Query 015222
Match_columns 411
No_of_seqs 477 out of 2548
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 04:15:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015222.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015222hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615 Serine/threonine prote 100.0 5E-59 1.1E-63 426.5 14.1 265 88-387 168-447 (475)
2 KOG0671 LAMMER dual specificit 100.0 2.9E-57 6.4E-62 411.7 19.3 308 66-384 63-413 (415)
3 KOG0575 Polo-like serine/threo 100.0 9E-57 1.9E-61 430.9 21.5 249 92-382 18-274 (592)
4 KOG0581 Mitogen-activated prot 100.0 6.6E-56 1.4E-60 403.0 20.6 259 92-388 79-346 (364)
5 KOG0598 Ribosomal protein S6 k 100.0 9.3E-56 2E-60 402.0 18.1 260 92-392 25-296 (357)
6 KOG0667 Dual-specificity tyros 100.0 8.8E-55 1.9E-59 421.5 25.7 285 75-388 169-513 (586)
7 KOG0592 3-phosphoinositide-dep 100.0 1.6E-54 3.4E-59 409.2 21.5 272 91-387 72-348 (604)
8 KOG0616 cAMP-dependent protein 100.0 1.8E-54 3.8E-59 381.3 16.5 260 92-389 44-309 (355)
9 KOG0595 Serine/threonine-prote 100.0 2.1E-53 4.6E-58 389.9 20.7 261 91-384 9-275 (429)
10 KOG0605 NDR and related serine 100.0 1.3E-53 2.8E-58 403.2 18.5 287 91-388 140-456 (550)
11 KOG0593 Predicted protein kina 100.0 1.1E-53 2.3E-58 377.2 14.8 256 92-384 2-291 (396)
12 KOG0600 Cdc2-related protein k 100.0 9.1E-53 2E-57 394.2 18.0 276 89-403 114-424 (560)
13 KOG0661 MAPK related serine/th 100.0 3E-53 6.5E-58 394.8 11.2 259 90-385 8-299 (538)
14 KOG0583 Serine/threonine prote 100.0 1.7E-51 3.7E-56 394.6 22.0 254 89-382 14-280 (370)
15 KOG0591 NIMA (never in mitosis 100.0 4.6E-53 1E-57 369.7 7.7 252 91-376 18-284 (375)
16 PTZ00284 protein kinase; Provi 100.0 1.3E-49 2.9E-54 398.1 33.3 289 80-385 114-446 (467)
17 KOG0659 Cdk activating kinase 100.0 2.5E-51 5.5E-56 356.3 17.7 259 92-387 2-291 (318)
18 KOG0610 Putative serine/threon 100.0 4.1E-51 8.8E-56 375.0 20.0 288 92-386 77-401 (459)
19 KOG0694 Serine/threonine prote 100.0 1.4E-50 3E-55 392.6 22.8 258 91-390 367-637 (694)
20 KOG0660 Mitogen-activated prot 100.0 5.7E-51 1.2E-55 369.4 16.9 272 88-397 18-330 (359)
21 KOG0588 Serine/threonine prote 100.0 6.2E-51 1.3E-55 392.4 17.4 254 92-387 12-273 (786)
22 KOG0033 Ca2+/calmodulin-depend 100.0 1.2E-52 2.7E-57 360.3 3.8 281 89-404 8-300 (355)
23 KOG0597 Serine-threonine prote 100.0 7.9E-51 1.7E-55 384.7 12.4 253 92-386 2-260 (808)
24 KOG0032 Ca2+/calmodulin-depend 100.0 2.3E-49 4.9E-54 379.7 22.7 266 87-387 30-303 (382)
25 KOG0663 Protein kinase PITSLRE 100.0 4.3E-50 9.4E-55 358.7 15.5 258 91-385 75-369 (419)
26 KOG0582 Ste20-like serine/thre 100.0 5.9E-49 1.3E-53 363.6 22.7 267 91-386 25-302 (516)
27 cd05612 STKc_PRKX_like Catalyt 100.0 3.5E-49 7.6E-54 371.4 20.1 253 92-386 1-263 (291)
28 KOG0198 MEKK and related serin 100.0 8E-50 1.7E-54 368.9 14.4 255 92-385 17-284 (313)
29 cd05628 STKc_NDR1 Catalytic do 100.0 9E-49 2E-53 380.0 22.1 285 92-388 1-304 (363)
30 KOG0578 p21-activated serine/t 100.0 7.1E-50 1.5E-54 380.5 13.4 255 91-385 272-531 (550)
31 PTZ00263 protein kinase A cata 100.0 9.7E-49 2.1E-53 374.8 20.9 253 92-386 18-280 (329)
32 KOG0585 Ca2+/calmodulin-depend 100.0 7.6E-49 1.6E-53 365.0 19.2 254 89-383 94-378 (576)
33 KOG0580 Serine/threonine prote 100.0 6.1E-50 1.3E-54 342.9 10.5 252 91-382 21-278 (281)
34 cd05631 STKc_GRK4 Catalytic do 100.0 2E-48 4.4E-53 365.1 20.3 264 94-393 2-277 (285)
35 KOG1290 Serine/threonine prote 100.0 6.2E-47 1.3E-51 353.2 29.3 308 75-386 60-559 (590)
36 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-47 2.6E-52 360.5 23.9 252 92-380 5-288 (288)
37 PTZ00426 cAMP-dependent protei 100.0 6.4E-48 1.4E-52 370.3 21.0 259 91-387 29-294 (340)
38 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 6.2E-48 1.3E-52 369.9 20.9 256 92-385 1-265 (333)
39 KOG0594 Protein kinase PCTAIRE 100.0 3.8E-48 8.1E-53 352.0 17.3 260 92-387 11-312 (323)
40 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-48 1.4E-52 374.2 19.4 283 92-386 1-305 (364)
41 KOG0599 Phosphorylase kinase g 100.0 4.1E-49 8.8E-54 343.6 9.7 259 91-386 16-292 (411)
42 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.3E-47 7.1E-52 360.0 23.6 257 92-385 5-296 (303)
43 cd07848 STKc_CDKL5 Catalytic d 100.0 3.6E-47 7.8E-52 356.7 23.6 252 92-380 1-287 (287)
44 KOG0611 Predicted serine/threo 100.0 1.1E-48 2.5E-53 357.1 12.8 250 89-381 50-307 (668)
45 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-47 2.5E-52 366.5 19.8 249 98-388 1-262 (323)
46 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5E-47 1.1E-51 364.1 24.0 261 93-391 1-304 (338)
47 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-47 3.5E-52 373.6 20.9 286 93-387 2-315 (381)
48 PLN00034 mitogen-activated pro 100.0 4.4E-47 9.6E-52 366.9 23.5 252 92-385 74-336 (353)
49 cd05629 STKc_NDR_like_fungal C 100.0 1.9E-47 4.1E-52 372.7 19.4 283 92-385 1-313 (377)
50 KOG0658 Glycogen synthase kina 100.0 4.6E-48 1E-52 351.0 14.0 256 93-386 25-315 (364)
51 cd05625 STKc_LATS1 Catalytic d 100.0 2.9E-47 6.3E-52 372.0 20.5 282 93-387 2-315 (382)
52 cd05598 STKc_LATS Catalytic do 100.0 1.5E-47 3.4E-52 373.2 18.3 283 92-387 1-311 (376)
53 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.9E-47 4E-52 369.0 18.0 281 92-386 1-294 (350)
54 PHA03212 serine/threonine kina 100.0 9.7E-47 2.1E-51 368.3 23.2 257 91-390 91-389 (391)
55 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-46 8.3E-51 361.1 25.9 262 81-382 7-320 (359)
56 KOG0604 MAP kinase-activated p 100.0 2.4E-47 5.1E-52 336.5 15.7 267 90-392 59-337 (400)
57 cd05596 STKc_ROCK Catalytic do 100.0 6.4E-47 1.4E-51 367.7 20.1 256 91-385 42-312 (370)
58 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-46 3.6E-51 358.6 22.5 252 93-385 1-265 (324)
59 cd07862 STKc_CDK6 Catalytic do 100.0 3.4E-46 7.4E-51 350.6 23.8 256 92-380 1-290 (290)
60 KOG0201 Serine/threonine prote 100.0 4E-49 8.6E-54 364.4 3.3 252 92-384 13-270 (467)
61 cd05627 STKc_NDR2 Catalytic do 100.0 6.9E-47 1.5E-51 366.5 18.6 282 92-387 1-303 (360)
62 cd05621 STKc_ROCK2 Catalytic d 100.0 1.2E-46 2.7E-51 365.4 20.2 257 91-384 42-311 (370)
63 cd05595 STKc_PKB_beta Catalyti 100.0 2.4E-46 5.1E-51 357.3 21.7 247 98-386 1-260 (323)
64 KOG4717 Serine/threonine prote 100.0 5.5E-47 1.2E-51 355.1 16.7 260 89-388 15-281 (864)
65 cd05585 STKc_YPK1_like Catalyt 100.0 2E-46 4.4E-51 356.2 20.5 244 100-385 1-255 (312)
66 cd05593 STKc_PKB_gamma Catalyt 100.0 2E-46 4.3E-51 358.6 20.4 247 98-386 1-260 (328)
67 cd05605 STKc_GRK4_like Catalyt 100.0 2.9E-46 6.3E-51 350.5 21.0 263 93-391 1-275 (285)
68 cd05601 STKc_CRIK Catalytic do 100.0 8.7E-47 1.9E-51 361.5 17.3 256 92-387 1-273 (330)
69 PTZ00036 glycogen synthase kin 100.0 7.1E-46 1.5E-50 367.7 23.6 259 89-385 63-359 (440)
70 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-45 2.6E-50 350.3 24.2 256 92-384 6-293 (309)
71 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5E-46 1.1E-50 358.1 21.7 259 90-387 13-308 (343)
72 cd05589 STKc_PKN Catalytic dom 100.0 5.7E-46 1.2E-50 354.9 21.9 258 94-387 1-267 (324)
73 cd05590 STKc_nPKC_eta Catalyti 100.0 3.5E-46 7.6E-51 355.7 20.2 247 98-386 1-262 (320)
74 cd05614 STKc_MSK2_N N-terminal 100.0 3E-46 6.6E-51 358.0 19.5 251 93-385 1-275 (332)
75 cd07875 STKc_JNK1 Catalytic do 100.0 2.8E-45 6E-50 355.8 26.1 253 90-382 22-323 (364)
76 cd05575 STKc_SGK Catalytic dom 100.0 4.1E-46 8.9E-51 355.7 19.8 250 98-385 1-259 (323)
77 cd05616 STKc_cPKC_beta Catalyt 100.0 9.5E-46 2E-50 353.3 22.2 254 93-387 1-267 (323)
78 cd05622 STKc_ROCK1 Catalytic d 100.0 5.7E-46 1.2E-50 361.0 20.7 258 91-385 42-312 (371)
79 cd05620 STKc_nPKC_delta Cataly 100.0 6.8E-46 1.5E-50 353.1 20.7 247 98-386 1-257 (316)
80 cd07874 STKc_JNK3 Catalytic do 100.0 2E-45 4.3E-50 355.6 24.2 263 81-383 3-317 (355)
81 KOG0192 Tyrosine kinase specif 100.0 5.8E-46 1.2E-50 353.3 19.7 246 93-378 42-300 (362)
82 cd05591 STKc_nPKC_epsilon Cata 100.0 6.5E-46 1.4E-50 354.1 20.1 248 98-387 1-264 (321)
83 cd05594 STKc_PKB_alpha Catalyt 100.0 3.3E-46 7.2E-51 356.7 17.7 247 98-386 1-261 (325)
84 cd07863 STKc_CDK4 Catalytic do 100.0 2.4E-45 5.3E-50 344.4 23.2 255 93-380 1-288 (288)
85 cd05604 STKc_SGK3 Catalytic do 100.0 6.8E-46 1.5E-50 354.6 19.2 250 98-385 1-259 (325)
86 cd06649 PKc_MEK2 Catalytic dom 100.0 2.9E-45 6.4E-50 351.0 23.2 257 91-385 4-309 (331)
87 cd05592 STKc_nPKC_theta_delta 100.0 2.1E-45 4.5E-50 349.8 21.1 247 98-386 1-257 (316)
88 cd05619 STKc_nPKC_theta Cataly 100.0 2.1E-45 4.6E-50 349.7 21.1 247 98-386 1-257 (316)
89 cd05608 STKc_GRK1 Catalytic do 100.0 2E-45 4.4E-50 343.9 20.6 252 100-387 1-267 (280)
90 KOG0986 G protein-coupled rece 100.0 3.5E-47 7.6E-52 351.9 8.5 283 91-405 184-475 (591)
91 cd05615 STKc_cPKC_alpha Cataly 100.0 3E-45 6.6E-50 349.7 22.0 257 93-386 1-266 (323)
92 cd05597 STKc_DMPK_like Catalyt 100.0 2.8E-45 6E-50 351.1 21.6 258 92-385 1-274 (331)
93 cd05584 STKc_p70S6K Catalytic 100.0 2.8E-45 6E-50 350.0 20.8 247 97-385 1-264 (323)
94 cd05588 STKc_aPKC Catalytic do 100.0 1.6E-45 3.5E-50 352.5 19.1 247 98-386 1-271 (329)
95 cd07853 STKc_NLK Catalytic dom 100.0 4.4E-45 9.6E-50 355.4 22.4 254 93-384 1-295 (372)
96 cd05570 STKc_PKC Catalytic dom 100.0 3E-45 6.6E-50 349.0 20.2 246 98-385 1-260 (318)
97 cd05602 STKc_SGK1 Catalytic do 100.0 3.7E-45 8.1E-50 349.5 20.4 250 98-385 1-259 (325)
98 cd05630 STKc_GRK6 Catalytic do 100.0 4.8E-45 1E-49 342.3 20.6 258 93-386 1-270 (285)
99 KOG0589 Serine/threonine prote 100.0 2.9E-46 6.3E-51 353.7 12.3 250 92-381 4-262 (426)
100 cd05624 STKc_MRCK_beta Catalyt 100.0 3.5E-45 7.5E-50 350.5 19.6 259 92-386 1-275 (331)
101 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-45 3E-50 353.2 16.7 252 100-385 1-261 (330)
102 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.6E-44 3.5E-49 341.2 23.7 256 92-384 6-293 (301)
103 cd05603 STKc_SGK2 Catalytic do 100.0 5.3E-45 1.1E-49 347.8 20.5 251 98-386 1-260 (321)
104 PHA03211 serine/threonine kina 100.0 3.7E-44 8E-49 354.9 27.0 250 91-382 168-460 (461)
105 cd05618 STKc_aPKC_iota Catalyt 100.0 3.4E-45 7.3E-50 350.2 18.9 246 98-385 1-270 (329)
106 KOG0670 U4/U6-associated splic 100.0 1.1E-45 2.4E-50 346.7 15.1 279 74-382 414-751 (752)
107 KOG0197 Tyrosine kinases [Sign 100.0 5E-46 1.1E-50 353.3 12.7 244 93-376 207-456 (468)
108 cd05623 STKc_MRCK_alpha Cataly 100.0 6.4E-45 1.4E-49 348.8 20.4 259 92-386 1-275 (332)
109 cd05632 STKc_GRK5 Catalytic do 100.0 2.5E-44 5.5E-49 337.4 22.6 259 93-387 1-271 (285)
110 cd05582 STKc_RSK_N N-terminal 100.0 2.6E-45 5.6E-50 349.5 16.0 247 98-386 2-263 (318)
111 KOG4236 Serine/threonine prote 100.0 2.7E-46 5.8E-51 351.2 9.0 262 92-388 562-830 (888)
112 PHA03209 serine/threonine kina 100.0 1.6E-44 3.5E-49 349.4 21.6 250 92-383 66-357 (357)
113 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-44 4.1E-49 345.6 21.8 256 91-384 4-306 (333)
114 cd05617 STKc_aPKC_zeta Catalyt 100.0 9E-45 2E-49 347.0 19.3 248 98-387 1-270 (327)
115 cd07868 STKc_CDK8 Catalytic do 100.0 5.5E-44 1.2E-48 340.1 23.0 251 97-380 6-317 (317)
116 PHA03207 serine/threonine kina 100.0 9.6E-44 2.1E-48 348.1 25.2 257 87-385 87-383 (392)
117 cd05607 STKc_GRK7 Catalytic do 100.0 4.6E-44 9.9E-49 334.2 21.8 256 100-387 1-264 (277)
118 KOG0607 MAP kinase-interacting 100.0 6.7E-45 1.4E-49 323.5 14.6 266 92-391 77-375 (463)
119 KOG0574 STE20-like serine/thre 100.0 5.1E-47 1.1E-51 334.5 1.0 255 93-386 34-292 (502)
120 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-43 2.4E-48 333.7 23.4 255 92-388 1-265 (290)
121 cd07850 STKc_JNK Catalytic dom 100.0 1.6E-43 3.5E-48 342.0 24.6 262 81-382 2-316 (353)
122 PF00069 Pkinase: Protein kina 100.0 2.9E-44 6.4E-49 331.5 17.9 249 94-380 1-260 (260)
123 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-43 4.6E-48 330.6 23.3 252 93-380 1-285 (285)
124 KOG0690 Serine/threonine prote 100.0 9.9E-46 2.1E-50 329.5 6.6 262 91-394 167-441 (516)
125 cd05574 STKc_phototropin_like 100.0 1.5E-43 3.3E-48 336.9 22.1 289 92-387 1-299 (316)
126 PTZ00283 serine/threonine prot 100.0 9.5E-44 2E-48 356.8 21.5 254 90-382 30-302 (496)
127 cd07839 STKc_CDK5 Catalytic do 100.0 1.6E-43 3.5E-48 331.3 21.4 251 93-380 1-284 (284)
128 PHA03210 serine/threonine kina 100.0 9.6E-44 2.1E-48 357.7 21.2 265 84-384 140-461 (501)
129 PTZ00267 NIMA-related protein 100.0 1.9E-43 4.1E-48 354.2 22.8 252 92-382 67-328 (478)
130 KOG0579 Ste20-like serine/thre 100.0 1.8E-45 3.9E-50 351.9 6.6 257 92-386 32-298 (1187)
131 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.4E-43 5.1E-48 338.8 20.8 249 91-377 6-330 (338)
132 cd06637 STKc_TNIK Catalytic do 100.0 2.4E-43 5.2E-48 328.0 19.8 252 91-380 5-272 (272)
133 KOG0577 Serine/threonine prote 100.0 6E-45 1.3E-49 346.1 8.3 254 92-385 26-286 (948)
134 cd06625 STKc_MEKK3_like Cataly 100.0 7.8E-43 1.7E-47 322.8 22.2 249 92-380 2-263 (263)
135 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-42 3.4E-47 319.3 23.8 249 93-380 1-256 (256)
136 cd06615 PKc_MEK Catalytic doma 100.0 7.8E-43 1.7E-47 330.9 22.1 257 92-386 1-296 (308)
137 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-42 3.2E-47 324.9 23.5 251 92-380 1-286 (286)
138 cd07845 STKc_CDK10 Catalytic d 100.0 1.1E-42 2.5E-47 329.9 23.0 260 91-387 6-300 (309)
139 cd07860 STKc_CDK2_3 Catalytic 100.0 1.5E-42 3.2E-47 324.9 23.3 252 93-380 1-284 (284)
140 PTZ00266 NIMA-related protein 100.0 8E-43 1.7E-47 362.2 23.5 280 85-386 6-304 (1021)
141 cd08227 PK_STRAD_alpha Pseudok 100.0 2.9E-43 6.3E-48 336.7 18.7 260 96-384 2-314 (327)
142 cd08223 STKc_Nek4 Catalytic do 100.0 2.5E-42 5.3E-47 318.4 24.2 249 93-380 1-257 (257)
143 cd07832 STKc_CCRK Catalytic do 100.0 2E-42 4.3E-47 324.0 23.8 252 93-381 1-286 (286)
144 cd07849 STKc_ERK1_2_like Catal 100.0 1.3E-42 2.7E-47 333.5 22.8 262 90-390 3-305 (336)
145 KOG0612 Rho-associated, coiled 100.0 1E-44 2.3E-49 366.7 8.4 255 91-386 74-347 (1317)
146 cd06619 PKc_MKK5 Catalytic dom 100.0 7.5E-43 1.6E-47 326.3 20.0 254 92-387 1-263 (279)
147 cd07867 STKc_CDC2L6 Catalytic 100.0 2.1E-42 4.5E-47 329.1 23.2 250 98-380 7-317 (317)
148 cd06654 STKc_PAK1 Catalytic do 100.0 2.1E-42 4.5E-47 326.2 22.9 255 91-385 19-278 (296)
149 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-42 3.3E-47 333.1 22.3 265 90-392 3-306 (337)
150 cd06655 STKc_PAK2 Catalytic do 100.0 2E-42 4.4E-47 326.2 22.4 255 92-386 19-278 (296)
151 cd06644 STKc_STK10_LOK Catalyt 100.0 1.8E-42 3.9E-47 325.8 21.9 258 91-386 11-278 (292)
152 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.4E-43 1.4E-47 327.7 18.7 259 92-386 1-271 (286)
153 KOG0696 Serine/threonine prote 100.0 1.4E-43 3.1E-48 324.4 13.7 260 92-388 349-617 (683)
154 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-42 2.5E-47 333.5 20.7 265 91-393 4-310 (334)
155 cd05611 STKc_Rim15_like Cataly 100.0 2.5E-42 5.3E-47 319.2 22.0 249 98-385 2-259 (260)
156 cd05609 STKc_MAST Catalytic do 100.0 3.9E-42 8.6E-47 325.6 23.9 273 92-386 1-282 (305)
157 cd07865 STKc_CDK9 Catalytic do 100.0 3.1E-42 6.6E-47 326.6 23.2 252 92-380 12-310 (310)
158 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-42 2.6E-47 328.0 20.2 258 91-388 18-280 (297)
159 cd07844 STKc_PCTAIRE_like Cata 100.0 3.9E-42 8.5E-47 323.2 23.5 252 92-380 5-291 (291)
160 cd07841 STKc_CDK7 Catalytic do 100.0 3.4E-42 7.5E-47 324.7 22.8 258 93-387 1-292 (298)
161 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.9E-42 4.1E-47 323.9 20.9 252 91-380 15-282 (282)
162 PLN00009 cyclin-dependent kina 100.0 3.8E-42 8.2E-47 323.9 22.9 259 92-385 2-292 (294)
163 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 8.5E-42 1.8E-46 326.6 25.5 268 90-396 8-307 (328)
164 cd07870 STKc_PFTAIRE2 Catalyti 100.0 8.8E-42 1.9E-46 320.9 25.1 252 92-380 5-291 (291)
165 KOG0586 Serine/threonine prote 100.0 3.6E-43 7.9E-48 337.5 15.9 255 90-386 54-315 (596)
166 cd07851 STKc_p38 Catalytic dom 100.0 2.5E-42 5.4E-47 332.4 21.8 263 89-390 12-311 (343)
167 cd07837 STKc_CdkB_plant Cataly 100.0 4.9E-42 1.1E-46 323.1 23.4 254 92-381 1-295 (295)
168 KOG0193 Serine/threonine prote 100.0 9.9E-43 2.2E-47 333.0 18.7 264 89-393 389-670 (678)
169 cd07877 STKc_p38alpha_MAPK14 C 100.0 6.7E-42 1.4E-46 329.6 24.6 264 89-391 14-314 (345)
170 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-42 3.8E-47 323.4 19.8 256 100-387 1-264 (277)
171 cd06645 STKc_MAP4K3 Catalytic 100.0 9.2E-43 2E-47 323.3 17.5 250 92-379 9-267 (267)
172 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.8E-42 1.3E-46 329.8 23.6 261 90-389 13-310 (343)
173 cd06646 STKc_MAP4K5 Catalytic 100.0 1.4E-42 3.1E-47 322.0 18.6 251 91-379 8-267 (267)
174 cd05633 STKc_GRK3 Catalytic do 100.0 4.5E-42 9.7E-47 321.1 22.1 253 99-387 1-265 (279)
175 cd06609 STKc_MST3_like Catalyt 100.0 2.4E-42 5.1E-47 321.8 20.0 253 92-386 1-260 (274)
176 cd08221 STKc_Nek9 Catalytic do 100.0 8.8E-42 1.9E-46 314.6 23.6 249 93-380 1-256 (256)
177 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-42 2.8E-47 324.7 18.2 255 92-384 5-269 (280)
178 cd06638 STKc_myosinIIIA Cataly 100.0 6.8E-42 1.5E-46 320.7 22.8 256 88-380 14-286 (286)
179 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.4E-42 7.4E-47 319.4 20.5 247 93-380 1-267 (267)
180 cd07831 STKc_MOK Catalytic dom 100.0 1E-41 2.2E-46 318.6 23.6 249 94-380 1-282 (282)
181 cd06612 STKc_MST1_2 Catalytic 100.0 3.4E-42 7.4E-47 317.1 20.0 250 92-380 3-256 (256)
182 cd06643 STKc_SLK Catalytic dom 100.0 3.7E-42 8.1E-47 321.9 20.5 254 93-384 6-269 (282)
183 KOG0662 Cyclin-dependent kinas 100.0 8.2E-43 1.8E-47 287.0 13.9 255 93-384 3-290 (292)
184 PHA02988 hypothetical protein; 100.0 3.4E-42 7.3E-47 322.6 20.0 238 98-377 26-275 (283)
185 cd08218 STKc_Nek1 Catalytic do 100.0 9.2E-42 2E-46 314.5 22.6 249 93-380 1-256 (256)
186 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-41 3E-46 314.2 23.8 251 92-379 3-262 (262)
187 cd07833 STKc_CDKL Catalytic do 100.0 1E-41 2.2E-46 319.6 23.1 252 92-380 1-288 (288)
188 KOG1989 ARK protein kinase fam 100.0 1.8E-42 4E-47 345.8 19.0 251 82-377 30-307 (738)
189 cd06608 STKc_myosinIII_like Ca 100.0 6.1E-42 1.3E-46 318.5 21.2 253 91-380 5-275 (275)
190 cd07843 STKc_CDC2L1 Catalytic 100.0 7E-42 1.5E-46 321.9 21.8 252 92-380 5-293 (293)
191 cd05096 PTKc_DDR1 Catalytic do 100.0 7.7E-42 1.7E-46 323.4 21.9 251 91-377 4-301 (304)
192 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-41 3.5E-46 317.7 23.8 252 93-380 1-284 (284)
193 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-41 3.5E-46 319.1 23.8 255 90-381 20-291 (291)
194 cd07846 STKc_CDKL2_3 Catalytic 100.0 9E-42 2E-46 319.7 22.0 251 92-380 1-286 (286)
195 cd06610 STKc_OSR1_SPAK Catalyt 100.0 7.9E-42 1.7E-46 316.5 21.3 253 92-380 1-267 (267)
196 cd06631 STKc_YSK4 Catalytic do 100.0 6.6E-42 1.4E-46 317.2 20.8 257 93-380 1-265 (265)
197 cd07834 STKc_MAPK Catalytic do 100.0 5E-42 1.1E-46 328.5 20.6 259 93-389 1-301 (330)
198 cd05052 PTKc_Abl Catalytic dom 100.0 7.4E-42 1.6E-46 316.7 20.4 247 92-377 6-258 (263)
199 KOG4721 Serine/threonine prote 100.0 7.5E-44 1.6E-48 337.4 7.0 243 97-387 129-374 (904)
200 cd06652 STKc_MEKK2 Catalytic d 100.0 1.9E-41 4.1E-46 314.2 22.9 249 92-381 2-265 (265)
201 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-41 3.3E-46 317.8 22.4 251 94-380 1-283 (283)
202 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.7E-42 1.5E-46 317.6 19.7 247 91-377 4-261 (266)
203 cd07879 STKc_p38delta_MAPK13 C 100.0 1.5E-41 3.3E-46 326.8 22.8 258 90-387 13-307 (342)
204 cd06651 STKc_MEKK3 Catalytic d 100.0 1.8E-41 4E-46 314.6 22.4 248 93-381 3-265 (266)
205 cd06629 STKc_MAPKKK_Bck1_like 100.0 1E-41 2.3E-46 317.1 20.7 250 93-380 2-272 (272)
206 cd05572 STKc_cGK_PKG Catalytic 100.0 1.1E-41 2.4E-46 315.1 20.4 244 100-385 1-260 (262)
207 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-41 5.6E-46 311.2 22.8 250 93-380 1-256 (256)
208 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-41 2.4E-46 314.9 20.4 254 93-384 2-263 (264)
209 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-41 2.5E-46 315.8 20.4 252 93-381 1-268 (268)
210 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.6E-41 3.5E-46 326.6 22.1 265 90-392 3-315 (342)
211 KOG4279 Serine/threonine prote 100.0 7.9E-43 1.7E-47 336.8 12.8 251 99-386 582-841 (1226)
212 cd05578 STKc_Yank1 Catalytic d 100.0 6.3E-42 1.4E-46 316.1 18.3 246 93-380 1-258 (258)
213 cd05106 PTKc_CSF-1R Catalytic 100.0 7.1E-42 1.5E-46 332.7 19.6 248 92-377 38-368 (374)
214 PTZ00024 cyclin-dependent prot 100.0 1.5E-41 3.2E-46 325.9 21.3 276 90-386 6-322 (335)
215 cd08219 STKc_Nek3 Catalytic do 100.0 1.9E-41 4.2E-46 312.3 21.2 247 93-378 1-253 (255)
216 cd06658 STKc_PAK5 Catalytic do 100.0 4.5E-42 9.7E-47 323.3 17.3 256 92-387 22-282 (292)
217 cd07842 STKc_CDK8_like Catalyt 100.0 2.6E-41 5.7E-46 321.1 22.5 256 93-380 1-316 (316)
218 cd06607 STKc_TAO Catalytic dom 100.0 2.6E-41 5.7E-46 320.3 22.3 257 90-386 13-276 (307)
219 cd06626 STKc_MEKK4 Catalytic d 100.0 3.3E-41 7.1E-46 312.0 22.4 248 93-380 1-264 (264)
220 cd06640 STKc_MST4 Catalytic do 100.0 1.3E-41 2.9E-46 317.5 19.9 253 92-386 4-262 (277)
221 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.7E-41 5.9E-46 316.0 21.8 256 92-385 1-269 (283)
222 cd05104 PTKc_Kit Catalytic dom 100.0 1.6E-41 3.4E-46 330.5 20.6 248 92-378 35-371 (375)
223 cd05072 PTKc_Lyn Catalytic dom 100.0 1.7E-41 3.6E-46 313.7 19.6 246 92-377 6-257 (261)
224 cd05048 PTKc_Ror Catalytic Dom 100.0 1.4E-41 3.1E-46 318.0 19.3 248 92-378 5-280 (283)
225 cd08228 STKc_Nek6 Catalytic do 100.0 4.8E-41 1E-45 311.6 22.0 249 92-378 2-262 (267)
226 cd07857 STKc_MPK1 Catalytic do 100.0 7E-41 1.5E-45 320.9 23.8 264 93-394 1-309 (332)
227 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-41 3.1E-46 318.4 18.6 255 92-384 5-273 (284)
228 KOG0666 Cyclin C-dependent kin 100.0 2.3E-42 5E-47 306.4 12.1 264 92-387 24-347 (438)
229 cd07840 STKc_CDK9_like Catalyt 100.0 6.7E-41 1.5E-45 313.6 22.8 250 94-380 1-287 (287)
230 cd06605 PKc_MAPKK Catalytic do 100.0 9.4E-42 2E-46 315.9 16.8 254 92-382 1-262 (265)
231 cd05610 STKc_MASTL Catalytic d 100.0 4E-41 8.7E-46 348.9 23.4 144 92-242 4-152 (669)
232 PHA03390 pk1 serine/threonine- 100.0 4.7E-41 1E-45 312.2 21.4 250 91-382 13-267 (267)
233 cd07852 STKc_MAPK15 Catalytic 100.0 4.1E-41 8.9E-46 323.1 21.7 268 88-394 3-312 (337)
234 cd06648 STKc_PAK_II Catalytic 100.0 5.2E-41 1.1E-45 314.9 21.8 255 93-387 20-279 (285)
235 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.6E-41 1.2E-45 309.4 21.6 245 92-377 4-254 (256)
236 KOG2345 Serine/threonine prote 100.0 1.1E-42 2.3E-47 299.7 9.1 249 91-377 20-296 (302)
237 KOG0983 Mitogen-activated prot 100.0 5.3E-42 1.2E-46 299.2 13.5 256 92-385 92-357 (391)
238 cd07864 STKc_CDK12 Catalytic d 100.0 5.2E-41 1.1E-45 317.2 21.5 256 88-380 3-302 (302)
239 cd05049 PTKc_Trk Catalytic dom 100.0 1.8E-41 4E-46 316.6 18.2 247 92-377 5-277 (280)
240 cd05606 STKc_beta_ARK Catalyti 100.0 7.2E-41 1.6E-45 312.8 22.2 253 99-387 1-265 (278)
241 cd06632 STKc_MEKK1_plant Catal 100.0 4.7E-41 1E-45 309.7 20.5 248 93-380 1-258 (258)
242 cd08217 STKc_Nek2 Catalytic do 100.0 1E-40 2.3E-45 308.3 22.7 249 93-380 1-265 (265)
243 cd06647 STKc_PAK_I Catalytic d 100.0 3.2E-41 7E-46 317.6 19.4 261 91-391 18-283 (293)
244 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-41 6.3E-46 312.0 18.8 246 100-385 1-265 (265)
245 cd05581 STKc_PDK1 Catalytic do 100.0 6E-41 1.3E-45 312.8 21.0 270 92-380 1-280 (280)
246 cd05061 PTKc_InsR Catalytic do 100.0 9.8E-41 2.1E-45 313.4 22.5 255 91-385 5-288 (288)
247 cd08225 STKc_Nek5 Catalytic do 100.0 5.8E-41 1.3E-45 309.1 20.3 250 93-380 1-257 (257)
248 PRK13184 pknD serine/threonine 100.0 5.8E-41 1.3E-45 347.0 22.6 262 92-365 2-277 (932)
249 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.2E-41 1.3E-45 312.9 20.7 252 91-378 5-275 (277)
250 cd05071 PTKc_Src Catalytic dom 100.0 6.7E-41 1.4E-45 310.2 20.7 246 91-377 5-256 (262)
251 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.3E-40 2.8E-45 312.4 22.8 259 92-386 1-275 (287)
252 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-40 2.4E-45 308.3 22.0 247 91-377 5-257 (261)
253 cd05118 STKc_CMGC Catalytic do 100.0 7.4E-41 1.6E-45 312.8 21.0 250 94-380 1-283 (283)
254 KOG0614 cGMP-dependent protein 100.0 3.4E-43 7.3E-48 329.2 5.1 260 92-391 420-691 (732)
255 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-40 2.6E-45 315.8 22.6 267 91-380 7-311 (311)
256 cd06659 STKc_PAK6 Catalytic do 100.0 2.5E-41 5.4E-46 318.9 17.7 253 94-386 23-280 (297)
257 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.1E-41 1.8E-45 309.1 20.6 247 90-377 4-256 (260)
258 cd07838 STKc_CDK4_6_like Catal 100.0 3E-40 6.5E-45 309.3 24.6 254 94-380 1-287 (287)
259 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6E-41 1.3E-45 310.0 19.5 247 90-377 4-256 (260)
260 cd06917 STKc_NAK1_like Catalyt 100.0 5.1E-41 1.1E-45 313.3 19.2 253 93-384 2-262 (277)
261 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8.5E-41 1.8E-45 308.5 20.2 246 92-378 4-255 (256)
262 cd08226 PK_STRAD_beta Pseudoki 100.0 3.6E-41 7.8E-46 322.3 18.1 263 98-386 4-317 (328)
263 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.3E-42 2E-46 318.4 13.6 251 92-384 4-260 (277)
264 cd05084 PTKc_Fes Catalytic dom 100.0 9E-41 2E-45 307.2 20.0 240 98-377 1-249 (252)
265 cd07830 STKc_MAK_like Catalyti 100.0 2.3E-40 5.1E-45 309.7 23.1 251 94-380 1-283 (283)
266 cd05082 PTKc_Csk Catalytic dom 100.0 1.1E-40 2.4E-45 307.5 20.0 244 92-377 6-252 (256)
267 cd06624 STKc_ASK Catalytic dom 100.0 2.1E-40 4.6E-45 307.7 22.0 248 96-380 12-268 (268)
268 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-40 2.4E-45 312.1 20.2 248 92-378 5-280 (283)
269 cd05088 PTKc_Tie2 Catalytic do 100.0 1E-40 2.2E-45 315.6 20.1 248 92-378 7-277 (303)
270 cd05069 PTKc_Yes Catalytic dom 100.0 1.5E-40 3.3E-45 307.3 20.8 246 91-377 5-256 (260)
271 cd05122 PKc_STE Catalytic doma 100.0 3.2E-40 6.9E-45 302.3 22.6 248 93-379 1-253 (253)
272 cd05059 PTKc_Tec_like Catalyti 100.0 9E-41 1.9E-45 308.2 19.0 245 92-377 4-254 (256)
273 cd06614 STKc_PAK Catalytic dom 100.0 1.6E-40 3.5E-45 311.5 21.0 260 89-386 16-279 (286)
274 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-40 3.8E-45 309.8 21.1 249 90-377 4-274 (277)
275 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.9E-41 6.3E-46 312.0 15.7 246 92-377 6-257 (261)
276 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-40 5.1E-45 305.2 21.4 246 92-378 6-253 (256)
277 cd06616 PKc_MKK4 Catalytic dom 100.0 6E-41 1.3E-45 314.7 17.7 254 93-384 5-274 (288)
278 cd05033 PTKc_EphR Catalytic do 100.0 3E-40 6.6E-45 306.3 21.9 247 92-378 4-262 (266)
279 KOG0596 Dual specificity; seri 100.0 2.7E-41 5.8E-46 319.8 14.9 252 92-383 361-633 (677)
280 cd05108 PTKc_EGFR Catalytic do 100.0 1.5E-40 3.2E-45 316.4 20.0 246 92-378 7-265 (316)
281 cd06641 STKc_MST3 Catalytic do 100.0 1.5E-40 3.3E-45 310.3 19.7 250 93-384 5-260 (277)
282 cd06635 STKc_TAO1 Catalytic do 100.0 5.8E-40 1.3E-44 312.5 24.0 272 91-402 24-302 (317)
283 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.7E-40 3.7E-45 324.7 20.8 249 91-377 36-393 (400)
284 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-40 5.7E-45 310.5 21.2 247 92-377 5-275 (288)
285 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.2E-40 1.3E-44 303.9 23.5 248 92-377 2-261 (267)
286 cd05054 PTKc_VEGFR Catalytic d 100.0 1E-40 2.2E-45 320.2 18.8 249 92-378 7-330 (337)
287 cd05089 PTKc_Tie1 Catalytic do 100.0 2.5E-40 5.5E-45 312.0 21.1 247 92-377 2-271 (297)
288 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-40 3E-45 308.5 19.0 248 92-377 2-261 (267)
289 cd06653 STKc_MEKK3_like_1 Cata 100.0 5.4E-40 1.2E-44 304.3 22.9 248 92-380 2-264 (264)
290 cd06633 STKc_TAO3 Catalytic do 100.0 5.3E-40 1.2E-44 312.2 23.3 253 92-384 21-280 (313)
291 cd05032 PTKc_InsR_like Catalyt 100.0 2.2E-40 4.7E-45 308.9 19.9 247 91-377 5-274 (277)
292 cd05034 PTKc_Src_like Catalyti 100.0 3.5E-40 7.6E-45 304.8 21.1 245 91-376 5-256 (261)
293 cd05613 STKc_MSK1_N N-terminal 100.0 3.4E-40 7.4E-45 309.9 21.3 257 93-387 1-278 (290)
294 cd06606 STKc_MAPKKK Catalytic 100.0 4.6E-40 9.9E-45 302.6 21.7 248 93-380 1-260 (260)
295 cd06634 STKc_TAO2 Catalytic do 100.0 2E-40 4.4E-45 314.4 19.9 273 91-403 14-293 (308)
296 KOG1187 Serine/threonine prote 100.0 4.9E-41 1.1E-45 321.6 15.6 259 83-378 66-349 (361)
297 cd05051 PTKc_DDR Catalytic dom 100.0 2.6E-40 5.6E-45 311.5 19.8 251 92-378 5-294 (296)
298 KOG0669 Cyclin T-dependent kin 100.0 9.8E-43 2.1E-47 300.5 3.0 259 91-386 16-324 (376)
299 cd08215 STKc_Nek Catalytic dom 100.0 6.7E-40 1.5E-44 301.5 21.8 249 93-380 1-258 (258)
300 cd00192 PTKc Catalytic domain 100.0 3.9E-40 8.4E-45 303.8 20.3 242 98-378 1-261 (262)
301 cd05055 PTKc_PDGFR Catalytic d 100.0 4.8E-40 1E-44 310.9 21.2 249 91-377 34-297 (302)
302 cd07829 STKc_CDK_like Catalyti 100.0 5.2E-40 1.1E-44 306.9 21.1 250 94-380 1-282 (282)
303 cd06627 STKc_Cdc7_like Catalyt 100.0 7.5E-40 1.6E-44 300.8 21.7 247 93-380 1-254 (254)
304 cd05098 PTKc_FGFR1 Catalytic d 100.0 4E-40 8.7E-45 312.2 20.1 249 91-378 17-296 (307)
305 KOG0695 Serine/threonine prote 100.0 9.3E-41 2E-45 298.9 14.2 273 91-397 249-536 (593)
306 cd05053 PTKc_FGFR Catalytic do 100.0 6.1E-40 1.3E-44 308.6 20.6 247 92-377 12-287 (293)
307 cd06657 STKc_PAK4 Catalytic do 100.0 3.2E-40 7E-45 310.6 18.7 252 94-385 22-278 (292)
308 cd05073 PTKc_Hck Catalytic dom 100.0 1.3E-39 2.9E-44 301.0 22.5 247 90-377 4-256 (260)
309 cd05094 PTKc_TrkC Catalytic do 100.0 7.9E-40 1.7E-44 307.7 21.2 247 92-377 5-278 (291)
310 cd05112 PTKc_Itk Catalytic dom 100.0 8.9E-40 1.9E-44 301.2 20.9 246 92-378 4-255 (256)
311 cd05109 PTKc_HER2 Catalytic do 100.0 9.6E-40 2.1E-44 305.1 21.2 246 91-377 6-264 (279)
312 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-40 5.1E-45 309.8 16.8 248 92-378 5-280 (283)
313 KOG0603 Ribosomal protein S6 k 100.0 1.8E-40 3.9E-45 320.6 16.3 243 90-380 320-566 (612)
314 cd05116 PTKc_Syk Catalytic dom 100.0 9E-40 1.9E-44 301.7 19.9 237 99-377 2-251 (257)
315 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 7.4E-40 1.6E-44 306.6 19.4 248 91-377 2-277 (283)
