~~-n~i~I-s~Dqd~iiS~~~d~ 387 (411)
+|-..+++-..+++++..||.+---+.+ ++.-- .|++. .+|. +.-.- +.|.. +.|+-+++.=|-|.
T Consensus 162 ~Ph~L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~Dh 241 (729)
T 3f7f_A 162 VPHFLFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNC 241 (729)
T ss_dssp CEEEEEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEETTTEEEEEETTC
T ss_pred CCcEEEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEeccCCcEEEEEEcCC
Confidence 4555555556688888888866444433 34222 34442 1121 11111 33443 77889999999999
Q ss_pred CCCccccCCceEEEeeecceeee
Q 015220 388 SDDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 388 ~~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+++|||+.||+|+
T Consensus 242 ----------~LRiWsL~t~~lv 254 (729)
T 3f7f_A 242 ----------HLKIWDLTSFTLI 254 (729)
T ss_dssp ----------EEEEEETTTTEEE
T ss_pred ----------eEEEEEcCCCceE
Confidence 9999999999986
No 317
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=68.72 E-value=80 Score=29.85 Aligned_cols=135 Identities=12% Similarity=0.179 Sum_probs=68.8
Q ss_pred EEEeeccceehhhhccccceeeecc-------cccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeee
Q 015220 99 IEIVAARDIVFALAQSGVCAAFCRE-------TNQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTR 171 (411)
Q Consensus 99 ~EIv~a~dii~~L~~sG~c~af~~~-------t~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~ 171 (411)
.|.+.-+++++.+++.|.....+.. .++-+.-+|-..++.+..+|.-..++.++++| +.=+++.++
T Consensus 2 edli~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T-------~~G~~~~~~ 74 (312)
T 1suu_A 2 SDLMQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMIS-------NEGKLYLIN 74 (312)
T ss_dssp ------CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEE-------TTSEEEEEE
T ss_pred ccccCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEE-------CCCeEEEEE
Confidence 3566778999999999998655322 23345566754444445666666778888876 445677777
Q ss_pred hhhhhhCC-CCCCCcceeecccCCC----CeE---EeeCCCCeEEEeecCCCeEEEEEeeCceEE-------EEec-cCc
Q 015220 172 IEYIRRGK-PDAGFALFESESLKWP----GFV---EFDDVNGKVLTYSAQDSIYKVFDLKNYTML-------YSIS-DKN 235 (411)
Q Consensus 172 ~~~i~~gk-~~~~~~LF~~~~l~~P----gfv---EFDd~NGkiLt~~~~ds~ykVWdL~~Ys~i-------ysLs-~~~ 235 (411)
..+|..+. -..|.|+-..-.|.-- +.+ +|+ .+..+|. ...++-.|--.+..|... ..|. +++
T Consensus 75 ~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~-~~~~ll~-~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~ 152 (312)
T 1suu_A 75 AYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLT-DDAYLLL-TTASGKIARFESTDFKAVKSRGVIVIKLNDKDF 152 (312)
T ss_dssp GGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCC-TTCEEEE-EETTSEEEEEEGGGGCC----CEECBCCCTTCC
T ss_pred HHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCC-CCCEEEE-EeCCCeEEEEEHHHhhccCCCcEEEEecCCCCE
Confidence 77775432 2334443222112100 111 222 2344444 356666777778776432 2343 335
Q ss_pred eeEEEEe
Q 015220 236 VQEIKIS 242 (411)
Q Consensus 236 VqeIkIS 242 (411)
+..+.+.
T Consensus 153 lv~~~~~ 159 (312)
T 1suu_A 153 VTSAEIV 159 (312)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 5555554
No 318
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=68.22 E-value=68 Score=28.80 Aligned_cols=164 Identities=5% Similarity=-0.064 Sum_probs=88.6
Q ss_pred EEEeCCEEEEEEecC----CCceeeEEEEecCCcEEeEeeeccccCCcceeeeeecceeEEeec-------CceeeEEEc
Q 015220 239 IKISPGIMLLIFTKA----SGHVPLKILSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQE-------NENLQILDV 307 (411)
Q Consensus 239 IkISdG~~Lai~q~t----~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQe-------~~~LkI~dL 307 (411)
+.+-++.++++.-.. ....-+-++|+.+.+-..-. .++....-..+...++++++--+ .+.+-+||+
T Consensus 105 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 LGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEET
T ss_pred eEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcC
Confidence 333477777776543 22334667777777644321 12222223345567888877543 246899999
Q ss_pred ccceEEEeeccccCCCceEEEEeeceeEEEE-ec-----CeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEE
Q 015220 308 RNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN-----RTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLII 381 (411)
Q Consensus 308 ~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd-----~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~ii 381 (411)
.+++-.+++..-......-.++...++|+.+ .+ +.+.+||+...--+.+.. . |..-....+..-++.+++
T Consensus 183 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~---p~~r~~~~~~~~~~~i~v 258 (318)
T 2woz_A 183 KKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE-F---PQERSSISLVSLAGSLYA 258 (318)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC-C---SSCCBSCEEEEETTEEEE
T ss_pred CCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC-C---CCcccceEEEEECCEEEE
Confidence 9999888754321111112234456888887 32 467888888443333321 1 111122223344677877
Q ss_pred EEecCCCCCcc----ccCCceEEEeeeccee
Q 015220 382 SYCKADSDDPL----AEGNGKLFVSLLMFVT 408 (411)
Q Consensus 382 S~~~d~~~~~~----~~~~gtI~i~~i~tGk 408 (411)
-|..+...... ......+-++|+.|.+
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 77665421111 1123678888888764
No 319
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.65 E-value=11 Score=40.98 Aligned_cols=62 Identities=23% Similarity=0.335 Sum_probs=41.0
Q ss_pred eecc-eeEEeecCceeeEEEcccceEEEeec---cc---------cCCCceEEEEeecee---EEEEecCeEEEEecCC
Q 015220 288 QFNE-KLLVKQENENLQILDVRNFELTEVSR---TE---------FMTPSAFIFLYENQL---FLTFRNRTVAVWNFRG 350 (411)
Q Consensus 288 ~~~e-kllIKQe~~~LkI~dL~t~e~~~v~~---T~---------f~hpsAfifLy~sql---FlSfsd~tI~iWn~~G 350 (411)
.+.+ .++.=..+|+|||||+.++++..... +. ...|..++-++. .+ |+.+.+|.+.+|.+.+
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~-~~lv~y~P~~~G~Fk~~~l~~ 305 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYN-NTLVTLLPLENGLFQMGTLLV 305 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESS-SEEEEEETTTTCEEEEEEEEC
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhee-eEEEEEecCCCCeEEEEEEEE
Confidence 3434 55777899999999999999776211 10 114455555554 33 4444788999999874
No 320
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=66.42 E-value=86 Score=29.37 Aligned_cols=146 Identities=8% Similarity=0.088 Sum_probs=88.0
Q ss_pred CCCCeEEeeCCCCeEEEeecCCCeEEEEEee-CceEEEEeccCceeEEEEeCCEEEEEEecCC----------CceeeEE
Q 015220 193 KWPGFVEFDDVNGKVLTYSAQDSIYKVFDLK-NYTMLYSISDKNVQEIKISPGIMLLIFTKAS----------GHVPLKI 261 (411)
Q Consensus 193 ~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~-~Ys~iysLs~~~VqeIkISdG~~Lai~q~t~----------~~ipiKI 261 (411)
..=||+-+ .++.|-.+...|. -+++-|+ +.+....|+++.+.-+-+.++.+.-+..... ++..|..
T Consensus 16 ~n~g~~~~--~g~~iy~~n~~d~-~~ly~~~~dg~~~~~l~~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 16 YNAGLFCE--SDGEVFFSNTNDN-GRLYAMNIDGSNIHKLSNDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp GGTTCEEE--ETTEEEEEEGGGT-TEEEEEETTSCSCEEEEEEEEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred ecceEEEE--eCCEEEEEeCCCC-ceEEEEcCCCCCCEEccCCceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 33455544 3455555444322 2455554 3556777787778877777777666655432 3567888
Q ss_pred EEecCCcEEeEeeeccccCCcceeeeeecceeEEee----cCceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEE
Q 015220 262 LSIEDGTVLKSFNHLLHRNKKVDFIEQFNEKLLVKQ----ENENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLT 337 (411)
Q Consensus 262 l~I~tG~~L~t~~~LL~h~K~I~FLE~~~ekllIKQ----e~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlS 337 (411)
+++..++... |.. .+-..+.+-+++|+... ++..|...|+..++..+|..+.- .+| ......||.|
T Consensus 93 i~~dg~~~~~-----l~~-~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~---~~~-~~~g~~iy~t 162 (302)
T 3s25_A 93 IKRNGHGSTV-----LDP-DPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL---FTC-NTSDRYFYYN 162 (302)
T ss_dssp EETTSCCCEE-----EEC-SCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC---CCS-EEETTEEEEE
T ss_pred EeCCCCcceE-----eec-CCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc---eEe-eEECCEEEEE
Confidence 8888776322 222 22335677888887654 67788888888777777655432 333 3445577776
Q ss_pred Ee-cCeEEEEecCCc
Q 015220 338 FR-NRTVAVWNFRGE 351 (411)
Q Consensus 338 fs-d~tI~iWn~~Ge 351 (411)
-. ..+|.+=++.|.