316 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.7E-40 5.9E-45 305.4 16.1 245 98-377 1-256 (258)
317 cd05083 PTKc_Chk Catalytic dom 100.0 1E-39 2.2E-44 300.7 19.7 243 92-377 6-250 (254)
318 cd05097 PTKc_DDR_like Catalyti 100.0 6.3E-40 1.4E-44 309.0 18.7 250 92-377 5-292 (295)
319 PF07714 Pkinase_Tyr: Protein 100.0 2.9E-40 6.2E-45 305.5 16.0 244 95-377 2-258 (259)
320 KOG0584 Serine/threonine prote 100.0 7.9E-41 1.7E-45 321.8 12.6 253 92-385 39-304 (632)
321 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-39 2.6E-44 304.7 20.1 247 92-377 5-277 (280)
322 cd08530 STKc_CNK2-like Catalyt 100.0 2.6E-39 5.7E-44 297.7 21.9 249 93-380 1-256 (256)
323 cd05583 STKc_MSK_N N-terminal 100.0 9.9E-40 2.1E-44 306.5 19.4 252 93-386 1-275 (288)
324 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.9E-39 4.1E-44 301.2 21.0 246 92-377 5-263 (268)
325 smart00219 TyrKc Tyrosine kina 100.0 1.8E-39 3.9E-44 299.0 20.7 245 94-377 1-257 (258)
326 cd05111 PTK_HER3 Pseudokinase 100.0 1.6E-39 3.4E-44 303.8 20.5 245 92-377 7-264 (279)
327 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-39 3.3E-44 307.7 20.4 249 91-378 14-293 (304)
328 KOG0608 Warts/lats-like serine 100.0 1.3E-40 2.8E-45 318.8 13.0 283 93-387 630-938 (1034)
329 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-39 4.2E-44 301.7 20.5 244 95-377 2-267 (272)
330 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-41 2.6E-46 348.5 6.2 253 89-383 1232-1500(1509)
331 cd05035 PTKc_Axl_like Catalyti 100.0 2.2E-39 4.8E-44 301.2 20.9 246 94-378 1-269 (273)
332 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-39 2.9E-44 302.3 19.2 246 92-377 4-262 (267)
333 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.3E-39 7.1E-44 306.9 22.3 248 92-378 12-290 (314)
334 KOG1026 Nerve growth factor re 100.0 7E-41 1.5E-45 333.1 11.2 247 92-377 486-758 (774)
335 cd06618 PKc_MKK7 Catalytic dom 100.0 1.6E-39 3.5E-44 306.3 20.0 255 92-385 15-281 (296)
336 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.4E-39 3.1E-44 318.1 20.2 248 92-377 37-395 (401)
337 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-39 4E-44 297.8 19.7 239 100-380 1-250 (250)
338 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-39 3.5E-44 308.9 19.9 255 104-384 12-302 (314)
339 cd05065 PTKc_EphR_B Catalytic 100.0 2.5E-39 5.3E-44 300.7 20.6 246 92-377 4-264 (269)
340 cd05060 PTKc_Syk_like Catalyti 100.0 2.7E-39 5.9E-44 298.4 20.7 238 98-377 1-251 (257)
341 cd05040 PTKc_Ack_like Catalyti 100.0 2.8E-39 6.1E-44 298.1 20.0 242 98-378 1-255 (257)
342 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-39 3.4E-44 300.4 18.2 248 93-380 1-260 (260)
343 PHA02882 putative serine/threo 100.0 2.9E-39 6.4E-44 304.4 20.1 257 86-377 6-292 (294)
344 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.8E-39 8.2E-44 309.1 21.0 249 92-379 12-291 (334)
345 cd05115 PTKc_Zap-70 Catalytic 100.0 4.4E-39 9.5E-44 297.2 20.5 239 99-378 2-252 (257)
346 cd05095 PTKc_DDR2 Catalytic do 100.0 3E-39 6.6E-44 304.5 19.7 251 91-377 4-293 (296)
347 cd05045 PTKc_RET Catalytic dom 100.0 3.2E-39 7E-44 303.4 19.7 246 93-377 1-282 (290)
348 cd05046 PTK_CCK4 Pseudokinase 100.0 4.5E-39 9.7E-44 299.8 20.1 250 92-379 5-274 (275)
349 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.1E-39 6.6E-44 302.6 19.0 248 93-377 5-279 (284)
350 cd05050 PTKc_Musk Catalytic do 100.0 4.5E-39 9.8E-44 302.0 19.8 247 92-377 5-285 (288)
351 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-39 8E-44 310.3 19.7 247 92-378 7-336 (343)
352 cd05047 PTKc_Tie Catalytic dom 100.0 5.9E-39 1.3E-43 298.4 19.7 241 98-377 1-264 (270)
353 cd05056 PTKc_FAK Catalytic dom 100.0 9E-39 2E-43 297.1 20.7 246 91-377 5-261 (270)
354 cd05057 PTKc_EGFR_like Catalyt 100.0 1E-38 2.2E-43 298.3 21.0 244 92-376 7-263 (279)
355 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.6E-39 1.9E-43 298.1 20.4 244 99-378 2-273 (274)
356 cd05576 STKc_RPK118_like Catal 100.0 3.3E-39 7.2E-44 294.4 17.2 228 103-380 4-237 (237)
357 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.1E-38 2.3E-43 295.5 20.4 245 98-378 1-261 (262)
358 KOG0194 Protein tyrosine kinas 100.0 1.4E-39 3E-44 313.9 14.6 246 93-377 158-416 (474)
359 cd05044 PTKc_c-ros Catalytic d 100.0 7E-39 1.5E-43 297.5 18.6 246 98-377 1-266 (269)
360 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-38 2.8E-43 292.5 20.0 239 98-377 1-247 (250)
361 cd05041 PTKc_Fes_like Catalyti 100.0 1.2E-38 2.5E-43 292.9 19.6 240 98-378 1-249 (251)
362 cd05043 PTK_Ryk Pseudokinase d 100.0 1.6E-38 3.4E-43 297.0 20.1 248 91-377 5-272 (280)
363 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-38 3.3E-43 297.7 19.9 247 92-377 4-279 (284)
364 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.4E-38 3.1E-43 293.5 19.1 243 98-377 1-257 (259)
365 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.9E-39 2.1E-43 298.6 17.8 249 92-377 4-279 (284)
366 KOG0587 Traf2- and Nck-interac 100.0 6.4E-39 1.4E-43 318.0 17.2 255 91-382 18-287 (953)
367 KOG0668 Casein kinase II, alph 100.0 5.4E-40 1.2E-44 279.9 7.8 257 90-387 36-332 (338)
368 cd05042 PTKc_Aatyk Catalytic d 100.0 2.5E-38 5.4E-43 293.9 19.6 244 98-378 1-267 (269)
369 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.4E-38 7.4E-43 293.1 19.8 243 98-377 1-266 (269)
370 KOG4250 TANK binding protein k 100.0 3.7E-39 8.1E-44 314.0 13.5 202 92-321 13-227 (732)
371 cd05110 PTKc_HER4 Catalytic do 100.0 3.7E-38 8.1E-43 298.1 19.7 246 92-378 7-265 (303)
372 cd08528 STKc_Nek10 Catalytic d 100.0 5.6E-38 1.2E-42 291.5 20.1 248 93-378 1-267 (269)
373 cd05058 PTKc_Met_Ron Catalytic 100.0 5.4E-38 1.2E-42 290.4 19.8 240 98-377 1-255 (262)
374 KOG1094 Discoidin domain recep 100.0 1.8E-38 3.8E-43 302.0 16.5 252 90-378 536-801 (807)
375 KOG1095 Protein tyrosine kinas 100.0 1.6E-38 3.5E-43 326.9 17.1 247 91-376 691-956 (1025)
376 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-37 2.9E-42 289.1 20.5 244 98-378 1-266 (268)
377 KOG1035 eIF-2alpha kinase GCN2 100.0 8.1E-39 1.7E-43 326.4 11.4 274 89-382 476-876 (1351)
378 KOG1151 Tousled-like protein k 100.0 3E-39 6.5E-44 298.4 7.4 261 85-382 456-746 (775)
379 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-37 3.1E-42 289.3 18.8 245 94-377 1-268 (273)
380 PLN03225 Serine/threonine-prot 100.0 2.5E-37 5.4E-42 313.3 21.2 256 91-386 131-459 (566)
381 KOG0664 Nemo-like MAPK-related 100.0 2E-39 4.3E-44 283.1 3.5 252 96-385 57-351 (449)
382 PLN03224 probable serine/threo 100.0 5.9E-37 1.3E-41 303.6 20.6 264 91-382 144-505 (507)
383 KOG0665 Jun-N-terminal kinase 100.0 9.5E-38 2.1E-42 278.3 13.1 250 91-381 16-314 (369)
384 KOG1006 Mitogen-activated prot 100.0 4.5E-39 9.8E-44 279.9 2.6 258 92-386 64-336 (361)
385 KOG0984 Mitogen-activated prot 100.0 2.1E-36 4.6E-41 254.3 15.3 210 92-332 46-267 (282)
386 KOG4278 Protein tyrosine kinas 100.0 2.6E-36 5.7E-41 288.7 14.1 244 94-376 269-518 (1157)
387 smart00220 S_TKc Serine/Threon 100.0 2.2E-35 4.7E-40 268.4 18.7 238 104-380 1-244 (244)
388 KOG0199 ACK and related non-re 100.0 1.4E-36 3.1E-41 294.1 9.3 248 93-381 111-372 (1039)
389 KOG1152 Signal transduction se 100.0 4.9E-36 1.1E-40 285.1 11.8 196 93-319 562-770 (772)
390 KOG2052 Activin A type IB rece 100.0 1.6E-35 3.4E-40 274.4 14.4 265 78-377 197-499 (513)
391 KOG1027 Serine/threonine prote 100.0 1.5E-36 3.2E-41 299.9 7.6 254 94-384 511-774 (903)
392 KOG0196 Tyrosine kinase, EPH ( 100.0 1.7E-36 3.6E-41 297.0 6.9 247 92-378 629-888 (996)
393 KOG4257 Focal adhesion tyrosin 100.0 1.8E-35 3.9E-40 283.3 10.7 240 95-376 392-644 (974)
394 PLN00113 leucine-rich repeat r 100.0 1.5E-34 3.2E-39 314.1 17.8 241 92-378 690-948 (968)
395 KOG3653 Transforming growth fa 100.0 2.8E-35 6.2E-40 274.6 10.3 244 92-375 210-497 (534)
396 KOG0576 Mitogen-activated prot 100.0 9.1E-35 2E-39 280.6 1.1 255 91-383 14-277 (829)
397 KOG1167 Serine/threonine prote 100.0 2.5E-33 5.5E-38 258.8 8.7 282 89-384 33-388 (418)
398 KOG1345 Serine/threonine kinas 100.0 2E-33 4.4E-38 245.3 6.8 256 90-382 22-292 (378)
399 PLN00181 protein SPA1-RELATED; 100.0 4E-33 8.6E-38 295.7 10.3 210 156-383 36-271 (793)
400 KOG1025 Epidermal growth facto 100.0 1.1E-32 2.3E-37 271.4 10.2 241 94-375 698-951 (1177)
401 KOG0200 Fibroblast/platelet-de 100.0 2E-31 4.4E-36 272.7 18.1 245 92-376 296-574 (609)
402 smart00221 STYKc Protein kinas 100.0 9.5E-31 2.1E-35 235.5 20.2 206 94-332 1-216 (225)
403 cd00180 PKc Catalytic domain o 100.0 2E-30 4.3E-35 230.0 19.6 207 100-378 1-215 (215)
404 KOG1164 Casein kinase (serine/ 100.0 2.2E-28 4.7E-33 232.9 20.8 209 93-324 19-243 (322)
405 KOG1163 Casein kinase (serine/ 100.0 8.6E-29 1.9E-33 213.0 13.8 249 90-368 13-275 (341)
406 KOG1024 Receptor-like protein 100.0 1.8E-29 3.8E-34 230.7 9.7 247 90-376 282-550 (563)
407 KOG1165 Casein kinase (serine/ 100.0 4.8E-28 1E-32 217.3 15.9 260 91-378 27-303 (449)
408 smart00750 KIND kinase non-cat 100.0 1.4E-28 3.1E-33 213.6 11.7 164 177-382 1-170 (176)
409 KOG0590 Checkpoint kinase and 99.9 4.2E-28 9E-33 245.5 3.9 262 91-390 316-598 (601)
410 PRK09188 serine/threonine prot 99.9 2.5E-26 5.4E-31 218.9 15.1 159 90-293 16-195 (365)
411 COG0515 SPS1 Serine/threonine 99.9 4.2E-25 9.1E-30 208.8 21.6 251 94-382 2-280 (384)
412 KOG0603 Ribosomal protein S6 k 99.9 1.5E-26 3.3E-31 224.3 3.4 239 100-387 2-253 (612)
413 KOG1240 Protein kinase contain 99.9 7E-26 1.5E-30 230.0 6.7 250 93-377 24-291 (1431)
414 PRK10359 lipopolysaccharide co 99.9 2.2E-24 4.9E-29 191.5 12.2 177 87-312 26-216 (232)
415 KOG0606 Microtubule-associated 99.9 4.3E-25 9.4E-30 224.1 7.5 243 91-387 82-325 (1205)
416 cd05147 RIO1_euk RIO kinase fa 99.9 7.2E-24 1.6E-28 185.9 13.3 138 97-272 2-168 (190)
417 cd05145 RIO1_like RIO kinase f 99.9 1E-22 2.2E-27 179.1 14.9 137 97-272 2-168 (190)
418 KOG4158 BRPK/PTEN-induced prot 99.9 2.4E-23 5.2E-28 191.3 11.2 207 151-387 274-524 (598)
419 PRK10345 hypothetical protein; 99.9 4.8E-22 1E-26 176.0 16.2 126 97-230 7-141 (210)
420 PF14531 Kinase-like: Kinase-l 99.9 6.7E-23 1.5E-27 187.5 9.0 237 93-368 13-288 (288)
421 PRK12274 serine/threonine prot 99.9 7.7E-22 1.7E-26 171.7 14.7 182 95-322 5-211 (218)
422 KOG1166 Mitotic checkpoint ser 99.9 1.2E-21 2.5E-26 202.8 11.9 200 91-317 697-902 (974)
423 smart00090 RIO RIO-like kinase 99.8 8.8E-21 1.9E-25 171.9 13.1 142 93-271 29-198 (237)
424 KOG0195 Integrin-linked kinase 99.8 2.6E-22 5.7E-27 176.0 1.6 241 93-375 191-440 (448)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 1.6E-21 3.5E-26 186.0 3.6 251 93-380 245-515 (516)
426 PRK14879 serine/threonine prot 99.8 3.2E-19 7E-24 159.5 14.7 132 98-270 2-143 (211)
427 cd05144 RIO2_C RIO kinase fami 99.8 1.4E-18 3E-23 153.9 13.6 136 94-272 17-176 (198)
428 TIGR03724 arch_bud32 Kae1-asso 99.8 1.4E-18 3E-23 154.0 12.6 128 99-270 1-138 (199)
429 KOG1023 Natriuretic peptide re 99.8 6.1E-19 1.3E-23 171.5 8.0 197 152-378 6-221 (484)
430 PRK09605 bifunctional UGMP fam 99.8 7.9E-18 1.7E-22 171.0 16.4 142 84-270 325-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 2.1E-17 4.5E-22 144.9 12.8 135 97-271 2-164 (187)
432 KOG0590 Checkpoint kinase and 99.7 1.5E-19 3.2E-24 183.5 -2.6 254 93-382 21-291 (601)
433 PRK01723 3-deoxy-D-manno-octul 99.7 2E-16 4.3E-21 143.7 15.1 134 98-270 37-191 (239)
434 KOG0601 Cyclin-dependent kinas 99.7 2.5E-17 5.5E-22 160.3 8.6 267 88-388 110-390 (524)
435 cd05120 APH_ChoK_like Aminogly 99.7 4.4E-16 9.4E-21 130.8 12.6 121 96-231 2-126 (155)
436 KOG0606 Microtubule-associated 99.6 1.3E-16 2.9E-21 162.9 2.7 296 92-396 804-1110(1205)
437 TIGR01982 UbiB 2-polyprenylphe 99.6 6.1E-14 1.3E-18 138.3 15.0 128 98-231 123-294 (437)
438 cd05146 RIO3_euk RIO kinase fa 99.5 3.4E-13 7.3E-18 117.5 14.1 137 98-272 3-175 (197)
439 KOG1266 Protein kinase [Signal 99.5 5.8E-15 1.3E-19 133.4 2.7 242 107-384 81-338 (458)
440 cd05151 ChoK Choline Kinase (C 99.5 1.7E-13 3.7E-18 118.0 11.5 114 97-228 3-122 (170)
441 PRK04750 ubiB putative ubiquin 99.5 2.7E-13 5.8E-18 135.5 13.2 130 93-231 121-297 (537)
442 KOG3087 Serine/threonine prote 99.4 1.3E-11 2.8E-16 103.7 14.1 145 96-271 11-166 (229)
443 KOG0601 Cyclin-dependent kinas 99.4 4.2E-13 9E-18 131.1 5.0 249 90-382 263-519 (524)
444 KOG1243 Protein kinase [Genera 99.3 8.5E-12 1.8E-16 123.3 12.3 182 94-314 15-199 (690)
445 cd05154 ACAD10_11_like Acyl-Co 99.3 4.2E-11 9.1E-16 107.6 11.4 108 98-212 4-117 (223)
446 COG3642 Mn2+-dependent serine/ 99.2 1.2E-10 2.5E-15 98.4 12.5 130 98-271 2-141 (204)
447 PRK15123 lipopolysaccharide co 99.2 1.3E-09 2.8E-14 100.4 17.3 140 108-269 38-193 (268)
448 PF01163 RIO1: RIO1 family; I 99.1 1.8E-10 3.9E-15 100.1 8.4 127 107-272 1-157 (188)
449 KOG2137 Protein kinase [Signal 99.1 1.7E-11 3.8E-16 121.5 0.1 167 202-387 107-275 (700)
450 PRK09902 hypothetical protein; 99.0 3.7E-08 8.1E-13 86.2 16.0 128 101-231 27-165 (216)
451 KOG3741 Poly(A) ribonuclease s 98.9 3.5E-08 7.6E-13 95.3 15.9 167 104-316 288-474 (655)
452 PF06293 Kdo: Lipopolysacchari 98.9 1.7E-08 3.6E-13 89.8 12.6 113 132-270 55-170 (206)
453 COG0478 RIO-like serine/threon 98.9 2.6E-08 5.5E-13 89.4 11.7 123 94-231 93-239 (304)
454 PF06176 WaaY: Lipopolysacchar 98.7 1.7E-07 3.6E-12 82.5 12.7 131 89-231 28-172 (229)
455 COG4248 Uncharacterized protei 98.7 5.7E-08 1.2E-12 91.7 9.3 194 97-321 16-225 (637)
456 COG1718 RIO1 Serine/threonine 98.7 2.8E-07 6.1E-12 82.0 12.5 136 98-272 54-217 (268)
457 PF01636 APH: Phosphotransfera 98.7 4.2E-07 9.2E-12 82.0 14.0 82 97-181 2-84 (239)
458 COG0661 AarF Predicted unusual 98.6 2.1E-07 4.5E-12 92.9 11.6 136 98-239 131-310 (517)
459 PF10707 YrbL-PhoP_reg: PhoP r 98.5 3.7E-06 8E-11 73.7 15.1 124 98-231 7-155 (199)
460 KOG0576 Mitogen-activated prot 98.5 7E-09 1.5E-13 102.3 -2.2 243 93-384 243-491 (829)
461 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 1.7E-06 3.8E-11 77.9 12.7 72 98-177 7-79 (226)
462 PF13095 FTA2: Kinetochore Sim 98.5 3.8E-06 8.3E-11 73.1 13.3 118 92-226 37-196 (207)
463 COG2112 Predicted Ser/Thr prot 98.4 4E-06 8.7E-11 70.7 10.4 133 93-272 23-157 (201)
464 cd05150 APH Aminoglycoside 3'- 98.3 1.4E-05 3E-10 73.0 12.6 75 99-181 5-81 (244)
465 cd05155 APH_ChoK_like_1 Unchar 98.2 9.9E-06 2.2E-10 73.6 10.8 76 98-179 3-81 (235)
466 PLN02876 acyl-CoA dehydrogenas 98.2 2.4E-05 5.1E-10 84.0 13.9 78 97-177 43-129 (822)
467 cd05157 ETNK_euk Ethanolamine 98.1 5.4E-05 1.2E-09 68.6 12.7 75 97-179 3-79 (235)
468 KOG1235 Predicted unusual prot 98.1 3.6E-05 7.8E-10 76.9 12.0 146 98-274 167-358 (538)
469 PRK09550 mtnK methylthioribose 98.0 0.00022 4.7E-09 69.4 15.0 75 97-175 31-113 (401)
470 cd05153 HomoserineK_II Homoser 97.9 0.00012 2.5E-09 68.9 11.7 79 97-179 19-101 (296)
471 cd05156 ChoK_euk Choline Kinas 97.8 0.00023 5E-09 67.2 11.7 75 97-179 3-84 (302)
472 PRK05231 homoserine kinase; Pr 97.8 0.00059 1.3E-08 64.9 14.6 77 97-177 27-107 (319)
473 KOG2270 Serine/threonine prote 97.8 0.0004 8.6E-09 65.5 12.2 139 96-273 148-316 (520)
474 TIGR00938 thrB_alt homoserine 97.8 0.00044 9.6E-09 65.4 12.8 80 95-177 25-108 (307)
475 KOG1035 eIF-2alpha kinase GCN2 97.8 0.00014 3.1E-09 77.2 10.1 204 134-382 228-439 (1351)
476 TIGR02721 ycfN_thiK thiamine k 97.7 0.00023 4.9E-09 65.5 10.1 71 99-179 3-75 (256)
477 KOG2268 Serine/threonine prote 97.4 0.00019 4.2E-09 66.4 5.2 130 94-239 94-247 (465)
478 TIGR01767 MTRK 5-methylthiorib 97.4 0.0026 5.6E-08 60.7 12.7 82 99-184 2-93 (370)
479 PLN02236 choline kinase 97.3 0.0034 7.4E-08 60.4 12.9 76 96-179 40-120 (344)
480 KOG1093 Predicted protein kina 97.3 0.0013 2.8E-08 64.6 9.0 83 297-383 110-200 (725)
481 PRK12396 5-methylribose kinase 97.2 0.0039 8.4E-08 60.3 11.4 83 97-183 34-125 (409)
482 PF12260 PIP49_C: Protein-kina 97.2 0.001 2.2E-08 58.1 6.8 94 136-239 7-107 (188)
483 PLN02421 phosphotransferase, a 97.2 0.0048 1E-07 59.0 12.0 74 98-179 20-97 (330)
484 cd05152 MPH2' Macrolide 2'-Pho 97.2 0.0049 1.1E-07 57.3 11.3 46 100-147 19-64 (276)
485 KOG1826 Ras GTPase activating 97.1 0.0001 2.2E-09 80.1 -0.4 151 136-318 1277-1440(2724)
486 PRK10593 hypothetical protein; 97.1 0.0043 9.4E-08 58.3 10.6 106 95-213 17-127 (297)
487 PRK11768 serine/threonine prot 96.9 0.036 7.8E-07 52.9 15.4 74 103-177 36-112 (325)
488 TIGR02906 spore_CotS spore coa 96.9 0.025 5.3E-07 53.5 14.3 67 107-178 11-81 (313)
489 COG3173 Predicted aminoglycosi 96.8 0.011 2.4E-07 55.6 10.6 77 95-176 28-109 (321)
490 PLN02756 S-methyl-5-thioribose 96.8 0.026 5.5E-07 55.0 13.0 74 96-175 36-117 (418)
491 PTZ00384 choline kinase; Provi 96.5 0.062 1.3E-06 52.4 13.6 76 96-179 54-136 (383)
492 PF01633 Choline_kinase: Choli 96.4 0.0098 2.1E-07 52.9 6.8 54 117-178 2-56 (211)
493 PF03881 Fructosamin_kin: Fruc 96.1 0.043 9.4E-07 51.2 9.6 75 95-175 20-94 (288)
494 PF07387 Seadorna_VP7: Seadorn 96.0 0.027 6E-07 49.7 7.5 112 103-240 73-189 (308)
495 KOG1236 Predicted unusual prot 96.0 0.034 7.4E-07 53.5 8.3 61 168-231 320-382 (565)
496 COG2334 Putative homoserine ki 95.9 0.16 3.4E-06 48.4 12.5 78 99-180 33-116 (331)
497 PTZ00296 choline kinase; Provi 95.8 0.11 2.4E-06 51.6 11.8 74 96-177 109-191 (442)
498 PRK06148 hypothetical protein; 95.8 0.14 3.1E-06 56.3 13.5 81 98-181 31-122 (1013)
499 TIGR02904 spore_ysxE spore coa 95.7 0.17 3.8E-06 47.8 12.2 66 103-175 17-88 (309)
500 PHA03111 Ser/Thr kinase; Provi 95.3 0.019 4.1E-07 53.6 4.1 73 193-274 278-354 (444)
No 1
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-59 Score=426.50 Aligned_cols=265 Identities=26% Similarity=0.392 Sum_probs=236.3
Q ss_pred CccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh--------hhHHHHHHHHHHHHHhcCCCCCcceEEEe
Q 015222 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTRCVQIR 159 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~ 159 (411)
..+.+.|.+.+.||+|+||.|-+|..+.||+.||||++++... .....++|++||++|+||+| |+++
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~I-----V~~~ 242 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNI-----VRIK 242 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCE-----EEEe
Confidence 3467789999999999999999999999999999999975321 22345799999999999988 9999
Q ss_pred eeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 015222 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238 (411)
Q Consensus 160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df 238 (411)
++|+..+..|+||||+ ||+|.+++-.++ .+.+..-+.+++|++.|+.|||++||+||||||+|||+..+.
T Consensus 243 d~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~------- 313 (475)
T KOG0615|consen 243 DFFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA------- 313 (475)
T ss_pred eeeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC-------
Confidence 9999999999999999 999999999887 688999999999999999999999999999999999997753
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccC--CCcccccCCCccccceecCCC---CCccchhHHHHHHHHHHHh
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~ellt 313 (411)
....+||+|||+|+..+. ...+.+||+.|.|||++.+.. +..++||||+||+||.+|+
T Consensus 314 -----------------e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs 376 (475)
T KOG0615|consen 314 -----------------EDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS 376 (475)
T ss_pred -----------------cceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec
Confidence 456899999999998853 457789999999999998774 3358899999999999999
Q ss_pred CCCCCCCCChHH-HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 314 GEALFQTHENLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 314 g~~pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
|.+||.+..... ..+.|.++...+-+..+..+++++.++|..||..| |+.|+++.|+|+||||+.+...+
T Consensus 377 G~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd----P~~R~s~~eaL~hpW~~~~~~~s 447 (475)
T KOG0615|consen 377 GYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD----PENRPSADEALNHPWFKDAPCLS 447 (475)
T ss_pred cCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC----cccCcCHHHHhcChhhhcccccc
Confidence 999998876555 77888888888888888999999999999999999 99999999999999999887655
No 2
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-57 Score=411.66 Aligned_cols=308 Identities=59% Similarity=1.017 Sum_probs=278.8
Q ss_pred CCCCCCCCCCCCCCCceEEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH
Q 015222 66 PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145 (411)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l 145 (411)
++...+++.+++.+|++.+.+++.+.++|.++..+|+|.||.|-.+.+..++..||||+++...+.++....|+++|+++
T Consensus 63 ~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki 142 (415)
T KOG0671|consen 63 ARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKI 142 (415)
T ss_pred ccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 56677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCC-CCCcceEEEeeeeecCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 015222 146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224 (411)
Q Consensus 146 ~~~~-i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~N 224 (411)
.+.. -+...|+++.+||+..++.|||+|.+|-|+++++..++...++...++.++.||+++++|||+.+++|.||||+|
T Consensus 143 ~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN 222 (415)
T KOG0671|consen 143 NESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN 222 (415)
T ss_pred HhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence 7765 345678999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHH
Q 015222 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304 (411)
Q Consensus 225 Ili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 304 (411)
||+.+..+.+..+.+-. ..+.+..++..++++|||.|+...+..++.+.|..|+|||++.+-+++.++||||+
T Consensus 223 ILfvss~~~~~~~~k~~-------~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 223 ILFVSSEYFKTYNPKKK-------VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred EEEeccceEEEeccCCc-------cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceee
Confidence 99999887766554321 12223456778999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhh---------------------------------------
Q 015222 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA--------------------------------------- 345 (411)
Q Consensus 305 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~--------------------------------------- 345 (411)
||||+||.+|...|++.++.+++++++++.+++|..+....
T Consensus 296 GCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~ 375 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQD 375 (415)
T ss_pred eeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccC
Confidence 99999999999999999999999999999999998775544
Q ss_pred ---hhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 346 ---DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 346 ---~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
...+-+++++||..| |++|+|+.|+|.||||....
T Consensus 376 d~e~~~LfDLl~~mL~fD----P~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 376 DLEHVQLFDLLRRMLEFD----PARRITLREALSHPFFARLT 413 (415)
T ss_pred cHHHhHHHHHHHHHHccC----ccccccHHHHhcCHHhhcCC
Confidence 123668999999999 99999999999999998653
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-57 Score=430.90 Aligned_cols=249 Identities=29% Similarity=0.451 Sum_probs=231.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc----chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.+|...+.||+|||+.||++++..+|+.||+|++.+ ....++.+.+|++|.++|+|+|| |+++++|++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnI-----V~f~~~FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNI-----VQFYHFFEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcE-----EeeeeEeecCCc
Confidence 579999999999999999999999999999999976 45677889999999999999888 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|||+|+| .++|..+++++. .++|.+++.++.||+.||.|||+++|+|||||..|+|++++
T Consensus 93 VYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~---------------- 154 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNEN---------------- 154 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCc----------------
Confidence 99999999 999999999665 89999999999999999999999999999999999998654
Q ss_pred CCCccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.+|||+|||+|.... +...+.+|||.|+|||++.....+..+||||+|||||.||.|++||+..+-
T Consensus 155 -----------~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v 223 (592)
T KOG0575|consen 155 -----------MNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV 223 (592)
T ss_pred -----------CcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH
Confidence 489999999998766 456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.+.+..|......+|. .++.+++++|.++|+.+ |.+|||+.+|+.|+||..
T Consensus 224 kety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~----P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 224 KETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPN----PSERPSLDEVLDHPFFKS 274 (592)
T ss_pred HHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCC----cccCCCHHHHhcCHhhhC
Confidence 9999999999999987 46788999999999999 999999999999999943
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-56 Score=403.04 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=226.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEec--cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC-eE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-~~ 168 (411)
.+.+.++.||+|+.|+||+|+++.|++.+|+|++. .....++++.+|+++++..++++| |.+|+.|...+ .+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyI-----V~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYI-----VGFYGAFYSNGEEI 153 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCe-----eeEeEEEEeCCceE
Confidence 46788899999999999999999999999999994 445677889999999999988877 99999999988 59
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+|||| +|+|.+++...+ .++|.....|+.+|++||.|||+ ++||||||||+||||++.|
T Consensus 154 sI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--------------- 216 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--------------- 216 (364)
T ss_pred EeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC---------------
Confidence 9999999 999999998775 79999999999999999999995 8999999999999998887
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC--Ch
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH--EN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~--~~ 323 (411)
.|||||||.+...... ..+++||..|||||.+.+..|+.++||||||++++|+.+|+.||... ..
T Consensus 217 ------------eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~ 284 (364)
T KOG0581|consen 217 ------------EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPY 284 (364)
T ss_pred ------------CEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCC
Confidence 7899999998875444 46789999999999999999999999999999999999999999874 23
Q ss_pred HHHHHHHHHHhCCCChhHHHh-hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 324 LEHLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~-~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
...+..+..+....|+..... +++++++|+..||++| |.+|++++|+++|||+........
T Consensus 285 ~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kd----p~~R~s~~qLl~Hpfi~~~~~~~v 346 (364)
T KOG0581|consen 285 LDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKD----PSERPSAKQLLQHPFIKKFEDPNV 346 (364)
T ss_pred CCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCC----cccCCCHHHHhcCHHHhhcccccc
Confidence 344455555555455555554 8999999999999999 999999999999999997665443
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-56 Score=401.97 Aligned_cols=260 Identities=24% Similarity=0.404 Sum_probs=229.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||+||.++.+.|++.+|+|++++.. ...+....|..||.+++||.| |.++..|++.++
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFi-----v~l~ysFQt~~k 99 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFI-----VKLIYSFQTEEK 99 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcE-----eeeEEecccCCe
Confidence 57999999999999999999999999999999998643 345677889999999888877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+|+||+ ||.|...|++.+ .+++..++.++..|+.||.|||++|||||||||+|||++.+|
T Consensus 100 LylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--------------- 162 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--------------- 162 (357)
T ss_pred EEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC---------------
Confidence 99999999 999999999877 799999999999999999999999999999999999999888
Q ss_pred CCCccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
+++|+|||+++... ....+++||+.|||||++.+..|+.++|+||||+++|||++|.+||.+.+.
T Consensus 163 ------------Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 163 ------------HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred ------------cEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH
Confidence 66777777776432 234557999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH----HHHHHHHhcCCCCcccccCCCCCc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR----DSMRAVWKLLRLPVIDLYSASPNC 392 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R----~t~~~il~~~~~~~~~~~~~~~~~ 392 (411)
....+.|.+.....++. -++.+++++++++|..+ |++| -.+.++.+|+||..++|.......
T Consensus 231 ~~~~~~I~~~k~~~~p~---~ls~~ardll~~LL~rd----p~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~ 296 (357)
T KOG0598|consen 231 KKMYDKILKGKLPLPPG---YLSEEARDLLKKLLKRD----PRQRLGGPGDAEEIKRHPFFKGINWEKLLAKK 296 (357)
T ss_pred HHHHHHHhcCcCCCCCc---cCCHHHHHHHHHHhccC----HHHhcCCCCChHHhhcCcccccCCHHHHHhcC
Confidence 99999988876444433 25778999999999999 6677 589999999999999997764443
No 6
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.8e-55 Score=421.45 Aligned_cols=285 Identities=39% Similarity=0.697 Sum_probs=260.3
Q ss_pred CCCCCCceEEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHh-cCCCCCc
Q 015222 75 PDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT 153 (411)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~ 153 (411)
.++.++.|.+..++.+..+|.|++.||+|+||.|.+|.+..|++.||||+++.......+.+.|+.+|..|+ |.+-...
T Consensus 169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 556777899999999999999999999999999999999999999999999998888899999999999999 5555667
Q ss_pred ceEEEeeeeecCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 015222 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 154 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~ 233 (411)
|+|+++++|.+.+|+|||+|+++.+|+++++.+....++...++.++.||+.||.+||+.||||+||||||||+.+.+
T Consensus 249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-- 326 (586)
T KOG0667|consen 249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-- 326 (586)
T ss_pred eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC--
Confidence 999999999999999999999999999999999988999999999999999999999999999999999999997654
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 313 (411)
...+||+|||+|.+..+...+.+.+..|+|||++.|.+|+.+.||||||||++||++
T Consensus 327 -----------------------r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~t 383 (586)
T KOG0667|consen 327 -----------------------RSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFT 383 (586)
T ss_pred -----------------------cCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhc
Confidence 348999999999999888888899999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCChhHHHh-------------------------------------------------
Q 015222 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIR------------------------------------------------- 344 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~------------------------------------------------- 344 (411)
|.+.|.|.++.+++..|.++.|.+|..+...
T Consensus 384 G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~ 463 (586)
T KOG0667|consen 384 GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGS 463 (586)
T ss_pred CccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCC
Confidence 9999999999999999999998777654321
Q ss_pred ----------hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 345 ----------ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 345 ----------~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
....+.+||.+||..| |.+|+|..++++|||+........
T Consensus 464 ~~l~~~~~~~~~~~F~dflk~~L~~d----P~~R~tp~qal~Hpfl~~~~~~~~ 513 (586)
T KOG0667|consen 464 RSLESGLPKADDKLFIDFLKRCLEWD----PAERITPAQALNHPFLTGTSLERR 513 (586)
T ss_pred cccchhcccccHHHHHHHHHHHhccC----chhcCCHHHHhcCccccccccccc
Confidence 1234678999999999 999999999999999996665443
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-54 Score=409.19 Aligned_cols=272 Identities=22% Similarity=0.315 Sum_probs=230.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
..+|.+.+.||+|+|++|++|+++.+++.||||++.+.. ...+.+.+|-.+|.+|. +||.|++++-.|+++.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~----~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS----GHPGIVKLYFTFQDEE 147 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh----CCCCeEEEEEEeeccc
Confidence 468999999999999999999999999999999997543 23345678999999995 3355599999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+|+||+ +|+|.++|.+.+ .|++..++.++.||+.||+|||++|||||||||+|||++.+|+++|+|||-++...
T Consensus 148 sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999 999999999987 89999999999999999999999999999999999999999877666666554333
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
....... .+-...........++||..|.+||++..+..++.+|||+||||||+|+.|.+||.+.++.-
T Consensus 226 ~~~~~~~-----------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl 294 (604)
T KOG0592|consen 226 PSQKSQE-----------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL 294 (604)
T ss_pred hhhcccc-----------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH
Confidence 2211000 00000001111245899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
.+++|......+|+.+ ++.++++|+++|..| |..|.|+++|.+||||.+++|..
T Consensus 295 iFqkI~~l~y~fp~~f----p~~a~dLv~KLLv~d----p~~Rlt~~qIk~HpFF~~Vdw~n 348 (604)
T KOG0592|consen 295 IFQKIQALDYEFPEGF----PEDARDLIKKLLVRD----PSDRLTSQQIKAHPFFEGVDWEN 348 (604)
T ss_pred HHHHHHHhcccCCCCC----CHHHHHHHHHHHccC----ccccccHHHHhhCcccccCChhh
Confidence 9999999999998876 477899999999999 99999999999999999999865
No 8
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-54 Score=381.30 Aligned_cols=260 Identities=22% Similarity=0.372 Sum_probs=235.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||.|+||.|.+++++.+|..+|+|++++.. +..+...+|..+|+.+.||.+ +++.+.|.+.+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFl-----v~l~~t~~d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFL-----VKLYGTFKDNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCcee-----EEEEEeeccCCe
Confidence 57999999999999999999999999999999998643 455677889999999998877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||. ||.|..++++.+ ++++..++.++.||+.||+|||+++|++|||||+|||++.+|
T Consensus 119 lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--------------- 181 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--------------- 181 (355)
T ss_pred EEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC---------------
Confidence 99999999 999999999876 899999999999999999999999999999999999998887
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.+||+|||+|+.......+.+|||.|+|||+++..+|+.++|.|||||++|||+.|.+||.+.+....
T Consensus 182 ------------~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~i 249 (355)
T KOG0616|consen 182 ------------HIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQI 249 (355)
T ss_pred ------------cEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHH
Confidence 67888899998888887889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCC-CcHHHHHHHHhcCCCCcccccCCC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA-TSRDSMRAVWKLLRLPVIDLYSAS 389 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp-~~R~t~~~il~~~~~~~~~~~~~~ 389 (411)
+++|......+|..+ +..++++|+++|+.|-.+|. ......++|..|+||.+++|....
T Consensus 250 Y~KI~~~~v~fP~~f----s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~ 309 (355)
T KOG0616|consen 250 YEKILEGKVKFPSYF----SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAIL 309 (355)
T ss_pred HHHHHhCcccCCccc----CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHh
Confidence 999999988998875 56688888899888855552 223577899999999999987653
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-53 Score=389.89 Aligned_cols=261 Identities=26% Similarity=0.414 Sum_probs=226.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.++|.+.++||+|+||+||+|+++.++..||||.+.+. .+..+.+..|+.+|+.++|+|| |.+++++++.++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nI-----V~l~d~~~~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNI-----VRLLDCIEDDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcce-----eeEEEEEecCCe
Confidence 46799999999999999999999999999999999754 3566778899999999998887 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||| ||+|.+|+++++ .+++..++.++.||+.||++||+++||||||||+||||+....
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~-------------- 147 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR-------------- 147 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC--------------
Confidence 99999999 999999999987 7999999999999999999999999999999999999977420
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+....+||+|||+|+...... .+.+|++.|||||++..+.|+.|+|+||+|+|||+|++|+.||...+..
T Consensus 148 -------~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~ 220 (429)
T KOG0595|consen 148 -------NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK 220 (429)
T ss_pred -------CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence 1112589999999999876543 5689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
+.+..+.+.....|. .....+....+++...+..+ +..|.+..+-+.|+++..-.
T Consensus 221 eL~~~~~k~~~~~~~-~~~~~s~~~~~Ll~~ll~~~----~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 221 ELLLYIKKGNEIVPV-LPAELSNPLRELLISLLQRN----PKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHHHHHhccccccCc-hhhhccCchhhhhhHHHhcC----ccccCchHHhhhhhhcccCc
Confidence 988877766544332 33445566668888888888 88999999999988877543
No 10
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.3e-53 Score=403.23 Aligned_cols=287 Identities=23% Similarity=0.337 Sum_probs=233.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|++++.||+|+||.||+|+.+.||..+|+|+++++.. ..+.+..|-.+|.....+.+ |+++-.|++.+
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~v-----VKLyYsFQD~~ 214 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWV-----VKLYYSFQDKE 214 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcE-----EEEEEEecCCC
Confidence 4689999999999999999999999999999999987653 34556678888877656555 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
++||||||+ ||++..+|.+.+ .|++..++.++.+++.|++.+|+.|+|||||||+|+|||..|++||+||||+.-..
T Consensus 215 ~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 215 YLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred eeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999 999999999887 89999999999999999999999999999999999999999999999999985443
Q ss_pred CCCCccc------cCCCCCCeeEeecCCc--cccc--C----------C---CcccccCCCccccceecCCCCCccchhH
Q 015222 246 KDGSYFK------NLPKSSAIKLIDFGST--TFEH--Q----------D---HSYVVSTRHYRAPEVILGLGWNYPCDLW 302 (411)
Q Consensus 246 ~~~~~~~------~~~~~~~~kl~Dfg~a--~~~~--~----------~---~~~~~gt~~y~aPE~~~~~~~~~~~Diw 302 (411)
....... ........+-.||... .... . . ....+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 3222110 0001112344455431 1100 0 0 1236899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 303 SVGCILVELCSGEALFQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 303 SlGvil~elltg~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
|||||+||||.|.+||.+.+..+...+|..... .+|.. ..++++++|+|.++|. |+.+|-. -..++||.+||||
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~~~RLG-~~G~~EIK~HPfF 448 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DPENRLG-SKGAEEIKKHPFF 448 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CHHHhcC-cccHHHHhcCCcc
Confidence 999999999999999999999999999987664 44444 4567999999999998 8343333 3469999999999
Q ss_pred CcccccCC
Q 015222 381 PVIDLYSA 388 (411)
Q Consensus 381 ~~~~~~~~ 388 (411)
++++|.-.
T Consensus 449 ~~v~W~~l 456 (550)
T KOG0605|consen 449 KGVDWDHL 456 (550)
T ss_pred ccCCcchh
Confidence 99998654
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-53 Score=377.23 Aligned_cols=256 Identities=28% Similarity=0.516 Sum_probs=228.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|+.+.++|+|+||+||+|+++.||+.||||++..+. ...+-..+|+.+|++++|+|+ |.++++|.....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NL-----VnLiEVFrrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENL-----VNLIEVFRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchH-----HHHHHHHHhccee
Confidence 57999999999999999999999999999999996433 345677899999999999998 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|+|||..++.+-|.+.. ..++.+.++.++.|++.|+.|+|++++|||||||+||||+.+|
T Consensus 77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g----------------- 138 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG----------------- 138 (396)
T ss_pred EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC-----------------
Confidence 9999999888888888776 4699999999999999999999999999999999999998877
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||||||+|+..... -+.++.|.+|+|||.+.|. .|+.++||||+||++.||++|++.|.+.++.
T Consensus 139 ----------vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi 208 (396)
T KOG0593|consen 139 ----------VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI 208 (396)
T ss_pred ----------cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence 7789999998876532 2346889999999999985 8999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhHH---------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMV---------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~---------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+++..|.+..|.+.++-. +.++..+.+|+++||.+| |++|.+-++++.|
T Consensus 209 DQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d----P~~R~sc~qll~H 284 (396)
T KOG0593|consen 209 DQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD----PDDRLSCEQLLHH 284 (396)
T ss_pred HHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCC----ccccccHHHHhcC
Confidence 999999998887654432 234567889999999999 9999999999999
Q ss_pred CCCCccc
Q 015222 378 LRLPVID 384 (411)
Q Consensus 378 ~~~~~~~ 384 (411)
++|.++.
T Consensus 285 ~yFd~~~ 291 (396)
T KOG0593|consen 285 PYFDGFI 291 (396)
T ss_pred hHHHHHH
Confidence 9996554
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-53 Score=394.21 Aligned_cols=276 Identities=29% Similarity=0.464 Sum_probs=236.1
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.-.+.|+.+++||+|+||.||+|++..+|+.||+|.++... .......+|+.||++|.|+|| +++.+...+.
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNI-----ikL~eivt~~ 188 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNI-----IKLEEIVTSK 188 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcc-----cceeeEEEec
Confidence 33467999999999999999999999999999999997543 345667899999999999988 9999988765
Q ss_pred --CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 166 --NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 166 --~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
..+|+|+|||..+|..++.... ..|++.+++.+++||+.||+|||++||+|||||.+||||+++|
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G------------ 255 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG------------ 255 (560)
T ss_pred CCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC------------
Confidence 7999999999999999988754 4799999999999999999999999999999999999998887
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.+||+|||+|++.... .+..+-|.+|+|||+++|. .|+.++|+||.||||.||++|++.|
T Consensus 256 ---------------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~ 320 (560)
T KOG0600|consen 256 ---------------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPIL 320 (560)
T ss_pred ---------------CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCc
Confidence 6788888888865433 2446789999999999998 7999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHH-------------------------hhhhhhhhhhccCCccCCCCCCCcHHHHHH
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVI-------------------------RADRRAEKYFRRGARLDWPDGATSRDSMRA 373 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~-------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~~~ 373 (411)
.+.++.+++..|.+..|...+..|+ ..+..+.+|+..+|.+| |.+|.|+.+
T Consensus 321 ~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ld----P~kR~tA~~ 396 (560)
T KOG0600|consen 321 QGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLD----PDKRGTASS 396 (560)
T ss_pred CCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccC----ccccccHHH
Confidence 9999999999999999876665554 24567888999999999 999999999
Q ss_pred HHhcCCCCcccccCCCCCchhhHHHHHHHH
Q 015222 374 VWKLLRLPVIDLYSASPNCLCKFYAITHCL 403 (411)
Q Consensus 374 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (411)
+|++.|| ...+....|..|.. |...|.+
T Consensus 397 aL~seyF-~t~p~~~~p~~Lp~-y~~s~E~ 424 (560)
T KOG0600|consen 397 ALQSEYF-TTEPLPCDPSSLPK-YPPSHEL 424 (560)
T ss_pred HhcCccc-ccCCCCCCcccCCC-CCcchhH
Confidence 9999999 44444445554444 4444433
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-53 Score=394.79 Aligned_cols=259 Identities=31% Similarity=0.486 Sum_probs=228.0
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHH--HHHHHHHHHHh-cCCCCCcceEEEeeeeecCC
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~--~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~ 166 (411)
+.+||.++++||.|+||.||+|+.+.+++.||||.+++.-...++. .+|+..|++|+ |+|| +++.+++.+.+
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpni-----ikL~Evi~d~~ 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNI-----IKLKEVIRDND 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcc-----hhhHHHhhccC
Confidence 4579999999999999999999999999999999998644333333 57999999998 8877 99999998877
Q ss_pred -eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 -HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 -~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+|||||..+|+++++.+ ...|++..++.|+.||++||+|+|.+|+.|||+||||||+...
T Consensus 83 ~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~--------------- 146 (538)
T KOG0661|consen 83 RILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGN--------------- 146 (538)
T ss_pred ceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEeccc---------------
Confidence 99999999999999999988 4789999999999999999999999999999999999999643
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
..+||+|||+|+...... +.++.|.+|+|||++... .|+.+.||||+|||++|+.+-++.|.|.+
T Consensus 147 ------------~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 147 ------------DVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred ------------ceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 378999999999876544 457899999999998765 78999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCChhH--------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 323 NLEHLAMMERVLGPLPHHM--------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~--------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+++.+|..+.|...... .+..+.++.++|.+|++.| |.+|||+.++|+
T Consensus 215 E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WD----P~kRpTA~~al~ 290 (538)
T KOG0661|consen 215 EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWD----PDKRPTASQALQ 290 (538)
T ss_pred HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCC----CccCccHHHHhc
Confidence 9999999999888644322 2235678889999999999 999999999999
Q ss_pred cCCCCcccc
Q 015222 377 LLRLPVIDL 385 (411)
Q Consensus 377 ~~~~~~~~~ 385 (411)
||||+.-..
T Consensus 291 ~pffq~~~~ 299 (538)
T KOG0661|consen 291 HPFFQVGRA 299 (538)
T ss_pred Ccccccccc
Confidence 999997544
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-51 Score=394.56 Aligned_cols=254 Identities=28% Similarity=0.425 Sum_probs=226.2
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc-----h-hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeee
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----N-KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW 161 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----~-~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~ 161 (411)
...++|.+.+.||+|+||+|++|.+..+++.||+|++++. . ...+.+.+|+.+++++. |+|| ++++++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI-----~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNI-----IRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCE-----eEEEEE
Confidence 4457899999999999999999999999999999987653 1 23456678999999999 7766 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
+.....+|+||||+ ||+|.+++...+ ++.+..++.++.||+.|++|||++||+||||||+|||++.+.
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~--------- 157 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE--------- 157 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC---------
Confidence 99999999999999 899999999854 799999999999999999999999999999999999997651
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCC-CC-ccchhHHHHHHHHHHHhCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLG-WN-YPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwSlGvil~elltg~ 315 (411)
.++||+|||++.... ....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+
T Consensus 158 -----------------~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 158 -----------------GNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred -----------------CCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 378999999888762 3446689999999999999987 86 8999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.||...+.......|.+....+|..+. +..+++++.+||..+ |.+|+++.++++|+||+.
T Consensus 221 ~PF~d~~~~~l~~ki~~~~~~~p~~~~---S~~~~~Li~~mL~~~----P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 221 LPFDDSNVPNLYRKIRKGEFKIPSYLL---SPEARSLIEKMLVPD----PSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCCCCccHHHHHHHHhcCCccCCCCcC---CHHHHHHHHHHcCCC----cccCCCHHHHhhChhhcc
Confidence 999998888888888887777777653 788999999999999 999999999999999997
No 15
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-53 Score=369.73 Aligned_cols=252 Identities=27% Similarity=0.386 Sum_probs=215.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEee-eeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRN-WFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~-~~~~~~ 166 (411)
...|+|+++||+|+||+||++.+..+|..||.|.++- +.+.++....|+.+|++|+|+|| |++++ .|..++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNI-----VqYy~~~f~~~~ 92 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNI-----VQYYAHSFIEDN 92 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchH-----HHHHHHhhhccc
Confidence 3579999999999999999999999999999999873 34566778899999999999988 99988 455555
Q ss_pred e-EEEEEccC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCcEEEecCcccccCCc
Q 015222 167 H-ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHE--LR--LIHTDLKPENILLVSAEYVKVPDY 238 (411)
Q Consensus 167 ~-~~lv~e~~-~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~--~g--ivH~Dikp~NIli~~~~~~~l~df 238 (411)
. ++||||+| +|+|.+.++. ...+.+++..+++++.|++.||..+|+ .. |+||||||.||+++.+|
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g------- 165 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG------- 165 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC-------
Confidence 5 99999999 9999999873 344679999999999999999999999 44 99999999999998777
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCC
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 315 (411)
.+||+|||+++...... .+.+|||+||+||.+.+.+|+++|||||+||++|||+.-+
T Consensus 166 --------------------vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~ 225 (375)
T KOG0591|consen 166 --------------------VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQ 225 (375)
T ss_pred --------------------ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcC
Confidence 78999999998876554 4479999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+||.+.+-.+...+|.++.. |+-....++..+..+|..|+..|+..||+.-|-+.++..
T Consensus 226 ~PF~g~n~~~L~~KI~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 226 SPFYGDNLLSLCKKIEQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred CCcccccHHHHHHHHHcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 99999988888888887643 322334578889999999999997777766555555544
No 16
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.3e-49 Score=398.12 Aligned_cols=289 Identities=38% Similarity=0.662 Sum_probs=237.1
Q ss_pred CceEEeeCCcc---CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCC-Ccce
Q 015222 80 GHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTRC 155 (411)
Q Consensus 80 ~~~~~~~~~~~---~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~-~~~i 155 (411)
+.+....++.+ .++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.|.++. +.++
T Consensus 114 ~~~~~~~~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i 193 (467)
T PTZ00284 114 GHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPL 193 (467)
T ss_pred CceeEecCCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcce
Confidence 34455555544 5789999999999999999999999999999999976555556677899999999987754 4568
Q ss_pred EEEeeeeecC-CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCccc
Q 015222 156 VQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 156 v~~~~~~~~~-~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~ 233 (411)
+.++++|... +++|+|||+++++|.+++.+.. .+++..+..|+.||+.||+|||+ .|||||||||+|||++.++..
T Consensus 194 ~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 194 MKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTV 271 (467)
T ss_pred eeeEEEEEcCCceEEEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcc
Confidence 8999988764 5899999999999999998765 69999999999999999999998 599999999999999876632
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 313 (411)
. ++..... ...+...+||+|||.+..........+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 272 ~--~~~~~~~---------~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~ellt 340 (467)
T PTZ00284 272 V--DPVTNRA---------LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYT 340 (467)
T ss_pred c--ccccccc---------cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHh
Confidence 1 1111000 0112346999999988766555566789999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCChhHHHh--------------------------------------hhhhhhhhhcc
Q 015222 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIR--------------------------------------ADRRAEKYFRR 355 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~--------------------------------------~~~~~~~li~~ 355 (411)
|+.||.+.+..+.+..+.+..+.+|..+... .+..+.+||.+
T Consensus 341 G~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~ 420 (467)
T PTZ00284 341 GKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYG 420 (467)
T ss_pred CCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHH
Confidence 9999999888888888888877777654321 12346699999
Q ss_pred CCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 356 GARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 356 ~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
||..| |.+|+|++|+|+||||.....
T Consensus 421 mL~~d----P~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 421 LLHYD----RQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred hCCcC----hhhCCCHHHHhcCccccccCC
Confidence 99999 999999999999999997554
No 17
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.5e-51 Score=356.33 Aligned_cols=259 Identities=28% Similarity=0.445 Sum_probs=228.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.+|..+++||+|.||.||+|++..||+.||||.++..+. ......+|++.|+.++|+|| +.++++|-+.+.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI-----i~LiD~F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI-----IELIDVFPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch-----hhhhhhccCCCce
Confidence 579999999999999999999999999999999985432 24567899999999999888 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
-||+||+..+|+..++... ..++...++.++.++++||+|||++.|+||||||.|+||+++|
T Consensus 77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g----------------- 138 (318)
T KOG0659|consen 77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG----------------- 138 (318)
T ss_pred EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC-----------------
Confidence 9999999999999998765 5799999999999999999999999999999999999999888
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||+|||+|+...... ...+-|.+|+|||++.|. .|+..+||||.|||+.||+.|.+.|.|.++.
T Consensus 139 ----------~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi 208 (318)
T KOG0659|consen 139 ----------QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI 208 (318)
T ss_pred ----------cEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH
Confidence 67888888888765443 223679999999999887 7999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhHHH------------------------hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 325 EHLAMMERVLGPLPHHMVI------------------------RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+++..|.+..|...++.|+ ..+..+.+++.+|+.+| |.+|.++.|+++|+||
T Consensus 209 dQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~yn----P~~Rita~qaL~~~yf 284 (318)
T KOG0659|consen 209 DQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYN----PKKRITASQALKHPYF 284 (318)
T ss_pred HHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccC----chhcccHHHHhcchhh
Confidence 9999999988865443333 24566789999999999 9999999999999999
Q ss_pred CcccccC
Q 015222 381 PVIDLYS 387 (411)
Q Consensus 381 ~~~~~~~ 387 (411)
.+.....
T Consensus 285 ~~~P~pt 291 (318)
T KOG0659|consen 285 KSLPLPT 291 (318)
T ss_pred hcCCCCC
Confidence 9855443
No 18
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.1e-51 Score=375.01 Aligned_cols=288 Identities=22% Similarity=0.290 Sum_probs=240.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+.|++++.||.|.-|+||+|+.+.++..+|+|++.+.. ....+++.|-+||+.+.||.+ +.+|..|+.++.
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFl-----PTLYa~fet~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFL-----PTLYASFETDKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCcc-----chhhheeeccce
Confidence 57999999999999999999999999999999998643 334567789999999999988 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.|+||||| ||+|..+++++....+++..++.++..++.||+|||-.|||+|||||+||||.++|++.|+||.++.+...
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999 99999999999989999999999999999999999999999999999999999999999999998776643
Q ss_pred CCCccccCC----CC-CC---eeE----------------eecCC--------cccccCCCcccccCCCccccceecCCC
Q 015222 247 DGSYFKNLP----KS-SA---IKL----------------IDFGS--------TTFEHQDHSYVVSTRHYRAPEVILGLG 294 (411)
Q Consensus 247 ~~~~~~~~~----~~-~~---~kl----------------~Dfg~--------a~~~~~~~~~~~gt~~y~aPE~~~~~~ 294 (411)
........+ .. .. +.+ .|++. |...+.....++||-.|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 221111100 00 00 001 12221 111222334579999999999999999
Q ss_pred CCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHH
Q 015222 295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374 (411)
Q Consensus 295 ~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~i 374 (411)
.+.++|+|+|||++|||+.|..||.|.+..+.+..|......+|... .++..++|+|+++|.+|+++|-..+-.+.||
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 99999999999999999999999999999999999988777787764 6778999999999999944444444449999
Q ss_pred HhcCCCCccccc
Q 015222 375 WKLLRLPVIDLY 386 (411)
Q Consensus 375 l~~~~~~~~~~~ 386 (411)
.+||||++++|.
T Consensus 390 K~HpFF~gVnWa 401 (459)
T KOG0610|consen 390 KRHPFFEGVNWA 401 (459)
T ss_pred hcCccccCCChh
Confidence 999999999986
No 19
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-50 Score=392.58 Aligned_cols=258 Identities=24% Similarity=0.336 Sum_probs=223.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|.+++.||+|+||+|++|..+.+++.+|||++++.. ...+..+.|..|+.... .||.++.++..|+..+
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQTKE 442 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeecccccccCC
Confidence 468999999999999999999999999999999998754 44567788999998886 4456699999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
++|+||||+ ||++..+.+. ..+++..++.++..|+.||+|||++||||||||.+|||+|.+|
T Consensus 443 ~l~fvmey~~Ggdm~~~~~~---~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG-------------- 505 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIHT---DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG-------------- 505 (694)
T ss_pred eEEEEEEecCCCcEEEEEec---ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--------------
Confidence 999999999 8884444333 3699999999999999999999999999999999999999988
Q ss_pred CCCCccccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.+||+|||+++.. +...++++|||.|||||++.+..|+.++|+|||||+|||||.|+.||.+.+
T Consensus 506 -------------h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd 572 (694)
T KOG0694|consen 506 -------------HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD 572 (694)
T ss_pred -------------cEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence 4566666666542 334567899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccccCCCC
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLYSASP 390 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~~~~~ 390 (411)
+.+....|.......|.. ++.++..+++++|.++ |++|.. +.+|.+||||.+|+|.....
T Consensus 573 Eee~FdsI~~d~~~yP~~----ls~ea~~il~~ll~k~----p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~ 637 (694)
T KOG0694|consen 573 EEEVFDSIVNDEVRYPRF----LSKEAIAIMRRLLRKN----PEKRLGSGERDAEDIKKHPFFRSIDWDDLLN 637 (694)
T ss_pred HHHHHHHHhcCCCCCCCc----ccHHHHHHHHHHhccC----cccccCCCCCCchhhhhCCccccCCHHHHhh
Confidence 999999999887777655 4678889999999999 777765 48899999999999865433
No 20
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-51 Score=369.36 Aligned_cols=272 Identities=26% Similarity=0.427 Sum_probs=238.2
Q ss_pred CccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
-.+..+|..++.||+|+||.|..|.++.+|+.||||.+.. .....+...+|+.+|+.++|+|| +.+.+++..
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNI-----i~l~di~~p 92 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENI-----IGLLDIFRP 92 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCc-----ceEEeeccc
Confidence 3456678889999999999999999999999999999862 33456778899999999999988 888888765
Q ss_pred -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
-+.+|+|+|+|+.+|.+.++.+. .++++.+..++.||++||+|+|+.+|+||||||+|+|++.+.
T Consensus 93 ~~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c-------- 162 (359)
T KOG0660|consen 93 PSRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC-------- 162 (359)
T ss_pred ccccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC--------
Confidence 35799999999999999998875 699999999999999999999999999999999999987654
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCccccc-----CCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHh
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt 313 (411)
.+||+|||+|+... ...+..+.|.+|+|||++... .|+.+.||||+|||+.||++
T Consensus 163 -------------------~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~ 223 (359)
T KOG0660|consen 163 -------------------DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLT 223 (359)
T ss_pred -------------------CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHc
Confidence 67999999998874 233567889999999998765 89999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCChhHHH---------------------------hhhhhhhhhhccCCccCCCCCCC
Q 015222 314 GEALFQTHENLEHLAMMERVLGPLPHHMVI---------------------------RADRRAEKYFRRGARLDWPDGAT 366 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~---------------------------~~~~~~~~li~~~l~~~~~~rp~ 366 (411)
|++.|.|.+..+++..|....|..+++... +.++.+.+++.+||..| |.
T Consensus 224 gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd----P~ 299 (359)
T KOG0660|consen 224 GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD----PK 299 (359)
T ss_pred CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC----cc
Confidence 999999999999999988888876654433 34577899999999999 99
Q ss_pred cHHHHHHHHhcCCCCcccccCCCCCchhhHH
Q 015222 367 SRDSMRAVWKLLRLPVIDLYSASPNCLCKFY 397 (411)
Q Consensus 367 ~R~t~~~il~~~~~~~~~~~~~~~~~~~~~~ 397 (411)
+|+|++|+|+|||+........+|.|...|.
T Consensus 300 kRita~eAL~hPYl~~~hdp~dEP~~~~~~~ 330 (359)
T KOG0660|consen 300 KRITAEEALAHPYLAPYHDPEDEPVCQPIFD 330 (359)
T ss_pred ccCCHHHHhcChhhhhhcCCccCCCCCCCCc
Confidence 9999999999999999999999998777554
No 21
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.2e-51 Score=392.39 Aligned_cols=254 Identities=26% Similarity=0.453 Sum_probs=230.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+-|++.+.||.|+-|.|-+|++..||+.+|||++.+. ......+.+|+-||+.+.|||+ ++++++++...+
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV-----l~LydVwe~~~~ 86 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV-----LRLYDVWENKQH 86 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe-----eeeeeeeccCce
Confidence 4589999999999999999999999999999999754 2345667899999999999988 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+|.||+ ||.|++++.+++ .+++.++.+++.||+.|+.|+|..+|+||||||+|+|++..+
T Consensus 87 lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--------------- 149 (786)
T KOG0588|consen 87 LYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--------------- 149 (786)
T ss_pred EEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc---------------
Confidence 99999999 999999999887 899999999999999999999999999999999999987655
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCC-ccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
++||+|||+|.....+ ..+.||++.|+|||++.|.+|+ .++||||+|||||.||||+.||.+.+-
T Consensus 150 ------------nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi 217 (786)
T KOG0588|consen 150 ------------NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI 217 (786)
T ss_pred ------------CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH
Confidence 6899999999876544 3668999999999999999885 899999999999999999999999888
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
...+.++.++...+|. .++.+++++|++||..| |++|.|++||++|||+....-..
T Consensus 218 r~LLlKV~~G~f~MPs----~Is~eaQdLLr~ml~VD----p~~RiT~~eI~kHP~l~g~~~~~ 273 (786)
T KOG0588|consen 218 RVLLLKVQRGVFEMPS----NISSEAQDLLRRMLDVD----PSTRITTEEILKHPFLSGYTSLP 273 (786)
T ss_pred HHHHHHHHcCcccCCC----cCCHHHHHHHHHHhccC----ccccccHHHHhhCchhhcCCCCC
Confidence 8999999998888884 46788999999999999 99999999999999998765433
No 22
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-52 Score=360.34 Aligned_cols=281 Identities=23% Similarity=0.330 Sum_probs=244.7
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.+.|++.+.||+|.|+.|+++.+..+|+.+|+|+++. .....+.+.+|+.|-+.|+||+| +++.+.+...
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~I-----vrL~~ti~~~ 82 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQEE 82 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcE-----eehhhhhccc
Confidence 356789999999999999999999999999999999863 23456788999999999999888 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+..|+|+|++ |++|..-+-.+. .+++..+-.+++||+.||.|+|.+||||||+||+|+|+.+..
T Consensus 83 ~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~------------- 147 (355)
T KOG0033|consen 83 SFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKA------------- 147 (355)
T ss_pred ceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeecc-------------
Confidence 9999999999 999976555443 689999999999999999999999999999999999997643
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
+.--+||+|||+|....... ...+|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+
T Consensus 148 -----------~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~ 216 (355)
T KOG0033|consen 148 -----------KGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED 216 (355)
T ss_pred -----------CCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc
Confidence 44579999999998766332 34689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC------CCCchhhH
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA------SPNCLCKF 396 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~------~~~~~~~~ 396 (411)
....++.|.+....+|...+..+++++++++++||..| |++|.|+.|+|+|||+++-.-.+. .-+|+.+|
T Consensus 217 ~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~d----P~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkf 292 (355)
T KOG0033|consen 217 QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVN----PKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKF 292 (355)
T ss_pred HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccC----hhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHh
Confidence 99999999999999999889999999999999999999 999999999999999997543322 22355666
Q ss_pred HHHHHHHh
Q 015222 397 YAITHCLL 404 (411)
Q Consensus 397 ~~~~~~~~ 404 (411)
-+....+.
T Consensus 293 NarRKLKg 300 (355)
T KOG0033|consen 293 NARRKLKG 300 (355)
T ss_pred hHHHHHHH
Confidence 55554443
No 23
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.9e-51 Score=384.75 Aligned_cols=253 Identities=25% Similarity=0.390 Sum_probs=222.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.. +..+.+.+|++|++.++|+|| +.++++|+...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpni-----v~m~esfEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNI-----VEMLESFETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcch-----hhHHHhhcccceE
Confidence 57999999999999999999999999999999997544 344667899999999999988 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
|+|+||+-|+|..++...+ .++|+.++.++.|++.||.|||+.+|+|||+||.|||++..|
T Consensus 77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~----------------- 137 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG----------------- 137 (808)
T ss_pred EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC-----------------
Confidence 9999999669999999876 799999999999999999999999999999999999987766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+|+||||+|+...... +...|||.|||||+..+++|+..+|+||||||+|||++|++||...+-.+
T Consensus 138 ----------~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~ 207 (808)
T KOG0597|consen 138 ----------TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQ 207 (808)
T ss_pred ----------ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 77888888888765543 34689999999999999999999999999999999999999998766666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
..+.|.......|. ..+..+.+|++.+|.+| |.+|.++-+++.|+|.+.....
T Consensus 208 Lv~~I~~d~v~~p~----~~S~~f~nfl~gLL~kd----P~~RltW~~Ll~HpF~k~~~~~ 260 (808)
T KOG0597|consen 208 LVKSILKDPVKPPS----TASSSFVNFLQGLLIKD----PAQRLTWTDLLGHPFWKGKINI 260 (808)
T ss_pred HHHHHhcCCCCCcc----cccHHHHHHHHHHhhcC----hhhcccHHHHhcChHHhhhhhh
Confidence 66666654444443 56778999999999999 9999999999999998864433
No 24
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-49 Score=379.69 Aligned_cols=266 Identities=29% Similarity=0.443 Sum_probs=241.0
Q ss_pred CCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHHHHh-cCCCCCcceEEEeee
Q 015222 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW 161 (411)
Q Consensus 87 ~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~ 161 (411)
...+...|++.+.||+|.||.||+|+++.+|+.+|+|++.+... ..+.+.+|+.+|+++. |+|+ +.+++.
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpni-----v~l~~~ 104 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNI-----VQLKDA 104 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCE-----EEEEEE
Confidence 34566789999999999999999999999999999999975432 3468899999999998 7766 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
|++...+++|||+| ||.|.+.+... .+++..+..++.||+.|++|||+.||+||||||+|+|+....
T Consensus 105 ~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~--------- 172 (382)
T KOG0032|consen 105 FEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD--------- 172 (382)
T ss_pred EEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc---------
Confidence 99999999999999 99999999887 299999999999999999999999999999999999997643
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccC--CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
+.+..++++|||++..... .....+||+.|+|||++.+..|+..+||||+||++|.|++|.+||
T Consensus 173 --------------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF 238 (382)
T KOG0032|consen 173 --------------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPF 238 (382)
T ss_pred --------------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCC
Confidence 1235899999999998776 345689999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
.+.+.......+.+....++...+..++..++++++++|..| |.+|+++.++|+|||+.+.....
T Consensus 239 ~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~d----p~~R~ta~~~L~HpWi~~~~~~~ 303 (382)
T KOG0032|consen 239 WGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFD----PRKRLTAAQALQHPWIKSIGEAT 303 (382)
T ss_pred cCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccC----cccCCCHHHHhcCccccCCcccc
Confidence 999999999999998889999999999999999999999999 99999999999999999864433
No 25
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.3e-50 Score=358.73 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=226.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--C
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--R 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~ 165 (411)
.+.|+.+.+|++|+||.||+|+++.|++.||+|.++-.. ...-...+|+.+|.+++|+|| |.+.++... -
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NI-----V~vkEVVvG~~~ 149 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNI-----VEVKEVVVGSNM 149 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCe-----eeeEEEEecccc
Confidence 467999999999999999999999999999999997443 233446789999999999888 888887764 3
Q ss_pred CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
+.+|+|||||..+|..++.... +.+...+++.++.|+++||+|||.+.|+|||||++|+|+.+.|
T Consensus 150 d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G-------------- 214 (419)
T KOG0663|consen 150 DKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKG-------------- 214 (419)
T ss_pred ceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCC--------------
Confidence 5799999999999999998776 6799999999999999999999999999999999999998887
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.+||+|||+|+..+.. .+..+-|.+|+|||++.+. .|++++|+||+|||+.||+++++.|.|.
T Consensus 215 -------------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~ 281 (419)
T KOG0663|consen 215 -------------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK 281 (419)
T ss_pred -------------cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC
Confidence 6789999999887766 4556789999999999987 7999999999999999999999999999
Q ss_pred ChHHHHHHHHHHhCCCChhHHHh----------------------------hhhhhhhhhccCCccCCCCCCCcHHHHHH
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIR----------------------------ADRRAEKYFRRGARLDWPDGATSRDSMRA 373 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~----------------------------~~~~~~~li~~~l~~~~~~rp~~R~t~~~ 373 (411)
++.+++.+|.+..+.....+++. +++..-++++.+|.+| |.+|.|+.+
T Consensus 282 sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~d----P~kR~tA~~ 357 (419)
T KOG0663|consen 282 SEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYD----PGKRITAED 357 (419)
T ss_pred chHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccC----ccccccHHH
Confidence 99999999999888655544332 3366778999999999 999999999
Q ss_pred HHhcCCCCcccc
Q 015222 374 VWKLLRLPVIDL 385 (411)
Q Consensus 374 il~~~~~~~~~~ 385 (411)
.|+|.||.+...
T Consensus 358 ~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 358 GLKHEYFRETPL 369 (419)
T ss_pred hhcccccccCCC
Confidence 999999998554
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-49 Score=363.56 Aligned_cols=267 Identities=22% Similarity=0.292 Sum_probs=226.5
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.+.|++.+.||.|.-++||+|+...+++.||||++.-.+ ...+.+.+|+..++.++|||| +.++..|..+..+
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNI-----v~~~~sFvv~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNI-----VTYHCSFVVDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCc-----ceEEEEEEeccee
Confidence 357999999999999999999999999999999997433 345788999999999999988 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||.|| +|++.+++...-...++|..+..|++++++||.|||.+|-||||||+.||||+++|.+||+|||.+
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvs------ 173 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVS------ 173 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceee------
Confidence 9999999 999999999776677999999999999999999999999999999999999999998888777753
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
..|.|-|..... ...+++||+.|||||++... .|+.|+||||||++..||.+|..||.......
T Consensus 174 ------------a~l~~~G~R~~~--rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk 239 (516)
T KOG0582|consen 174 ------------ASLFDSGDRQVT--RFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK 239 (516)
T ss_pred ------------eeecccCceeeE--eeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH
Confidence 344454411111 11567999999999996543 79999999999999999999999999887776
Q ss_pred HHHHHHHHhC------CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLG------PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~------~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.+..-.+... .++.+.....+..++.++..||.+| |++|||+.++++|+||+.....