T Consensus 163 ~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 163 NPKNGQLYRYDTASQ 177 (302)
T ss_dssp CTTTCCEEEEETTTT
T ss_pred eCCCceEEEEECCCC
Confidence 53 567777777754
No 321
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=65.74 E-value=73 Score=28.26 Aligned_cols=193 Identities=7% Similarity=-0.009 Sum_probs=104.0
Q ss_pred CeEEEeecC--CCeEEEEEeeCce--EEEEeccC-ceeEEEEeCCEEEEEEecC-CCceeeEEEEecCCcEEeEeeeccc
Q 015220 205 GKVLTYSAQ--DSIYKVFDLKNYT--MLYSISDK-NVQEIKISPGIMLLIFTKA-SGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 205 GkiLt~~~~--ds~ykVWdL~~Ys--~iysLs~~-~VqeIkISdG~~Lai~q~t-~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
+.+++.++. .+.+.+||..+.+ .+-.+... .-..+.+-++.++++.-.. .....+-++|+.+++-..-. .++
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~--~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL--GPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE--CCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC--CCC
Confidence 344554443 3455566666644 22222222 1122333467766665443 23345677888888654322 233
Q ss_pred cCCcceeeeeecceeEEeecC-------ceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e---------cC
Q 015220 279 RNKKVDFIEQFNEKLLVKQEN-------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R---------NR 341 (411)
Q Consensus 279 h~K~I~FLE~~~ekllIKQe~-------~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s---------d~ 341 (411)
...--..+...+++++|--+. ..+-+||+.+++-.+++..-......-.++...++|+.+ . .+
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 333334556678888775432 458899999998887644322111222234456888877 3 45
Q ss_pred eEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 342 TVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 342 tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+||+.-+--+.+.. +. .+-+.-..+.+ ++.+++-|..+.. ....++.++|+.|++
T Consensus 170 ~~~~yd~~~~~W~~~~~-~p-~~r~~~~~~~~--~~~i~v~GG~~~~-----~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 170 SCEVYDPATETWTELCP-MI-EARKNHGLVFV--KDKIFAVGGQNGL-----GGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEEEEETTTTEEEEECC-CS-SCCBSCEEEEE--TTEEEEECCEETT-----EEBCCEEEEETTTTE
T ss_pred eEEEeCCCCCeEEECCC-cc-chhhcceEEEE--CCEEEEEeCCCCC-----CCCceEEEeeCCCCc
Confidence 68899988554444432 11 22222222222 6777777765541 123578888888764
No 322
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=61.83 E-value=2.1e+02 Score=32.24 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=66.3
Q ss_pred CCeEEEEEeeCceEEE--Eecc-CceeEEEE---e--CCEEEEEEec-------CCCceeeEEEEecCCcEEeEeeeccc
Q 015220 214 DSIYKVFDLKNYTMLY--SISD-KNVQEIKI---S--PGIMLLIFTK-------ASGHVPLKILSIEDGTVLKSFNHLLH 278 (411)
Q Consensus 214 ds~ykVWdL~~Ys~iy--sLs~-~~VqeIkI---S--dG~~Lai~q~-------t~~~ipiKIl~I~tG~~L~t~~~LL~ 278 (411)
.+++++.|-.+++.+. ++.+ |.+..++. . +..+++++.. ...+-.|.|+.+.++++ +- .+--.
T Consensus 806 ~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL-~l-v~~~~ 883 (1158)
T 3ei3_A 806 VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL-QT-VAEKE 883 (1158)
T ss_dssp EEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE-EE-EEEEE
T ss_pred eEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE-EE-EEEEE
Confidence 5889999999999774 4443 35555554 3 2578888763 22567799999985532 21 11122
Q ss_pred cCCcceeeeeecceeEEeecCceeeEEEcccceE
Q 015220 279 RNKKVDFIEQFNEKLLVKQENENLQILDVRNFEL 312 (411)
Q Consensus 279 h~K~I~FLE~~~ekllIKQe~~~LkI~dL~t~e~ 312 (411)
-+-++..|..+++++++.+ |++|.+||+...+.
T Consensus 884 v~g~v~al~~~~g~Lla~i-g~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 884 VKGAVYSMVEFNGKLLASI-NSTVRLYEWTTEKE 916 (1158)
T ss_dssp ESSCEEEEEEETTEEEEEE-TTEEEEEEECTTSC
T ss_pred cCCcCEEEeeeCCEEEEEc-CCEEEEEECCCCce
Confidence 3456899999999888888 58999999997653
No 323
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=56.77 E-value=98 Score=29.28 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=53.9
Q ss_pred eeeeecc-eeEEeecCceeeEEEcccceEEEeec-----cccCCCceEEEEe----eceeEEEEec--------CeEEEE
Q 015220 285 FIEQFNE-KLLVKQENENLQILDVRNFELTEVSR-----TEFMTPSAFIFLY----ENQLFLTFRN--------RTVAVW 346 (411)
Q Consensus 285 FLE~~~e-kllIKQe~~~LkI~dL~t~e~~~v~~-----T~f~hpsAfifLy----~sqlFlSfsd--------~tI~iW 346 (411)
-|+..++ .++|......|+++| .+++ ..+.. .....|..+.+-. ...+|++-+. +.|..|
T Consensus 33 ~ia~~pdG~l~V~e~~g~I~~~d-~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~ 110 (354)
T 3a9g_A 33 SIAPLGGGRYLVTERPGRLVLIS-PSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRG 110 (354)
T ss_dssp EEEEEETTEEEEEETTTEEEEEC-SSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCEEEEEe-CCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEE
Confidence 3555543 567777778888887 5665 33211 1112343333322 1377888753 678888
Q ss_pred ecCCc---------eeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 347 NFRGE---------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 347 n~~Ge---------l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
++.+. +++.+... ..-+.+.+.+.|||.|.|+-
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~~----~~h~~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 111 RLDGSTFKLKEVKTLIDGIPGA----YIHNGGRIRFGPDGMLYITT 152 (354)
T ss_dssp EECSSSCCEEEEEEEEEEEECC----SSCCCCCEEECTTSCEEEEC
T ss_pred EECCCCcCcCccEEEEEcCCCC----CCcCCceEEECCCCcEEEEE
Confidence 88754 22333311 11145789999999999984
No 324
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=56.32 E-value=68 Score=30.38 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=48.5
Q ss_pred ccccCCCceEEEEeeceeEEEEecCeEEEEecCCc-eeeeeccccccCCCCccceEEEcCC----CCEEEEEec
Q 015220 317 RTEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGE-LVTSFEDHLLWHPDCNTNNIYITSD----QDLIISYCK 385 (411)
Q Consensus 317 ~T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~Ge-l~~s~e~H~~~~~~c~~n~i~Is~D----qd~iiS~~~ 385 (411)
.+.+.+|.++.|.....+|++=+++.|.+++..|+ .+.++. ......--..-|+++|| |.+.++++.
T Consensus 25 a~~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~--v~~~g~~g~~gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 25 ASDLEVPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFD--VANVGEAGLLGLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp ECSCSCEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred eCCCCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccc--eeecCCCceeeEEeCCCCCcCCEEEEEEec
Confidence 35677999999988778999998899999987786 333332 11111224567999997 888898885
No 325
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=55.89 E-value=15 Score=40.85 Aligned_cols=36 Identities=11% Similarity=0.250 Sum_probs=24.6
Q ss_pred CCCceEEEEeec---eeEEEE-ecCeEEEEecC-Cceeeee
Q 015220 321 MTPSAFIFLYEN---QLFLTF-RNRTVAVWNFR-GELVTSF 356 (411)
Q Consensus 321 ~hpsAfifLy~s---qlFlSf-sd~tI~iWn~~-Gel~~s~ 356 (411)
..|.+.+.++.. ...+|+ .|+++||||+. |.++.+.