T Consensus 240 vLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kD----P~kRptAskLlkh~FFk~~k~~ 302 (516)
T KOG0582|consen 240 VLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKD----PSKRPTASKLLKHAFFKKAKSK 302 (516)
T ss_pred HHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcC----cccCCCHHHHhccHHHhhccch
Confidence 6544333222 2345556677788999999999999 9999999999999999986643
No 27
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.5e-49 Score=371.42 Aligned_cols=253 Identities=24% Similarity=0.321 Sum_probs=220.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++++.|+|| +++++++.+.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI-----IRLFWTEHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcH-----hhhHhhhccCCe
Confidence 36999999999999999999999999999999986432 234567889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--------------- 138 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--------------- 138 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC---------------
Confidence 99999999 999999998765 699999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus 139 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~ 206 (291)
T cd05612 139 ------------HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI 206 (291)
T ss_pred ------------CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 67888888887665555556799999999999998999999999999999999999999998887777
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCccccc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~ 386 (411)
...+......+|.. .+..++++|.+||..| |.+|+ +++++++|+||..+++.
T Consensus 207 ~~~i~~~~~~~~~~----~~~~~~~li~~~l~~d----p~~R~~~~~~~~~~~l~h~~~~~~~~~ 263 (291)
T cd05612 207 YEKILAGKLEFPRH----LDLYAKDLIKKLLVVD----RTRRLGNMKNGADDVKNHRWFKSVDWD 263 (291)
T ss_pred HHHHHhCCcCCCcc----CCHHHHHHHHHHcCCC----HHHccCCccCCHHHHhcCccccCCCHH
Confidence 77776655455443 4678899999999999 77777 59999999999987654
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-50 Score=368.90 Aligned_cols=255 Identities=30% Similarity=0.434 Sum_probs=210.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC--eE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--HI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--~~ 168 (411)
.+|...+.||+|+||+||++.+..+|+..|||.+.... ...+.+.+|+.+|.+++|++| |++++...... .+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~I-----V~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNI-----VQYYGSSSSRENDEY 91 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCE-----EeeCCccccccCeee
Confidence 45888899999999999999999999999999986542 124568899999999998777 99999755444 69
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~-~~~~~l~df~~~~~~~~ 246 (411)
+++|||+ +|+|.+++.+.++ .+++..++.+++||++||.|||++|||||||||+|||++. ++
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--------------- 155 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--------------- 155 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC---------------
Confidence 9999999 9999999999876 7999999999999999999999999999999999999987 45
Q ss_pred CCCccccCCCCCCeeEeecCCcccccC------CCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.+||+|||.+..... ......||+.|||||++.++ ...+++|||||||++.||+||+.||.
T Consensus 156 ------------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 156 ------------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred ------------eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence 567777776654431 12346899999999999963 34469999999999999999999998
Q ss_pred CC-ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 320 TH-ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 320 ~~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.. ...+.+..+.... ..| .+...+++.+++||.+|+..+ |..|||+.++|+|||+.+...
T Consensus 224 ~~~~~~~~~~~ig~~~-~~P-~ip~~ls~~a~~Fl~~C~~~~----p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 224 EFFEEAEALLLIGRED-SLP-EIPDSLSDEAKDFLRKCFKRD----PEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred hhcchHHHHHHHhccC-CCC-CCCcccCHHHHHHHHHHhhcC----cccCcCHHHHhhChhhhcccc
Confidence 73 3333333333222 233 555668899999999999999 999999999999999987554
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9e-49 Score=380.03 Aligned_cols=285 Identities=22% Similarity=0.304 Sum_probs=221.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||+||+|+++.+++.||||++++.. .....+.+|+.++..+.|++| +++++.+.+.+.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~i-----v~~~~~~~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWV-----VKMFYSFQDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCCe
Confidence 46999999999999999999999999999999997532 233567789999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999 999999998765 799999999999999999999999999999999999999999888888887664432
Q ss_pred CCCccccCCCCCCeeEeecCCcccc------------cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFE------------HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 314 (411)
...... ..........|+...... .......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 154 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 154 AHRTEF-YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred cccccc-cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 111000 000000011121111100 0011235799999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 315 EALFQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
+.||.+.+..+....+..... .+|.. ..+++.++++|.+++. +|.+ +..||+++++++||||.++++...
T Consensus 233 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~~-~~~~-r~~r~~~~ei~~hp~f~~~~~~~~ 304 (363)
T cd05628 233 YPPFCSETPQETYKKVMNWKETLIFPPE--VPISEKAKDLILRFCC-EWEH-RIGAPGVEEIKTNPFFEGVDWEHI 304 (363)
T ss_pred CCCCCCCCHHHHHHHHHcCcCcccCCCc--CCCCHHHHHHHHHHcC-Chhh-cCCCCCHHHHhCCCCCCCCCHHHH
Confidence 999998887777776665322 23332 2367789999998764 4444 445899999999999999877554
No 30
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-50 Score=380.53 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=224.4
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh-hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..+|...++||+|+.|.||.|+...+++.||||.+..... ..+-+.+|+.+|+..+|+|| |.+++.|-..+.+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~Ni-----Vnfl~Sylv~deLW 346 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNI-----VNFLDSYLVGDELW 346 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHH-----HHHHHHhcccceeE
Confidence 4579999999999999999999999999999999986543 34567899999999999988 99999998889999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ ||+|.|.+.... ++|.++..|++++++||+|||.+||+|||||.+|||++.+|
T Consensus 347 VVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g----------------- 406 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG----------------- 406 (550)
T ss_pred EEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC-----------------
Confidence 999999 999999998764 99999999999999999999999999999999999998887
Q ss_pred CccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||++..... ...+.+|||+|||||+.....|++++||||||++++||+.|++||-..+...
T Consensus 407 ----------~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr 476 (550)
T KOG0578|consen 407 ----------SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 476 (550)
T ss_pred ----------cEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH
Confidence 567777776655433 3466899999999999999999999999999999999999999998777766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.+..|.. .+.........++..+++||.+||..| +.+|+++.++|+||||+....
T Consensus 477 AlyLIa~-ng~P~lk~~~klS~~~kdFL~~cL~~d----v~~RasA~eLL~HpFl~~a~p 531 (550)
T KOG0578|consen 477 ALYLIAT-NGTPKLKNPEKLSPELKDFLDRCLVVD----VEQRASAKELLEHPFLKMAKP 531 (550)
T ss_pred HHHHHhh-cCCCCcCCccccCHHHHHHHHHHhhcc----hhcCCCHHHHhcChhhhhcCC
Confidence 6665544 456666667788999999999999999 999999999999999965443
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=9.7e-49 Score=374.76 Aligned_cols=253 Identities=25% Similarity=0.348 Sum_probs=219.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|+++.+++.||+|+++... ...+.+.+|+.+++++.|+|| +++++.+.+++.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-----VNMMCSFQDENR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CcEEEEEEcCCE
Confidence 57999999999999999999999999999999997532 234567889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--------------- 155 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--------------- 155 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC---------------
Confidence 99999999 999999998765 689999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.
T Consensus 156 ------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~ 223 (329)
T PTZ00263 156 ------------HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI 223 (329)
T ss_pred ------------CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH
Confidence 67888888887665555556899999999999999999999999999999999999999988877776
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCccccc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~ 386 (411)
...+......+|. ..+..++++|.+||..| |.+|+ +++++++||||.+.++.
T Consensus 224 ~~~i~~~~~~~p~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~ll~hp~f~~~~~~ 280 (329)
T PTZ00263 224 YEKILAGRLKFPN----WFDGRARDLVKGLLQTD----HTKRLGTLKGGVADVKNHPYFHGANWD 280 (329)
T ss_pred HHHHhcCCcCCCC----CCCHHHHHHHHHHhhcC----HHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence 6666654444443 35677899999999999 66665 48999999999986544
No 32
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-49 Score=365.04 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=215.1
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---------------hhhHHHHHHHHHHHHHhcCCCCCc
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------------KYREAAMIEIDVLQRLARHDIGGT 153 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---------------~~~~~~~~E~~~l~~l~~~~i~~~ 153 (411)
...+.|++++.||+|.||.|-+|++..+++.||||++.+.. ...+...+|+.||+++.|+|+
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV--- 170 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV--- 170 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe---
Confidence 44578999999999999999999999999999999996432 123578899999999999887
Q ss_pred ceEEEeeeeec--CCeEEEEEccC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 154 RCVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 154 ~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~-l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
|+++++..+ .+.+|||+||| .|.+... ..... +++.+++.++++++.||+|||.+|||||||||+|+||++
T Consensus 171 --V~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 171 --VKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSS 245 (576)
T ss_pred --eEEEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcC
Confidence 999999987 46899999999 7765432 22223 899999999999999999999999999999999999998
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC--------CcccccCCCccccceecCCC----CCc
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--------HSYVVSTRHYRAPEVILGLG----WNY 297 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~----~~~ 297 (411)
+| ++||+|||.+...... ....+|||.|+|||.+.++. .+.
T Consensus 246 ~g---------------------------~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~ 298 (576)
T KOG0585|consen 246 DG---------------------------TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGF 298 (576)
T ss_pred CC---------------------------cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccch
Confidence 88 5666667766543211 12268999999999998742 358
Q ss_pred cchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 298 PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 298 ~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.||||+||+||.|+.|+.||-+....+...+|......+|.. +.+.+.++++|.+||.+| |++|.++.+|..|
T Consensus 299 a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~Kd----P~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 299 ALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKD----PEQRITLPDIKLH 372 (576)
T ss_pred hhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcC----hhheeehhhheec
Confidence 9999999999999999999999999999999998877777664 356788999999999999 9999999999999
Q ss_pred CCCCcc
Q 015222 378 LRLPVI 383 (411)
Q Consensus 378 ~~~~~~ 383 (411)
||...-
T Consensus 373 pwvt~~ 378 (576)
T KOG0585|consen 373 PWVTRD 378 (576)
T ss_pred ceeccC
Confidence 999864
No 33
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-50 Score=342.93 Aligned_cols=252 Identities=24% Similarity=0.374 Sum_probs=229.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|++.+.||+|-||.||+|+.+.++..||+|++-++. .....+.+|++|.+.|+|||| .+++++|.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpni-----lrlY~~fhd~~ 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNI-----LRLYGYFHDSK 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccH-----Hhhhhheeccc
Confidence 367999999999999999999999999999999997543 334667889999999988888 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+++||. .|+|+..|+......+++..+..++.|++.||.|+|.++||||||||+|+|++.+|
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~-------------- 161 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG-------------- 161 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--------------
Confidence 999999999 99999999976666899999999999999999999999999999999999998877
Q ss_pred CCCCccccCCCCCCeeEeecCCccccc-CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||+|||.+.... ....+.+||..|.+||+..+..++..+|+|++|++.||++.|.+||...+..
T Consensus 162 -------------~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~ 228 (281)
T KOG0580|consen 162 -------------ELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS 228 (281)
T ss_pred -------------CeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH
Confidence 67888999887764 4456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
+.++.|.+....+|. .++..+.++|.+|+.++ |..|.+..++++|||+..
T Consensus 229 etYkrI~k~~~~~p~----~is~~a~dlI~~ll~~~----p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 229 ETYKRIRKVDLKFPS----TISGGAADLISRLLVKN----PIERLALTEVMDHPWIVA 278 (281)
T ss_pred HHHHHHHHccccCCc----ccChhHHHHHHHHhccC----ccccccHHHHhhhHHHHh
Confidence 999999999888884 46788999999999999 999999999999999864
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-48 Score=365.11 Aligned_cols=264 Identities=21% Similarity=0.309 Sum_probs=216.1
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++++.|+++ +.+++.+.+++..+
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----v~~~~~~~~~~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFV-----VSLAYAYETKDALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcE-----EEEEEEEccCCeEE
Confidence 889999999999999999999999999999986432 223456789999999988776 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~----------------- 139 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG----------------- 139 (285)
T ss_pred EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC-----------------
Confidence 999999 89999888765445699999999999999999999999999999999999997665
Q ss_pred CccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...... .....||..|+|||++.+..++.++|||||||++|||++|+.||.+.+....
T Consensus 140 ----------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~ 209 (285)
T cd05631 140 ----------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK 209 (285)
T ss_pred ----------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh
Confidence 5788888877654322 2335789999999999999999999999999999999999999987655433
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccccCCCCCch
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLYSASPNCL 393 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~~~~~~~~ 393 (411)
...+.......+..+....+..+.+++++||+.| |.+|++ +.++++|+||.++++....-+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~----P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~ 277 (285)
T cd05631 210 REEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKN----PKERLGCRGNGAAGVKQHPIFKNINFKRLEANML 277 (285)
T ss_pred HHHHHHHhhcccccCCccCCHHHHHHHHHHhhcC----HHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcC
Confidence 3333332222223334456788999999999999 666664 99999999999988766554433
No 35
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-47 Score=353.17 Aligned_cols=308 Identities=32% Similarity=0.571 Sum_probs=254.8
Q ss_pred CCCCCCceEEeeCCccC-CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCC---C
Q 015222 75 PDDKDGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---I 150 (411)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~---i 150 (411)
....+|++++.+|+.|. +||.+.++||.|.|++||+|.|..+.+.||+|+.+....+.+....|+.+|++++... .
T Consensus 60 dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 60 DYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred hhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 34557899999999999 9999999999999999999999999999999999998889999999999999998654 3
Q ss_pred CCcceEEEeeeeec----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcE
Q 015222 151 GGTRCVQIRNWFDY----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENI 225 (411)
Q Consensus 151 ~~~~iv~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NI 225 (411)
+..+||++++.|.. +.|+|+|+|++|.+|..+|....++.++...++.|++||+.||.|||. .||||.||||+||
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENv 219 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENV 219 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCccee
Confidence 34578999999986 459999999999999999999998999999999999999999999997 5999999999999
Q ss_pred EEecCcc-c-c-----------c------------------------CCc------------------------------
Q 015222 226 LLVSAEY-V-K-----------V------------------------PDY------------------------------ 238 (411)
Q Consensus 226 li~~~~~-~-~-----------l------------------------~df------------------------------ 238 (411)
|+..... + + + .++
T Consensus 220 Ll~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~ 299 (590)
T KOG1290|consen 220 LLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPN 299 (590)
T ss_pred eeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhccccccccccc
Confidence 9954310 0 0 0 000
Q ss_pred ----------ccc----cccC----------CCC---C---------------------------ccc------------
Q 015222 239 ----------KFL----SRSS----------KDG---S---------------------------YFK------------ 252 (411)
Q Consensus 239 ----------~~~----~~~~----------~~~---~---------------------------~~~------------ 252 (411)
+.. .... ..+ + ...
T Consensus 300 ~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~ 379 (590)
T KOG1290|consen 300 QESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPL 379 (590)
T ss_pred ccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccc
Confidence 000 0000 000 0 000
Q ss_pred ------cCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC-----
Q 015222 253 ------NLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH----- 321 (411)
Q Consensus 253 ------~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~----- 321 (411)
.-....++||+|||-|.+.....+.-+.|..|+|||++.|..|++.+||||++|++|||+||...|...
T Consensus 380 v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y 459 (590)
T KOG1290|consen 380 VNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENY 459 (590)
T ss_pred cCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCC
Confidence 011235799999999999888888788999999999999999999999999999999999999999754
Q ss_pred -ChHHHHHHHHHHhCCCChhHHH--------------------------------------hhhhhhhhhhccCCccCCC
Q 015222 322 -ENLEHLAMMERVLGPLPHHMVI--------------------------------------RADRRAEKYFRRGARLDWP 362 (411)
Q Consensus 322 -~~~~~~~~i~~~~~~~p~~~~~--------------------------------------~~~~~~~~li~~~l~~~~~ 362 (411)
.+.++++.|.+.++.+|..+.. .....+.+||.-||+.+
T Consensus 460 ~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~-- 537 (590)
T KOG1290|consen 460 SRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFD-- 537 (590)
T ss_pred CccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcC--
Confidence 3578999999999988876533 12356789999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCccccc
Q 015222 363 DGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 363 ~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
|.+|+|+.+.|+|||+..+...
T Consensus 538 --PeKR~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 538 --PEKRPTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred --ccccccHHHHhcCccccCCCCC
Confidence 9999999999999999977653
No 36
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-47 Score=360.47 Aligned_cols=252 Identities=29% Similarity=0.463 Sum_probs=212.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.++||.|+||+||+|++..+++.||+|+++... .....+.+|+.++++++|+|+ +++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-----VTLHDIIHTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-----eeEEEEEcCCCeEE
Confidence 57999999999999999999999999999999987432 234567789999999988877 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||+.++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 80 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~------------------ 140 (288)
T cd07871 80 LVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG------------------ 140 (288)
T ss_pred EEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC------------------
Confidence 999999779999987654 3589999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+
T Consensus 141 ---------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~ 211 (288)
T cd07871 141 ---------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE 211 (288)
T ss_pred ---------CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5677777766543221 223467999999999876 468999999999999999999999999988877
Q ss_pred HHHHHHHHhCCCChhHHH--------------------------hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 326 HLAMMERVLGPLPHHMVI--------------------------RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~--------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
.+..+.+..+..+...++ ..+..+.++|.+||..| |.+|+|++|+++|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d----p~~R~t~~~~l~hp~ 287 (288)
T cd07871 212 ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYE----TKSRISAEAALRHSY 287 (288)
T ss_pred HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcC----cccCCCHHHHhcCCC
Confidence 777776665544333221 24567889999999999 999999999999999
Q ss_pred C
Q 015222 380 L 380 (411)
Q Consensus 380 ~ 380 (411)
|
T Consensus 288 f 288 (288)
T cd07871 288 F 288 (288)
T ss_pred C
Confidence 7
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.4e-48 Score=370.35 Aligned_cols=259 Identities=24% Similarity=0.363 Sum_probs=220.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCC-cEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~-~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.++|++.+.||+|+||.||+|.++.++ ..||+|++.... ...+.+.+|+.+++.++|+|| +++++++.++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC-----VNLYGSFKDE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCC-----cceEEEEEeC
Confidence 467999999999999999999876655 689999986432 334567789999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+.+|+||||+ +++|.+++.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~------------- 168 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG------------- 168 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC-------------
Confidence 9999999999 999999998765 699999999999999999999999999999999999997766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++...........||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..
T Consensus 169 --------------~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 234 (340)
T PTZ00426 169 --------------FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL 234 (340)
T ss_pred --------------CEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH
Confidence 678888888776655555668999999999999988999999999999999999999999988777
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCC-CcHHHHHHHHhcCCCCcccccC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA-TSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp-~~R~t~~~il~~~~~~~~~~~~ 387 (411)
.....+......+|. ..+..+.++|++||+.++.+|+ ..|++++++++||||.++++..
T Consensus 235 ~~~~~i~~~~~~~p~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~ 294 (340)
T PTZ00426 235 LIYQKILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVS 294 (340)
T ss_pred HHHHHHhcCCCCCCC----CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 766666655444443 3567789999999999955553 2346999999999999887543
No 38
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=6.2e-48 Score=369.88 Aligned_cols=256 Identities=25% Similarity=0.368 Sum_probs=218.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|++..+++.||||+++... .....+.+|+.++..+.|++| +++++++...+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL-----VKLLYAFQDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEcCCE
Confidence 46999999999999999999999999999999997532 234567789999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.|+||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--------------- 138 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--------------- 138 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC---------------
Confidence 99999999 999999998765 689999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.+||+|||++...........||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.
T Consensus 139 ------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~ 206 (333)
T cd05600 139 ------------HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET 206 (333)
T ss_pred ------------CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH
Confidence 67888888887665545556899999999999999999999999999999999999999998877776
Q ss_pred HHHHHHHhCCC--Ch--hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 327 LAMMERVLGPL--PH--HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 327 ~~~i~~~~~~~--p~--~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
...+......+ |. .....++..+.++|.+||..+ |.+|+++.++++|+||.++.+
T Consensus 207 ~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~----~~rr~s~~~ll~h~~~~~~~~ 265 (333)
T cd05600 207 WENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDP----SRRFGSLEDIKNHPFFKEVDW 265 (333)
T ss_pred HHHHHhccccccCCCCCccccccCHHHHHHHHHHhhCh----hhhcCCHHHHHhCcccCCCCH
Confidence 66655432211 11 111245778999999998876 999999999999999998754
No 39
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.8e-48 Score=352.03 Aligned_cols=260 Identities=29% Similarity=0.469 Sum_probs=224.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHhcCC-CCCcceEEEeeeeecCC-
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRN- 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~~~~-i~~~~iv~~~~~~~~~~- 166 (411)
..|+.+++||+|+||+||+|+++.+|+.||+|.++.... ......+|+.+++.|+|+| | +.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~i-----v~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHI-----VRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcce-----EEEEeeeeeccc
Confidence 458888999999999999999999999999999985443 4566789999999999987 5 99999998876
Q ss_pred -----eEEEEEccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 167 -----HICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 167 -----~~~lv~e~~~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
.+++||||+..+|.+++..... ..++...++.++.||+.||+|||++||+||||||.||||+++|
T Consensus 86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G-------- 157 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSG-------- 157 (323)
T ss_pred ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCC--------
Confidence 8999999999999999987653 3688899999999999999999999999999999999998877
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~ 315 (411)
.+||+|||+|+...-. .+..++|..|+|||++.+. .|+..+||||+|||++||++++
T Consensus 158 -------------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 158 -------------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred -------------------cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC
Confidence 6788888888765422 2345789999999999998 7999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhHHHh--------------------------hhhhhhhhhccCCccCCCCCCCcHH
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHMVIR--------------------------ADRRAEKYFRRGARLDWPDGATSRD 369 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~--------------------------~~~~~~~li~~~l~~~~~~rp~~R~ 369 (411)
..|.+.++.+++..|-+..+......++. .+....+++.+||..+ |.+|.
T Consensus 219 ~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~----p~~R~ 294 (323)
T KOG0594|consen 219 PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYD----PAKRI 294 (323)
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccC----cccCc
Confidence 99999999999999998887654332221 1237888999999999 99999
Q ss_pred HHHHHHhcCCCCcccccC
Q 015222 370 SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 370 t~~~il~~~~~~~~~~~~ 387 (411)
+++.++.|+||.....+.
T Consensus 295 Sa~~al~h~yf~~~~~~~ 312 (323)
T KOG0594|consen 295 SAKGALTHPYFSELPEKS 312 (323)
T ss_pred CHHHHhcChhhcccccch
Confidence 999999999999876543
No 40
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-48 Score=374.18 Aligned_cols=283 Identities=23% Similarity=0.337 Sum_probs=218.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||+||+|++..+++.||||+++... .....+.+|+.+++.++|++| +++++++.++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWV-----VKLYYSFQDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCe
Confidence 46999999999999999999999999999999997532 234556789999999988777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999 999999998765 699999999999999999999999999999999999999999888888887654432
Q ss_pred CCCc--cccCCCCCCeeEeecCCcccccC------------CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 247 DGSY--FKNLPKSSAIKLIDFGSTTFEHQ------------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 247 ~~~~--~~~~~~~~~~kl~Dfg~a~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
.... +.........-..++........ .....+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 2110 00000000000011111110000 011247999999999999989999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH---HHHHHhcCCCCccccc
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t---~~~il~~~~~~~~~~~ 386 (411)
+|..||.+.+..+....+......++......+++.+.++|.+|+. + |.+|++ +.++++|+||.++++.
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~----p~~R~~~~~~~~ll~h~~~~~~~~~ 305 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-E----AERRLGNNGVNEIKSHPFFKGVDWE 305 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-C----HhhcCCCCCHHHHhcCCCcCCCCHH
Confidence 9999999888776666555433222211112457789999999985 7 666665 9999999999987653
No 41
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-49 Score=343.58 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=229.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---------hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW 161 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~ 161 (411)
-.+|.-.+.||.|..++|-++.++.+|..+|+|++... ....+....|+.||+++. +||+|+.+.++
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~----GHP~II~l~D~ 91 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM----GHPYIIDLQDV 91 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc----CCCcEEEeeee
Confidence 35788889999999999999999999999999999521 123455678999999985 45666999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
|+....+++|+|.| .|.|+|+|...- .+++...++|++|++.|++|||.++||||||||+|||++++.
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--------- 160 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--------- 160 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc---------
Confidence 99999999999999 999999999876 799999999999999999999999999999999999986654
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecC------CCCCccchhHHHHHHHHHHH
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG------LGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~------~~~~~~~DiwSlGvil~ell 312 (411)
+++|+|||+|....... ...+|||.|+|||.+.. ..|+..+|+||+|||+|.|+
T Consensus 161 ------------------~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 161 ------------------NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred ------------------ceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHH
Confidence 78889999888765544 45799999999999863 26899999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.|.+||-.....-.+..|..+...+....|.+++..++++|.++|+.| |++|.|++|+|+||||..+...
T Consensus 223 aGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVd----p~~Ritake~LaHpff~q~~~~ 292 (411)
T KOG0599|consen 223 AGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVD----PTKRITAKEALAHPFFIQIAQQ 292 (411)
T ss_pred cCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeC----chhcccHHHHhcChHHHHHHHh
Confidence 999999888888888999999999999999999999999999999999 9999999999999999665543
No 42
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.3e-47 Score=360.03 Aligned_cols=257 Identities=27% Similarity=0.413 Sum_probs=208.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.++||+|+||.||+|+++.+++.||||+++... .....+.+|+.+++.+.|+|+ +++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~ 79 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-----VLLHDIIHTKETLT 79 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-----CeEEEEEecCCeEE
Confidence 67999999999999999999999999999999987432 223456789999999988887 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|
T Consensus 80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~------------------ 140 (303)
T cd07869 80 LVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG------------------ 140 (303)
T ss_pred EEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence 999999889999887654 3689999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh-H
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-L 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~-~ 324 (411)
.+||+|||++...... .....||+.|+|||++.+. .++.++|||||||++|+|++|..||.+..+ .
T Consensus 141 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~ 211 (303)
T cd07869 141 ---------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQ 211 (303)
T ss_pred ---------CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 5677777766543221 2234689999999998764 688999999999999999999999987544 3
Q ss_pred HHHHHHHHHhCCCChh-----------------------HHH-----hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 325 EHLAMMERVLGPLPHH-----------------------MVI-----RADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~-----------------------~~~-----~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+..+....+..... +.. ..+..+.+++.+||+.| |.+|+|++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d----p~~R~s~~~~l~ 287 (303)
T cd07869 212 DQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF----PKNRLSAQAALS 287 (303)
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC----chhccCHHHHhc
Confidence 3444443332221110 000 12356889999999999 999999999999
Q ss_pred cCCCCcccc
Q 015222 377 LLRLPVIDL 385 (411)
Q Consensus 377 ~~~~~~~~~ 385 (411)
|+||.++.+
T Consensus 288 h~~f~~~~~ 296 (303)
T cd07869 288 HEYFSDLPP 296 (303)
T ss_pred CcccccCCh
Confidence 999998764
No 43
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.6e-47 Score=356.73 Aligned_cols=252 Identities=30% Similarity=0.570 Sum_probs=210.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.+.||+|+||.||+|+++.+++.||+|+++... ...+.+.+|+.+++.++|+|+ +++++++..++..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI-----VELKEAFRRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccc-----cchhhhEecCCEE
Confidence 47999999999999999999999999999999997532 334567789999999998887 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++||||+.+++.+.+.... ..+++..++.++.||+.||.|||+.||+||||||+||+++.++
T Consensus 76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~----------------- 137 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND----------------- 137 (287)
T ss_pred EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-----------------
Confidence 9999999445545554432 3699999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 138 ----------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~ 207 (287)
T cd07848 138 ----------VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI 207 (287)
T ss_pred ----------cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 5677777777654321 12346899999999999989999999999999999999999999988777
Q ss_pred HHHHHHHHHhCCCChhHH----------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 325 EHLAMMERVLGPLPHHMV----------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~----------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+..+....++.|.... ...+..+.+++.+||+.| |++|+|++++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~----P~~R~s~~~~l~ 283 (287)
T cd07848 208 DQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLN----PTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCC----cccCCCHHHHhc
Confidence 776666666555443221 124667899999999999 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
||||
T Consensus 284 hp~f 287 (287)
T cd07848 284 HPAF 287 (287)
T ss_pred CCCC
Confidence 9997
No 44
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-48 Score=357.13 Aligned_cols=250 Identities=27% Similarity=0.443 Sum_probs=225.4
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
++..+|++.+.||+|.||.|-+|.+...|+.||||.++++. ...-.+.+|++|++.|+||+| +.++++|+.
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhI-----I~IyEVFEN 124 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHI-----IQIYEVFEN 124 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCce-----eehhhhhcC
Confidence 45678999999999999999999999999999999998643 334456789999999999988 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
.+.+.|||||. +|.|+||+...+ .|++.+++.+++||.+|+.|+|.++++|||||.+|||++.++
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~------------ 190 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN------------ 190 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC------------
Confidence 99999999999 999999999887 799999999999999999999999999999999999987665
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCC-CccchhHHHHHHHHHHHhCCCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
++||+|||++....... .+++|++.|.+||++.|.+| ++.+|-|||||+||.|+.|..||.+
T Consensus 191 ---------------NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 191 ---------------NIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred ---------------CeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 78999999988765543 67899999999999999987 5999999999999999999999999
Q ss_pred CChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
.+....+..|.++...-|.. +..+..+|+-||..+ |+.|.|+.+|-.|-|+.
T Consensus 256 ~Dhk~lvrQIs~GaYrEP~~-----PSdA~gLIRwmLmVN----P~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 256 RDHKRLVRQISRGAYREPET-----PSDASGLIRWMLMVN----PERRATIEDIASHWWVN 307 (668)
T ss_pred chHHHHHHHhhcccccCCCC-----CchHHHHHHHHHhcC----cccchhHHHHhhhheee
Confidence 99999999888876655543 456889999999999 99999999999999974
No 45
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-47 Score=366.46 Aligned_cols=249 Identities=21% Similarity=0.349 Sum_probs=210.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+.||+|+||.||+|.++.+|+.||||+++... .....+.+|+.+++++.|+++ +++++.+...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL-----TALKYSFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CCEEEEEEcCCEEEEEEe
Confidence 46899999999999999999999999997532 233456789999999988887 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
|+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--------------------- 132 (323)
T cd05571 76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--------------------- 132 (323)
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC---------------------
Confidence 99 999999998765 799999999999999999999999999999999999997766
Q ss_pred cCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+.......
T Consensus 133 ------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~ 206 (323)
T cd05571 133 ------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206 (323)
T ss_pred ------CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH
Confidence 57777787765422 122345799999999999999999999999999999999999999988777666666
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccCC
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~~ 388 (411)
+......+|. .++..+.++|.+||..| |.+|+ ++.++++|+||.++++...
T Consensus 207 ~~~~~~~~p~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~ll~h~~f~~~~~~~~ 262 (323)
T cd05571 207 ILMEEIRFPR----TLSPEAKSLLAGLLKKD----PKQRLGGGPEDAKEIMEHRFFASINWQDV 262 (323)
T ss_pred HHcCCCCCCC----CCCHHHHHHHHHHccCC----HHHcCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence 5544444443 45778999999999999 77777 8999999999998765433
No 46
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5e-47 Score=364.07 Aligned_cols=261 Identities=28% Similarity=0.455 Sum_probs=211.6
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC----
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---- 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---- 165 (411)
+|++.+.||+|+||.||+|++..+++.||||+++.. ......+.+|+.+++.++|+|+ +++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~ 75 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-----VEIKHIMLPPSRRE 75 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCE-----eeecceEeccCCCC
Confidence 699999999999999999999999999999998642 2233457789999999988877 9988877532
Q ss_pred -CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 -NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 -~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
..+|+||||++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~------------- 140 (338)
T cd07859 76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC------------- 140 (338)
T ss_pred CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-------------
Confidence 3589999999889999988765 699999999999999999999999999999999999998776
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecC--CCCCccchhHHHHHHHHHHHhCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~ 316 (411)
.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 141 --------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~ 206 (338)
T cd07859 141 --------------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 206 (338)
T ss_pred --------------cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCC
Confidence 5666666666532211 123478999999999876 578999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHH---------------------------HhhhhhhhhhhccCCccCCCCCCCcHH
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMV---------------------------IRADRRAEKYFRRGARLDWPDGATSRD 369 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~---------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~ 369 (411)
||.+.+....+..+....+..+.... +..+..+.+++.+||+.+ |++||
T Consensus 207 pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rp 282 (338)
T cd07859 207 LFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD----PKDRP 282 (338)
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC----cccCC
Confidence 99887766655555444443332211 124556789999999998 99999
Q ss_pred HHHHHHhcCCCCcccccCCCCC
Q 015222 370 SMRAVWKLLRLPVIDLYSASPN 391 (411)
Q Consensus 370 t~~~il~~~~~~~~~~~~~~~~ 391 (411)
++.++++||||.++......+.
T Consensus 283 t~~e~l~hp~f~~~~~~~~~~~ 304 (338)
T cd07859 283 TAEEALADPYFKGLAKVEREPS 304 (338)
T ss_pred CHHHHhcCchhhhcCccccccc
Confidence 9999999999998877655444
No 47
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-47 Score=373.63 Aligned_cols=286 Identities=21% Similarity=0.321 Sum_probs=218.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.|++++.||+|+||+||+|++..+++.||||++.... .....+.+|+.+++.+.|++| +++++.+.+.+++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~l~~~~~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWV-----VKLYYSFQDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCe-----eeeEEEEecCCEE
Confidence 5899999999999999999999999999999997532 234567889999999988777 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+||||+.+|.++|+|||++......
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999 999999998765 6999999999999999999999999999999999999999999999999976533211
Q ss_pred CC--cccc------CCCCC-----CeeEeecCCc-------cc-c--cCCCcccccCCCccccceecCCCCCccchhHHH
Q 015222 248 GS--YFKN------LPKSS-----AIKLIDFGST-------TF-E--HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304 (411)
Q Consensus 248 ~~--~~~~------~~~~~-----~~kl~Dfg~a-------~~-~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 304 (411)
.. .+.. ..... ....+.++.. .. . .......+||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 0000 00000 0000111100 00 0 001123579999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 305 GCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 305 Gvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
||++|||++|..||...+..+....+..............++..+.++|.+++.. ..++..|+++.++++|+||.+++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~--~~~~~~R~~~~~~l~hp~f~~~~ 312 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCS--AEERLGRNGADDIKAHPFFSEVD 312 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccC--cccccCCCCHHHHhcCcccCCCC
Confidence 9999999999999988776665555443222222112234678899999997643 34467799999999999999877
Q ss_pred ccC
Q 015222 385 LYS 387 (411)
Q Consensus 385 ~~~ 387 (411)
+..
T Consensus 313 ~~~ 315 (381)
T cd05626 313 FSS 315 (381)
T ss_pred hhH
Confidence 644
No 48
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.4e-47 Score=366.86 Aligned_cols=252 Identities=23% Similarity=0.359 Sum_probs=202.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|+++++||+|+||.||+|++..+++.||||++... ......+.+|+.+++.++|+|| +++++++...+.++
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNV-----VKCHDMFDHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCc-----ceeeeEeccCCeEE
Confidence 4688899999999999999999999999999998643 2345678899999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+. ...++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 149 lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~----------------- 205 (353)
T PLN00034 149 VLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK----------------- 205 (353)
T ss_pred EEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC-----------------
Confidence 999999 8888642 2467788899999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
.+||+|||++...... .....||..|+|||++.. ...+.++|||||||++|||++|+.||..
T Consensus 206 ----------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 275 (353)
T PLN00034 206 ----------NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV 275 (353)
T ss_pred ----------CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 5677777776654322 233578999999999853 2345789999999999999999999975
Q ss_pred CChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
....+....+.......+.......+..+.++|.+||..+ |++||++.++++|+||.....
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 276 GRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQRE----PAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred CCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCC----hhhCcCHHHHhcCcccccCCc
Confidence 4333332222222222222233456778999999999988 999999999999999998643
No 49
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.9e-47 Score=372.67 Aligned_cols=283 Identities=22% Similarity=0.325 Sum_probs=216.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|+++++||+|+||.||+|.++.+++.||||++.+.. ...+.+.+|+.+++.+.|++| +++++++.+.++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWV-----VSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCe
Confidence 46999999999999999999999999999999986532 234567789999999888777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999 999999998754 699999999999999999999999999999999999999999999999988753322
Q ss_pred CCC--ccccC----------CCCCCe-------------eEeecCCcccccCCCcccccCCCccccceecCCCCCccchh
Q 015222 247 DGS--YFKNL----------PKSSAI-------------KLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDL 301 (411)
Q Consensus 247 ~~~--~~~~~----------~~~~~~-------------kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 301 (411)
... .+... +....+ ++.+++.+... .....+||+.|+|||++.+..++.++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di 231 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRL--MAYSTVGTPDYIAPEIFLQQGYGQECDW 231 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc--cccccCCCccccCHHHHccCCCCCceee
Confidence 110 00000 000000 01111110000 0112479999999999999899999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 302 WSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 302 wSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
|||||++|||++|..||.+.+..+.+..+......+.......++..++++|.+||. ++.+|+ .|+++.++++|+||.
T Consensus 232 wSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~-~r~~~~~~l~hp~~~ 309 (377)
T cd05629 232 WSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRL-GRGGAHEIKSHPFFR 309 (377)
T ss_pred EecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcC-CCCCHHHHhcCCCcC
Confidence 999999999999999998877766666555432222111112456789999999996 633332 257999999999999
Q ss_pred cccc
Q 015222 382 VIDL 385 (411)
Q Consensus 382 ~~~~ 385 (411)
++++
T Consensus 310 ~~~~ 313 (377)
T cd05629 310 GVDW 313 (377)
T ss_pred CCCH
Confidence 8764
No 50
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-48 Score=351.04 Aligned_cols=256 Identities=26% Similarity=0.453 Sum_probs=221.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--C---e
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--N---H 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~---~ 167 (411)
.|.-.+.+|.|+||.||+|....+++.||||.+-.+... -.+|+++|+.+.|+|| |++.-+|... . +
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~HpNI-----V~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLDHPNI-----VRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcCCcCe-----eeEEEEEEecCCCchhH
Confidence 688999999999999999999999999999998655443 3459999999988888 9988877542 2 5
Q ss_pred EEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 168 ICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 168 ~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..+||||+..+|.++++.. .+..++.-.++-++.||++||.|||+.||+||||||.|||+|.+
T Consensus 97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~--------------- 161 (364)
T KOG0658|consen 97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD--------------- 161 (364)
T ss_pred HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC---------------
Confidence 6799999999999999842 23479999999999999999999999999999999999999864
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
...+||||||+|+..... ..+...|..|+|||.+.|. .|+.+.||||.||++.||+-|++.|.|.+
T Consensus 162 -----------tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s 230 (364)
T KOG0658|consen 162 -----------TGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDS 230 (364)
T ss_pred -----------CCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCC
Confidence 347899999999876443 3456789999999999987 79999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCChhH-------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 323 NLEHLAMMERVLGPLPHHM-------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~-------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
..+++..|.++.|.+..+. ....+.++.+|+.++|..+ |.+|.++.+++.|
T Consensus 231 ~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~----P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 231 SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYS----PSKRLSALEALAH 306 (364)
T ss_pred HHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccC----hhhcCCHHHHhcc
Confidence 9999999999988755433 2235678889999999999 9999999999999
Q ss_pred CCCCccccc
Q 015222 378 LRLPVIDLY 386 (411)
Q Consensus 378 ~~~~~~~~~ 386 (411)
++|......
T Consensus 307 ~fFdelr~~ 315 (364)
T KOG0658|consen 307 PFFDELRDP 315 (364)
T ss_pred hhhHHhhCc
Confidence 999987655
No 51
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.9e-47 Score=372.01 Aligned_cols=282 Identities=24% Similarity=0.347 Sum_probs=216.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+|+++++||+|+||+||+|++..+++.||+|++.+.. .....+.+|+.+++++.|++| +++++.+.+.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i-----v~~~~~~~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC-----CeEEEEEEeCCEE
Confidence 6999999999999999999999999999999997532 234567889999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++......
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999 999999998764 6899999999999999999999999999999999999999999999999986533211
Q ss_pred C--CccccCCCCCCeeEeecCC---------------------ccc-ccCCCcccccCCCccccceecCCCCCccchhHH
Q 015222 248 G--SYFKNLPKSSAIKLIDFGS---------------------TTF-EHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWS 303 (411)
Q Consensus 248 ~--~~~~~~~~~~~~kl~Dfg~---------------------a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 303 (411)
. ..+.. .........+|.. +.. ........+||+.|+|||++.+..++.++||||
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 155 HDSKYYQS-GDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccc-ccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 0 00000 0000000001100 000 000112357999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH---HHHHHhcCCC
Q 015222 304 VGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLRL 380 (411)
Q Consensus 304 lGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t---~~~il~~~~~ 380 (411)
|||++|||++|+.||.+.+..+....+.......+......+++.+.++|.+++ .+ |.+|++ +.++++|+||
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~----p~~R~~~~~~~ei~~hp~f 308 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RG----PEDRLGKNGADEIKAHPFF 308 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cC----HhHcCCCCCHHHHhcCCCc
Confidence 999999999999999988776666555543322222222456788899998875 46 666655 9999999999
Q ss_pred CcccccC
Q 015222 381 PVIDLYS 387 (411)
Q Consensus 381 ~~~~~~~ 387 (411)
..+++..
T Consensus 309 ~~~~~~~ 315 (382)
T cd05625 309 KTIDFSS 315 (382)
T ss_pred CCcChHH
Confidence 9876543
No 52
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.5e-47 Score=373.21 Aligned_cols=283 Identities=23% Similarity=0.321 Sum_probs=216.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||.||+|++..+++.||||++.+.. .....+.+|+.+++.+.|++| +++++.+.+++.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV-----VKLYYSFQDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCE
Confidence 36999999999999999999999999999999996432 234567789999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999 999999998765 689999999999999999999999999999999999999999888888887643321
Q ss_pred C--CCccccCCCCCCeeEeecCCc-------c-----------cccCCCcccccCCCccccceecCCCCCccchhHHHHH
Q 015222 247 D--GSYFKNLPKSSAIKLIDFGST-------T-----------FEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 247 ~--~~~~~~~~~~~~~kl~Dfg~a-------~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
. ...+... ........+.... . .........+||+.|+|||++.+..++.++|||||||
T Consensus 154 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 154 THDSKYYQKG-DHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred cccccccccc-cccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 1 0000000 0000000000000 0 0000112357999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH---HHHHHHhcCCCCcc
Q 015222 307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD---SMRAVWKLLRLPVI 383 (411)
Q Consensus 307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~---t~~~il~~~~~~~~ 383 (411)
++|||++|+.||.+.+..+....+.......+......++..+.++|.+|+ .+ |.+|+ ++.++++|+||..+
T Consensus 233 ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~----p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 233 ILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CG----AEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred eeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cC----HhhcCCCCCHHHHhCCCCcCCC
Confidence 999999999999988776665555433222222222346778889998865 46 88888 99999999999987
Q ss_pred cccC
Q 015222 384 DLYS 387 (411)
Q Consensus 384 ~~~~ 387 (411)
++..
T Consensus 308 ~~~~ 311 (376)
T cd05598 308 DFAS 311 (376)
T ss_pred CHHH
Confidence 6433
No 53
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.9e-47 Score=368.97 Aligned_cols=281 Identities=23% Similarity=0.327 Sum_probs=217.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||+||+|++..+++.||||+++... .....+..|+.++..+.|+++ +++++.+.++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-----VKLYYSFQDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-----cchhhheecCCe
Confidence 47999999999999999999999999999999997532 334567889999999988777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 99999999 999999998764 799999999999999999999999999999999999999988777777776544332
Q ss_pred CCCccccCCCCCC-eeEeecC----CcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 247 DGSYFKNLPKSSA-IKLIDFG----STTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~-~kl~Dfg----~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
............. ....... .............||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 2100000000000 0000000 0000001122357899999999999999999999999999999999999999988
Q ss_pred ChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-HHHHHhcCCCCccccc
Q 015222 322 ENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 322 ~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-~~~il~~~~~~~~~~~ 386 (411)
+..+....+..... .+|.. ..++..+.++|.+||. + |.+|++ +.++++||||.++++.
T Consensus 234 ~~~~~~~~i~~~~~~~~~p~~--~~~~~~~~~li~~ll~-d----p~~R~~s~~~ll~hp~~~~~~~~ 294 (350)
T cd05573 234 TLQETYNKIINWKESLRFPPD--PPVSPEAIDLICRLLC-D----PEDRLGSFEEIKSHPFFKGIDWE 294 (350)
T ss_pred CHHHHHHHHhccCCcccCCCC--CCCCHHHHHHHHHHcc-C----hhhcCCCHHHHhcCCCcCCCCHH
Confidence 87666666655222 22222 2367889999999986 7 999999 9999999999987664
No 54
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.7e-47 Score=368.32 Aligned_cols=257 Identities=23% Similarity=0.394 Sum_probs=210.4
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.++|++++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.++++++|+|| ++++++|...+..++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~l 160 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINHPSI-----IQLKGTFTYNKFTCL 160 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCCCCC-----CCEeEEEEECCeeEE
Confidence 4689999999999999999999999999999997542 346789999999998887 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+++++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~------------------- 219 (391)
T PHA03212 161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG------------------- 219 (391)
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC-------------------
Confidence 99999889999987764 689999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccC----CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC----
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQ----DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE---- 322 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~---- 322 (411)
.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||...+
T Consensus 220 --------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~ 291 (391)
T PHA03212 220 --------DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG 291 (391)
T ss_pred --------CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence 578888887754221 1223579999999999999899999999999999999999998874322
Q ss_pred ---hHHHHHHHHHHhCCCChhH-------------------------------HHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 323 ---NLEHLAMMERVLGPLPHHM-------------------------------VIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 323 ---~~~~~~~i~~~~~~~p~~~-------------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
....+..+....+..|..+ ....+..+.++|.+||..| |.+|
T Consensus 292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d----P~~R 367 (391)
T PHA03212 292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD----AHHR 367 (391)
T ss_pred cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC----hhhC
Confidence 2233333333333222111 1124557889999999999 9999
Q ss_pred HHHHHHHhcCCCCcccccCCCC
Q 015222 369 DSMRAVWKLLRLPVIDLYSASP 390 (411)
Q Consensus 369 ~t~~~il~~~~~~~~~~~~~~~ 390 (411)
||++|+++|+||.++.....+|
T Consensus 368 pta~elL~hp~f~~~~~~~~~~ 389 (391)
T PHA03212 368 PSAEALLDFAAFQDIPDPYPNP 389 (391)
T ss_pred CCHHHHhcChhhccCCCCCCCC
Confidence 9999999999999876654443
No 55
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-46 Score=361.14 Aligned_cols=262 Identities=27% Similarity=0.453 Sum_probs=211.8
Q ss_pred ceEEeeCC---ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcc
Q 015222 81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR 154 (411)
Q Consensus 81 ~~~~~~~~---~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~ 154 (411)
.|.+..++ .+.++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++|+||
T Consensus 7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni---- 82 (359)
T cd07876 7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI---- 82 (359)
T ss_pred cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCE----
Confidence 45555555 4568999999999999999999999999999999998643 2344567789999999988877
Q ss_pred eEEEeeeeecC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 015222 155 CVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228 (411)
Q Consensus 155 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~ 228 (411)
+++++++... ..+|+||||++++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 -v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~ 157 (359)
T cd07876 83 -ISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 157 (359)
T ss_pred -eeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC
Confidence 9999988643 35799999998888887753 488999999999999999999999999999999999998
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHH
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
.+| .+||+|||++...... .....||+.|+|||++.+..++.++|||||||
T Consensus 158 ~~~---------------------------~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 158 SDC---------------------------TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 210 (359)
T ss_pred CCC---------------------------CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence 766 5677777777643222 23357899999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHH--------------------------------------Hhhhhh
Q 015222 307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMV--------------------------------------IRADRR 348 (411)
Q Consensus 307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~--------------------------------------~~~~~~ 348 (411)
++|+|++|+.||.+.+..+.+..+.+..+..+..+. ...++.
T Consensus 211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
T cd07876 211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQ 290 (359)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchh
Confidence 999999999999987766555444443333222111 112456
Q ss_pred hhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 349 AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 349 ~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
++++|.+||..| |.+|+|+.|+++|||+..
T Consensus 291 ~~~li~~mL~~d----P~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 291 ARDLLSKMLVID----PDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHhccC----cccCCCHHHHhcCchhhh
Confidence 789999999999 999999999999999975
No 56
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=336.48 Aligned_cols=267 Identities=24% Similarity=0.371 Sum_probs=231.3
Q ss_pred cCCCeEEE-eeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec----
Q 015222 90 LTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---- 164 (411)
Q Consensus 90 ~~~~y~i~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---- 164 (411)
+.++|.+- ++||-|-.|.|..+.++.|++.+|+|++.... ...+|+++.-..+ +|+|||.++++|+.
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s----~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMAS----GHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhc----CCCceEEeehhhhhhccC
Confidence 45678775 57899999999999999999999999997654 3556777654443 45666999998864
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
...+.+|||.+ ||.|++.++.++...++|.++..|++||..|+.|||+.+|.||||||+|+|....+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~------------ 198 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS------------ 198 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC------------
Confidence 46789999999 99999999999988899999999999999999999999999999999999987654
Q ss_pred cCCCCCccccCCCCCCeeEeecCCccccc--CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEH--QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.+..+||+|||+|+... ....+.+-|++|.|||++....|+...|+||+||++|-|++|.+||.+.
T Consensus 199 ------------~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~ 266 (400)
T KOG0604|consen 199 ------------PNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_pred ------------CCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccccc
Confidence 56689999999998766 3345678899999999999999999999999999999999999999875
Q ss_pred Ch----HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCCCCCc
Q 015222 322 EN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSASPNC 392 (411)
Q Consensus 322 ~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~~~~~ 392 (411)
.. .....+|......||...|..+++.++++|+++|..+ |++|.|+.++++|||+.+.......|-+
T Consensus 267 hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~----PteRlTI~~~m~hpwi~~~~~vp~tpl~ 337 (400)
T KOG0604|consen 267 HGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTE----PTERLTIEEVMDHPWINQYEAVPQTPLS 337 (400)
T ss_pred CCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCC----chhheeHHHhhcCchhcccccCCCCCch
Confidence 43 3456778888889999999999999999999999999 9999999999999999987665555543
No 57
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.4e-47 Score=367.67 Aligned_cols=256 Identities=21% Similarity=0.331 Sum_probs=212.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|++.+.||+|+||.||+|+++.+++.||+|++.+.. .....+.+|+.+++.++|+++ +++++++.+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-----v~~~~~~~~~~ 116 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-----VQLHYAFQDDK 116 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCC
Confidence 357999999999999999999999999999999996432 233446789999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~-------------- 179 (370)
T cd05596 117 YLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------------- 179 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--------------
Confidence 999999999 99999998764 489999999999999999999999999999999999998766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC----CCCccchhHHHHHHHHHHHhCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL----GWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltg~~p 317 (411)
.+||+|||++...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.|
T Consensus 180 -------------~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 246 (370)
T cd05596 180 -------------HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246 (370)
T ss_pred -------------CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCC
Confidence 5677777776654321 1345799999999998754 478999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCc--HHHHHHHHhcCCCCcccc
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS--RDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~--R~t~~~il~~~~~~~~~~ 385 (411)
|.+.+....+..+..............++..++++|.+||..+ |.+ |+++.++++|+||.+..+
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~----p~r~~R~s~~ell~h~~~~~~~~ 312 (370)
T cd05596 247 FYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDR----EVRLGRNGVDEIKSHPFFKNDQW 312 (370)
T ss_pred cCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccCh----hhccCCCCHHHHhcCcccCCCCh
Confidence 9988877666666543322211112246788999999999877 665 999999999999998654
No 58
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-46 Score=358.63 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=212.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+|++++.||+|+||.||+|.+..+++.||||++++.. ...+.+..|..++..+.|++ +++.+++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~ 76 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP----FLTQLHSCFQTMDRL 76 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC----ceeeeEEEEEcCCEE
Confidence 4899999999999999999999999999999997532 33455677888888887654 358889999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~---------------- 138 (324)
T cd05587 77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG---------------- 138 (324)
T ss_pred EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC----------------
Confidence 9999999 999999998765 689999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 139 -----------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (324)
T cd05587 139 -----------HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED 207 (324)
T ss_pred -----------CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 56777777765321 1223457999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH-----HHHHhcCCCCcccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM-----RAVWKLLRLPVIDL 385 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~-----~~il~~~~~~~~~~ 385 (411)
+.+..+......+|. .++..+.+++.+||..+ |.+|++. +++++||||..+++
T Consensus 208 ~~~~~i~~~~~~~~~----~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~~~~hp~~~~~~~ 265 (324)
T cd05587 208 ELFQSIMEHNVSYPK----SLSKEAVSICKGLLTKH----PAKRLGCGPTGERDIREHAFFRRIDW 265 (324)
T ss_pred HHHHHHHcCCCCCCC----CCCHHHHHHHHHHhhcC----HHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 777777665555443 45778899999999999 6666654 89999999998765
No 59
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.4e-46 Score=350.62 Aligned_cols=256 Identities=29% Similarity=0.490 Sum_probs=206.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-CCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee----
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD---- 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~---- 163 (411)
++|++.+.||+|+||+||+|++.. +++.||+|+++... .......+|+.+++.+.. ..|+|++++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc--cCCCCcceEEEEEecccC
Confidence 479999999999999999999854 56889999986432 223456678888877742 12344499998875
Q ss_pred -cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 164 -YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 164 -~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
....+++||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~----------- 147 (290)
T cd07862 79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG----------- 147 (290)
T ss_pred CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-----------
Confidence 34579999999988999999876555699999999999999999999999999999999999998766
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|++||.+
T Consensus 148 ----------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 148 ----------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred ----------------CEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 5677777776543322 2335789999999999988999999999999999999999999999
Q ss_pred CChHHHHHHHHHHhCCCCh-----------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 321 HENLEHLAMMERVLGPLPH-----------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~-----------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+..+.+..+....+.... .+.+..+..+.+++.+||+.+ |++||++.++++|
T Consensus 212 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~s~~~~l~h 287 (290)
T cd07862 212 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN----PAKRISAYSALSH 287 (290)
T ss_pred CCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccC----chhcCCHHHHhcC
Confidence 8887777777654432211 122345677889999999999 9999999999999
Q ss_pred CCC
Q 015222 378 LRL 380 (411)
Q Consensus 378 ~~~ 380 (411)
|||
T Consensus 288 p~f 290 (290)
T cd07862 288 PYF 290 (290)
T ss_pred CCC
Confidence 997
No 60
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-49 Score=364.44 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=221.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..|..++.||+|+||.||+|.+..+++.||+|++.... ...+.+++|+.+|.++++++| .++|+.|..+..++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~i-----t~yygsyl~g~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNI-----TEYYGSYLKGTKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchH-----HhhhhheeecccHH
Confidence 35888899999999999999999999999999997433 445778899999999999877 89999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||| ||++.+.+.... .+.+..+..++++++.||.|||+++.+|||||+.|||+..+|
T Consensus 88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g----------------- 148 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG----------------- 148 (467)
T ss_pred HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC-----------------
Confidence 999999 999999998875 568999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||.+...... ..+++||+.|||||++.+..|+.++||||||++.+||++|.+|+.......
T Consensus 149 ----------~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr 218 (467)
T KOG0201|consen 149 ----------DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMR 218 (467)
T ss_pred ----------cEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcce
Confidence 6788888887654432 366899999999999998899999999999999999999999998877754
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
.+..|- ...|+.+...+++.+++|+..||.++ |+.||++.++|+|.|++...
T Consensus 219 vlflIp---k~~PP~L~~~~S~~~kEFV~~CL~k~----P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 219 VLFLIP---KSAPPRLDGDFSPPFKEFVEACLDKN----PEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred EEEecc---CCCCCccccccCHHHHHHHHHHhhcC----cccCcCHHHHhhhHHHHhcC
Confidence 444433 34556666688899999999999999 99999999999999999833
No 61
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=6.9e-47 Score=366.48 Aligned_cols=282 Identities=22% Similarity=0.335 Sum_probs=216.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||.||+|.++.+++.||||+++... .....+..|+.++..+.|+++ +++++.+.+.++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~~~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWV-----VKMFYSFQDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence 36999999999999999999999999999999997432 234567789999999887776 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999 999999998765 699999999999999999999999999999999999999999888888887654432
Q ss_pred CCCc--cccCCCCCCeeEeecCCcccc------------cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 247 DGSY--FKNLPKSSAIKLIDFGSTTFE------------HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 247 ~~~~--~~~~~~~~~~kl~Dfg~a~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
.... +.... ...-.++.+.... .......+||+.|+|||++.+..++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~ 230 (360)
T cd05627 154 AHRTEFYRNLT---HNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230 (360)
T ss_pred ccccccccccc---cCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecc
Confidence 1100 00000 0000111110000 00112357999999999999999999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 313 SGEALFQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
+|+.||.+.+..+....+..... .+|.. ..++..++++|.+++ .++.+|+. |.++.++++||||.++++..
T Consensus 231 tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~l~-~~p~~R~~-~~~~~ei~~hp~f~~~~~~~ 303 (360)
T cd05627 231 IGYPPFCSETPQETYRKVMNWKETLVFPPE--VPISEKAKDLILRFC-TDSENRIG-SNGVEEIKSHPFFEGVDWGH 303 (360)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCCceecCCC--CCCCHHHHHHHHHhc-cChhhcCC-CCCHHHHhcCCCCCCCCHHH
Confidence 99999998887776666654322 22322 235778999999876 47333332 23689999999999987543
No 62
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.2e-46 Score=365.41 Aligned_cols=257 Identities=21% Similarity=0.322 Sum_probs=211.4
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|++.+.||+|+||.||+|+++.+++.||+|++.+.. .....+.+|+.+++.++|+++ +++++.+.+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~~~ 116 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFCAFQDDK 116 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCC
Confidence 468999999999999999999999999999999986422 233456789999999888877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~-------------- 179 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG-------------- 179 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--------------
Confidence 999999999 99999999764 489999999999999999999999999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCCC----CCccchhHHHHHHHHHHHhCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~elltg~~p 317 (411)
.+||+|||++...... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.|
T Consensus 180 -------------~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~P 246 (370)
T cd05621 180 -------------HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 246 (370)
T ss_pred -------------CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCC
Confidence 6788888877654322 13457999999999997643 78999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
|.+.+....+..+......+.......++..+++++.+||..+ .. +..|+++.++++||||.+..
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~-~~-r~~R~~~~e~l~hp~~~~~~ 311 (370)
T cd05621 247 FYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDR-EV-RLGRNGVEEIKQHPFFKNDQ 311 (370)
T ss_pred CCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCc-hh-ccCCCCHHHHhcCcccCCCC
Confidence 9988877777666653322221112346788999999998733 22 23488999999999998754
No 63
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.4e-46 Score=357.35 Aligned_cols=247 Identities=21% Similarity=0.341 Sum_probs=208.1
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+.||+|+||.||+|++..+|+.||+|+++... .....+.+|+.+++.+.|+++ +++++.+...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCEEEEEEe
Confidence 46899999999999999999999999997532 233456789999999988887 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
|+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------------------- 132 (323)
T cd05595 76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--------------------- 132 (323)
T ss_pred CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC---------------------
Confidence 99 999999887765 699999999999999999999999999999999999998776
Q ss_pred cCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....
T Consensus 133 ------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~ 206 (323)
T cd05595 133 ------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL 206 (323)
T ss_pred ------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 456666666543211 12235789999999999998999999999999999999999999988777766666
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCccccc
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~ 386 (411)
+......+|. .+++.+.++|.+||+.| |.+|+ ++.++++|+||.++.+.
T Consensus 207 ~~~~~~~~p~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~~l~h~~~~~~~~~ 260 (323)
T cd05595 207 ILMEEIRFPR----TLSPEAKSLLAGLLKKD----PKQRLGGGPSDAKEVMEHRFFLSINWQ 260 (323)
T ss_pred HhcCCCCCCC----CCCHHHHHHHHHHccCC----HHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 6544444443 45778899999999999 77776 89999999999987653
No 64
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-47 Score=355.06 Aligned_cols=260 Identities=24% Similarity=0.409 Sum_probs=233.8
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.+-|.+.+.||+|.|.+|-+|++.-||+.||||++.+.. .....+.+|+..++.+.|+|| |++|++....
T Consensus 15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNi-----VRLYEViDTQ 89 (864)
T KOG4717|consen 15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNI-----VRLYEVIDTQ 89 (864)
T ss_pred ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCe-----eeeeehhccc
Confidence 45567999999999999999999999999999999997644 345678899999999999988 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
..+|||+|+- +|+|+|||.++. ..+.++.+++++.||+.|+.|+|+..+|||||||+||.+..
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE--------------- 153 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE--------------- 153 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee---------------
Confidence 9999999999 999999999876 57999999999999999999999999999999999998744
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccC--CCcccccCCCccccceecCCCCC-ccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ--DHSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
+-+-|||+|||++..... ...+.+|+..|-|||++.|..|+ +++||||||||||-|++|++||+..
T Consensus 154 -----------KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 154 -----------KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred -----------ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence 334688899998865433 34678999999999999999887 8899999999999999999999999
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
++.+.+.+|......+|... +.+++++|..||..| |.+|.++++|..++|++.++....
T Consensus 223 NDSETLTmImDCKYtvPshv----S~eCrdLI~sMLvRd----PkkRAslEeI~s~~Wlq~~D~~~s 281 (864)
T KOG4717|consen 223 NDSETLTMIMDCKYTVPSHV----SKECRDLIQSMLVRD----PKKRASLEEIVSTSWLQAGDRGLS 281 (864)
T ss_pred cchhhhhhhhcccccCchhh----hHHHHHHHHHHHhcC----chhhccHHHHhccccccCCCCCcc
Confidence 99999999999999998764 678899999999999 999999999999999999886554
No 65
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2e-46 Score=356.16 Aligned_cols=244 Identities=25% Similarity=0.390 Sum_probs=207.4
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||+|+||.||+|++..+++.||+|+++.. ......+.+|+.+++++.|+|| +++++++...+..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFI-----VPLKFSFQSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcE-----eceeeEEecCCeEEEEEcCC
Confidence 79999999999999999999999999743 2334556789999999988776 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~----------------------- 130 (312)
T cd05585 76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG----------------------- 130 (312)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC-----------------------
Confidence 999999998764 699999999999999999999999999999999999997766
Q ss_pred CCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+.
T Consensus 131 ----~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~ 206 (312)
T cd05585 131 ----HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKIL 206 (312)
T ss_pred ----cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHH
Confidence 578888887764321 1233579999999999999999999999999999999999999999877776666655
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH---HHHHHHhcCCCCcccc
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD---SMRAVWKLLRLPVIDL 385 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~---t~~~il~~~~~~~~~~ 385 (411)
.....+| ..++..+.++|.+||..| |.+|+ ++.++++||||.+..+
T Consensus 207 ~~~~~~~----~~~~~~~~~li~~~L~~d----p~~R~~~~~~~e~l~hp~~~~~~~ 255 (312)
T cd05585 207 QEPLRFP----DGFDRDAKDLLIGLLSRD----PTRRLGYNGAQEIKNHPFFSQLSW 255 (312)
T ss_pred cCCCCCC----CcCCHHHHHHHHHHcCCC----HHHcCCCCCHHHHHcCCCcCCCCH
Confidence 4433443 346778999999999999 88885 6899999999998643
No 66
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2e-46 Score=358.59 Aligned_cols=247 Identities=21% Similarity=0.347 Sum_probs=208.3
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+.||+|+||.||+|++..+++.||+|++.+.. .....+.+|+.+++.+.|+++ +++++.+...+.+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-----TSLKYSFQTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCEEEEEEe
Confidence 46899999999999999999999999997532 234567789999999988877 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
|+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--------------------- 132 (328)
T cd05593 76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--------------------- 132 (328)
T ss_pred CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC---------------------
Confidence 99 999999887764 699999999999999999999999999999999999998766
Q ss_pred cCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....
T Consensus 133 ------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~ 206 (328)
T cd05593 133 ------HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206 (328)
T ss_pred ------cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHH
Confidence 567777777654221 12335799999999999998999999999999999999999999988777666655
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCccccc
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~ 386 (411)
+......+|. .++..+.++|.+||..+ |.+|+ ++.++++|+||...++.
T Consensus 207 ~~~~~~~~p~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~il~h~~~~~~~~~ 260 (328)
T cd05593 207 ILMEDIKFPR----TLSADAKSLLSGLLIKD----PNKRLGGGPDDAKEIMRHSFFTGVNWQ 260 (328)
T ss_pred hccCCccCCC----CCCHHHHHHHHHHcCCC----HHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 5444344443 45778899999999999 66665 89999999999887654
No 67
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.9e-46 Score=350.48 Aligned_cols=263 Identities=21% Similarity=0.305 Sum_probs=215.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.|++.+.||+|+||+||++.+..+++.||+|++.... .....+.+|+.+++.++|+++ +.+++.+..++.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----VSLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCE-----eeeeeeecCCCeE
Confidence 4899999999999999999999999999999986432 223446789999999988777 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~---------------- 139 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG---------------- 139 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC----------------
Confidence 9999999 89999988765445699999999999999999999999999999999999997665
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++....... ....|+..|+|||++.+..++.++|||||||++|||++|+.||.+.+...
T Consensus 140 -----------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~ 208 (285)
T cd05605 140 -----------HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV 208 (285)
T ss_pred -----------CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh
Confidence 57777777776543222 23478999999999998899999999999999999999999998866544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccCCCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYSASPN 391 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~~~~~ 391 (411)
....+.......+.......+..+.+++.+|+..| |.+|+ ++.++++|+||...++......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 275 (285)
T cd05605 209 KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKD----PGFRLGCRGEGAEEVKAHPFFRTANFKRLEAG 275 (285)
T ss_pred HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCC----HHHhcCCCCCCHHHHhcCcCccCCCHHHHhhC
Confidence 44333332222223333456778899999999998 99999 9999999999998776654433
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.7e-47 Score=361.48 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=213.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||+||+|+++.+++.||+|+++... .....+.+|+.+++.+.|+++ +++++++.+.+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i-----~~~~~~~~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWI-----PQLQYAFQDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCe
Confidence 46999999999999999999999999999999997543 244567789999998888777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.|+||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--------------- 139 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--------------- 139 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC---------------
Confidence 99999999 999999998763 3699999999999999999999999999999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceec------CCCCCccchhHHHHHHHHHHHhCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVIL------GLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
.+||+|||++....... ....||+.|+|||++. +..++.++|||||||++|||++|+.
T Consensus 140 ------------~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~ 207 (330)
T cd05601 140 ------------HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRS 207 (330)
T ss_pred ------------CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCC
Confidence 56777777765443221 2246899999999987 4467899999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 317 LFQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
||...+....+..+..... .+|. ...++..+.++|.+||. + |.+|+++.++++|+||..+++..
T Consensus 208 Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~li~~ll~-~----p~~R~t~~~l~~h~~~~~~~~~~ 273 (330)
T cd05601 208 PFHEGTSAKTYNNIMNFQRFLKFPE--DPKVSSDFLDLIQSLLC-G----QKERLGYEGLCCHPFFSKIDWNN 273 (330)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-C----hhhCCCHHHHhCCCCcCCCCHHH
Confidence 9988777666666554322 2222 12467788999999986 7 99999999999999999876543
No 69
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7.1e-46 Score=367.72 Aligned_cols=259 Identities=24% Similarity=0.402 Sum_probs=210.7
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec----
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---- 164 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~---- 164 (411)
...++|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+++.++|+|+ +++++++..
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~h~ni-----v~l~~~~~~~~~~ 134 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLNHINI-----IFLKDYYYTECFK 134 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcCCCCC-----cceeeeEeecccc
Confidence 34568999999999999999999999999999999886432 234569999999998888 888777632
Q ss_pred ----CCeEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 015222 165 ----RNHICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238 (411)
Q Consensus 165 ----~~~~~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df 238 (411)
...+++||||++++|.+++... ....+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~------- 207 (440)
T PTZ00036 135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNT------- 207 (440)
T ss_pred cCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCC-------
Confidence 2357899999988898887632 234699999999999999999999999999999999999997543
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCC
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~ 315 (411)
..+||+|||++...... .....||+.|+|||++.+. .++.++|||||||++|||++|.
T Consensus 208 -------------------~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~ 268 (440)
T PTZ00036 208 -------------------HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268 (440)
T ss_pred -------------------CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 25788888888754322 2345789999999998765 6899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhH-------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHH
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHM-------------------------VIRADRRAEKYFRRGARLDWPDGATSRDS 370 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~-------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t 370 (411)
+||.+.+..+.+..+.+..+..+... ....+.++.+||.+||..+ |.+|+|
T Consensus 269 ~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d----P~~R~t 344 (440)
T PTZ00036 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE----PLKRLN 344 (440)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC----hhHCcC
Confidence 99999888777777766554332211 1124567899999999999 999999
Q ss_pred HHHHHhcCCCCcccc
Q 015222 371 MRAVWKLLRLPVIDL 385 (411)
Q Consensus 371 ~~~il~~~~~~~~~~ 385 (411)
+.++++||||.++..
T Consensus 345 a~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 345 PIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhCChhHHhhhc
Confidence 999999999987653
No 70
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-45 Score=350.34 Aligned_cols=256 Identities=27% Similarity=0.444 Sum_probs=213.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.++||+|+||.||+|+++.+++.||+|.++... .....+.+|+.++++++|+|+ +++++++..++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIVHTDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCc-----ceEEEEEeeCCeEE
Confidence 57999999999999999999999999999999987432 233456789999999988887 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~------------------ 141 (309)
T cd07872 81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG------------------ 141 (309)
T ss_pred EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence 999999779999887654 3589999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 142 ---------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 212 (309)
T cd07872 142 ---------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED 212 (309)
T ss_pred ---------CEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 5677777766543221 1234678999999998764 68999999999999999999999999888777
Q ss_pred HHHHHHHHhCCCChhHH--------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 326 HLAMMERVLGPLPHHMV--------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~--------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
.+..+.+..+..+...+ ..++..+.++|.+||..+ |.+|+|+.++++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d----p~~R~t~~e~l~h~~ 288 (309)
T cd07872 213 ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYE----SKKRISAEEAMKHAY 288 (309)
T ss_pred HHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCC----hhhCCCHHHHhcChh
Confidence 77666665543332221 234667889999999999 999999999999999
Q ss_pred CCccc
Q 015222 380 LPVID 384 (411)
Q Consensus 380 ~~~~~ 384 (411)
|..+.
T Consensus 289 ~~~~~ 293 (309)
T cd07872 289 FRSLG 293 (309)
T ss_pred hhhcc
Confidence 99865
No 71
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5e-46 Score=358.10 Aligned_cols=259 Identities=25% Similarity=0.451 Sum_probs=214.4
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
+.++|++++.||+|+||+||+|.+..+++.||||++.... .....+.+|+.++++++|+|| +++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~ 87 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV-----IGLLDVFTPAT 87 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCch-----hhhhhhhcccc
Confidence 4578999999999999999999999999999999987532 233556789999999988887 8888877532
Q ss_pred -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
...|++|++++++|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~--------- 155 (343)
T cd07878 88 SIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC--------- 155 (343)
T ss_pred cccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC---------
Confidence 467999999999999887653 599999999999999999999999999999999999998766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.+||+|||++...........||..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 156 ------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 156 ------------------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred ------------------CEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 5777888877766555555689999999999987 478999999999999999999999998
Q ss_pred CCChHHHHHHHHHHhCCCChhHHH---------------------------hhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 320 THENLEHLAMMERVLGPLPHHMVI---------------------------RADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~---------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
+.+..+.+..+....+..+..... ..++.+.++|.+||..| |.+|+|+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d----p~~R~s~~ 293 (343)
T cd07878 218 GNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD----SDKRISAS 293 (343)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCC----hhhCCCHH
Confidence 877766666665544433322211 23445789999999999 99999999
Q ss_pred HHHhcCCCCcccccC
Q 015222 373 AVWKLLRLPVIDLYS 387 (411)
Q Consensus 373 ~il~~~~~~~~~~~~ 387 (411)
++++||||.......
T Consensus 294 ell~hp~~~~~~~~~ 308 (343)
T cd07878 294 EALAHPYFSQYHDPE 308 (343)
T ss_pred HHhcCcchhccCCCc
Confidence 999999999876544
No 72
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.7e-46 Score=354.90 Aligned_cols=258 Identities=23% Similarity=0.318 Sum_probs=209.1
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
|++++.||+|+||.||+|.+..+++.||||++++.. ...+.+.+|+.++..+. .+.|+|++++++++...+..|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~--~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN--SERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc--ccCCCChhceeeEEEcCCEEE
Confidence 788999999999999999999999999999997532 23345666776665443 223455599999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|..++... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 79 lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~----------------- 138 (324)
T cd05589 79 FVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG----------------- 138 (324)
T ss_pred EEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC-----------------
Confidence 999999 99999888653 599999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+
T Consensus 139 ----------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~ 208 (324)
T cd05589 139 ----------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE 208 (324)
T ss_pred ----------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH
Confidence 56777777655321 12234579999999999999899999999999999999999999999888877
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-HHHHHHhcCCCCcccccC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-t~~~il~~~~~~~~~~~~ 387 (411)
....+.......|. .++..+.++|.+||..||.+||...+ ++.++++|+||.++.+..
T Consensus 209 ~~~~i~~~~~~~p~----~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~ 267 (324)
T cd05589 209 VFDSIVNDEVRYPR----FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDD 267 (324)
T ss_pred HHHHHHhCCCCCCC----CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHH
Confidence 77776665544443 35677899999999999444433221 799999999999876543
No 73
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.5e-46 Score=355.70 Aligned_cols=247 Identities=23% Similarity=0.309 Sum_probs=207.7
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|+++.+++.||||++++.. ...+.+..|..++..+ .|+++ +++++++...+.+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----v~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL-----TQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCch-----hceeeEEEcCCEEEEEE
Confidence 46899999999999999999999999997532 2334566788888766 35555 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~-------------------- 133 (320)
T cd05590 76 EFVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG-------------------- 133 (320)
T ss_pred cCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--------------------
Confidence 999 899999988765 699999999999999999999999999999999999998776
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+...
T Consensus 134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~ 206 (320)
T cd05590 134 -------HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 206 (320)
T ss_pred -------cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 56777777665421 12234579999999999999899999999999999999999999999888877777
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH------HHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM------RAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~------~~il~~~~~~~~~~~ 386 (411)
.+.......|. .++..+.+++.+||..| |.+|+++ +++++|+||.++.+.
T Consensus 207 ~i~~~~~~~~~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~~~~~h~~f~~~~~~ 262 (320)
T cd05590 207 AILNDEVVYPT----WLSQDAVDILKAFMTKN----PTMRLGSLTLGGEEAILRHPFFKELDWE 262 (320)
T ss_pred HHhcCCCCCCC----CCCHHHHHHHHHHcccC----HHHCCCCCCCCCHHHHHcCCCcCCCCHH
Confidence 76654444443 35678899999999999 8888887 999999999987653
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-46 Score=358.02 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=202.9
Q ss_pred CeEEEeeeccccceEEEEEEeC---CCCcEEEEEEeccch-----hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~ 163 (411)
+|++.+.||+|+||+||+|++. .+++.||+|++++.. ...+.+..|+.+++.+. |+++ +.+++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL-----VTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----ccEEEEEe
Confidence 4899999999999999999864 578999999997432 23355678999999885 4555 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
.++.+++||||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~----------- 142 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG----------- 142 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC-----------
Confidence 999999999999 999999998765 699999999999999999999999999999999999998766
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++...... .....||+.|+|||++.+. .++.++|||||||++|||++|..|
T Consensus 143 ----------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~p 206 (332)
T cd05614 143 ----------------HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASP 206 (332)
T ss_pred ----------------CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCC
Confidence 5677777776543211 1235799999999999875 478999999999999999999999
Q ss_pred CCCCCh----HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccc
Q 015222 318 FQTHEN----LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDL 385 (411)
Q Consensus 318 f~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~ 385 (411)
|..... ......+......++ ..++..+.+++.+||+.| |++|+ +++++++|+||.+..+
T Consensus 207 f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~d----p~~R~~~~~~~~~~~l~h~~~~~~~~ 275 (332)
T cd05614 207 FTLEGERNTQSEVSRRILKCDPPFP----SFIGPEAQDLLHKLLRKD----PKKRLGAGPQGASEIKEHPFFKGLDW 275 (332)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcCCC----HHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence 975432 222222322222333 346778899999999999 77777 8999999999998654
No 75
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-45 Score=355.82 Aligned_cols=253 Identities=28% Similarity=0.449 Sum_probs=210.1
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
+.++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+.|+|+ +++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----i~~~~~~~~~~ 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI-----IGLLNVFTPQK 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCc-----cccceeecccc
Confidence 468999999999999999999999999999999998643 2334567789999999988887 8888776542
Q ss_pred -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
..+|+||||++++|.+.+.. .+++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 97 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------- 163 (364)
T cd07875 97 SLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC--------- 163 (364)
T ss_pred cccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC---------
Confidence 46899999998889888754 488999999999999999999999999999999999997766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.+||+|||++....... ....||..|+|||++.+..++.++|||||||++|+|++|+.||
T Consensus 164 ------------------~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf 225 (364)
T cd07875 164 ------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF 225 (364)
T ss_pred ------------------cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCC
Confidence 67888888876544322 3357899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHh--------------------------------------hhhhhhhhhccCCccC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIR--------------------------------------ADRRAEKYFRRGARLD 360 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~--------------------------------------~~~~~~~li~~~l~~~ 360 (411)
.+.+..+.+..+....+.....+... .+..++++|.+||..|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d 305 (364)
T cd07875 226 PGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305 (364)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcC
Confidence 98887777666655444333222111 1345789999999999
Q ss_pred CCCCCCcHHHHHHHHhcCCCCc
Q 015222 361 WPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 361 ~~~rp~~R~t~~~il~~~~~~~ 382 (411)
|.+|||+.++++||||..