T Consensus 235 ~~~~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 235 RSPNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CCTTCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred CCcceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 344444443332 455677 99999999998 9888764
No 326
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=54.27 E-value=1.3e+02 Score=27.57 Aligned_cols=143 Identities=10% Similarity=0.122 Sum_probs=75.1
Q ss_pred EEeeCCCCeEEEeecCCCeEEEEEe--eCceEEEEeccCceeEEEEe-CCEEEEEEecCCCceeeEEEEecC-CcEEeEe
Q 015220 198 VEFDDVNGKVLTYSAQDSIYKVFDL--KNYTMLYSISDKNVQEIKIS-PGIMLLIFTKASGHVPLKILSIED-GTVLKSF 273 (411)
Q Consensus 198 vEFDd~NGkiLt~~~~ds~ykVWdL--~~Ys~iysLs~~~VqeIkIS-dG~~Lai~q~t~~~ipiKIl~I~t-G~~L~t~ 273 (411)
+.|++ +|+.++.......|+-+|- ++.+.+-......+..+.++ +|.++++... ..+ .+.+ .+ |+--...
T Consensus 168 ~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~--G~~--~~s~-~D~G~tW~~~ 241 (327)
T 2xbg_A 168 LNRSP-SGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNG--GKI--AFSD-PDNSENWGEL 241 (327)
T ss_dssp EEECT-TSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEETT--TEE--EEEE-TTEEEEECCC
T ss_pred EEEcC-CCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeCC--ceE--EEec-CCCCCeeEec
Confidence 34554 6788888888888988884 77787765556688888887 7776666542 221 1111 23 3332222
Q ss_pred eec-cccCCcceeeeeeccee-EEeecCceeeEEEcccceEEEeeccccCCCce---EEEEeeceeEEEEecCeEEEEe
Q 015220 274 NHL-LHRNKKVDFIEQFNEKL-LVKQENENLQILDVRNFELTEVSRTEFMTPSA---FIFLYENQLFLTFRNRTVAVWN 347 (411)
Q Consensus 274 ~~L-L~h~K~I~FLE~~~ekl-lIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsA---fifLy~sqlFlSfsd~tI~iWn 347 (411)
... +.+...+.-+...+++. ++.-.+..| .+..-.|+.+....+...+|.. +.|....++++.+.+++|.-++
T Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp BCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred cCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 211 22333444455444444 343333333 3444446666522221122333 3333344667777777655444
No 327
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=54.23 E-value=1.3e+02 Score=28.30 Aligned_cols=95 Identities=9% Similarity=0.089 Sum_probs=54.6
Q ss_pred eeeeecc-eeEEeecCceeeEEEcccceEEEeec-----cccCCCceEEEEee----ceeEEEEec------CeEEEEec
Q 015220 285 FIEQFNE-KLLVKQENENLQILDVRNFELTEVSR-----TEFMTPSAFIFLYE----NQLFLTFRN------RTVAVWNF 348 (411)
Q Consensus 285 FLE~~~e-kllIKQe~~~LkI~dL~t~e~~~v~~-----T~f~hpsAfifLy~----sqlFlSfsd------~tI~iWn~ 348 (411)
-|+..++ .+++.+....|.+++ +++...+.. .....|..+.+-.. ..+|++-.. +.|..|++
T Consensus 35 ~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~ 112 (352)
T 2ism_A 35 ALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRH 112 (352)
T ss_dssp EEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEe
Confidence 3555555 467777778888888 665443221 11234444433222 367887753 67888888
Q ss_pred CCc-------eeeeeccccccCCCCccceEEEcCCCCEEEEE
Q 015220 349 RGE-------LVTSFEDHLLWHPDCNTNNIYITSDQDLIISY 383 (411)
Q Consensus 349 ~Ge-------l~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~ 383 (411)
.+. +++.+..+. ...=+.+.+.++|||.+.|+-
T Consensus 113 ~~~~~~~~~~l~~~~p~~~--~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 113 LGERGVLDRVVLDGIPARP--HGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp CSSCEEEEEEEEEEECCCT--TCCCCCCCEEECTTSCEEEEC
T ss_pred CCCCcCceEEEEEeCCCCC--CCCcCCceEEECCCCCEEEEE
Confidence 753 222232100 011134789999999998884
No 328
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=50.37 E-value=2e+02 Score=28.52 Aligned_cols=144 Identities=13% Similarity=0.280 Sum_probs=90.1
Q ss_pred EEEeecC--CCeEEEEEee-CceEEEEecc---------CceeEEEE--e--CC-EEEEEEecCCCceeeEEEEe---c-
Q 015220 207 VLTYSAQ--DSIYKVFDLK-NYTMLYSISD---------KNVQEIKI--S--PG-IMLLIFTKASGHVPLKILSI---E- 265 (411)
Q Consensus 207 iLt~~~~--ds~ykVWdL~-~Ys~iysLs~---------~~VqeIkI--S--dG-~~Lai~q~t~~~ipiKIl~I---~- 265 (411)
+.+++.. ++++.||++. ....|..+.+ .++.-+.+ + .| .++++..... .+..|.| .
T Consensus 89 a~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G---~~~q~~l~~~~~ 165 (355)
T 3amr_A 89 AAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEG---EFEQYELKADKN 165 (355)
T ss_dssp EEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSS---EEEEEEEEECTT
T ss_pred EEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCC---eEEEEEEEeCCC
Confidence 4666666 7899999884 2335777732 35555666 5 34 3555555553 5555556 3
Q ss_pred ---CCcEEeEeeeccccCCcceeeeeec--ceeEEeecCceeeEEEcc-----cceEEE-eecc-ccCCCceEEEEeec-
Q 015220 266 ---DGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQENENLQILDVR-----NFELTE-VSRT-EFMTPSAFIFLYEN- 332 (411)
Q Consensus 266 ---tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~~~LkI~dL~-----t~e~~~-v~~T-~f~hpsAfifLy~s- 332 (411)
+++++++|. |+ .+++.+..-+ +.|++.+|+.-|--||.. +++.+- +.-. +...++....++..
T Consensus 166 g~~~~~lVR~f~--lg--sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~ 241 (355)
T 3amr_A 166 GYISGKKVRAFK--MN--SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAAD 241 (355)
T ss_dssp SCEEEEEEEEEE--CS--SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGG
T ss_pred CcccceEEEEec--CC--CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCC
Confidence 445566654 34 4788888874 788999999887777755 344443 2212 22356665544343
Q ss_pred --e-eEEEE-ecCeEEEEecC--Cceeeeec
Q 015220 333 --Q-LFLTF-RNRTVAVWNFR--GELVTSFE 357 (411)
Q Consensus 333 --q-lFlSf-sd~tI~iWn~~--Gel~~s~e 357 (411)
. ||+|= .+++..||+.+ .+.+.+|.
T Consensus 242 g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 242 GKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp GCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 2 55555 68899999997 56788883
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=44.60 E-value=2.9e+02 Score=28.70 Aligned_cols=180 Identities=14% Similarity=0.129 Sum_probs=93.8
Q ss_pred CCeEEEeecCC------CeEEEEEeeCc--eEEEEeccC--ceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEe
Q 015220 204 NGKVLTYSAQD------SIYKVFDLKNY--TMLYSISDK--NVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSF 273 (411)
Q Consensus 204 NGkiLt~~~~d------s~ykVWdL~~Y--s~iysLs~~--~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~ 273 (411)
+|++.+.++.+ +..-+||..+. +.+-.+... .-..+.+.+|.+++++-..... -+-+||+++++=..-.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEcc
Confidence 78898888753 34567777763 344333322 2233333588888777665555 7888888887633211
Q ss_pred ee-ccccCCcceeeeeec---ceeEEeecC--------ceeeEEEcccce------EEEeec----cccCCCceEEEEee
Q 015220 274 NH-LLHRNKKVDFIEQFN---EKLLVKQEN--------ENLQILDVRNFE------LTEVSR----TEFMTPSAFIFLYE 331 (411)
Q Consensus 274 ~~-LL~h~K~I~FLE~~~---ekllIKQe~--------~~LkI~dL~t~e------~~~v~~----T~f~hpsAfifLy~ 331 (411)
.. -++...--......+ ++++|--+. +.+-+||+.+.+ -..++. ..++| -.++..
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~---~~~~~~ 606 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS---QIKYIT 606 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC---EEEEEE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc---eEEEeC
Confidence 00 011111111223323 567665432 568899999998 455533 22222 223455
Q ss_pred -ceeEEEE-e--------cCeEEEEecCCceeeeec--ccc--ccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 332 -NQLFLTF-R--------NRTVAVWNFRGELVTSFE--DHL--LWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 332 -sqlFlSf-s--------d~tI~iWn~~Gel~~s~e--~H~--~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
+++|+.+ . .+.+.+||+.-.--+... ... .-.|...--......||.++|-|..+.