T Consensus 306 ----P~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 306 ----ASKRISVDEALQHPYINV 323 (364)
T ss_pred ----cccCCCHHHHhcCccccc
Confidence 999999999999999975
No 76
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.1e-46 Score=355.75 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=206.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHH-HHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|+++.+++.||||++.... .....+..|.. +++.++|+++ +++++.+...+..|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~i-----v~~~~~~~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCC-----CCeeEEEEeCCEEEEEE
Confidence 46899999999999999999999999997432 12233344444 4456666666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~-------------------- 133 (323)
T cd05575 76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG-------------------- 133 (323)
T ss_pred cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--------------------
Confidence 999 999999998765 699999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~ 206 (323)
T cd05575 134 -------HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYD 206 (323)
T ss_pred -------cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence 567777777654221 1233578999999999999999999999999999999999999999877766666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.+.......+ ...+..+.++|.+||+.||.+||+.++.+.++++|+||..+.+
T Consensus 207 ~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~ 259 (323)
T cd05575 207 NILNKPLRLK----PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINW 259 (323)
T ss_pred HHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence 6554433333 3457789999999999998888888888899999999988664
No 77
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=9.5e-46 Score=353.26 Aligned_cols=254 Identities=23% Similarity=0.308 Sum_probs=211.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+|++.+.||+|+||.||+|++..+++.||||++++.. ...+....|..++..+.|+ ++++.+++++...+.+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~----~~i~~~~~~~~~~~~~ 76 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP----PFLTQLHSCFQTMDRL 76 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC----CeEeeEEEEEecCCEE
Confidence 4899999999999999999999999999999997532 2233455677777766533 4568899999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~---------------- 138 (323)
T cd05616 77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG---------------- 138 (323)
T ss_pred EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC----------------
Confidence 9999999 999999988765 699999999999999999999999999999999999998776
Q ss_pred CCccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 139 -----------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~ 207 (323)
T cd05616 139 -----------HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 207 (323)
T ss_pred -----------cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH
Confidence 56777777665422 1223457899999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccccC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~~ 387 (411)
+....+......+|. ..+..+.+++.+||+.+ |.+|++ ..++++|+||..+++..
T Consensus 208 ~~~~~i~~~~~~~p~----~~s~~~~~li~~~l~~~----p~~R~~~~~~~~~~i~~h~~~~~~~~~~ 267 (323)
T cd05616 208 ELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKH----PGKRLGCGPEGERDIKEHAFFRYIDWEK 267 (323)
T ss_pred HHHHHHHhCCCCCCC----cCCHHHHHHHHHHcccC----HHhcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 777777665555554 45778999999999999 556654 58999999999877544
No 78
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.7e-46 Score=361.05 Aligned_cols=258 Identities=21% Similarity=0.339 Sum_probs=212.6
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|++.+.||+|+||.||+|+++.+++.||+|++.+.. .....+.+|+.+++.++|+++ +++++.+..++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~~~ 116 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFYAFQDDR 116 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEcCC
Confidence 478999999999999999999999999999999986422 233456789999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~-------------- 179 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG-------------- 179 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--------------
Confidence 999999999 99999998765 489999999999999999999999999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCCC----CCccchhHHHHHHHHHHHhCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~elltg~~p 317 (411)
.+||+|||++...... .....||+.|+|||++.+.. ++.++|||||||++|||++|..|
T Consensus 180 -------------~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~P 246 (371)
T cd05622 180 -------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 246 (371)
T ss_pred -------------CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCC
Confidence 6788888877654322 22457999999999997643 78999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
|.+.+.......+......++......++..++++|..||. ++.. ...|+++.++++|+||.+..+
T Consensus 247 f~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~-~~~~-r~~r~~~~ei~~h~~~~~~~~ 312 (371)
T cd05622 247 FYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREV-RLGRNGVEEIKRHLFFKNDQW 312 (371)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcC-Chhh-hcCCCCHHHHhcCcccCCCCh
Confidence 99888777776666543322222234578889999999997 4222 223789999999999988543
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=6.8e-46 Score=353.12 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=204.7
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|+++.+++.||+|+++... ........|..++..+ .|+++ +++++++.+.+++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFL-----THLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCc-----cCeeEEEEeCCEEEEEE
Confidence 47999999999999999999999999997532 2334456677777654 45555 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~-------------------- 133 (316)
T cd05620 76 EFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG-------------------- 133 (316)
T ss_pred CCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--------------------
Confidence 999 999999988764 689999999999999999999999999999999999998776
Q ss_pred ccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+...
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~ 206 (316)
T cd05620 134 -------HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFE 206 (316)
T ss_pred -------CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 5667777765432 122234578999999999999999999999999999999999999999887777666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH-HHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM-RAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~-~~il~~~~~~~~~~~ 386 (411)
.+......+|. .++..++++|.+||..| |++|+++ .++++|+||..+++.
T Consensus 207 ~~~~~~~~~~~----~~~~~~~~li~~~l~~d----P~~R~~~~~~~~~h~~f~~~~~~ 257 (316)
T cd05620 207 SIRVDTPHYPR----WITKESKDILEKLFERD----PTRRLGVVGNIRGHPFFKTINWT 257 (316)
T ss_pred HHHhCCCCCCC----CCCHHHHHHHHHHccCC----HHHcCCChHHHHcCCCcCCCCHH
Confidence 66554444443 35678899999999999 9999987 588899999987654
No 80
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2e-45 Score=355.64 Aligned_cols=263 Identities=26% Similarity=0.434 Sum_probs=212.2
Q ss_pred ceEEeeCC---ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcc
Q 015222 81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR 154 (411)
Q Consensus 81 ~~~~~~~~---~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~ 154 (411)
.+.+..++ .+.++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++|+|+
T Consensus 3 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni---- 78 (355)
T cd07874 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI---- 78 (355)
T ss_pred ceeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCch----
Confidence 34555555 3568999999999999999999999999999999998743 2334567789999999998887
Q ss_pred eEEEeeeeecC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 015222 155 CVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228 (411)
Q Consensus 155 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~ 228 (411)
+++++++... ...|+||||+.++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 79 -v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~ 153 (355)
T cd07874 79 -ISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 153 (355)
T ss_pred -hceeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC
Confidence 8888887543 35799999998788888754 488999999999999999999999999999999999997
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHH
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
.++ .+||+|||++...... .....||..|+|||++.+..++.++|||||||
T Consensus 154 ~~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~ 206 (355)
T cd07874 154 SDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206 (355)
T ss_pred CCC---------------------------CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHH
Confidence 766 5788888877654332 23357899999999999989999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHH--------------------------------------Hhhhhh
Q 015222 307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMV--------------------------------------IRADRR 348 (411)
Q Consensus 307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~--------------------------------------~~~~~~ 348 (411)
++|+|++|+.||.+.+..+....+....+.....+. ...+..
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T cd07874 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 286 (355)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchH
Confidence 999999999999987766555544433332221111 112345
Q ss_pred hhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcc
Q 015222 349 AEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVI 383 (411)
Q Consensus 349 ~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~ 383 (411)
+.++|.+||..| |.+|||+.++++||||...
T Consensus 287 ~~~li~~mL~~d----P~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 287 ARDLLSKMLVID----PAKRISVDEALQHPYINVW 317 (355)
T ss_pred HHHHHHHHhcCC----chhcCCHHHHhcCcchhcc
Confidence 789999999999 9999999999999999744
No 81
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-46 Score=353.29 Aligned_cols=246 Identities=26% Similarity=0.384 Sum_probs=202.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC-eE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~-~~ 168 (411)
...+.+.||.|+||+||+|.++.+.. ||||++.... ...+.+.+|+.+|.+++|||| |++++++.... .+
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~-vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~f~G~~~~~~~~~ 115 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDV-VAVKIISDPDFDDESRKAFRREASLLSRLRHPNI-----VQFYGACTSPPGSL 115 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCcee-EEEEEecchhcChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCCce
Confidence 45566779999999999998764332 9999997533 225689999999999999988 99999999877 79
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
++||||+ +|+|.+++.+.....++...+..++.||++||+|||+++ ||||||||+|||++.++
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~--------------- 180 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG--------------- 180 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC---------------
Confidence 9999999 999999998843458999999999999999999999999 99999999999997653
Q ss_pred CCCccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceec--CCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL--GLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++||+|||+++.... ..+...||+.|||||++. ...|+.++||||||++||||+||+.||.+.
T Consensus 181 -----------~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~ 249 (362)
T KOG0192|consen 181 -----------KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDL 249 (362)
T ss_pred -----------CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCC
Confidence 2688899998877653 334468999999999999 558999999999999999999999999998
Q ss_pred ChHHHHHHHHHH--hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 322 ENLEHLAMMERV--LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 322 ~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...+....+... ...+|. .+++.+..++.+ ||..+|..||++.+++..+
T Consensus 250 ~~~~~~~~v~~~~~Rp~~p~----~~~~~l~~l~~~----CW~~dp~~RP~f~ei~~~l 300 (362)
T KOG0192|consen 250 APVQVASAVVVGGLRPPIPK----ECPPHLSSLMER----CWLVDPSRRPSFLEIVSRL 300 (362)
T ss_pred CHHHHHHHHHhcCCCCCCCc----cCCHHHHHHHHH----hCCCCCCcCCCHHHHHHHH
Confidence 875544444322 122232 256667777776 5777799999999998754
No 82
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=6.5e-46 Score=354.08 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=207.4
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|+++.+++.||||+++... ...+.+..|..++..+ .|+++ +++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i-----~~~~~~~~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFL-----TALHCCFQTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCeEEEEE
Confidence 46899999999999999999999999997532 2334566788888765 45555 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~-------------------- 133 (321)
T cd05591 76 EYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG-------------------- 133 (321)
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--------------------
Confidence 999 899999988765 699999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+.
T Consensus 134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~ 206 (321)
T cd05591 134 -------HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFE 206 (321)
T ss_pred -------CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHH
Confidence 567777777654221 1233578999999999999899999999999999999999999999888877777
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-------HHHHHHhcCCCCcccccC
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-------SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-------t~~~il~~~~~~~~~~~~ 387 (411)
.+......+|. ..+..+.++|.+||..+ |.+|+ ++.++++|+||..+++..
T Consensus 207 ~i~~~~~~~p~----~~~~~~~~ll~~~L~~d----p~~R~~~~~~~~~~~~~~~hp~~~~~~~~~ 264 (321)
T cd05591 207 SILHDDVLYPV----WLSKEAVSILKAFMTKN----PNKRLGCVASQGGEDAIKQHPFFKEIDWVL 264 (321)
T ss_pred HHHcCCCCCCC----CCCHHHHHHHHHHhccC----HHHcCCCCCCCCCHHHHhcCCccCCCCHHH
Confidence 77665444443 25678899999999999 66776 999999999998876543
No 83
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=3.3e-46 Score=356.68 Aligned_cols=247 Identities=21% Similarity=0.340 Sum_probs=207.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+.||+|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+.|++| +++++++...+.+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i-----~~~~~~~~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL-----TALKYSFQTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----CceEEEEEcCCEEEEEEe
Confidence 46899999999999999999999999997532 233456678899998888877 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
|+ +++|.+++.... .+++..++.++.||+.||+|||+ +||+||||||+|||++.+|
T Consensus 76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~-------------------- 133 (325)
T cd05594 76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG-------------------- 133 (325)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--------------------
Confidence 99 999999887765 69999999999999999999997 7999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus 134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~ 206 (325)
T cd05594 134 -------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE 206 (325)
T ss_pred -------CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH
Confidence 567777777654221 1233579999999999999899999999999999999999999998877766666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~ 386 (411)
.+......+|. .++..+.++|.+||+.| |.+|+ ++.++++|+||.++.+.
T Consensus 207 ~i~~~~~~~p~----~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 207 LILMEEIRFPR----TLSPEAKSLLSGLLKKD----PKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred HHhcCCCCCCC----CCCHHHHHHHHHHhhcC----HHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 65544444443 35678899999999999 77775 99999999999987654
No 84
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.4e-45 Score=344.39 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.1
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-----
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----- 164 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----- 164 (411)
+|++.+.||+|+||+||+|+++.+++.||+|.++... .......+|+.+++.+.+ +.|+|++++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~--~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA--FDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh--cCCCCeeeeeeeeccccCCC
Confidence 5999999999999999999999999999999987432 223356678888887742 234555999998764
Q ss_pred CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
...+++|||++.++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 79 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~------------- 145 (288)
T cd07863 79 ETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG------------- 145 (288)
T ss_pred CceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-------------
Confidence 3468999999977999999876545699999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||++...... .....||..|+|||++.+..++.++|||||||++|+|++|.+||.+..
T Consensus 146 --------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~ 211 (288)
T cd07863 146 --------------QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 211 (288)
T ss_pred --------------CEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence 5677777776654322 223468999999999998899999999999999999999999998887
Q ss_pred hHHHHHHHHHHhCCCC-----------------------hhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 323 NLEHLAMMERVLGPLP-----------------------HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p-----------------------~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
..+.+..+....+... ....+.++..+.++|.+||..| |.+||++.+++.|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d----P~~R~t~~~~l~hp~ 287 (288)
T cd07863 212 EADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFN----PHKRISAFRALQHPF 287 (288)
T ss_pred HHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccC----cccCCCHHHHhcCCC
Confidence 7766666655432111 1122345677889999999999 999999999999999
Q ss_pred C
Q 015222 380 L 380 (411)
Q Consensus 380 ~ 380 (411)
|
T Consensus 288 f 288 (288)
T cd07863 288 F 288 (288)
T ss_pred C
Confidence 7
No 85
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=6.8e-46 Score=354.55 Aligned_cols=250 Identities=22% Similarity=0.316 Sum_probs=206.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHH-HHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|.++.+|+.||+|++.... .....+..|.. +++.+.|+|| +++++.+...+..|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~i-----v~~~~~~~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEecCCEEEEEE
Confidence 46899999999999999999999999997532 22233444544 3555666666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~-------------------- 133 (325)
T cd05604 76 DFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG-------------------- 133 (325)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--------------------
Confidence 999 999999887654 799999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...
T Consensus 134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~ 206 (325)
T cd05604 134 -------HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYD 206 (325)
T ss_pred -------CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHH
Confidence 56777777765421 12234579999999999999999999999999999999999999999887776666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.+.......+ ...+..+.++|.+||+.||.+||+.|+++.++++|+||..+.+
T Consensus 207 ~~~~~~~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~ 259 (325)
T cd05604 207 NILHKPLVLR----PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSW 259 (325)
T ss_pred HHHcCCccCC----CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence 6554332222 2456778899999999999999999999999999999997654
No 86
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.9e-45 Score=351.02 Aligned_cols=257 Identities=24% Similarity=0.360 Sum_probs=210.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.++|++++.||+|+||.||+|++..++..||+|++... ....+.+.+|++++++++|+|+ +++++++..++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEECCEE
Confidence 46899999999999999999999999999999998753 2345678899999999988887 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
++||||+ +++|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--------------- 141 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--------------- 141 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC---------------
Confidence 9999999 899999998765 689999999999999999999986 699999999999998776
Q ss_pred CCCccccCCCCCCeeEeecCCcccccC-CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++..... ......||..|+|||++.+..++.++|||||||++|||++|+.||...+..+
T Consensus 142 ------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~ 209 (331)
T cd06649 142 ------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE 209 (331)
T ss_pred ------------cEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 567777776654322 2234578999999999999899999999999999999999999997655443
Q ss_pred HHHHHHHH-------------------------------------------h-CCCChhHHHhhhhhhhhhhccCCccCC
Q 015222 326 HLAMMERV-------------------------------------------L-GPLPHHMVIRADRRAEKYFRRGARLDW 361 (411)
Q Consensus 326 ~~~~i~~~-------------------------------------------~-~~~p~~~~~~~~~~~~~li~~~l~~~~ 361 (411)
....+... . ...+.......+..+.+||.+||..|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~- 288 (331)
T cd06649 210 LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN- 288 (331)
T ss_pred HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC-
Confidence 32221110 0 00011111134667899999999999
Q ss_pred CCCCCcHHHHHHHHhcCCCCcccc
Q 015222 362 PDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 362 ~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
|++|||+.++++|+||.....
T Consensus 289 ---P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 289 ---PAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred ---cccCCCHHHHhcChHHhhccc
Confidence 999999999999999987543
No 87
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.1e-45 Score=349.78 Aligned_cols=247 Identities=25% Similarity=0.343 Sum_probs=203.6
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|++..+++.||||+++... ...+....|..++..+ .|++| +++++++..++.+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL-----THLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence 46999999999999999999999999997532 2233445566666543 45554 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 76 e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~-------------------- 133 (316)
T cd05592 76 EYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG-------------------- 133 (316)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--------------------
Confidence 999 999999998765 699999999999999999999999999999999999997766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+...
T Consensus 134 -------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~ 206 (316)
T cd05592 134 -------HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFD 206 (316)
T ss_pred -------CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 56777777775432 12234579999999999999899999999999999999999999999888777776
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH-HHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM-RAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~-~~il~~~~~~~~~~~ 386 (411)
.+......+|. .++..+.+++.+||..+ |.+|+++ .++++|+||..+++.
T Consensus 207 ~i~~~~~~~~~----~~~~~~~~ll~~~l~~~----P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05592 207 SILNDRPHFPR----WISKEAKDCLSKLFERD----PTKRLGVDGDIRQHPFFRGIDWE 257 (316)
T ss_pred HHHcCCCCCCC----CCCHHHHHHHHHHccCC----HHHcCCChHHHHcCcccCCCCHH
Confidence 66554444443 35677899999999998 8888875 588899999987653
No 88
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2.1e-45 Score=349.65 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=205.0
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|++..+++.||||+++... ........|..++..+ .|+++ +++++++.+.+.+++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcC-----cceEEEEEeCCEEEEEE
Confidence 46999999999999999999999999997532 2234455677777654 56655 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~-------------------- 133 (316)
T cd05619 76 EYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG-------------------- 133 (316)
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--------------------
Confidence 999 999999998754 689999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~ 206 (316)
T cd05619 134 -------HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQ 206 (316)
T ss_pred -------CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 56777777665321 12234578999999999999899999999999999999999999999887777666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHH-HHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR-AVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~-~il~~~~~~~~~~~ 386 (411)
.+......+|. ..+..+.++|.+||..+ |.+|+++. ++++|+||..+++.
T Consensus 207 ~i~~~~~~~~~----~~~~~~~~li~~~l~~~----P~~R~~~~~~l~~h~~~~~~~~~ 257 (316)
T cd05619 207 SIRMDNPCYPR----WLTREAKDILVKLFVRE----PERRLGVKGDIRQHPFFREIDWS 257 (316)
T ss_pred HHHhCCCCCCc----cCCHHHHHHHHHHhccC----HhhcCCChHHHHcCcccCCCCHH
Confidence 65544333332 35678899999999999 88888886 89999999998764
No 89
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2e-45 Score=343.90 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=202.8
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||+|+||+||+|.++.+++.||+|++.... ...+.+..|+.+++.++|+++ +++.+++..++..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-----VSLAYAFQTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-----eeeeEEEcCCCeEEEEEeCC
Confidence 699999999999999999999999986432 123456789999999988776 99999999999999999999
Q ss_pred -CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 176 -GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 176 -~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
+++|.+++... ....+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--------------------- 134 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--------------------- 134 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC---------------------
Confidence 99999887542 224689999999999999999999999999999999999997766
Q ss_pred cCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 135 ------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~ 208 (280)
T cd05608 135 ------NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 208 (280)
T ss_pred ------CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHH
Confidence 5777888877543322 2234789999999999999999999999999999999999999986543322222
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccC
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~ 387 (411)
+.......+..+...++..+.+++.+||+.+ |++|+ +++++++|+||+++.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~~l~h~~~~~~~~~~ 267 (280)
T cd05608 209 LKQRILNDSVTYPDKFSPASKSFCEALLAKD----PEKRLGFRDGNCDGLRTHPLFRDLNWRQ 267 (280)
T ss_pred HHHhhcccCCCCcccCCHHHHHHHHHHhcCC----HHHhcCCCCCCHHHHhcChhhhcCCHhH
Confidence 2222112222333456788999999999999 77776 899999999999877654
No 90
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-47 Score=351.90 Aligned_cols=283 Identities=20% Similarity=0.306 Sum_probs=248.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.+.|+.-+.||+||||.|+-++-+.||+.+|+|.+.+. ........+|-.||++++.+.| |.+--.|+..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~Fi-----VslaYAfeTkd 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFI-----VSLAYAFETKD 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcE-----EEEeeeecCCC
Confidence 45788999999999999999999999999999988642 2445667889999999988866 99888899999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+||..| ||+|.-.|...+...+++..++.++.+|+.||++||..+||.|||||+|||+|+.|
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G-------------- 324 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG-------------- 324 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--------------
Confidence 999999999 99999888887777899999999999999999999999999999999999998877
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
+++|+|+|+|....... ...+||.+|||||++.++.|+...|+|||||+||||+.|+.||.....
T Consensus 325 -------------hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~Ke 391 (591)
T KOG0986|consen 325 -------------HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKE 391 (591)
T ss_pred -------------CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhh
Confidence 67888888887654433 345899999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH-HHHHHHHhcCCCCcccccCCCCCchh-hHHHHHH
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR-DSMRAVWKLLRLPVIDLYSASPNCLC-KFYAITH 401 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R-~t~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~ 401 (411)
...-+.+.+.....+..++...+++++++++.+|.+|+.+|-..| -.++++.+||+|++++|....-+.+. +|.+..+
T Consensus 392 Kvk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~ 471 (591)
T KOG0986|consen 392 KVKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPG 471 (591)
T ss_pred hhhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCcc
Confidence 776767777777888888889999999999999999988887777 78999999999999999998888777 6666666
Q ss_pred HHhh
Q 015222 402 CLLC 405 (411)
Q Consensus 402 ~~~~ 405 (411)
...|
T Consensus 472 aVya 475 (591)
T KOG0986|consen 472 AVYA 475 (591)
T ss_pred ccch
Confidence 5554
No 91
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3e-45 Score=349.70 Aligned_cols=257 Identities=22% Similarity=0.294 Sum_probs=211.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+|++.+.||+|+||+||+|+++.+++.||+|++.+.. ...+.+..|..++..+.|++ +++++++++...+.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~ 76 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP----FLTQLHSCFQTVDRL 76 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC----chhheeeEEecCCEE
Confidence 4788999999999999999999999999999997532 22345667888888876643 347888999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~---------------- 138 (323)
T cd05615 77 YFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG---------------- 138 (323)
T ss_pred EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC----------------
Confidence 9999999 999999998765 699999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 139 -----------~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~ 207 (323)
T cd05615 139 -----------HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 207 (323)
T ss_pred -----------CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH
Confidence 567777777654321 123356899999999999989999999999999999999999999988877
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH-HHHHHHHhcCCCCccccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR-DSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R-~t~~~il~~~~~~~~~~~ 386 (411)
.....+.......|. ..+..+.+++.+||..+|.+|+... ...+++++|+||..+++.
T Consensus 208 ~~~~~i~~~~~~~p~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~ 266 (323)
T cd05615 208 ELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWD 266 (323)
T ss_pred HHHHHHHhCCCCCCc----cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHH
Confidence 777777665544443 3567889999999999944433322 236899999999998753
No 92
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.8e-45 Score=351.15 Aligned_cols=258 Identities=26% Similarity=0.383 Sum_probs=210.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||+||++++..+++.||+|++.+.. ...+.+.+|+.+++.+.|++| +.+++++..+++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI-----TNLHYAFQDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CceEEEEecCCe
Confidence 47999999999999999999999999999999997422 233457789999998888877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--------------- 139 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--------------- 139 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC---------------
Confidence 99999999 999999997643 3699999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++....... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 140 ------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~P 207 (331)
T cd05597 140 ------------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETP 207 (331)
T ss_pred ------------CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCC
Confidence 67888888775433221 22468999999999873 3578899999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 318 FQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
|.+.+..+....+..... .++.. ...++..+++++.+||.. +..+..|++++++++|+||.+.++
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~li~~ll~~--~~~r~~r~~~~~~l~hp~~~~~~~ 274 (331)
T cd05597 208 FYAESLVETYGKIMNHKEHFQFPPD-VTDVSEEAKDLIRRLICS--PETRLGRNGLQDFKDHPFFEGIDW 274 (331)
T ss_pred CCCCCHHHHHHHHHcCCCcccCCCc-cCCCCHHHHHHHHHHccC--cccccCCCCHHHHhcCCCCCCCCH
Confidence 988777666665544322 22222 234678899999998854 333556899999999999988654
No 93
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.8e-45 Score=350.00 Aligned_cols=247 Identities=22% Similarity=0.344 Sum_probs=207.2
Q ss_pred EeeeccccceEEEEEEeC---CCCcEEEEEEeccch-----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 97 LSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++.||+|+||.||+|++. .+++.||+|+++... .....+.+|+.+++.+.|+|| +++++.+..++.+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI-----VDLIYAFQTGGKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCch-----hceeeEEecCCeE
Confidence 368999999999999864 478899999997532 223456789999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.+.. .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~---------------- 137 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG---------------- 137 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC----------------
Confidence 9999999 899999998765 688999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..
T Consensus 138 -----------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~ 206 (323)
T cd05584 138 -----------HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK 206 (323)
T ss_pred -----------CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH
Confidence 567777777653221 123357899999999999988999999999999999999999999988877
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDL 385 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~ 385 (411)
..+..+......+|. ..+..+.++|.+||+.+ |++|+ ++.++++|+||....+
T Consensus 207 ~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~----p~~R~~~~~~~~~~l~~h~~~~~~~~ 264 (323)
T cd05584 207 KTIDKILKGKLNLPP----YLTPEARDLLKKLLKRN----PSSRLGAGPGDAAEVQSHPFFRHVNW 264 (323)
T ss_pred HHHHHHHcCCCCCCC----CCCHHHHHHHHHHcccC----HhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 766666655444443 35677899999999999 77777 8999999999987654
No 94
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.6e-45 Score=352.48 Aligned_cols=247 Identities=20% Similarity=0.321 Sum_probs=200.0
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|++..+++.||+|++++.. .....+..|..++..+ +|++| +++++++.+.+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~I-----v~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFL-----VGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCC-----CceEEEEEcCCEEEEEE
Confidence 46899999999999999999999999997532 2334567889998888 46666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~-------------------- 133 (329)
T cd05588 76 EFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG-------------------- 133 (329)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--------------------
Confidence 999 999999987664 799999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC------
Q 015222 252 KNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------ 322 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~------ 322 (411)
.++|+|||++... ........||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 134 -------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~ 206 (329)
T cd05588 134 -------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD 206 (329)
T ss_pred -------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccccccccc
Confidence 5677777766532 112234579999999999999999999999999999999999999996321
Q ss_pred --hH-HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH------HHHHHhcCCCCccccc
Q 015222 323 --NL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS------MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 323 --~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t------~~~il~~~~~~~~~~~ 386 (411)
.. .....+......+| ..++..+.++|.+||+.| |.+|++ +.++++|+||.++++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~~i~~hp~~~~~~~~ 271 (329)
T cd05588 207 QNTEDYLFQVILEKQIRIP----RSLSVKASSVLKGFLNKD----PKERLGCHPQTGFRDIKSHPFFRNIDWD 271 (329)
T ss_pred ccchHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhccC----HHHcCCCCCCCCHHHHhcCCCCCCCCHH
Confidence 11 12222333222333 345677899999999999 666665 8999999999987653
No 95
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.4e-45 Score=355.37 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=210.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC---
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--- 166 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--- 166 (411)
+|++.++||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.++|+|| +++++++...+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~ 75 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV-----LSALDILQPPHIDP 75 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCc-----CCHhheecCCCccc
Confidence 478899999999999999999999999999998642 2234567889999999998887 99999988766
Q ss_pred --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 167 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
..|+||||++++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~------------- 140 (372)
T cd07853 76 FEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC------------- 140 (372)
T ss_pred cceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC-------------
Confidence 899999999889999887654 699999999999999999999999999999999999998776
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.+||+|||++...... .....+|..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 141 --------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 141 --------------VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred --------------CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 5667777766543221 1224678999999999875 58999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCChhH----------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHH
Q 015222 320 THENLEHLAMMERVLGPLPHHM----------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSM 371 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~----------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~ 371 (411)
+.+..+.+..+....+..+... ....++.+.++|.+||..| |.+|||+
T Consensus 207 ~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d----P~~R~t~ 282 (372)
T cd07853 207 AQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFD----PDKRISA 282 (372)
T ss_pred CCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCC----hhhCcCH
Confidence 8887777776665544332211 1123567889999999999 9999999
Q ss_pred HHHHhcCCCCccc
Q 015222 372 RAVWKLLRLPVID 384 (411)
Q Consensus 372 ~~il~~~~~~~~~ 384 (411)
.++++|+||.+..
T Consensus 283 ~e~l~hp~~~~~~ 295 (372)
T cd07853 283 ADALAHPYLDEGR 295 (372)
T ss_pred HHHhcCHhhCCCc
Confidence 9999999998754
No 96
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3e-45 Score=348.98 Aligned_cols=246 Identities=23% Similarity=0.326 Sum_probs=206.9
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|.+..+++.||||++++.. .....+..|..+++.+. |+++ +++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i-----~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL-----TQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence 46999999999999999999999999997532 23345667888888773 5555 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~-------------------- 133 (318)
T cd05570 76 EYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG-------------------- 133 (318)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--------------------
Confidence 999 999999988764 699999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+...
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~ 206 (318)
T cd05570 134 -------HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQ 206 (318)
T ss_pred -------cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHH
Confidence 56777777665321 11233568999999999999999999999999999999999999999887777666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH-----HHHHhcCCCCcccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM-----RAVWKLLRLPVIDL 385 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~-----~~il~~~~~~~~~~ 385 (411)
.+......+|. ..+..+.++|.+||..| |.+|+++ .++++|+||.++++
T Consensus 207 ~i~~~~~~~~~----~~~~~~~~li~~~l~~d----P~~R~s~~~~~~~~ll~~~~~~~~~~ 260 (318)
T cd05570 207 SILEDEVRYPR----WLSKEAKSILKSFLTKN----PEKRLGCLPTGEQDIKGHPFFREIDW 260 (318)
T ss_pred HHHcCCCCCCC----cCCHHHHHHHHHHccCC----HHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence 66554444443 45678899999999999 9999998 99999999998765
No 97
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.7e-45 Score=349.45 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=205.6
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHH-HHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|++..+++.||+|++..... ....+..|.. +++.+.|++| +++++++...+.+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~I-----v~~~~~~~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL-----VGLHFSFQTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCC-----CceeEEEEcCCeEEEEE
Confidence 469999999999999999999999999975321 1223333433 4566666666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~-------------------- 133 (325)
T cd05602 76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG-------------------- 133 (325)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--------------------
Confidence 999 899999998754 688999999999999999999999999999999999997766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+.
T Consensus 134 -------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 206 (325)
T cd05602 134 -------HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 206 (325)
T ss_pred -------CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHH
Confidence 56777777765421 12234579999999999999999999999999999999999999999887777666
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.+.......+ ..++..+.++|.+||+.||.+|++..+.+.++++|+||..+++
T Consensus 207 ~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~ 259 (325)
T cd05602 207 NILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINW 259 (325)
T ss_pred HHHhCCcCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence 6654333332 3567889999999999998888888888889999999987654
No 98
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=4.8e-45 Score=342.26 Aligned_cols=258 Identities=22% Similarity=0.344 Sum_probs=210.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .....+.+|+.++++++|+++ +.+++.+.+++..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFV-----VSLAYAYETKDAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCe-----eeeeEEEecCCEE
Confidence 3788899999999999999999999999999986432 223446679999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~---------------- 139 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG---------------- 139 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC----------------
Confidence 9999999 89999998765545699999999999999999999999999999999999997665
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++....... ....||..|+|||++.+..++.++|||||||++|+|++|+.||.......
T Consensus 140 -----------~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 140 -----------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred -----------CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 57788888776543222 23478999999999999899999999999999999999999998754322
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~ 386 (411)
............+.......+..+.+++.+||+.| |.+|++ ++++++|+||..+++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~R~s~~~~~~~~~~~h~~~~~~~~~ 270 (285)
T cd05630 209 KREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKD----PKERLGCQGGGAREVKEHPLFKQINFK 270 (285)
T ss_pred hHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcC----HHHccCCCCCchHHHHcChhhhccCHH
Confidence 22222222222222333456778899999999999 999998 9999999999876543
No 99
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-46 Score=353.74 Aligned_cols=250 Identities=28% Similarity=0.487 Sum_probs=223.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe-
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH- 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~- 167 (411)
++|.+++++|+|+||.+++++++..+..||+|.+.- ....++.+.+|+.+++++.|||| |.+.+.|..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~i-----v~y~ds~~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNI-----VEYKDSFEEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCe-----eeeccchhcCCce
Confidence 579999999999999999999999999999999963 33455678899999999999988 999999998887
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+||||+|| ||+|.+.+.+.....++++.+..++.|++.|+.|||+++|+|||||+.|||++.++
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--------------- 143 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--------------- 143 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC---------------
Confidence 99999999 99999999987777899999999999999999999999999999999999987765
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.|+|+|||+|+...... .+.+||+.||+||++.+.+|+.|+|||||||++|||++-+++|.+.+.
T Consensus 144 ------------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m 211 (426)
T KOG0589|consen 144 ------------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM 211 (426)
T ss_pred ------------ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence 67889999988766543 557999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 324 LEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 324 ~~~~~~i~~~~-~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
.....+|.+.. .++|. .++.+++.+++.||..+ |..||++.++|.+|.+.
T Consensus 212 ~~Li~ki~~~~~~Plp~----~ys~el~~lv~~~l~~~----P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 212 SELILKINRGLYSPLPS----MYSSELRSLVKSMLRKN----PEHRPSALELLRRPHLL 262 (426)
T ss_pred HHHHHHHhhccCCCCCc----cccHHHHHHHHHHhhcC----CccCCCHHHHhhChhhh
Confidence 88888888776 34443 45778999999999999 99999999999997766
No 100
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.5e-45 Score=350.49 Aligned_cols=259 Identities=24% Similarity=0.360 Sum_probs=210.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||+||+++++.+++.||+|++.+.. .....+.+|..++..+.|++| +.+++++.+.+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~l~~~~~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWI-----TTLHYAFQDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence 47999999999999999999999999999999987532 223446778888888877766 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.|+||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--------------- 139 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--------------- 139 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC---------------
Confidence 99999999 999999998743 3689999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 140 ------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~P 207 (331)
T cd05624 140 ------------HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 207 (331)
T ss_pred ------------CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCC
Confidence 56777777775443221 22469999999999876 4678999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 318 FQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
|.+.+..+.+..+..... .+|... ..+++.+++++.+||..+ .+ ...|++++++++|+||.++++.
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~p~~~-~~~~~~~~~li~~ll~~~-~~-~~~~~~~~~~~~h~~f~~~~~~ 275 (331)
T cd05624 208 FYAESLVETYGKIMNHEERFQFPSHI-TDVSEEAKDLIQRLICSR-ER-RLGQNGIEDFKKHAFFEGIDWE 275 (331)
T ss_pred ccCCCHHHHHHHHHcCCCcccCCCcc-ccCCHHHHHHHHHHccCc-hh-hcCCCCHHHHhcCCCcCCCCHH
Confidence 998777666666554322 233322 356788999999998754 22 2336799999999999987653
No 101
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.4e-45 Score=353.17 Aligned_cols=252 Identities=22% Similarity=0.344 Sum_probs=205.4
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||+|+||+||+|+++.+++.||||++.+... .......|..++..+... .|++++.+++.+...+.+|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~p~i~~~~~~~~~~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLD--ESPFIVGLKFSFQTDSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccC--CCCcCcceEEEEecCCeEEEEEcCC
Confidence 7999999999999999999999999864321 222344566666655311 2345599999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 79 ~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~----------------------- 133 (330)
T cd05586 79 SGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG----------------------- 133 (330)
T ss_pred CCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC-----------------------
Confidence 999999988765 699999999999999999999999999999999999998766
Q ss_pred CCCCCeeEeecCCcccccC---CCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMM 330 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i 330 (411)
.++|+|||++..... ......||..|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+....+
T Consensus 134 ----~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i 209 (330)
T cd05586 134 ----HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNI 209 (330)
T ss_pred ----CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHH
Confidence 567777877654221 12345799999999999765 5899999999999999999999999987777766666
Q ss_pred HHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
......++.. .+++.+.++|.+||..+|.+||+.++++.++++|+||.+.++
T Consensus 210 ~~~~~~~~~~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~ 261 (330)
T cd05586 210 AFGKVRFPKN---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDW 261 (330)
T ss_pred HcCCCCCCCc---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCH
Confidence 5544444432 357788999999999998888888889999999999988653
No 102
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.6e-44 Score=341.23 Aligned_cols=256 Identities=28% Similarity=0.451 Sum_probs=212.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.++||+|+||.||+|.++.+++.||+|.++... .....+.+|+.+++.+.|+|| +++++++...+..+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----~~~~~~~~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIIHTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCc-----ceEEEEEecCCeEE
Confidence 57999999999999999999999999999999986432 233457789999999988887 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||+.++|.+++.... ..+++..+..++.||+.||+|||+.||+|+||||+|||++.++
T Consensus 81 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~------------------ 141 (301)
T cd07873 81 LVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG------------------ 141 (301)
T ss_pred EEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC------------------
Confidence 999999889999987654 3689999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 142 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~ 212 (301)
T cd07873 142 ---------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE 212 (301)
T ss_pred ---------cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5677777766543221 1224578899999998765 58899999999999999999999999887776
Q ss_pred HHHHHHHHhCCCChh--------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 326 HLAMMERVLGPLPHH--------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~--------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
....+....+..... ....+++.++++|.+||..+ |.+|+|+.++++|+|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d----p~~R~t~~eil~h~~ 288 (301)
T cd07873 213 QLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFE----GRKRISAEEAMKHPY 288 (301)
T ss_pred HHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCC----cccCcCHHHHhcCcc
Confidence 666655544322211 11235667889999999999 999999999999999
Q ss_pred CCccc
Q 015222 380 LPVID 384 (411)
Q Consensus 380 ~~~~~ 384 (411)
|....
T Consensus 289 f~~~~ 293 (301)
T cd07873 289 FHCLG 293 (301)
T ss_pred ccccc
Confidence 98765
No 103
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5.3e-45 Score=347.81 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=206.2
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHH-HHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~-~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|++..+++.||+|++.+.. .....+..|.. +++.+.|+|+ +++++.+.+.+..|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~i-----v~~~~~~~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFL-----VGLHYSFQTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCEEEEEE
Confidence 47999999999999999999999999997432 22233444443 5667777766 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+.+.... .+++..+..++.||+.||+|||++||+||||||+|||++.+|
T Consensus 76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~-------------------- 133 (321)
T cd05603 76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG-------------------- 133 (321)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--------------------
Confidence 999 899998887654 689999999999999999999999999999999999998776
Q ss_pred ccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+...
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 206 (321)
T cd05603 134 -------HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYD 206 (321)
T ss_pred -------CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHH
Confidence 567777776654211 1233578999999999998899999999999999999999999999877666665
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.+......+| ...+..+.++|.+||+.++.+|++.++++.++++|+||..+++.
T Consensus 207 ~i~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 207 NILHKPLQLP----GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred HHhcCCCCCC----CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 5554333333 34567789999999999988888888889999999999877653
No 104
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.7e-44 Score=354.88 Aligned_cols=250 Identities=24% Similarity=0.384 Sum_probs=199.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
...|.+.+.||+|+||.||+|.+..+++.||||.... ....+|+.++++++|+|| +++++++..++..++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnI-----v~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAV-----LALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCC-----CcEEEEEEECCEEEE
Confidence 4579999999999999999999999999999996432 335679999999998887 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||||+.++
T Consensus 238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~------------------- 297 (461)
T PHA03211 238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE------------------- 297 (461)
T ss_pred EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC-------------------
Confidence 99999889999987653 3699999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC---
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE--- 322 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~--- 322 (411)
.++|+|||++...... .....||..|+|||++.+..++.++|||||||+||||++|..|+-...
T Consensus 298 --------~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~ 369 (461)
T PHA03211 298 --------DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD 369 (461)
T ss_pred --------CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence 5677777766543221 123469999999999999999999999999999999999876543211
Q ss_pred -----hHHHHHHHHHHhC---CCChh----H--------------------H---HhhhhhhhhhhccCCccCCCCCCCc
Q 015222 323 -----NLEHLAMMERVLG---PLPHH----M--------------------V---IRADRRAEKYFRRGARLDWPDGATS 367 (411)
Q Consensus 323 -----~~~~~~~i~~~~~---~~p~~----~--------------------~---~~~~~~~~~li~~~l~~~~~~rp~~ 367 (411)
..+....+..... .++.. + + ...+..+.++|.+||..| |.+
T Consensus 370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~D----P~~ 445 (461)
T PHA03211 370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFD----GAR 445 (461)
T ss_pred ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccC----hhh
Confidence 1222233322211 11110 0 0 123457889999999999 999
Q ss_pred HHHHHHHHhcCCCCc
Q 015222 368 RDSMRAVWKLLRLPV 382 (411)
Q Consensus 368 R~t~~~il~~~~~~~ 382 (411)
|||+.|+|+|+||++
T Consensus 446 RPsa~elL~hp~f~~ 460 (461)
T PHA03211 446 RPSAAELLRLPLFQS 460 (461)
T ss_pred CcCHHHHhhCcccCC
Confidence 999999999999975
No 105
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.4e-45 Score=350.23 Aligned_cols=246 Identities=20% Similarity=0.318 Sum_probs=199.3
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|+++.+++.||+|++++.. .....+..|+.++.++ .|+++ +++++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcC-----CceeeEEEeCCEEEEEE
Confidence 46999999999999999999999999997532 2334567788888776 56666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~-------------------- 133 (329)
T cd05618 76 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-------------------- 133 (329)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--------------------
Confidence 999 999999887664 699999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC------
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------ 322 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~------ 322 (411)
.+||+|||++.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 134 -------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~ 206 (329)
T cd05618 134 -------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 206 (329)
T ss_pred -------CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc
Confidence 57777777765421 12234579999999999999999999999999999999999999995211
Q ss_pred ---hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH------HHHHHhcCCCCcccc
Q 015222 323 ---NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS------MRAVWKLLRLPVIDL 385 (411)
Q Consensus 323 ---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t------~~~il~~~~~~~~~~ 385 (411)
.......+......+| ...+..+.++|.+||+.| |.+|++ +.++++||||.++++
T Consensus 207 ~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~d----P~~R~~~~~~~~~~~i~~hp~f~~~~~ 270 (329)
T cd05618 207 QNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKD----PKERLGCHPQTGFADIQGHPFFRNVDW 270 (329)
T ss_pred cccHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCC----HHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence 1112222333223333 345677899999999999 666666 689999999998765
No 106
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=1.1e-45 Score=346.66 Aligned_cols=279 Identities=32% Similarity=0.589 Sum_probs=249.5
Q ss_pred CCCCCCCceEEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCC-CC
Q 015222 74 RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GG 152 (411)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i-~~ 152 (411)
..++..|+|.+.+|+.+..+|.|....|+|-||+|.+|.+...|..||||+++.+....+.-..|++||++|+...- ..
T Consensus 414 NWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk 493 (752)
T KOG0670|consen 414 NWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDK 493 (752)
T ss_pred CcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhh
Confidence 45777899999999999999999999999999999999999999999999999888777888899999999987554 34
Q ss_pred cceEEEeeeeecCCeEEEEEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 153 ~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
.||++++..|.+.+|+|||+|-+.-+|.++|.+.+ +..|....++.++.|+..||..|-..||+|.||||+||||+..
T Consensus 494 ~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~- 572 (752)
T KOG0670|consen 494 FHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNES- 572 (752)
T ss_pred hHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccC-
Confidence 68899999999999999999999999999998765 3468899999999999999999999999999999999999763
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-cccccCCCccccceecCCCCCccchhHHHHHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 310 (411)
...+||||||.|....... +.+.-+..|.|||++.|.+|+...|+||.||+|||
T Consensus 573 -------------------------k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYE 627 (752)
T KOG0670|consen 573 -------------------------KNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYE 627 (752)
T ss_pred -------------------------cceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEE
Confidence 4479999999998876554 33556778999999999999999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHh----------------------------------------------
Q 015222 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIR---------------------------------------------- 344 (411)
Q Consensus 311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~---------------------------------------------- 344 (411)
|.||+..|.|.++.+++..+..+.|.+|..+...
T Consensus 628 lYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~ 707 (752)
T KOG0670|consen 628 LYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIA 707 (752)
T ss_pred eeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhc
Confidence 9999999999999999999999999998766431
Q ss_pred ----------hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 345 ----------ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 345 ----------~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.-..+++||.+||.+| |++|.|..++|+||||..
T Consensus 708 ~q~~~deq~~~~~~~rdLLdkml~Ld----P~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 708 VQRLPDEQPKIVQQLRDLLDKMLILD----PEKRITVNQALKHPFITE 751 (752)
T ss_pred cCCCCchhHHHHHHHHHHHHHHhccC----hhhcCCHHHHhcCCcccC
Confidence 1135789999999999 999999999999999974
No 107
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-46 Score=353.33 Aligned_cols=244 Identities=23% Similarity=0.337 Sum_probs=206.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
.++.+++||+|.||.||+|.+..+. .||+|.++......+.+.+|+++|++|+|+++ |++++++..++.+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~l-----V~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMSPEAFLREAQIMKKLRHEKL-----VKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccChhHHHHHHHHHHhCcccCe-----EEEEEEEecCCceEEEE
Confidence 3556789999999999999887553 59999998877777889999999999999988 99999999988999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ .|+|.++|+......+...+...++.||++|++||+++++|||||-..||||+++.
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~-------------------- 340 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL-------------------- 340 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--------------------
Confidence 999 99999999986667899999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccccCCCcc----cccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHSY----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH 326 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~ 326 (411)
.+||+|||+|+....+... ..-...|.|||.+..+.++.+||||||||+||||+| |+.||.+.+..+.
T Consensus 341 -------~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev 413 (468)
T KOG0197|consen 341 -------VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV 413 (468)
T ss_pred -------eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH
Confidence 6777888888754433322 122567999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
++.+.++..-.. ++.+.+.|-..|..||..+|+.|||++.+..
T Consensus 414 ~~~le~GyRlp~-------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 414 LELLERGYRLPR-------PEGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred HHHHhccCcCCC-------CCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 999988643221 1234445555666779999999999996653
No 108
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6.4e-45 Score=348.82 Aligned_cols=259 Identities=25% Similarity=0.363 Sum_probs=210.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.++||+|+||+||+++++.+++.||+|++.+.. .....+.+|+.++..+.|+++ +.+++.+.+.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWI-----TTLHYAFQDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecCCE
Confidence 46999999999999999999999999999999996422 223446778888888777666 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ +++|.+++.+.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--------------- 139 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--------------- 139 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC---------------
Confidence 99999999 999999998743 3689999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++...... .....||+.|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 140 ------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~P 207 (332)
T cd05623 140 ------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETP 207 (332)
T ss_pred ------------CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCC
Confidence 5677777776543211 12347999999999986 34688999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhC--CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 318 FQTHENLEHLAMMERVLG--PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
|.+.+..+.+..+..... .+|.. ...++..+++++.+||..+ ..+..|+++.++++|+||.++++.
T Consensus 208 f~~~~~~~~~~~i~~~~~~~~~p~~-~~~~s~~~~~li~~ll~~~--~~r~~r~~~~~~~~h~~f~~~~~~ 275 (332)
T cd05623 208 FYAESLVETYGKIMNHKERFQFPAQ-VTDVSEDAKDLIRRLICSR--EHRLGQNGIEDFKQHPFFTGIDWD 275 (332)
T ss_pred CCCCCHHHHHHHHhCCCccccCCCc-cccCCHHHHHHHHHHccCh--hhhcCCCCHHHHhCCCCcCCCCHH
Confidence 998877777666654322 22322 2356788999999998654 224457899999999999988754
No 109
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.5e-44 Score=337.36 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=213.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.|++.+.||+|+||+||+|.+..+++.||+|++.... .....+.+|+.++++++|+++ +.+.+.+..++..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFV-----VNLAYAYETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCc-----eeEEEEEecCCEE
Confidence 3788899999999999999999999999999986432 223456789999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~---------------- 139 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG---------------- 139 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC----------------
Confidence 9999999 89999888765545799999999999999999999999999999999999997655
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....|+..|+|||++.+..++.++|||||||++|+|++|..||.+.....
T Consensus 140 -----------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 140 -----------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred -----------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5788888877543322 123578999999999998899999999999999999999999998776655
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccccC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~~ 387 (411)
....+..........+....+..+.+++.+|++.+ |.+|++ +.++++|+||.+..+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~~~~~~~~~~l~~~~~~~~~~~~~ 271 (285)
T cd05632 209 KREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKD----PKQRLGCQEEGAGEVKRHPFFRNMNFKR 271 (285)
T ss_pred HHHHHHHhhhccccccCccCCHHHHHHHHHHccCC----HhHcCCCcccChHHHHcChhhhcCCHHH
Confidence 44444433333233334456778899999999999 777777 89999999999876543
No 110
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.6e-45 Score=349.50 Aligned_cols=247 Identities=26% Similarity=0.395 Sum_probs=209.0
Q ss_pred eeeccccceEEEEEEe---CCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 98 SKMGEGTFGQVVECFD---NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~---~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
+.||+|+||.||++++ ..+|+.||+|+++... .......+|+.++++++|+|| +++++++..++.+|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI-----VKLHYAFQTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcCCEEEEE
Confidence 6799999999999986 3578999999997533 233456779999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~------------------- 135 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG------------------- 135 (318)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC-------------------
Confidence 9999 899999997754 699999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~ 327 (411)
.++|+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+..
T Consensus 136 --------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~ 207 (318)
T cd05582 136 --------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETM 207 (318)
T ss_pred --------cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHH
Confidence 5778888877654322 23357899999999999888999999999999999999999999988877777
Q ss_pred HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCccccc
Q 015222 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 328 ~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~ 386 (411)
..+.+....+|. .++..+.++|.+||+.| |.+|++ +.++++|+||..+.+.
T Consensus 208 ~~i~~~~~~~p~----~~~~~~~~li~~~l~~~----P~~R~~a~~~~~~~~~~~~~~~~~~~~ 263 (318)
T cd05582 208 TMILKAKLGMPQ----FLSPEAQSLLRALFKRN----PANRLGAGPDGVEEIKRHPFFSTIDWN 263 (318)
T ss_pred HHHHcCCCCCCC----CCCHHHHHHHHHHhhcC----HhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence 766655544443 35677899999999999 888887 8889999999987543
No 111
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=351.22 Aligned_cols=262 Identities=26% Similarity=0.369 Sum_probs=229.6
Q ss_pred CCeEE--EeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i--~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.-|+| .+.||+|.||+||-|.++.+|+.||||++.+.. +....+.+|+.||+.+.||+| |.+.-.|+..+
T Consensus 562 tvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGi-----V~le~M~ET~e 636 (888)
T KOG4236|consen 562 TVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGI-----VNLECMFETPE 636 (888)
T ss_pred HHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCe-----eEEEEeecCCc
Confidence 34665 378999999999999999999999999997532 455778899999999999988 99999999999
Q ss_pred eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.+++|||.+.|+..+.+......+|++...+.++.||+.||.|||-++|+|+||||+|||+.+.
T Consensus 637 rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~---------------- 700 (888)
T KOG4236|consen 637 RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA---------------- 700 (888)
T ss_pred eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC----------------
Confidence 9999999997787777766666789999999999999999999999999999999999999764
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
+...++||||||+|+++.+. ....+||+.|+|||++.++.|+..-|+||.|||+|.-++|..||...++
T Consensus 701 --------~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd- 771 (888)
T KOG4236|consen 701 --------SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED- 771 (888)
T ss_pred --------CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-
Confidence 35568999999999998755 3567999999999999999999999999999999999999999975443
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
+-..|++..--.|...|..++.++.++|..+|+.. -.+|.++...+.|+|+++-..|..
T Consensus 772 -IndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVk----m~kRysvdk~lsh~Wlq~yq~w~D 830 (888)
T KOG4236|consen 772 -INDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVK----MRKRYSVDKSLSHPWLQDYQTWLD 830 (888)
T ss_pred -hhHHhhccccccCCCchhhcCHHHHHHHHHHHHHH----HHHhcchHhhccchhhhcchHHHH
Confidence 44555555556777888999999999999999999 889999999999999998776654
No 112
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-44 Score=349.35 Aligned_cols=250 Identities=24% Similarity=0.404 Sum_probs=199.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
.+|++++.||+|+||.||+|++..+++.||+|+.... ....|+.++++++|+|| +++++++...+..++|
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv 135 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSV-----IRMKDTLVSGAITCMV 135 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCC-----cChhheEEeCCeeEEE
Confidence 4799999999999999999999999999999986432 23468999999988877 9999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 172 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||++.++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~-------------------- 194 (357)
T PHA03209 136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD-------------------- 194 (357)
T ss_pred EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------
Confidence 9999889999987654 4699999999999999999999999999999999999997766
Q ss_pred ccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhC-CCCCCCCCh-----
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG-EALFQTHEN----- 323 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg-~~pf~~~~~----- 323 (411)
.++|+|||++...... .....||..|+|||++.+..++.++|||||||++|||+++ ..+|.....
T Consensus 195 -------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~ 267 (357)
T PHA03209 195 -------QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEY 267 (357)
T ss_pred -------CEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHH
Confidence 5778888877643222 2335789999999999999999999999999999999985 444543211
Q ss_pred ----HHHHHHHHHHhCCCChhHH------------------------------HhhhhhhhhhhccCCccCCCCCCCcHH
Q 015222 324 ----LEHLAMMERVLGPLPHHMV------------------------------IRADRRAEKYFRRGARLDWPDGATSRD 369 (411)
Q Consensus 324 ----~~~~~~i~~~~~~~p~~~~------------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~ 369 (411)
...+..+....+..|..+. ...+..+.++|.+||+.| |.+||
T Consensus 268 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d----P~~Rp 343 (357)
T PHA03209 268 VKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFD----AAMRP 343 (357)
T ss_pred HHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCC----cccCc
Confidence 1122222222222221111 123456677999999999 99999
Q ss_pred HHHHHHhcCCCCcc
Q 015222 370 SMRAVWKLLRLPVI 383 (411)
Q Consensus 370 t~~~il~~~~~~~~ 383 (411)
|+.|+++||||+++
T Consensus 344 ta~e~l~hp~f~~~ 357 (357)
T PHA03209 344 SAEEILNYPMFAQL 357 (357)
T ss_pred CHHHHhcCchhccC
Confidence 99999999999874
No 113
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-44 Score=345.64 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=208.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.++|++.++||+|+||.||+|.+..++..||+|++... ......+.+|+++++.+.|+|| +++++++..++++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcc-----cceeEEEEECCEE
Confidence 47899999999999999999999999999999998743 2344668899999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
++||||+ +++|.+++.... .+++..+..++.||+.||.|||+. +|+|+||||+|||++.+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--------------- 141 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--------------- 141 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC---------------
Confidence 9999999 999999998765 689999999999999999999985 799999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||++...... .....||..|+|||++.+..++.++|||||||++|+|++|+.||...+..+
T Consensus 142 ------------~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~ 209 (333)
T cd06650 142 ------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE 209 (333)
T ss_pred ------------CEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH
Confidence 5778888877643222 234578999999999998889999999999999999999999997654433
Q ss_pred HHHHHH-----------------------------------------HHhC-CCChhHHHhhhhhhhhhhccCCccCCCC
Q 015222 326 HLAMME-----------------------------------------RVLG-PLPHHMVIRADRRAEKYFRRGARLDWPD 363 (411)
Q Consensus 326 ~~~~i~-----------------------------------------~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~ 363 (411)
....+. .... ..+.......+.++.+++.+||+.|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~--- 286 (333)
T cd06650 210 LELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKN--- 286 (333)
T ss_pred HHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCC---
Confidence 221110 0000 0000001124567889999999999
Q ss_pred CCCcHHHHHHHHhcCCCCccc
Q 015222 364 GATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 364 rp~~R~t~~~il~~~~~~~~~ 384 (411)
|++||++.++++|+||+...
T Consensus 287 -P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 287 -PAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred -cccCcCHHHHhhCHHHhcCc
Confidence 99999999999999998754
No 114
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=9e-45 Score=347.04 Aligned_cols=248 Identities=20% Similarity=0.305 Sum_probs=200.3
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||+||+|++..+++.||+|++++.. ...+.+.+|+.++.++. |++ ++.+++++...+.+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPF-----LVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCC-----EeeEEEEEEeCCEEEEEE
Confidence 47999999999999999999999999997532 23445678888888884 554 499999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~-------------------- 133 (327)
T cd05617 76 EYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG-------------------- 133 (327)
T ss_pred eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--------------------
Confidence 999 999999887664 699999999999999999999999999999999999998776
Q ss_pred ccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC------
Q 015222 252 KNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE------ 322 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~------ 322 (411)
.+||+|||++.... ......+||+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus 134 -------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~ 206 (327)
T cd05617 134 -------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN 206 (327)
T ss_pred -------CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc
Confidence 56777777765421 12234579999999999999999999999999999999999999996422
Q ss_pred hHH-HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH------HHHHHhcCCCCcccccC
Q 015222 323 NLE-HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS------MRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 323 ~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t------~~~il~~~~~~~~~~~~ 387 (411)
..+ ....+......+ ....+..+.+++.+||+.| |.+|++ +.++++|+||..+++..
T Consensus 207 ~~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~d----P~~R~~~~~~~~~~~i~~h~~f~~~~~~~ 270 (327)
T cd05617 207 TEDYLFQVILEKPIRI----PRFLSVKASHVLKGFLNKD----PKERLGCQPQTGFSDIKSHTFFRSIDWDL 270 (327)
T ss_pred cHHHHHHHHHhCCCCC----CCCCCHHHHHHHHHHhccC----HHHcCCCCCCCCHHHHHcCCCCCCCCHHH
Confidence 112 222222222223 3346678899999999999 666665 68999999999887543
No 115
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.5e-44 Score=340.07 Aligned_cols=251 Identities=24% Similarity=0.434 Sum_probs=195.4
Q ss_pred EeeeccccceEEEEEEeC--CCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCeEEEEE
Q 015222 97 LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVF 172 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~ 172 (411)
.++||+|+||+||+|+++ .+++.||+|.+.... ......+|+.++++++|+|+ +++++++.. +..+|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNV-----ISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCC-----cceeeeEecCCCcEEEEEE
Confidence 358999999999999975 467899999987543 23457789999999998887 999988854 46789999
Q ss_pred ccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 173 EKLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 173 e~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
||++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+..++
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~-------------- 145 (317)
T cd07868 80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG-------------- 145 (317)
T ss_pred eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC--------------
Confidence 999889999886431 12589999999999999999999999999999999999995432
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf 318 (411)
+.+..+||+|||++...... .....||+.|+|||++.+. .++.++|||||||++|||++|++||
T Consensus 146 ---------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f 216 (317)
T cd07868 146 ---------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ---------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCc
Confidence 13347899999988764332 1235789999999999875 6899999999999999999999999
Q ss_pred CCCCh---------HHHHHHHHHHhCCCChhHHH----------------------------------hhhhhhhhhhcc
Q 015222 319 QTHEN---------LEHLAMMERVLGPLPHHMVI----------------------------------RADRRAEKYFRR 355 (411)
Q Consensus 319 ~~~~~---------~~~~~~i~~~~~~~p~~~~~----------------------------------~~~~~~~~li~~ 355 (411)
.+... .+.+..+....+..+...+. ..+..+.++|.+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~ 296 (317)
T cd07868 217 HCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQK 296 (317)
T ss_pred cCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHH
Confidence 75432 22333333333222111111 113457789999
Q ss_pred CCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 356 GARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 356 ~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
||..| |.+|+|++|+++||||
T Consensus 297 mL~~d----P~~R~t~~e~l~hp~f 317 (317)
T cd07868 297 LLTMD----PIKRITSEQAMQDPYF 317 (317)
T ss_pred HhccC----cccCCCHHHHhcCCCC
Confidence 99999 9999999999999997
No 116
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-44 Score=348.13 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=205.8
Q ss_pred CCccCCCeEEEeeeccccceEEEEEEeC--CCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 87 GENLTPRYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 87 ~~~~~~~y~i~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
...+..+|++++.||+|+||.||+|... .+++.||+|.+... ....+|+.++++++|++| +++++++..
T Consensus 87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~i-----v~~~~~~~~ 157 (392)
T PHA03207 87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAI-----INLIHAYRW 157 (392)
T ss_pred chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCc-----cceeeeEee
Confidence 3345678999999999999999999764 45678999998643 234679999999998887 999999999
Q ss_pred CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 165 ~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.+..|+|||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 158 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~------------- 222 (392)
T PHA03207 158 KSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE------------- 222 (392)
T ss_pred CCEEEEEehhcCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC-------------
Confidence 99999999999889999996544 799999999999999999999999999999999999998776
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.++|+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 223 --------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 223 --------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred --------------CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 56677777665432221 23579999999999999899999999999999999999999997
Q ss_pred CCCh---HHHHHHHHHHhCCCChhHH------------------------------HhhhhhhhhhhccCCccCCCCCCC
Q 015222 320 THEN---LEHLAMMERVLGPLPHHMV------------------------------IRADRRAEKYFRRGARLDWPDGAT 366 (411)
Q Consensus 320 ~~~~---~~~~~~i~~~~~~~p~~~~------------------------------~~~~~~~~~li~~~l~~~~~~rp~ 366 (411)
+... ...+..+.+..+..+..+. ...+..+.++|.+||..+ |.
T Consensus 289 ~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d----p~ 364 (392)
T PHA03207 289 GKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFD----QE 364 (392)
T ss_pred CCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccC----hh
Confidence 6532 2333333333222111100 123456788999999999 99
Q ss_pred cHHHHHHHHhcCCCCcccc
Q 015222 367 SRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 367 ~R~t~~~il~~~~~~~~~~ 385 (411)
+||++.+++.||||....+
T Consensus 365 ~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 365 FRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred hCCCHHHHhhCchhhccch
Confidence 9999999999999987554
No 117
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.6e-44 Score=334.21 Aligned_cols=256 Identities=21% Similarity=0.333 Sum_probs=201.5
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||+|+||.||+++++.+|+.||+|.+.... ........|++++++++|+++ ++++++++.+.+.|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFI-----VNLAYAFESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcE-----EEEEEEEecCCeEEEEEecC
Confidence 799999999999999999999999986422 123345669999999988776 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.......+++..+..++.||+.||+|||+.||+||||||+||+++.++
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~----------------------- 132 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG----------------------- 132 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC-----------------------
Confidence 99999988766555689999999999999999999999999999999999997766
Q ss_pred CCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH-LAMME 331 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~-~~~i~ 331 (411)
.++|+|||++....... ....||..|+|||++.+..++.++|||||||++|||++|+.||........ .....
T Consensus 133 ----~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05607 133 ----NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKR 208 (277)
T ss_pred ----CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHH
Confidence 56777777765543222 234689999999999998999999999999999999999999976533211 11111
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
.............++..+.+++.+||+.+|.+||+.+..+++++.|+||+.+++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~ 264 (277)
T cd05607 209 RTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264 (277)
T ss_pred HhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHH
Confidence 21111111112356788999999999999554444444448899999999887543
No 118
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-45 Score=323.50 Aligned_cols=266 Identities=24% Similarity=0.358 Sum_probs=227.7
Q ss_pred CCeEEE-eeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~-~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+-|++. +.||+|+|+.|--+....++..+|||++.+.. ..+..+.+|++++.+.. +|+||++++++|+++..+|
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq----gh~nilqLiefFEdd~~FY 152 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ----GHKNILQLIEFFEDDTRFY 152 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc----CCccHHHHHHHhcccceEE
Confidence 345553 57899999999999999999999999997654 45677889999998875 4466699999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
||||.+ ||+|...|+++. .+++.++.++.++|+.||.|||.+||.||||||+|||-.+.+
T Consensus 153 LVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn----------------- 213 (463)
T KOG0607|consen 153 LVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN----------------- 213 (463)
T ss_pred EEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC-----------------
Confidence 999999 999999999876 699999999999999999999999999999999999987654
Q ss_pred CccccCCCCCCeeEeecCCcccccC----------CCcccccCCCccccceec---CC--CCCccchhHHHHHHHHHHHh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQ----------DHSYVVSTRHYRAPEVIL---GL--GWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~---~~--~~~~~~DiwSlGvil~ellt 313 (411)
.-.-+|||||.+..-... ...+.+|+..|||||+.. +. .|+.+.|.||||||||-||+
T Consensus 214 -------~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLs 286 (463)
T KOG0607|consen 214 -------KVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLS 286 (463)
T ss_pred -------CcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHh
Confidence 223688888877653221 123468999999999864 32 58999999999999999999
Q ss_pred CCCCCCCCC---------------hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 314 GEALFQTHE---------------NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 314 g~~pf~~~~---------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
|.+||.+.- ....++.|+.+...+|+.-|..++.++++++..+|..+ +..|.++.++++||
T Consensus 287 GYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrd----a~~rlsa~~vlnhP 362 (463)
T KOG0607|consen 287 GYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRD----AKQRLSAAQVLNHP 362 (463)
T ss_pred CCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhcc----HHhhhhhhhccCCc
Confidence 999998652 24567888999999999999999999999999999999 99999999999999
Q ss_pred CCCcccccCCCCC
Q 015222 379 RLPVIDLYSASPN 391 (411)
Q Consensus 379 ~~~~~~~~~~~~~ 391 (411)
|++.+....+.|.
T Consensus 363 w~~~~~~ekalpt 375 (463)
T KOG0607|consen 363 WVQRCAPEKALPT 375 (463)
T ss_pred cccccchhccCCC
Confidence 9998887755444
No 119
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-47 Score=334.52 Aligned_cols=255 Identities=22% Similarity=0.365 Sum_probs=217.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
-|.++++||+|+||.||+|.++++|+.||||.+.. ....+++.+|+.|+++...+.+ |++|+.|-....++|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yV-----VKYYGSYFK~sDLWIVM 107 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYV-----VKYYGSYFKHSDLWIVM 107 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchh-----hhhhhhhccCCceEeeh
Confidence 48899999999999999999999999999999854 3456778999999999988776 99999988888999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||| .|++.|.++.+. ..|++.++..+++..+.||+|||...-||||||..|||++-+|
T Consensus 108 EYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G-------------------- 166 (502)
T KOG0574|consen 108 EYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG-------------------- 166 (502)
T ss_pred hhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--------------------
Confidence 999 899999998655 5799999999999999999999999999999999999998887
Q ss_pred ccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
..||+|||.|...... .++..||+.|||||++..-.|+.++||||||++..||..|++||.+-.....+.
T Consensus 167 -------~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF 239 (502)
T KOG0574|consen 167 -------IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF 239 (502)
T ss_pred -------hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE
Confidence 5677777777654433 356789999999999999999999999999999999999999998766654443
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.|-. .++....-...+++++.+|++.||.+. |++|.|+.++++|+|+++....
T Consensus 240 MIPT-~PPPTF~KPE~WS~~F~DFi~~CLiK~----PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 240 MIPT-KPPPTFKKPEEWSSEFNDFIRSCLIKK----PEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred eccC-CCCCCCCChHhhhhHHHHHHHHHhcCC----HHHHHHHHHHhhhhhhcCCCcc
Confidence 3322 112222334567889999999999999 9999999999999999986543
No 120
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.1e-43 Score=333.73 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=218.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++++.|+|+ +++++++..++.
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFL-----VNLYGSFQDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCe
Confidence 46999999999999999999999999999999986432 344667889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.++||||+ +++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+|||++.++
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--------------- 138 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--------------- 138 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC---------------
Confidence 99999999 999999998765 799999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...........|++.|+|||.+.+...+.++||||||+++|+|++|+.||...+..+.
T Consensus 139 ------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 206 (290)
T cd05580 139 ------------YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI 206 (290)
T ss_pred ------------CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 57888888777655555556789999999999888899999999999999999999999988776555
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccCC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~~ 388 (411)
...+......+|. ..+..+.++|.+||..+ |.+|+ +++++++|+||..+.+...
T Consensus 207 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~----p~~R~~~~~~~~~~l~~~~~~~~~~~~~~ 265 (290)
T cd05580 207 YEKILEGKVRFPS----FFSPDAKDLIRNLLQVD----LTKRLGNLKNGVNDIKNHPWFAGIDWIAL 265 (290)
T ss_pred HHHHhcCCccCCc----cCCHHHHHHHHHHccCC----HHHccCcccCCHHHHHcCcccccCCHHHH
Confidence 5555544434443 34678899999999999 66666 9999999999998875443
No 121
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.6e-43 Score=341.97 Aligned_cols=262 Identities=27% Similarity=0.457 Sum_probs=214.0
Q ss_pred ceEEeeCC---ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcc
Q 015222 81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR 154 (411)
Q Consensus 81 ~~~~~~~~---~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~ 154 (411)
++++.+|+ .+.++|++.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.++++++|+|+
T Consensus 2 ~~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i---- 77 (353)
T cd07850 2 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI---- 77 (353)
T ss_pred ceeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCC----
Confidence 45666766 4578999999999999999999999999999999998642 2334556789999999988887
Q ss_pred eEEEeeeeecC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 015222 155 CVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228 (411)
Q Consensus 155 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~ 228 (411)
+++++++... .+.|+||||+.++|.+.+... +++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 78 -v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~ 152 (353)
T cd07850 78 -IGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 152 (353)
T ss_pred -cceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 8888887543 367999999988999988652 88999999999999999999999999999999999998
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHH
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
.++ .++|+|||++....... ....++..|+|||++.+..++.++|||||||
T Consensus 153 ~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 205 (353)
T cd07850 153 SDC---------------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 205 (353)
T ss_pred CCC---------------------------CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHH
Confidence 766 56777777766543322 2346788999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHH---------------------------------------hhhh
Q 015222 307 ILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVI---------------------------------------RADR 347 (411)
Q Consensus 307 il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~---------------------------------------~~~~ 347 (411)
++|+|++|+.||...+.......+....+..+..+.. ..++
T Consensus 206 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (353)
T cd07850 206 IMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKAS 285 (353)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchh
Confidence 9999999999999887766666655544443332211 1244
Q ss_pred hhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 348 RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 348 ~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.+.++|.+||..| |++||++.++|+|+||..
T Consensus 286 ~~~~li~~~L~~d----P~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 286 QARDLLSKMLVID----PEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHHHHHHcCCC----hhhCcCHHHHhcChhHhh
Confidence 5789999999999 999999999999998874
No 122
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.9e-44 Score=331.47 Aligned_cols=249 Identities=32% Similarity=0.519 Sum_probs=205.8
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHH---HHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~---~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
|++.+.||+|+||+||++.+..+++.||+|++......... ..+|+.+++++.|+++ +++++++.+.+..++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-----VQILDVFQDDNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-----CHEEEEEEESSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccc-----ccccccccccccccc
Confidence 89999999999999999999999999999999865533332 3459999999988887 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
|||++ +++|.+++.... .+++..+..++.||+.||++||++||+|+||||+||+++.++
T Consensus 76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~------------------ 135 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG------------------ 135 (260)
T ss_dssp EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS------------------
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc------------------
Confidence 99999 669999998544 699999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceec-CCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+... ........+|..|+|||++. +..++.++||||||+++|+|++|..||......+
T Consensus 136 ---------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~ 206 (260)
T PF00069_consen 136 ---------EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDD 206 (260)
T ss_dssp ---------EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHH
T ss_pred ---------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 5677777777542 22223457899999999998 7789999999999999999999999999875444
Q ss_pred HHHHHHHHhCCCChhHH---HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMV---IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~---~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.+.......... ......+.+++.+||..+ |++||++.++++||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 207 QLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKD----PEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSS----GGGSTTHHHHHTSGGG
T ss_pred hhhhhhhcccccccccccccchhHHHHHHHHHHHccCC----hhHCcCHHHHhcCCCC
Confidence 44444443322111111 112378999999999999 9999999999999997
No 123
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-43 Score=330.63 Aligned_cols=252 Identities=29% Similarity=0.459 Sum_probs=203.4
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|++|.||+|++..+++.||+|+++... .....+.+|+.+++++.|+++ +++++++..++..|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI-----VCLQDVLMQESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCE-----eeeEEEEeeCCeEE
Confidence 4899999999999999999999999999999986432 234567889999999987776 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+.++|.+++.... ...+++..++.++.||+.||+|||++||+|+||||+||+++.+|
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~----------------- 138 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG----------------- 138 (285)
T ss_pred EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC-----------------
Confidence 999999779999887543 24689999999999999999999999999999999999998877
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++....... ....+++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..
T Consensus 139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~ 208 (285)
T cd07861 139 ----------VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI 208 (285)
T ss_pred ----------cEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 45666666554332111 223568899999998765 5789999999999999999999999887665
Q ss_pred HHHHHHHHHhCCCChh-------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 325 EHLAMMERVLGPLPHH-------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~-------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
+....+.+..+..... ....++.++.++|.+||..| |.+|||+.++++|+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----P~~Rpt~~~ll~~~~ 284 (285)
T cd07861 209 DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYD----PAKRISAKKALNHPY 284 (285)
T ss_pred HHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCC----hhhCCCHHHHhcCCC
Confidence 5444433332221111 11235677889999999999 999999999999999
Q ss_pred C
Q 015222 380 L 380 (411)
Q Consensus 380 ~ 380 (411)
|
T Consensus 285 ~ 285 (285)
T cd07861 285 F 285 (285)
T ss_pred C
Confidence 7
No 124
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-46 Score=329.49 Aligned_cols=262 Identities=23% Similarity=0.386 Sum_probs=224.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
-++|..++.||+|.||.|.+++.+.+++.+|+|++++.- ........|-.+|+..+||.+ ..+.-.|+..+
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFL-----t~LKYsFQt~d 241 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFL-----TSLKYSFQTQD 241 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHH-----HHhhhhhccCc
Confidence 357889999999999999999999999999999998643 223344568889999888876 77777888999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
++|+||||. ||.|.-.|.+.. .+++..++.+...|+.||.|||+++||.||||.+|+|++.+|
T Consensus 242 rlCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG-------------- 305 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG-------------- 305 (516)
T ss_pred eEEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--------------
Confidence 999999999 999998888765 799999999999999999999999999999999999998888
Q ss_pred CCCCccccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
++||+|||+++.. .....+++|||.|+|||++....|+.++|+|.+||++|||++|+.||...+
T Consensus 306 -------------HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d 372 (516)
T KOG0690|consen 306 -------------HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD 372 (516)
T ss_pred -------------ceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc
Confidence 5566666666532 234567899999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH-----HHHHHHHhcCCCCcccccCCCCCchh
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR-----DSMRAVWKLLRLPVIDLYSASPNCLC 394 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R-----~t~~~il~~~~~~~~~~~~~~~~~~~ 394 (411)
.....+.|......+|.. ++++++.++..+|.+| |.+| ..++||.+|.||..++|.....+-+.
T Consensus 373 h~kLFeLIl~ed~kFPr~----ls~eAktLLsGLL~kd----P~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~ 441 (516)
T KOG0690|consen 373 HEKLFELILMEDLKFPRT----LSPEAKTLLSGLLKKD----PKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIE 441 (516)
T ss_pred hhHHHHHHHhhhccCCcc----CCHHHHHHHHHHhhcC----hHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccC
Confidence 888888887777777765 5778999999999999 6665 46899999999999999877555444
No 125
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.5e-43 Score=336.86 Aligned_cols=289 Identities=19% Similarity=0.286 Sum_probs=220.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+..|+.+++.+.|+++ +++++.+.+++.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL-----PTLYASFQTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc-----hhheeeeecCCE
Confidence 47999999999999999999999999999999997533 234567889999999988777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.|+||||+ +++|.+++.+.....+++..+..++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 99999999 89999999876555799999999999999999999999999999999999999999888888887654433
Q ss_pred CCCccccCCCCCC-----eeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 247 DGSYFKNLPKSSA-----IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~-----~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
............. .+...=..............||..|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 2211100000000 00000000000111122357899999999999888999999999999999999999999887
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
+....+..+.......+.. ...+..+.+++.+|+..++.+||+.+-+++++++|+||.+.++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~ 299 (316)
T cd05574 236 NRDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWAL 299 (316)
T ss_pred chHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhh
Confidence 7766665554433333322 226788999999999999444444444499999999999877544
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.5e-44 Score=356.81 Aligned_cols=254 Identities=22% Similarity=0.232 Sum_probs=208.2
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
..++|++.+.||+|+||+||+|++..+++.||||++... ......+.+|+.++..+.|+++ +++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~i-----v~~~~~~~~~~ 104 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSI-----VKCHEDFAKKD 104 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcE-----EEeecceeccc
Confidence 346999999999999999999999999999999998643 2334567789988888877766 88777664321
Q ss_pred --------eEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccccc
Q 015222 167 --------HICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235 (411)
Q Consensus 167 --------~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l 235 (411)
.+++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~---- 180 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNG---- 180 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCC----
Confidence 478999999 999999987532 34689999999999999999999999999999999999998766
Q ss_pred CCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHH
Q 015222 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVE 310 (411)
Q Consensus 236 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 310 (411)
.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++||
T Consensus 181 -----------------------~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilye 237 (496)
T PTZ00283 181 -----------------------LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYE 237 (496)
T ss_pred -----------------------CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 5778888877643221 234579999999999999999999999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
|++|+.||.+.+..+.+..+...... .+...++..+.+++.+||..+ |.+||++.++++|+|++.