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~ 676 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGAT 676 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCcc
Confidence 7888887 2 356889998844333221 111 001111112344556778888877653
No 330
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=43.66 E-value=1.1e+02 Score=28.66 Aligned_cols=66 Identities=12% Similarity=0.207 Sum_probs=46.8
Q ss_pred cccCCCceEEEEeeceeEEEEecCeEEEEecCCce--eeeeccccccCCCCccceEEEcCC----CCEEEEEecC
Q 015220 318 TEFMTPSAFIFLYENQLFLTFRNRTVAVWNFRGEL--VTSFEDHLLWHPDCNTNNIYITSD----QDLIISYCKA 386 (411)
Q Consensus 318 T~f~hpsAfifLy~sqlFlSfsd~tI~iWn~~Gel--~~s~e~H~~~~~~c~~n~i~Is~D----qd~iiS~~~d 386 (411)
+.+.+|.++.|.....+|++=+++.|.+++ .|+. +.++. ........-+-|+++|| +.+.+++..+
T Consensus 28 ~~l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~--v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 28 GGLEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELS--VYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CCCSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECC--CCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred CCCCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecce--EeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 567789988888777889888889999998 7763 22222 11122335678999998 7788888754
No 331
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=41.37 E-value=1e+02 Score=29.94 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=24.3
Q ss_pred ecceeEEeecCceeeEEEcccceEEEee
Q 015220 289 FNEKLLVKQENENLQILDVRNFELTEVS 316 (411)
Q Consensus 289 ~~ekllIKQe~~~LkI~dL~t~e~~~v~ 316 (411)
..+.+++-..+.++-.+|+.||+.+-.-
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 5777899999999999999999998743
No 332
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=41.30 E-value=24 Score=30.41 Aligned_cols=59 Identities=19% Similarity=0.325 Sum_probs=46.0
Q ss_pred eEEEEeccCceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCccee
Q 015220 226 TMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (411)
Q Consensus 226 s~iysLs~~~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~F 285 (411)
..++.++-+++....+..|+.+....+....+|.+|-.+..+++...|||.|.= |.+.|
T Consensus 79 ~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG-~~L~F 137 (151)
T 2kr7_A 79 SYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMVDYNHPLAG-KTLAF 137 (151)
T ss_dssp CEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEEEECCTTSC-CCEEE
T ss_pred ceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEECCCcCCC-CEEEE
Confidence 466777766664455668998888777777799999999999999999998865 44444
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=37.07 E-value=2.3e+02 Score=25.28 Aligned_cols=189 Identities=10% Similarity=0.001 Sum_probs=100.6
Q ss_pred EEEeecCCCeEEEEEeeCceE-EEEecc---CceeEEEEeCCEEEEEEec-----C-CCc--eeeEEEEecCCcEEeEee
Q 015220 207 VLTYSAQDSIYKVFDLKNYTM-LYSISD---KNVQEIKISPGIMLLIFTK-----A-SGH--VPLKILSIEDGTVLKSFN 274 (411)
Q Consensus 207 iLt~~~~ds~ykVWdL~~Ys~-iysLs~---~~VqeIkISdG~~Lai~q~-----t-~~~--ipiKIl~I~tG~~L~t~~ 274 (411)
+++.++ +..-+||..+.+- ...++. ..-..+.+.++.++++.-. . ... ..+-++|+.+++-..- .
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-P 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-C
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-C
Confidence 344444 3455566655442 233332 2233344446666666653 1 111 2267788888874321 1
Q ss_pred eccccCCcceeeeeecceeEEeec---------CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-e-----
Q 015220 275 HLLHRNKKVDFIEQFNEKLLVKQE---------NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-R----- 339 (411)
Q Consensus 275 ~LL~h~K~I~FLE~~~ekllIKQe---------~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-s----- 339 (411)
.++...--..+...++++++--+ .+.+-+||+.+++-.+++..-......-.++...++|+.+ .
T Consensus 84 -~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 84 -PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp -CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred -CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 22332333456677888877644 2458899999998877643221111112233556888887 3
Q ss_pred -cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 -NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 -d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+.+||+.-+--+.+.. + |..-....+..-++.+.+.|..+.. ....++.++|+.|++
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~-~---p~~r~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAP-M---QTARSLFGATVHDGRIIVAAGVTDT-----GLTSSAEVYSITDNK 223 (315)
T ss_dssp BCCCEEEEETTTTEEEECCC-C---SSCCBSCEEEEETTEEEEEEEECSS-----SEEEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCeEEECCC-C---CCchhceEEEEECCEEEEEeccCCC-----CccceEEEEECCCCe
Confidence 2578888888543333321 1 1112222233337788888776541 122578888888765
No 334
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=34.67 E-value=3.1e+02 Score=26.19 Aligned_cols=192 Identities=10% Similarity=0.196 Sum_probs=106.3
Q ss_pred ccceehhhhccccceeeeccc-------ccEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhh
Q 015220 104 ARDIVFALAQSGVCAAFCRET-------NQRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIR 176 (411)
Q Consensus 104 a~dii~~L~~sG~c~af~~~t-------~~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~ 176 (411)
.+|+++.|++.|....-+..+ |+-+--++...+..+..+|--..++.|++++ +.=++..++..+|.
T Consensus 2 ~E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT-------~~Gr~y~~~~~~lp 74 (327)
T 3uc1_A 2 AEDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFT-------TQGRVYRAKAYDLP 74 (327)
T ss_dssp CCEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEE-------TTSEEEEEEGGGSC
T ss_pred CccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEe-------CCCeEEEEEHHHCc
Confidence 368999999999988654211 2334566666777888888888899998866 44577777777886
Q ss_pred hCCC-CCCCcc---e---eecccCCCCeEEeeC-CCCeEEEeecCCCeEEEEEeeCceEEE-------Eec-cCceeEEE
Q 015220 177 RGKP-DAGFAL---F---ESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTMLY-------SIS-DKNVQEIK 240 (411)
Q Consensus 177 ~gk~-~~~~~L---F---~~~~l~~PgfvEFDd-~NGkiLt~~~~ds~ykVWdL~~Ys~iy-------sLs-~~~VqeIk 240 (411)
.++- ..|.|+ + +.+.+.. .+-.++ .++..++....++-+|--.+..|.... .+. ++++..+.
T Consensus 75 ~~~r~~~G~~i~~~l~l~~~e~i~~--~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~ 152 (327)
T 3uc1_A 75 EASRTARGQHVANLLAFQPEERIAQ--VIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAV 152 (327)
T ss_dssp BCCSSSCCEEHHHHTTCCTTCCEEE--EEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEE
T ss_pred CCCccCCCEEHHHccCCCCCCEEEE--EEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEE
Confidence 6643 455553 1 1222221 112222 235566667788999999998887432 333 34666665
Q ss_pred Ee-CCEEEEEEecCCCceeeEEE--Eec------CCcEEeEeeeccccCCcceeeeeec--ceeEEeecCceeeEEEcc
Q 015220 241 IS-PGIMLLIFTKASGHVPLKIL--SIE------DGTVLKSFNHLLHRNKKVDFIEQFN--EKLLVKQENENLQILDVR 308 (411)
Q Consensus 241 IS-dG~~Lai~q~t~~~ipiKIl--~I~------tG~~L~t~~~LL~h~K~I~FLE~~~--ekllIKQe~~~LkI~dL~ 308 (411)
+. +..-|++.......+-+++. .|. .|..+ ..|...-+|-.+.... +++++..+....|.-.+.
T Consensus 153 ~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~----i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 153 LCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQG----MRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp EECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEES----SCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeee----ecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 55 22223333333333334444 333 12111 1122333333333332 367787777777776653
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=34.48 E-value=2.6e+02 Score=25.23 Aligned_cols=122 Identities=11% Similarity=-0.029 Sum_probs=63.2
Q ss_pred CeEEEEEeeCce--EEEEeccC-ce-eEEEEeCCEEEEEEecCCC---ceeeEEEEe--cCCcEEeEeeeccccCCcc--
Q 015220 215 SIYKVFDLKNYT--MLYSISDK-NV-QEIKISPGIMLLIFTKASG---HVPLKILSI--EDGTVLKSFNHLLHRNKKV-- 283 (411)
Q Consensus 215 s~ykVWdL~~Ys--~iysLs~~-~V-qeIkISdG~~Lai~q~t~~---~ipiKIl~I--~tG~~L~t~~~LL~h~K~I-- 283 (411)
+..-+||..+-+ .+-.+... .- ..+.+.++.++++.-...+ ..-+.++++ ++.+ ++..-.++.....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~--W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLK--WNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CE--EEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCc--EEecCCCCCCccccc
Confidence 467777776643 55555532 22 4555667877777543222 233555666 4443 3322122222222
Q ss_pred eeeeeecceeEEeecC-----------------------ceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE
Q 015220 284 DFIEQFNEKLLVKQEN-----------------------ENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF 338 (411)
Q Consensus 284 ~FLE~~~ekllIKQe~-----------------------~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf 338 (411)
..+...+++++|--+. ..+.+||+.+.+-.+++..-..--....++..+++|+.+
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 323 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIG 323 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEe
Confidence 2377888998886542 257899999988777643221111112234566888888
No 336
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=33.04 E-value=22 Score=29.81 Aligned_cols=30 Identities=27% Similarity=0.183 Sum_probs=22.3
Q ss_pred cCceeeEEEcccceEEEeeccc--cCCCceEEEEe
Q 015220 298 ENENLQILDVRNFELTEVSRTE--FMTPSAFIFLY 330 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~v~~T~--f~hpsAfifLy 330 (411)
++++++|||+.+|++++ |+ .+-+|-.++|.
T Consensus 15 ~~E~V~IvNvnNG~Rfe---TYvI~GerSG~I~lN 46 (97)
T 1uhe_A 15 EGMKVEIVDVNNGERFS---TYVILGKKRGEICVN 46 (97)
T ss_dssp TTCEEEEEETTTCCEEE---EECEEECSTTCEEEE
T ss_pred CCCEEEEEECCCCceEE---EEEEeeccCCeEEEc
Confidence 68999999999999999 54 22335556654
No 337
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=32.08 E-value=24 Score=29.60 Aligned_cols=17 Identities=24% Similarity=0.198 Sum_probs=16.2
Q ss_pred cCceeeEEEcccceEEE
Q 015220 298 ENENLQILDVRNFELTE 314 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~ 314 (411)
++++++|||+.+|++++
T Consensus 16 ~~E~V~IvNvnNG~Rf~ 32 (96)
T 1vc3_B 16 PFEQVDIYDITNGARLT 32 (96)
T ss_dssp TTCEEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCceEE
Confidence 68999999999999999
No 338
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=31.16 E-value=34 Score=30.48 Aligned_cols=59 Identities=20% Similarity=0.310 Sum_probs=45.0
Q ss_pred eEEEEeccCcee-EEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCccee
Q 015220 226 TMLYSISDKNVQ-EIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (411)
Q Consensus 226 s~iysLs~~~Vq-eIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~F 285 (411)
.+++.++-+++. +..+..|+++.+..+....+|.+|-.+.+.++...|||.|.= |.+.|
T Consensus 97 ~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~vD~NHPLAG-k~L~F 156 (169)
T 4dt4_A 97 DLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAG-QTVHF 156 (169)
T ss_dssp GGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEEECSCTTTT-CCEEE
T ss_pred HHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEEeCCCccCC-CEEEE
Confidence 456666655553 234567998888887778899999999999999999998875 44444
No 339
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=30.33 E-value=2.4e+02 Score=24.49 Aligned_cols=66 Identities=11% Similarity=0.195 Sum_probs=41.2
Q ss_pred eEEEeecCCC------eEEEEEeeCceEEEEeccCceeEEEEeCCEEEEEEecCCCceeeEEEEecCCcEEeE
Q 015220 206 KVLTYSAQDS------IYKVFDLKNYTMLYSISDKNVQEIKISPGIMLLIFTKASGHVPLKILSIEDGTVLKS 272 (411)
Q Consensus 206 kiLt~~~~ds------~ykVWdL~~Ys~iysLs~~~VqeIkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t 272 (411)
++++....++ ...||..+..+.+|.|.=+.=.+|++.+.|-+++.+. .....++.-+|.-|..+..
T Consensus 48 ~V~s~d~~~gk~~~~~v~~v~~~~~~~~~~~I~t~~G~~I~~T~~H~~~v~~~-g~~~~~~A~eLk~GD~v~v 119 (185)
T 2lcj_A 48 KVYSIDLETGKVVLTDIEDVIKAPATDHLIRFELEDGRSFETTVDHPVLVYEN-GRFIEKRAFEVKEGDKVLV 119 (185)
T ss_dssp EEEEEETTTTEEEEEEEEEEEEEECCSCEEEEEETTSCEEEECSSSEEEEEET-TEEEEEEGGGCCTTCEEEE
T ss_pred EEEEEECCCCcEEEEEeeeEEEcCCCceEEEEEECCCCEEEECCCCEEEEecC-CeEEEEEHHHCCCCCEEEE
Confidence 4555553433 3478888877778888755556888888777776654 2233445555555665554
No 340
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=30.15 E-value=2.4e+02 Score=27.84 Aligned_cols=111 Identities=10% Similarity=0.065 Sum_probs=59.9
Q ss_pred cCc--eeeEEEcccceEEE-------eeccccCCCc-eEEEEeeceeEEEE-ecCeEEEEecCCceeeee--cccc-ccC
Q 015220 298 ENE--NLQILDVRNFELTE-------VSRTEFMTPS-AFIFLYENQLFLTF-RNRTVAVWNFRGELVTSF--EDHL-LWH 363 (411)
Q Consensus 298 e~~--~LkI~dL~t~e~~~-------v~~T~f~hps-AfifLy~sqlFlSf-sd~tI~iWn~~Gel~~s~--e~H~-~~~ 363 (411)
..+ .|.++||.++++.+ .|+..- ++. .+-.+....+|++- ....|-+-|.+|+.+.++ .... .++
T Consensus 48 ~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~-~~~~~~~i~~~DsI~i~~~~~~~i~l~n~~G~~~~k~~~~~~~~~~~ 126 (369)
T 3s9j_A 48 QKSLYDIVIFDIENQQIAKRIPLHKTGPNGLP-AVFGSRPSPDSQYILVAQNNISRLSSINSQGEIIRNYNFQTPEGRFT 126 (369)
T ss_dssp STTCCEEEEEETTTTEEEEEEECBSSSTTBCT-TCCCEEESSSTTSEEEEEGGGTEEEEECTTCCEEEEEECCCTTSCCC
T ss_pred CCCcCcEEEEECCCCceeeeeccccCCCCCcc-cceeeEEecCCCEEEEEeCCcceEEEECCCceEEEEEecCCCccccc
Confidence 455 89999999988774 222222 232 23334444777765 555788899999988854 2222 222
Q ss_pred CC---CccceEEEcCCCCEEEEEecCCC---CCccccCCceEEEeeecceeee
Q 015220 364 PD---CNTNNIYITSDQDLIISYCKADS---DDPLAEGNGKLFVSLLMFVTCK 410 (411)
Q Consensus 364 ~~---c~~n~i~Is~Dqd~iiS~~~d~~---~~~~~~~~gtI~i~~i~tGk~~ 410 (411)
+- -..|+-+...|+.+.++--.... ...|.. ...+-+.|+.|+++.
T Consensus 127 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~k-~~~~a~~dl~~~~~~ 178 (369)
T 3s9j_A 127 PLSFGSYYNAPAFIKDSCIFLRQEILKPDMKKEDWPR-THMFASQDLRTGEVK 178 (369)
T ss_dssp CCCCBTTTTBCCEEETTEEEEECCCSSSSCCGGGGGG-SEEEEEEETTTCCEE
T ss_pred cccccccccCcceecCceEEEeccccccccchhhhcc-CceEEEEECCCCcEE
Confidence 21 22355445555556654332210 011222 236666777777764
No 341
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=29.99 E-value=27 Score=29.59 Aligned_cols=17 Identities=35% Similarity=0.387 Sum_probs=16.1
Q ss_pred cCceeeEEEcccceEEE
Q 015220 298 ENENLQILDVRNFELTE 314 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~ 314 (411)
++++++|||+.+|++++
T Consensus 16 ~~E~V~I~NvnNG~Rf~ 32 (102)
T 3plx_B 16 EYEKVQVVNVNNGARFE 32 (102)
T ss_dssp TTCEEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCcEEE
Confidence 68999999999999998
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=29.67 E-value=3e+02 Score=24.48 Aligned_cols=188 Identities=9% Similarity=0.011 Sum_probs=100.9
Q ss_pred CeEEEeecCCCeEEEEEeeCceEE-EEec---cCceeEEEEeCCEEEEEEecC----C--Cc--eeeEEEEecCCcEEeE
Q 015220 205 GKVLTYSAQDSIYKVFDLKNYTML-YSIS---DKNVQEIKISPGIMLLIFTKA----S--GH--VPLKILSIEDGTVLKS 272 (411)
Q Consensus 205 GkiLt~~~~ds~ykVWdL~~Ys~i-ysLs---~~~VqeIkISdG~~Lai~q~t----~--~~--ipiKIl~I~tG~~L~t 272 (411)
+.+++.++. ...+||..+.+-. ..+. ...-..+...++.++++.-.. . .. ..+-++|+.+++-..-
T Consensus 16 ~~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 93 (318)
T 2woz_A 16 DLILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL 93 (318)
T ss_dssp EEEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC
T ss_pred chhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC
Confidence 355555553 2456666655522 2332 123344445577777776521 1 11 1267788888775442
Q ss_pred eeeccccCCcceeeeeecceeEEeecC--------ceeeEEEcccceEEEeec---cccCCCceEEEEeeceeEEEE-e-
Q 015220 273 FNHLLHRNKKVDFIEQFNEKLLVKQEN--------ENLQILDVRNFELTEVSR---TEFMTPSAFIFLYENQLFLTF-R- 339 (411)
Q Consensus 273 ~~~LL~h~K~I~FLE~~~ekllIKQe~--------~~LkI~dL~t~e~~~v~~---T~f~hpsAfifLy~sqlFlSf-s- 339 (411)
. .++...--..+...+++++|--+. ..+-+||+.+++-.+++. ....|.. +++..++|+.+ .
T Consensus 94 ~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~---~~~~~~iyv~GG~~ 168 (318)
T 2woz_A 94 P--PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNV---ISHNGMIYCLGGKT 168 (318)
T ss_dssp S--CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEE---EEETTEEEEECCEE
T ss_pred C--CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEE---EEECCEEEEEcCCC
Confidence 1 223323334566678888776432 458899999998887542 2333322 23556888877 3
Q ss_pred -----cCeEEEEecCCceeeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeeccee
Q 015220 340 -----NRTVAVWNFRGELVTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVT 408 (411)
Q Consensus 340 -----d~tI~iWn~~Gel~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk 408 (411)
.+.+.++|+.-+--+.+.. +. .+-+.-.. ..-++.+.|-|..+.. ....++.++|+.|++
T Consensus 169 ~~~~~~~~~~~yd~~~~~W~~~~~-~p-~~r~~~~~--~~~~~~iyv~GG~~~~-----~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 169 DDKKCTNRVFIYNPKKGDWKDLAP-MK-TPRSMFGV--AIHKGKIVIAGGVTED-----GLSASVEAFDLKTNK 233 (318)
T ss_dssp SSSCBCCCEEEEETTTTEEEEECC-CS-SCCBSCEE--EEETTEEEEEEEEETT-----EEEEEEEEEETTTCC
T ss_pred CCCCccceEEEEcCCCCEEEECCC-CC-CCcccceE--EEECCEEEEEcCcCCC-----CccceEEEEECCCCe
Confidence 2468888888443333321 11 12222222 2236777777765431 122577888888765
No 343
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=28.59 E-value=29 Score=29.95 Aligned_cols=17 Identities=41% Similarity=0.546 Sum_probs=16.4
Q ss_pred cCceeeEEEcccceEEE
Q 015220 298 ENENLQILDVRNFELTE 314 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~ 314 (411)
++++++|||+.+|++++
T Consensus 43 ~~E~V~I~NvnNG~Rf~ 59 (114)
T 3oug_A 43 ENEKVQVVNLNNGERLE 59 (114)
T ss_dssp TTBEEEEEETTTCCEEE
T ss_pred cCCEEEEEECCCCceEE
Confidence 78999999999999998
No 344
>2i9o_A MHB8A peptide; beta-hairpin, alpha-helix, de novo protein; NMR {Synthetic}
Probab=28.16 E-value=18 Score=25.13 Aligned_cols=8 Identities=88% Similarity=1.755 Sum_probs=4.3
Q ss_pred CCCCCCcc
Q 015220 2 EGGGGGGR 9 (411)
Q Consensus 2 ~~~~~~~~ 9 (411)
|||||||.
T Consensus 12 eggggggg 19 (37)
T 2i9o_A 12 EGGGGGGG 19 (37)
T ss_dssp CCSCCCCS
T ss_pred ecCCCCCc
Confidence 56655553
No 345
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.40 E-value=5.1e+02 Score=26.10 Aligned_cols=186 Identities=14% Similarity=0.184 Sum_probs=92.4
Q ss_pred CCCeEEEeecCCCeEEEEEeeCceEEEEec-cCceeEEEE-eCCEEEEEEec-------CCCceeeEEEEec---CCcEE
Q 015220 203 VNGKVLTYSAQDSIYKVFDLKNYTMLYSIS-DKNVQEIKI-SPGIMLLIFTK-------ASGHVPLKILSIE---DGTVL 270 (411)
Q Consensus 203 ~NGkiLt~~~~ds~ykVWdL~~Ys~iysLs-~~~VqeIkI-SdG~~Lai~q~-------t~~~ipiKIl~I~---tG~~L 270 (411)
|+.+|++--+ ..++-||||.+=+.|-+.. .|.|-==|- |+..+-++-+. ..+.-|.|+++.+ .+.-+
T Consensus 76 P~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QI 154 (365)
T 2xzh_A 76 PASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQI 154 (365)
T ss_dssp SSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEE
T ss_pred CCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEEcCCcEEEEcccCCCCCceeeecchhcccceE
Confidence 3567666554 8899999999988885544 244433332 23333222221 1245677777765 12111
Q ss_pred eEeeeccccCCcceee---eeecceeEEeecCceeeEEEcccceEEEeeccccCCCceEEEEeec-----eeEEEE-ec-
Q 015220 271 KSFNHLLHRNKKVDFI---EQFNEKLLVKQENENLQILDVRNFELTEVSRTEFMTPSAFIFLYEN-----QLFLTF-RN- 340 (411)
Q Consensus 271 ~t~~~LL~h~K~I~FL---E~~~ekllIKQe~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~s-----qlFlSf-sd- 340 (411)
-.. .-.+.-.-+ -++.+.-.|+ .++|+|.+..+... .+-+|-.+|.-+-.. .-++.| ..
T Consensus 155 InY----~~d~~~kW~~l~GI~~~~~~v~---G~mQLYS~er~~sQ----~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~ 223 (365)
T 2xzh_A 155 INY----RTDAKQKWLLLTGISAQQNRVV---GAMQLYSVDRKVSQ----PIEGHAASFAQFKMEGNAEESTLFCFAVRG 223 (365)
T ss_dssp EEE----EECTTSCEEEEEEEEEETTEEE---EEEEEEETTTTEEE----EECCSEEEEEEECCTTCSSCEEEEEEEEEE
T ss_pred EEE----EECCCCCEEEEEeEeccCCccc---eeEEEEeecccccc----eeeeeeeeeEEEecCCCCCCceEEEEEEec
Confidence 110 011111111 1111111222 68999999997766 455677777543211 224444 22
Q ss_pred ---CeEEEEecCC--ceeeeeccccc---cCC---CCccceEEEcCCCCEEEEEecCCCCCccccCCceEEEeeecceee
Q 015220 341 ---RTVAVWNFRG--ELVTSFEDHLL---WHP---DCNTNNIYITSDQDLIISYCKADSDDPLAEGNGKLFVSLLMFVTC 409 (411)
Q Consensus 341 ---~tI~iWn~~G--el~~s~e~H~~---~~~---~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~gtI~i~~i~tGk~ 409 (411)
+++.|=++.- +--..|..... .-| +=.-=.+.+|+-.++|.-=.|- |-|+|+|++||.|
T Consensus 224 ~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~----------G~ihlyDleTgt~ 293 (365)
T 2xzh_A 224 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKY----------GYIHLYDLETGTC 293 (365)
T ss_dssp TTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETT----------SEEEEEETTTCCE
T ss_pred CCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCC----------cEEEEEEcccCcE
Confidence 3666666521 11112222110 001 1111234445555555444433 7999999999999
Q ss_pred e
Q 015220 410 K 410 (411)
Q Consensus 410 ~ 410 (411)
+
T Consensus 294 i 294 (365)
T 2xzh_A 294 I 294 (365)
T ss_dssp E
T ss_pred E
Confidence 7
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=26.35 E-value=1.3e+02 Score=28.37 Aligned_cols=69 Identities=19% Similarity=0.381 Sum_probs=47.4
Q ss_pred cccCCCceEEEEeece-eEEEEecCeEEEEecCCceeeeeccc--cccCCCCccceEEEcCC----CCEEEEEecC
Q 015220 318 TEFMTPSAFIFLYENQ-LFLTFRNRTVAVWNFRGELVTSFEDH--LLWHPDCNTNNIYITSD----QDLIISYCKA 386 (411)
Q Consensus 318 T~f~hpsAfifLy~sq-lFlSfsd~tI~iWn~~Gel~~s~e~H--~~~~~~c~~n~i~Is~D----qd~iiS~~~d 386 (411)
+...+|.++.|+.-.. +|++=+.+.|.+++.+|...+.+.+- ......--..-|+++|| +.+-++++..
T Consensus 15 ~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~ 90 (353)
T 2g8s_A 15 DKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEV 90 (353)
T ss_dssp EEESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEE
T ss_pred CCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCC
Confidence 4567899988888777 89888889999999877654333321 11111223467899984 8888888764
No 347
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=25.93 E-value=34 Score=30.56 Aligned_cols=17 Identities=35% Similarity=0.368 Sum_probs=16.5
Q ss_pred cCceeeEEEcccceEEE
Q 015220 298 ENENLQILDVRNFELTE 314 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~ 314 (411)
++++++|||+.+|++++
T Consensus 57 ~~EkV~IvNvnNG~Rfe 73 (143)
T 1pqh_A 57 ENEAIDIWNVTNGKRFS 73 (143)
T ss_dssp TTCEEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCceEE
Confidence 89999999999999998
No 348
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=25.88 E-value=4.3e+02 Score=25.08 Aligned_cols=117 Identities=12% Similarity=0.164 Sum_probs=68.0
Q ss_pred eeccceehhhhccccceeeecccc--cEEEEEeCCCCceEEEEEeecCCCeEEEEEeEecCCCceeeeEeeehhhhhhCC
Q 015220 102 VAARDIVFALAQSGVCAAFCRETN--QRICFLNVTADEVIRSLFYNKNNDSLITVSVYASDNFSSLRCRSTRIEYIRRGK 179 (411)
Q Consensus 102 v~a~dii~~L~~sG~c~af~~~t~--~~ic~lN~s~~evIrsifyN~~n~slI~vSv~~sd~~s~L~cr~~~~~~i~~gk 179 (411)
++-+++++.+++.|.-..-+..+- +...-++...+..+..+|.-..++.|++++ +.=++..++..+|..+.
T Consensus 2 I~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d~ll~fT-------~~Gr~~~~~~~elp~~~ 74 (323)
T 1wp5_A 2 VASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKDVLLLFT-------NKGNYLYCPVHELPDIR 74 (323)
T ss_dssp CSCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTSEEEEEE-------TTSEEEEEEGGGSCBCC
T ss_pred ccCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCCEEEEEE-------CCCEEEEEEHHHCcCCC
Confidence 345788899999998754432211 111234454555556777777889999876 44577777777776654
Q ss_pred C-CCCCcce------eecccCCCCeEEeeC-CCCeEEEeecCCCeEEEEEeeCceE
Q 015220 180 P-DAGFALF------ESESLKWPGFVEFDD-VNGKVLTYSAQDSIYKVFDLKNYTM 227 (411)
Q Consensus 180 ~-~~~~~LF------~~~~l~~PgfvEFDd-~NGkiLt~~~~ds~ykVWdL~~Ys~ 227 (411)
- ..|.|+= +.+.+.. .+-.++ ..+..|+....++.+|-..+..|..
T Consensus 75 r~a~G~~i~~~i~L~~~e~Iv~--~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~ 128 (323)
T 1wp5_A 75 WKDLGQHIANIIPIDRDEEIIK--AIPINDFELNGYFLFVTRNGMVKKTELKHYKA 128 (323)
T ss_dssp TTSCCEEGGGTSCCCTTCCEEE--EEEESCTTSSCEEEEEETTSEEEEEEGGGGCC
T ss_pred CCCCCcChhhccCCCCCCEEEE--EEEecccCCCceEEEEeCCCeEEEeEHHHhhh
Confidence 3 3454322 2222221 111222 1133355568899999999987754
No 349
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=25.56 E-value=35 Score=30.28 Aligned_cols=17 Identities=29% Similarity=0.327 Sum_probs=16.4
Q ss_pred cCceeeEEEcccceEEE
Q 015220 298 ENENLQILDVRNFELTE 314 (411)
Q Consensus 298 e~~~LkI~dL~t~e~~~ 314 (411)
++++++|||+.+|++++
T Consensus 40 ~~EkV~IvNvnNG~Rfe 56 (139)
T 2c45_A 40 EGEQVTIVDIDNGARLV 56 (139)
T ss_dssp SSCCEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCCceEE
Confidence 78999999999999999
No 350
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=24.17 E-value=52 Score=28.73 Aligned_cols=59 Identities=24% Similarity=0.397 Sum_probs=44.4
Q ss_pred eEEEEeccCceeE-EEEeCCEEEEEEecCCCceeeEEEEecCCcEEeEeeeccccCCccee
Q 015220 226 TMLYSISDKNVQE-IKISPGIMLLIFTKASGHVPLKILSIEDGTVLKSFNHLLHRNKKVDF 285 (411)
Q Consensus 226 s~iysLs~~~Vqe-IkISdG~~Lai~q~t~~~ipiKIl~I~tG~~L~t~~~LL~h~K~I~F 285 (411)
.+++.++-+++.. ..+..|+.+.+..+....+|.+|-.+...+....+||.|.= |.+.|
T Consensus 69 ~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~vD~NHPLAG-k~L~F 128 (158)
T 3cgm_A 69 EGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAG-KDLDF 128 (158)
T ss_dssp GGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEEEECSCTTTT-CCEEE
T ss_pred ceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEEeCCccccC-CEEEE
Confidence 4666676665543 34568888877776667889999999999999999998865 44444
No 351
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=24.13 E-value=5.2e+02 Score=25.35 Aligned_cols=153 Identities=14% Similarity=0.123 Sum_probs=90.4
Q ss_pred CCCCeEEee--CCCCeEEEeec-------------CCCeEEEEEee---CceEEEEec--c---C----------ceeEE
Q 015220 193 KWPGFVEFD--DVNGKVLTYSA-------------QDSIYKVFDLK---NYTMLYSIS--D---K----------NVQEI 239 (411)
Q Consensus 193 ~~PgfvEFD--d~NGkiLt~~~-------------~ds~ykVWdL~---~Ys~iysLs--~---~----------~VqeI 239 (411)
.+|.=+.+| |+.|+.++... .++.+-.+||. +.+.+..+. + + ..++|
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEE
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCcee
Confidence 345667897 77899998422 26789999999 788765543 1 1 47899
Q ss_pred EEe-CCEEEEEEecCCCceeeEEEEec-CCcEEeEeeeccccCC----cceeeeeecce--eEEeecCceeeEEEcccce
Q 015220 240 KIS-PGIMLLIFTKASGHVPLKILSIE-DGTVLKSFNHLLHRNK----KVDFIEQFNEK--LLVKQENENLQILDVRNFE 311 (411)
Q Consensus 240 kIS-dG~~Lai~q~t~~~ipiKIl~I~-tG~~L~t~~~LL~h~K----~I~FLE~~~ek--llIKQe~~~LkI~dL~t~e 311 (411)
.+- +|....+..-.- =+||-+. +|+.+..+.. -.... -..=|+..+++ |++...+++|-..|+.+-.
T Consensus 143 avD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~-~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv 217 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAW-ESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPY 217 (334)
T ss_dssp EECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEE-CCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSS
T ss_pred EECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeee-cCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCc
Confidence 998 777665544321 2366665 4554443321 11111 13357788544 4666577889999988644
Q ss_pred EEEeecc------ccCCCceEEEE-eeceeEEEE--ecCeEEEEecCC
Q 015220 312 LTEVSRT------EFMTPSAFIFL-YENQLFLTF--RNRTVAVWNFRG 350 (411)
Q Consensus 312 ~~~v~~T------~f~hpsAfifL-y~sqlFlSf--sd~tI~iWn~~G 350 (411)
..+|+.. .+..|.+.+.. +..+++|.- .++.+.+-+.+|
T Consensus 218 ~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 218 AWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 4124433 45667776333 333664444 355666666555
No 352
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.38 E-value=5e+02 Score=25.70 Aligned_cols=91 Identities=8% Similarity=0.058 Sum_probs=60.4
Q ss_pred CceeeeEeeehhhhhhCCCCCCCcceeec-ccCCCCeEEeeCCCCeEEEeecCCCeEEEEEeeC--ce---EEEEeccC-
Q 015220 162 FSSLRCRSTRIEYIRRGKPDAGFALFESE-SLKWPGFVEFDDVNGKVLTYSAQDSIYKVFDLKN--YT---MLYSISDK- 234 (411)
Q Consensus 162 ~s~L~cr~~~~~~i~~gk~~~~~~LF~~~-~l~~PgfvEFDd~NGkiLt~~~~ds~ykVWdL~~--Ys---~iysLs~~- 234 (411)
.++-+=.+++.+.|+.+.+.....+...- ......=..+|+.+|.+.....+++.+-.|+-++ |+ .-.-..|+
T Consensus 243 lss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~ 322 (381)
T 3q6k_A 243 GSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSR 322 (381)
T ss_dssp SSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTT
T ss_pred CCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCC
Confidence 46777889999999987764444433332 2233334568889999999999999999999764 41 11222233
Q ss_pred --ceeEEEEe-CCEEEEEEec
Q 015220 235 --NVQEIKIS-PGIMLLIFTK 252 (411)
Q Consensus 235 --~VqeIkIS-dG~~Lai~q~ 252 (411)
-...+++. +|.+.++..+
T Consensus 323 l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 323 FVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CCSEEEEEECTTSCEEEEECS
T ss_pred ccccCeEEECCCCeEEEEECc
Confidence 36778885 7776666654
No 353
>2i7u_A Four-alpha-helix bundle; HOMO dimer, anesthetic binding, de novo protein/ligand binding protein complex; NMR {Synthetic} PDB: 2jst_A
Probab=23.06 E-value=20 Score=27.29 Aligned_cols=7 Identities=100% Similarity=2.053 Sum_probs=3.1
Q ss_pred CCCCCCc
Q 015220 2 EGGGGGG 8 (411)
Q Consensus 2 ~~~~~~~ 8 (411)
|||||||
T Consensus 27 egggggg 33 (62)
T 2i7u_A 27 EGGGGGG 33 (62)
T ss_dssp HCSSCSS
T ss_pred hcCCCCc
Confidence 4444443
No 354
>4es8_A EPF; carbohydrate-binding module, fibronectin-like domain, adhesi extracellular, cell adhesion; 1.58A {Streptococcus pyogenes} PDB: 4es9_A
Probab=22.24 E-value=1.3e+02 Score=28.67 Aligned_cols=54 Identities=24% Similarity=0.372 Sum_probs=34.8
Q ss_pred CceeeEEEcccceEEEeeccccCCCceEEEEeeceeEEEE-ec--------CeEEEEecCCceeeeeccccc
Q 015220 299 NENLQILDVRNFELTEVSRTEFMTPSAFIFLYENQLFLTF-RN--------RTVAVWNFRGELVTSFEDHLL 361 (411)
Q Consensus 299 ~~~LkI~dL~t~e~~~v~~T~f~hpsAfifLy~sqlFlSf-sd--------~tI~iWn~~Gel~~s~e~H~~ 361 (411)
=.+++|+|+-+-.-.- ..+-++...+.=||. +| ..|.+++.+|||+.+.+-...
T Consensus 206 fkn~kiidvtnpsqld---------kgvayvgnknv~ltlksddgrtnfegdeislf~~~g~ll~~i~v~~~ 268 (320)
T 4es8_A 206 FKNLKIIDVTNPSQLD---------KGVAYVGNKNVQLTLKSDDGRTNFEGDEISLFNSRGELLQTVTVTKD 268 (320)
T ss_dssp EEEEEEEECCCCCEEE---------EEECBTTCCEEEEEEECTTCCCCCTTEEEEEECTTCCEEEEEECCTT
T ss_pred ecceeEEecCChHHhc---------cceeeecccceEEEEecCCCcccccCceEEEecCCcceeeEEEeecC
Confidence 3578899987733322 223334444556666 32 369999999999987765555
No 355
>1oh1_A Staphostatin A; cysteine proteinase inhibitor, cysteine protease inhibitor, staphopain inhibitor, NOT similar to cystatins; NMR {Staphylococcus aureus} SCOP: b.61.2.2
Probab=21.06 E-value=88 Score=26.41 Aligned_cols=28 Identities=32% Similarity=0.763 Sum_probs=21.9
Q ss_pred ccccEEE-EEeCCCCceEEEEEeecCCCeEEE
Q 015220 123 ETNQRIC-FLNVTADEVIRSLFYNKNNDSLIT 153 (411)
Q Consensus 123 ~t~~~ic-~lN~s~~evIrsifyN~~n~slI~ 153 (411)
.+-.++| +||-....+ +.||++|.++|+
T Consensus 49 i~p~YiCk~INedsr~i---iL~N~dN~nIiI 77 (109)
T 1oh1_A 49 DDSDYICKYINTEHKQL---TLYNKNNSSIVI 77 (109)
T ss_dssp TTCCEEEEEEETTTTEE---EEEETTTSCEEE
T ss_pred CCchhhhhhhcccceEE---EEecCCCCcEEE
Confidence 4567888 888877655 678999999887
No 356
>3pqi_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 2.64A {Bacteriophage PHI92}
Probab=20.41 E-value=2.2e+02 Score=27.00 Aligned_cols=55 Identities=7% Similarity=0.018 Sum_probs=24.6
Q ss_pred eeEEEEecCeEEEEecCCceee----eeccc-----c---------ccCCCCccceEEEcCCCCEEEEEecCC
Q 015220 333 QLFLTFRNRTVAVWNFRGELVT----SFEDH-----L---------LWHPDCNTNNIYITSDQDLIISYCKAD 387 (411)
Q Consensus 333 qlFlSfsd~tI~iWn~~Gel~~----s~e~H-----~---------~~~~~c~~n~i~Is~Dqd~iiS~~~d~ 387 (411)
+-++.|+++.|..|--.|..-. .+--| . .|..+-....+++|.||+..|+|-++.
T Consensus 86 ~vlvvFsdRdId~~~~~gg~~~~~~~~~R~HdlsDav~ipG~~s~~~~~~~~~~~~~~~~~~g~~~~~~~~dG 158 (247)
T 3pqi_A 86 IGVVVFSERDPSNAFQTDGDTASSGTLIQPCGLYPACFIPKIATATDSSEEVDSEKVIISNNKQTYASFDPNG 158 (247)
T ss_dssp EEEEEEC---------------CCCCCSCCTTTSSCEEEECCCCTTCCTTTSCSSCEEEEETTTEEEEECTTS
T ss_pred EEEEEEecCCHHHHHhcCCCCCCCcccccccCccCeEEEccccccccCCCCCCcceEEEecCCceeEEecCCC
Confidence 4578899999999976653221 22334 1 121212346788899999999995544
No 357
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=20.11 E-value=7.4e+02 Score=25.64 Aligned_cols=197 Identities=11% Similarity=0.058 Sum_probs=108.3
Q ss_pred CCCeEEEeecCC----CeEEEEEeeCce--EEE-E-----eccC--ceeEEEEe-CCEEEEEEecCCC---ceeeEEEEe
Q 015220 203 VNGKVLTYSAQD----SIYKVFDLKNYT--MLY-S-----ISDK--NVQEIKIS-PGIMLLIFTKASG---HVPLKILSI 264 (411)
Q Consensus 203 ~NGkiLt~~~~d----s~ykVWdL~~Ys--~iy-s-----Ls~~--~VqeIkIS-dG~~Lai~q~t~~---~ipiKIl~I 264 (411)
.++++++.++.+ +..-+||..+.+ .+- . +... .-..+.++ +|.+++++-...+ ..-+-++|+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567888888753 455677777654 333 2 1111 34445555 8888888755443 245677888
Q ss_pred cCCcEEeEeeeccccCCcceeeee-ecceeEEeecCc---eeeEEEcccceEEEeecc------ccCCCceEEEEee---
Q 015220 265 EDGTVLKSFNHLLHRNKKVDFIEQ-FNEKLLVKQENE---NLQILDVRNFELTEVSRT------EFMTPSAFIFLYE--- 331 (411)
Q Consensus 265 ~tG~~L~t~~~LL~h~K~I~FLE~-~~ekllIKQe~~---~LkI~dL~t~e~~~v~~T------~f~hpsAfifLy~--- 331 (411)
.+.+=..-. -++...--..... .+++++|--+.. .+-+||..+++-..++.+ .++|.. +++.
T Consensus 476 ~t~~W~~~~--~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a---~v~~~~~ 550 (695)
T 2zwa_A 476 KTREWSMIK--SLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAG---LEFDPVS 550 (695)
T ss_dssp TTTEEEECC--CCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCE---EEEETTT
T ss_pred CCCcEEECC--CCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeE---EEEeCCC
Confidence 876543321 1222222223444 377777763221 799999999998887642 232321 2223
Q ss_pred ceeEEEE-e--c-----CeEEEEecCCce------eeeeccccccCCCCccceEEEcCCCCEEEEEecCCCCCccccCCc
Q 015220 332 NQLFLTF-R--N-----RTVAVWNFRGEL------VTSFEDHLLWHPDCNTNNIYITSDQDLIISYCKADSDDPLAEGNG 397 (411)
Q Consensus 332 sqlFlSf-s--d-----~tI~iWn~~Gel------~~s~e~H~~~~~~c~~n~i~Is~Dqd~iiS~~~d~~~~~~~~~~g 397 (411)
.++|+.+ . + +.+.+||+..+- -+.+... ...+-+.- ++..-.|+.++|-|..+.... .....
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~-p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~--~~~~~ 626 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH-PLFQRYGS-QIKYITPRKLLIVGGTSPSGL--FDRTN 626 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC-GGGCCBSC-EEEEEETTEEEEECCBCSSCC--CCTTT
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC-CCCCcccc-eEEEeCCCEEEEECCccCCCC--CCCCC
Confidence 5688887 3 1 468888988433 2333321 11122222 233344477777776543111 12346
Q ss_pred eEEEeeeccee
Q 015220 398 KLFVSLLMFVT 408 (411)
Q Consensus 398 tI~i~~i~tGk 408 (411)
.|-++|+.|++
T Consensus 627 ~v~~yd~~t~~ 637 (695)
T 2zwa_A 627 SIISLDPLSET 637 (695)
T ss_dssp SEEEEETTTTE
T ss_pred eEEEEECCCCe
Confidence 78888888765
Done!