T Consensus 238 LltG~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~L~~d----P~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 238 LLTLKRPFDGENMEEVMHKTLAGRYD---PLPPSISPEMQEIVTALLSSD----PKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHCCCCCCCCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccC----hhhCcCHHHHHhCHHHHH
Confidence 99999999987776665554432221 122346778999999999888 999999999999999775
No 127
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.6e-43 Score=331.34 Aligned_cols=251 Identities=27% Similarity=0.442 Sum_probs=202.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||+|++..+|+.||+|.++... .....+.+|+.++++++|+|+ +++++++.+.+..+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLYDVLHSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCe-----eeHHHHhccCCceE
Confidence 5899999999999999999999999999999986432 223456789999999988877 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+|+||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~------------------ 136 (284)
T cd07839 76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG------------------ 136 (284)
T ss_pred EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC------------------
Confidence 999999889999887643 3699999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC-CCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF-QTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf-~~~~~~ 324 (411)
.++|+|||++...... .....++..|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..
T Consensus 137 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~ 207 (284)
T cd07839 137 ---------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 207 (284)
T ss_pred ---------cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence 4566666665543221 1223578899999998775 4789999999999999999988875 555555
Q ss_pred HHHHHHHHHhCCCChh-------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 325 EHLAMMERVLGPLPHH-------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~-------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
+.+..+.+..+..+.. ....++..+.++|.+||+.+ |.+|||+.++++|+|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~t~~~il~h~~ 283 (284)
T cd07839 208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCN----PVQRISAEEALQHPY 283 (284)
T ss_pred HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCC----hhhcCCHHHHhcCCC
Confidence 5555554433322211 11235678889999999999 999999999999999
Q ss_pred C
Q 015222 380 L 380 (411)
Q Consensus 380 ~ 380 (411)
|
T Consensus 284 f 284 (284)
T cd07839 284 F 284 (284)
T ss_pred C
Confidence 7
No 128
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-44 Score=357.66 Aligned_cols=265 Identities=22% Similarity=0.322 Sum_probs=197.9
Q ss_pred EeeCCccCCCeEEEeeeccccceEEEEEEeCCCC-cEEEEE------------------EeccchhhhHHHHHHHHHHHH
Q 015222 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIK------------------IVRSINKYREAAMIEIDVLQR 144 (411)
Q Consensus 84 ~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~-~~vavK------------------~~~~~~~~~~~~~~E~~~l~~ 144 (411)
...++.+.++|+++++||+|+||+||+|..+... ..+++| .+.........+.+|+.++++
T Consensus 140 ~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~ 219 (501)
T PHA03210 140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR 219 (501)
T ss_pred cccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence 3445567789999999999999999998764322 222222 222222344567889999999
Q ss_pred HhcCCCCCcceEEEeeeeecCCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 015222 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221 (411)
Q Consensus 145 l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dik 221 (411)
++|+|| +++++++.+.+..|+||++++++|.+++.... ........++.++.||+.||+|||++||||||||
T Consensus 220 l~HpnI-----v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK 294 (501)
T PHA03210 220 LNHENI-----LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK 294 (501)
T ss_pred CCCCCc-----CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 998887 99999999999999999999889998876532 1123466788999999999999999999999999
Q ss_pred CCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCc
Q 015222 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNY 297 (411)
Q Consensus 222 p~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~ 297 (411)
|+|||++.+| .+||+|||++....... ....||..|+|||++.+..++.
T Consensus 295 P~NILl~~~~---------------------------~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 347 (501)
T PHA03210 295 LENIFLNCDG---------------------------KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCE 347 (501)
T ss_pred HHHEEECCCC---------------------------CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCc
Confidence 9999997766 57888888876543321 2357999999999999999999
Q ss_pred cchhHHHHHHHHHHHhCCCC-CCCC--ChHHHHHHHHHHhC----CCCh-----------------------hH-HHhhh
Q 015222 298 PCDLWSVGCILVELCSGEAL-FQTH--ENLEHLAMMERVLG----PLPH-----------------------HM-VIRAD 346 (411)
Q Consensus 298 ~~DiwSlGvil~elltg~~p-f~~~--~~~~~~~~i~~~~~----~~p~-----------------------~~-~~~~~ 346 (411)
++|||||||++|||++|..+ |... .....+..+..... .+|. .+ ....+
T Consensus 348 ~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 427 (501)
T PHA03210 348 ITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLP 427 (501)
T ss_pred HHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCC
Confidence 99999999999999998754 4332 22222222222111 1111 00 01234
Q ss_pred hhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 347 RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 347 ~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
..+.++|.+||..| |.+||++.|+++||||....
T Consensus 428 ~~~~~li~kmL~~D----P~~Rpsa~elL~hp~f~~~~ 461 (501)
T PHA03210 428 ADFEYPLVKMLTFD----WHLRPGAAELLALPLFSAEE 461 (501)
T ss_pred hHHHHHHHHHhccC----cccCcCHHHHhhChhhhcCC
Confidence 45677899999999 99999999999999998765
No 129
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-43 Score=354.17 Aligned_cols=252 Identities=21% Similarity=0.206 Sum_probs=210.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC-CcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..|.+.+.||+|+||.||+|.+..+ ++.||+|.+.... .....+.+|+.+++.+.|+|| +++++++..++++|
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpni-----v~~~~~~~~~~~~~ 141 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGI-----VKHFDDFKSDDKLL 141 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEEECCEEE
Confidence 4599999999999999999998887 7889999875433 334556789999999988887 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+||||+ +++|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--------------- 206 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--------------- 206 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC---------------
Confidence 999999 99999988642 223689999999999999999999999999999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.+||+|||++...... ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 207 ------------~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~ 274 (478)
T PTZ00267 207 ------------IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274 (478)
T ss_pred ------------cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 5677777777654322 23356999999999999989999999999999999999999999887
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
+..+.+..+...... .....++..+.++|.+||..+ |..||++.+++.|+|+..
T Consensus 275 ~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~d----P~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 275 SQREIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKN----PALRPTTQQLLHTEFLKY 328 (478)
T ss_pred CHHHHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccC----hhhCcCHHHHHhCHHHHH
Confidence 776666655543221 112345678999999999988 999999999999998864
No 130
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=351.87 Aligned_cols=257 Identities=23% Similarity=0.395 Sum_probs=221.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEec-cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
+.|.|+..||.|+||.||+|..+.++-..|-|++. +.....+++.-|++||..+.||+| +++++.|..++.++|
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~i-----vkLl~ayy~enkLwi 106 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVI-----VKLLSAYYFENKLWI 106 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHH-----HHHHHHHhccCceEE
Confidence 46899999999999999999999999989999986 455667889999999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
..||| ||-+...+..-+ +.|.+.++..+++|++.||.|||+++|||||||..|||++-+|
T Consensus 107 liEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG------------------ 167 (1187)
T KOG0579|consen 107 LIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG------------------ 167 (1187)
T ss_pred EEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC------------------
Confidence 99999 777777776554 5799999999999999999999999999999999999999888
Q ss_pred ccccCCCCCCeeEeecCCccccc---CCCcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEH---QDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+.... .....++|||+|||||+.. ..+|+.++||||||++|.||..+.+|....
T Consensus 168 ---------dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel 238 (1187)
T KOG0579|consen 168 ---------DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL 238 (1187)
T ss_pred ---------cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence 67888888765432 3345689999999999875 457999999999999999999999999988
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
+....+.+|.+..++- .-.+..++..+.||+.+||.++ |..||++.++++|||+.++.-.
T Consensus 239 npMRVllKiaKSePPT-LlqPS~Ws~~F~DfLk~cL~Kn----p~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 239 NPMRVLLKIAKSEPPT-LLQPSHWSRSFSDFLKRCLVKN----PRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred chHHHHHHHhhcCCCc-ccCcchhhhHHHHHHHHHHhcC----CccCCCHHHHhhCcccccCCcc
Confidence 8888887777654321 1223456788999999999999 9999999999999999987654
No 131
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.4e-43 Score=338.80 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=193.9
Q ss_pred CCCeEEEeeeccccceEEEEEEe-----CCCCcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~ 162 (411)
.++|++.++||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.+++.+ .|+|| +++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~ 80 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNV-----VNLLGAC 80 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcce-----eeEEeEe
Confidence 36899999999999999999975 2445789999997432 3345688999999999 67766 9999987
Q ss_pred ecC-CeEEEEEccC-CCCHHHHHHhcC-----------------------------------------------------
Q 015222 163 DYR-NHICIVFEKL-GPSLYDFLRKNS----------------------------------------------------- 187 (411)
Q Consensus 163 ~~~-~~~~lv~e~~-~~~L~~~l~~~~----------------------------------------------------- 187 (411)
... +.+++||||+ +|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 654 5689999999 999999997532
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCe
Q 015222 188 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260 (411)
Q Consensus 188 -------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 260 (411)
...+++..+..++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~---------------------------~~ 213 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN---------------------------VV 213 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC---------------------------cE
Confidence 12478889999999999999999999999999999999998766 56
Q ss_pred eEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHh
Q 015222 261 KLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVL 334 (411)
Q Consensus 261 kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~ 334 (411)
||+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+......
T Consensus 214 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~- 292 (338)
T cd05102 214 KICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD- 292 (338)
T ss_pred EEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-
Confidence 77777766543221 112345678999999999899999999999999999997 99999876543333222211
Q ss_pred CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 335 GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 335 ~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.. .......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 293 ~~~-~~~~~~~~~~l~~li~~cl~~d----p~~RPs~~el~~~ 330 (338)
T cd05102 293 GTR-MRAPENATPEIYRIMLACWQGD----PKERPTFSALVEI 330 (338)
T ss_pred CCC-CCCCCCCCHHHHHHHHHHccCC----hhhCcCHHHHHHH
Confidence 111 1122345677889999998888 9999999999864
No 132
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.4e-43 Score=328.00 Aligned_cols=252 Identities=21% Similarity=0.394 Sum_probs=204.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeec-----
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY----- 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~----- 164 (411)
.++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.+++++ .|+|+ +++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-----ATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCe-----eeEeeEEeecCCCC
Confidence 4679999999999999999999999999999999976655566788899999988 46666 999998864
Q ss_pred -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
...+|+||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.++
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~----------- 148 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA----------- 148 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC-----------
Confidence 34789999999 88999999875545799999999999999999999999999999999999997766
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg 314 (411)
.++|+|||++..... ......|+..|+|||++.+ ..++.++|||||||++|||++|
T Consensus 149 ----------------~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g 212 (272)
T cd06637 149 ----------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 212 (272)
T ss_pred ----------------CEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhC
Confidence 567777777654322 1233578999999999863 3588899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..||...........+... ..+.......+..+.+++.+|+..+ |.+||++.++++|+||
T Consensus 213 ~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 213 APPLCDMHPMRALFLIPRN--PAPRLKSKKWSKKFQSFIESCLVKN----HSQRPTTEQLMKHPFI 272 (272)
T ss_pred CCCccccCHHHHHHHHhcC--CCCCCCCCCcCHHHHHHHHHHcCCC----hhhCCCHHHHhhCCCC
Confidence 9999766554443333221 1111122345678899999998888 9999999999999997
No 133
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-45 Score=346.15 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=219.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc----chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+.|.-++.||.|+||.||-|++..+.+.||||.+.- ....-.++.+|+..|++++|||+ +.+.++|..+..
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt-----ieYkgCyLre~T 100 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT-----IEYKGCYLREHT 100 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc-----ccccceeeccch
Confidence 357888999999999999999999999999999962 23344678899999999999988 999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
.|||||||-|+-.|++.-.. .++.+.++..|+.+.++||.|||+.+.||||||..|||+++.|
T Consensus 101 aWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g---------------- 163 (948)
T KOG0577|consen 101 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG---------------- 163 (948)
T ss_pred HHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC----------------
Confidence 99999999878888887654 4799999999999999999999999999999999999998877
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC---CCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.|||+|||+|..... ..+++|||+|||||++.. +.|+-++||||||++..||...++|+-..+..
T Consensus 164 -----------~VKLaDFGSAsi~~P-AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM 231 (948)
T KOG0577|consen 164 -----------LVKLADFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 231 (948)
T ss_pred -----------eeeeccccchhhcCc-hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH
Confidence 678888888876543 455799999999999974 47999999999999999999999998888888
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
..+..|.....+. --...+++.+..|+..||++- |..|||..+++.|+|+..-.+
T Consensus 232 SALYHIAQNesPt--Lqs~eWS~~F~~Fvd~CLqKi----pqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 232 SALYHIAQNESPT--LQSNEWSDYFRNFVDSCLQKI----PQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred HHHHHHHhcCCCC--CCCchhHHHHHHHHHHHHhhC----cccCCcHHHHhhcchhccCCC
Confidence 7777776643322 224567888999999999999 999999999999999986544
No 134
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=7.8e-43 Score=322.81 Aligned_cols=249 Identities=28% Similarity=0.428 Sum_probs=206.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+.|++.+.||+|++|.||+|.+..+++.||+|.+.... .....+.+|+.++++++|+++ +++++++..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-----VQYYGCLRDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEccC
Confidence 46899999999999999999999999999999986432 123467789999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+..++||||+ +++|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~------------- 141 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG------------- 141 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence 9999999999 899999998765 689999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.++|+|||.+....... ....|+..|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 142 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~ 207 (263)
T cd06625 142 --------------NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPW 207 (263)
T ss_pred --------------CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence 56777777665432111 2345788999999999989999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
...+.......+... ..........+..+.+++.+|+..+ |.+||++.++++|+||
T Consensus 208 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 208 AEFEAMAAIFKIATQ--PTNPQLPSHVSPDARNFLRRTFVEN----AKKRPSAEELLRHFFV 263 (263)
T ss_pred cccchHHHHHHHhcc--CCCCCCCccCCHHHHHHHHHHhhcC----cccCCCHHHHhhCCCC
Confidence 876555444433322 1222233456778899999999888 9999999999999997
No 135
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-42 Score=319.30 Aligned_cols=249 Identities=24% Similarity=0.385 Sum_probs=209.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|.+.+.||+|++|.||+|.+..+++.|++|.+... ......+.+|+.+++.++|+|+ +++++.+...+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI-----IRYYESFLDKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCe-----ehheeeeccCCEEE
Confidence 488999999999999999999999999999998642 3455677889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~----------------- 138 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD----------------- 138 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC-----------------
Confidence 999999 99999999876445799999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++....... ....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..+
T Consensus 139 ----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 208 (256)
T cd08529 139 ----------NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA 208 (256)
T ss_pred ----------CEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56677777665433221 23467889999999999899999999999999999999999998877655
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.... .+ .....++..+.+++.+|++.+ |++||++.++++|+|+
T Consensus 209 ~~~~~~~~~--~~-~~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 209 LILKIIRGV--FP-PVSQMYSQQLAQLIDQCLTKD----YRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHcCC--CC-CCccccCHHHHHHHHHHccCC----cccCcCHHHHhhCCCC
Confidence 555444322 21 122256778899999998888 9999999999999996
No 136
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=7.8e-43 Score=330.94 Aligned_cols=257 Identities=24% Similarity=0.371 Sum_probs=207.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||+|+||.||++.+..++..||+|.++.. ......+.+|+++++++.|+|+ +++++.+..++.++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-----VGFYGAFYSDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeCCEEE
Confidence 3699999999999999999999999999999998643 2334567889999999988887 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+||||+ +++|.+++.+.. .+++..+..++.||+.||.|||+ .+++|+||||+|||++.++
T Consensus 76 lv~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~---------------- 137 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG---------------- 137 (308)
T ss_pred EEeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC----------------
Confidence 999999 899999998764 68999999999999999999998 5999999999999998776
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+....
T Consensus 138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~ 206 (308)
T cd06615 138 -----------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL 206 (308)
T ss_pred -----------cEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence 4677777766543221 2345789999999999888899999999999999999999999976543332
Q ss_pred HHHHHHHhCCC----------------------------------ChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 327 LAMMERVLGPL----------------------------------PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 327 ~~~i~~~~~~~----------------------------------p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
...+....... |......++..+.+++.+||..+ |++||++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~ 282 (308)
T cd06615 207 EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN----PKERADLK 282 (308)
T ss_pred HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC----hhhCcCHH
Confidence 22221110000 00000124567889999999999 99999999
Q ss_pred HHHhcCCCCccccc
Q 015222 373 AVWKLLRLPVIDLY 386 (411)
Q Consensus 373 ~il~~~~~~~~~~~ 386 (411)
++++|+||.+....
T Consensus 283 ~ll~~~~~~~~~~~ 296 (308)
T cd06615 283 ELTKHPFIKRAELE 296 (308)
T ss_pred HHhcChhhhhcccc
Confidence 99999999876544
No 137
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-42 Score=324.93 Aligned_cols=251 Identities=30% Similarity=0.534 Sum_probs=203.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.+.||+|+||.||+|.++.+++.||+|++.... ...+.+.+|+.+++++.|+|+ +++++++...+..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL-----VNLIEVFRRKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE-----eeeeeEEeeCCEE
Confidence 47999999999999999999999999999999986432 234557789999999988776 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++||||+ ++.|..++.... .+++..++.++.||+.||+|||+.||+|+||||+||+++.++
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~---------------- 137 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG---------------- 137 (286)
T ss_pred EEEEeccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC----------------
Confidence 9999999 666665554433 689999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++....... ....++..|+|||++.+. .++.++|||||||++|+|++|..||.+.+.
T Consensus 138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~ 206 (286)
T cd07847 138 -----------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSD 206 (286)
T ss_pred -----------cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 56677777665443222 234578899999998764 688999999999999999999999998777
Q ss_pred HHHHHHHHHHhCCCCh---------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 324 LEHLAMMERVLGPLPH---------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~---------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
.+....+....+.... ......+..+.+++.+|+..+ |++||++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~eil~ 282 (286)
T cd07847 207 VDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMD----PTERLSCEELLE 282 (286)
T ss_pred HHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCC----ccccCCHHHHhc
Confidence 6665555443221111 112345677889999999888 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
|+||
T Consensus 283 ~~~f 286 (286)
T cd07847 283 HPYF 286 (286)
T ss_pred CCCC
Confidence 9997
No 138
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.1e-42 Score=329.88 Aligned_cols=260 Identities=28% Similarity=0.407 Sum_probs=211.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-- 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-- 165 (411)
.++|++.+.||+|+||.||+|.+..+|+.||+|+++.... ......+|+.++++++|+++ +++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI-----VELKEVVVGKHL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCC-----cceEEEEecCCC
Confidence 3679999999999999999999999999999999864321 22345679999999998887 9999988654
Q ss_pred CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
+.+++||||++++|.+++.... ..+++..+..++.||+.||+|||+.|++||||||+||+++.++
T Consensus 81 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-------------- 145 (309)
T cd07845 81 DSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG-------------- 145 (309)
T ss_pred CeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--------------
Confidence 5789999999879999887643 4689999999999999999999999999999999999998776
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+...... .....++..|+|||++.+. .++.++|||||||++|||++|+.||.+.
T Consensus 146 -------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 146 -------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred -------------CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5666666666543322 1223457889999998764 6899999999999999999999999988
Q ss_pred ChHHHHHHHHHHhCCCChhHH--------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHH
Q 015222 322 ENLEHLAMMERVLGPLPHHMV--------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~--------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il 375 (411)
+..+.+..+....+..+...+ ...++.+.++|.+||..| |.+||++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d----p~~R~t~~~il 288 (309)
T cd07845 213 SEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYD----PKKRATAEEAL 288 (309)
T ss_pred CHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCC----hhhCcCHHHHh
Confidence 888877777665432222111 124677889999999999 99999999999
Q ss_pred hcCCCCcccccC
Q 015222 376 KLLRLPVIDLYS 387 (411)
Q Consensus 376 ~~~~~~~~~~~~ 387 (411)
+|+||.......
T Consensus 289 ~h~~f~~~~~~~ 300 (309)
T cd07845 289 ESSYFKEKPLPC 300 (309)
T ss_pred cChhhccCCCCC
Confidence 999999777654
No 139
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.5e-42 Score=324.88 Aligned_cols=252 Identities=31% Similarity=0.496 Sum_probs=206.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.|++++.||.|++|.||+|++..+++.||||.++... .....+.+|++++++++|+|+ +++++++.+++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCC-----cchhhhcccCCcEE
Confidence 4899999999999999999999999999999986432 223567889999999998887 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||+.++|.+++.......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~------------------ 137 (284)
T cd07860 76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG------------------ 137 (284)
T ss_pred EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence 99999977999998876555799999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCC-CCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||++.+.. ++.++|||||||++|+|+||+.||.+.+..+
T Consensus 138 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 208 (284)
T cd07860 138 ---------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 208 (284)
T ss_pred ---------CEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 56777777665432221 2235688899999987754 6889999999999999999999998877665
Q ss_pred HHHHHHHHhCCCChh-------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHH-------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~-------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.+..+..+.. ....++..+.++|.+|++.| |++||+++++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYD----PNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCC----cccCCCHHHHhcCCCC
Confidence 555544433322211 11234567888999999998 9999999999999997
No 140
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8e-43 Score=362.16 Aligned_cols=280 Identities=25% Similarity=0.401 Sum_probs=218.4
Q ss_pred eeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeee
Q 015222 85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW 161 (411)
Q Consensus 85 ~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~ 161 (411)
..++.+.++|+++++||+|+||+||+|.+..+++.||+|++... ......+..|+.++++|.|++| ++++++
T Consensus 6 ~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNI-----Vrl~d~ 80 (1021)
T PTZ00266 6 DDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNI-----VRYIDR 80 (1021)
T ss_pred cCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCc-----CeEEEE
Confidence 34566678999999999999999999999999999999998642 2345668889999999998887 999998
Q ss_pred eec--CCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCcEEEec
Q 015222 162 FDY--RNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHEL-------RLIHTDLKPENILLVS 229 (411)
Q Consensus 162 ~~~--~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-------givH~Dikp~NIli~~ 229 (411)
|.. ...+||||||+ +++|.++|.... ...+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 854 46799999999 899999997531 23699999999999999999999984 4999999999999976
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC--CCCccchhHHHH
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVG 305 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG 305 (411)
... .+.+.... ....+....+||+|||++...... .....||+.|+|||++.+. .++.++||||||
T Consensus 161 ~~~-~lg~i~~~---------~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG 230 (1021)
T PTZ00266 161 GIR-HIGKITAQ---------ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALG 230 (1021)
T ss_pred Ccc-cccccccc---------ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHH
Confidence 421 11110000 011234456999999998765432 2345799999999998653 588999999999
Q ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 306 CILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 306 vil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
||||||++|..||...+....+.........++ ....+..+.+||..||..+ |.+||++.++|.|+|+..+..
T Consensus 231 ~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp---i~~~S~eL~dLI~~~L~~d----PeeRPSa~QlL~h~~ik~i~~ 303 (1021)
T PTZ00266 231 CIIYELCSGKTPFHKANNFSQLISELKRGPDLP---IKGKSKELNILIKNLLNLS----AKERPSALQCLGYQIIKNVGP 303 (1021)
T ss_pred HHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC---cCCCCHHHHHHHHHHhcCC----hhHCcCHHHHhccHHHhhcCC
Confidence 999999999999987665444333322222222 1335678999999999999 999999999999999987755
Q ss_pred c
Q 015222 386 Y 386 (411)
Q Consensus 386 ~ 386 (411)
.
T Consensus 304 p 304 (1021)
T PTZ00266 304 P 304 (1021)
T ss_pred C
Confidence 4
No 141
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.9e-43 Score=336.69 Aligned_cols=260 Identities=18% Similarity=0.243 Sum_probs=202.8
Q ss_pred EEeeeccc--cceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 96 ILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 96 i~~~lG~G--~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
++++||+| +|++||++.++.+|+.||+|+++.. ....+.+.+|+.+++.++|+|| +++++++..++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpni-----v~~~~~~~~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNI-----VPYRATFIADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEEECCEEEE
Confidence 56789999 7899999999999999999999753 2344567789999999988887 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+++.||+...
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~------- 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNL------- 149 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhh-------
Confidence 99999 8999999976544469999999999999999999999999999999999999998877777765322
Q ss_pred ccccCCCCCCeeEeecCCcccc-cCCCcccccCCCccccceecC--CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.+.++|..... ........++..|+|||++.+ ..++.++|||||||++|||++|+.||........
T Consensus 150 -----------~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 218 (327)
T cd08227 150 -----------SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 218 (327)
T ss_pred -----------ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence 22222221111 111122356778999999976 3689999999999999999999999986554333
Q ss_pred HHHHHHHhCCCC--------------------------------------------hhHHHhhhhhhhhhhccCCccCCC
Q 015222 327 LAMMERVLGPLP--------------------------------------------HHMVIRADRRAEKYFRRGARLDWP 362 (411)
Q Consensus 327 ~~~i~~~~~~~p--------------------------------------------~~~~~~~~~~~~~li~~~l~~~~~ 362 (411)
...... +..+ .......+..+.+++.+||..|
T Consensus 219 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d-- 294 (327)
T cd08227 219 LLEKLN--GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRN-- 294 (327)
T ss_pred HHHHhc--CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhC--
Confidence 222211 1111 0011224567889999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCccc
Q 015222 363 DGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 363 ~rp~~R~t~~~il~~~~~~~~~ 384 (411)
|.+|||++++++|+||+++.
T Consensus 295 --P~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 295 --PDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred --chhcCCHHHHhcChhhhhcc
Confidence 99999999999999998765
No 142
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.5e-42 Score=318.37 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=205.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-CCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~ 168 (411)
+|++.+.||+|++|.||++.++.+++.||+|.+.... ...+.+.+|+.+++++.|+++ +++++.+.. +..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI-----VAYRESWEGEDGLL 75 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCe-----eeeeeeecCCCCEE
Confidence 4899999999999999999999999999999986432 334567889999999988877 888887764 4578
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.......+++..+..++.|++.||++||+.||+|+||||+||+++.++
T Consensus 76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~---------------- 139 (257)
T cd08223 76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN---------------- 139 (257)
T ss_pred EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC----------------
Confidence 9999999 89999999875545689999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++...... .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...+..
T Consensus 140 -----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 208 (257)
T cd08223 140 -----------IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN 208 (257)
T ss_pred -----------cEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH
Confidence 5677777766543221 22346889999999999989999999999999999999999999877665
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.....+..... + ......+..+.+++.+|++.+ |..||++.++++||||
T Consensus 209 ~~~~~~~~~~~--~-~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 209 SLVYRIIEGKL--P-PMPKDYSPELGELIATMLSKR----PEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHhcCC--C-CCccccCHHHHHHHHHHhccC----cccCCCHHHHhcCCCC
Confidence 55444433222 1 122356778999999999998 9999999999999997
No 143
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2e-42 Score=324.03 Aligned_cols=252 Identities=33% Similarity=0.513 Sum_probs=209.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++++.|+++ +++++++..++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYV-----VKLLDVFPHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCC-----cceeeEEecCCeeE
Confidence 5899999999999999999999999999999987432 334678899999999988777 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||++++|.+++.... ..+++..++.++.||+.||+|||+.||+|+||||+||+++.++
T Consensus 76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~------------------ 136 (286)
T cd07832 76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG------------------ 136 (286)
T ss_pred EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC------------------
Confidence 999999999999987654 4699999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||.+...... .....|+..|+|||++.+. .++.++|||||||++|||++|.+||.+.+..
T Consensus 137 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~ 207 (286)
T cd07832 137 ---------VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI 207 (286)
T ss_pred ---------cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH
Confidence 5677777766544322 2234688999999998765 5689999999999999999999999887776
Q ss_pred HHHHHHHHHhCCCCh--------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 325 EHLAMMERVLGPLPH--------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~--------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+.+..+....+.... ......+..+.++|.+||..+ |.+||+++++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~R~~~~~~l~h~ 283 (286)
T cd07832 208 EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYD----PSKRLSAAEALRHP 283 (286)
T ss_pred HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccC----hhhCCCHHHHhhCc
Confidence 666655543332211 111234677889999999998 99999999999999
Q ss_pred CCC
Q 015222 379 RLP 381 (411)
Q Consensus 379 ~~~ 381 (411)
||.
T Consensus 284 ~~~ 286 (286)
T cd07832 284 YFT 286 (286)
T ss_pred CcC
Confidence 984
No 144
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.3e-42 Score=333.52 Aligned_cols=262 Identities=29% Similarity=0.501 Sum_probs=207.4
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-- 165 (411)
+.++|++.++||+|+||.||+|.+..+|+.||||++... ......+.+|+.++++++|+|+ +++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~ 77 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI-----IGILDIIRPPSF 77 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCc-----Cchhheeecccc
Confidence 457899999999999999999999999999999998642 2344567789999999998887 8888765433
Q ss_pred ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 166 ---NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 166 ---~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
.+.|+||||++++|.+++... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~---------- 144 (336)
T cd07849 78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD---------- 144 (336)
T ss_pred cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCC----------
Confidence 468999999988999888654 5999999999999999999999999999999999999987774
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~ 315 (411)
++|+|||++...... .....||..|+|||.+.+ ..++.++|||||||++|+|++|+
T Consensus 145 -----------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~ 207 (336)
T cd07849 145 -----------------LKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207 (336)
T ss_pred -----------------EEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 555555555432211 122468899999998765 46899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChh---------------------------HHHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHH---------------------------MVIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~---------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
.||.+.+.......+....+..+.. ..+..+..+.+++.+||+.+ |.+|
T Consensus 208 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----P~~R 283 (336)
T cd07849 208 PLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN----PHKR 283 (336)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC----hhhC
Confidence 9998776655554444433322111 11234667889999999888 9999
Q ss_pred HHHHHHHhcCCCCcccccCCCC
Q 015222 369 DSMRAVWKLLRLPVIDLYSASP 390 (411)
Q Consensus 369 ~t~~~il~~~~~~~~~~~~~~~ 390 (411)
|++.++++|+||......+..|
T Consensus 284 pt~~e~l~hp~~~~~~~~~~~~ 305 (336)
T cd07849 284 ITVEEALAHPYLEQYHDPSDEP 305 (336)
T ss_pred cCHHHHhcCccccccCCCCCcc
Confidence 9999999999999776554433
No 145
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-44 Score=366.68 Aligned_cols=255 Identities=24% Similarity=0.345 Sum_probs=215.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|.|++.||+|+||.|.+++++.|++.||+|++++.. .....|..|-.+|..-+.+ -|+.++-.|.+++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~-----Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE-----WIVQLHYAFQDER 148 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH-----HHHHHHHHhcCcc
Confidence 358999999999999999999999999999999998632 2345567788887765544 4499999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
++|+||||+ ||+|..++.+.. .++++.++.++..|+.||.-||+.|+|||||||+||||+..|++
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHi------------ 214 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHI------------ 214 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcE------------
Confidence 999999999 999999999886 79999999999999999999999999999999999999988855
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~ 316 (411)
||+|||.+-....+ ....+|||.|+|||++.. +.|++.+|+||+||++|||+.|..
T Consensus 215 ---------------kLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T 279 (1317)
T KOG0612|consen 215 ---------------KLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET 279 (1317)
T ss_pred ---------------eeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC
Confidence 55555544333211 234689999999999963 468999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHH--hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH---HHHHHhcCCCCccccc
Q 015222 317 LFQTHENLEHLAMMERV--LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t---~~~il~~~~~~~~~~~ 386 (411)
||...+-.+.+.+|... ...||... .++.+++++|.+.+.- |..|.. ++++..||||.+++|.
T Consensus 280 PFYadslveTY~KIm~hk~~l~FP~~~--~VSeeakdLI~~ll~~-----~e~RLgrngiedik~HpFF~g~~W~ 347 (1317)
T KOG0612|consen 280 PFYADSLVETYGKIMNHKESLSFPDET--DVSEEAKDLIEALLCD-----REVRLGRNGIEDIKNHPFFEGIDWD 347 (1317)
T ss_pred cchHHHHHHHHHHHhchhhhcCCCccc--ccCHHHHHHHHHHhcC-----hhhhcccccHHHHHhCccccCCChh
Confidence 99999888999888876 45677443 4899999999988643 677777 9999999999999983
No 146
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=7.5e-43 Score=326.27 Aligned_cols=254 Identities=21% Similarity=0.331 Sum_probs=204.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++++.|+++ +++++.+...+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI-----IGFYGAFFVENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEECCEEE
Confidence 3688999999999999999999999999999998643 2344568889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|..+ ..+++..+..++.|++.||+|||+.||+|+||||+|||++.++
T Consensus 76 lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~----------------- 132 (279)
T cd06619 76 ICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG----------------- 132 (279)
T ss_pred EEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC-----------------
Confidence 999999 8888654 1478899999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccC-CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH--
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE-- 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~-- 325 (411)
.++|+|||++..... ......||..|+|||++.+..++.++|||||||++|+|++|+.||......+
T Consensus 133 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~ 202 (279)
T cd06619 133 ----------QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS 202 (279)
T ss_pred ----------CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc
Confidence 577788887764332 2334578999999999999899999999999999999999999996532211
Q ss_pred --HHHHHHHHhCCCChh-HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 326 --HLAMMERVLGPLPHH-MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 326 --~~~~i~~~~~~~p~~-~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
............+.. .....+..+.+++.+|+..+ |.+||+++++++|+||...+...
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rp~~~eil~~~~~~~~~~~~ 263 (279)
T cd06619 203 LMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQ----PKERPAPENLMDHPFIVQYNDGN 263 (279)
T ss_pred cchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCC----hhhCCCHHHHhcCcccccccCcc
Confidence 111111111111111 12235667899999999988 99999999999999998875443
No 147
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.1e-42 Score=329.08 Aligned_cols=250 Identities=24% Similarity=0.450 Sum_probs=191.9
Q ss_pred eeeccccceEEEEEEeCC--CCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~--~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~e 173 (411)
.+||+|+||+||+|+++. ++..||+|.+.... ....+.+|+.+++.++|+|+ +++++++.. +...++|||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNV-----IALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCe-----eeEEEEEeccCCCeEEEEEe
Confidence 589999999999999654 56889999987543 23457789999999988877 999998743 568899999
Q ss_pred cCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 174 KLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 174 ~~~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
|++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+..++
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~--------------- 145 (317)
T cd07867 81 YAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------- 145 (317)
T ss_pred eeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC---------------
Confidence 99889998875321 12588999999999999999999999999999999999995432
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
+.+..+||+|||++...... .....||+.|+|||++.+. .++.++|||||||++|||+||++||.
T Consensus 146 --------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 146 --------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred --------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 23347889999988754332 1235789999999999874 58999999999999999999999997
Q ss_pred CCChH---------HHHHHHHHHhCCCChhHH----------------------------------HhhhhhhhhhhccC
Q 015222 320 THENL---------EHLAMMERVLGPLPHHMV----------------------------------IRADRRAEKYFRRG 356 (411)
Q Consensus 320 ~~~~~---------~~~~~i~~~~~~~p~~~~----------------------------------~~~~~~~~~li~~~ 356 (411)
..... ..+..+....+......+ ...+..+.+++.+|
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 297 (317)
T cd07867 218 CRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKL 297 (317)
T ss_pred cccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHH
Confidence 54321 122222222221111000 01234577899999
Q ss_pred CccCCCCCCCcHHHHHHHHhcCCC
Q 015222 357 ARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 357 l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
|..| |.+|||+.|+++||||
T Consensus 298 l~~d----P~~R~t~~e~l~hp~f 317 (317)
T cd07867 298 LTMD----PTKRITSEQALQDPYF 317 (317)
T ss_pred hccC----cccccCHHHHhcCCCC
Confidence 9999 9999999999999997
No 148
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-42 Score=326.17 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=209.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..+|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+.|+|+ +++++.+..+.+.|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----~~~~~~~~~~~~~~ 93 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDELW 93 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCE-----eeEEEEEEeCCEEE
Confidence 368999999999999999999999999999999987433 334667789999999888776 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++... .+++..+..++.|++.||.|||+.||+|+||||+|||++.++
T Consensus 94 lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~----------------- 153 (296)
T cd06654 94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----------------- 153 (296)
T ss_pred EeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC-----------------
Confidence 999999 99999998754 489999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+...... .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+...
T Consensus 154 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~ 223 (296)
T cd06654 154 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR 223 (296)
T ss_pred ----------CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5677777766543221 123468899999999998889999999999999999999999998766544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
....+... ...+......++..+.+++.+|+..+ |..||++.++++|+|+.....
T Consensus 224 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 224 ALYLIATN-GTPELQNPEKLSAIFRDFLNRCLDMD----VEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred hHHHHhcC-CCCCCCCccccCHHHHHHHHHHCcCC----cccCcCHHHHhhChhhhccCC
Confidence 43333221 11111222346677899999998888 999999999999999987543
No 149
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.5e-42 Score=333.07 Aligned_cols=265 Identities=26% Similarity=0.468 Sum_probs=213.4
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
+.++|++.+.||+|+||+||+|++..+++.||||.+... ......+.+|+.+++.+.|+|+ +++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----~~~~~~~~~~~ 77 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENV-----IAIKDIMPPPH 77 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCc-----cchHHheeccc
Confidence 456899999999999999999999999999999998642 2234556789999999988887 8888877643
Q ss_pred ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 166 ----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 166 ----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
...|+||||++++|.+++.... .+++..+..++.||+.||.|||++|++||||||+||+++.++
T Consensus 78 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~---------- 145 (337)
T cd07858 78 REAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC---------- 145 (337)
T ss_pred ccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC----------
Confidence 3589999999889999987654 699999999999999999999999999999999999998766
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.|
T Consensus 146 -----------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~p 208 (337)
T cd07858 146 -----------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL 208 (337)
T ss_pred -----------------CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCC
Confidence 5667777766543322 123467889999998875 4689999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCCh---------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHH
Q 015222 318 FQTHENLEHLAMMERVLGPLPH---------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDS 370 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~---------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t 370 (411)
|.+.+.......+....+..+. ......+..+.+++.+||+.+ |++||+
T Consensus 209 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rps 284 (337)
T cd07858 209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD----PSKRIT 284 (337)
T ss_pred CCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC----hhhccC
Confidence 9887665555555444332221 112345677889999999999 999999
Q ss_pred HHHHHhcCCCCcccccCCCCCc
Q 015222 371 MRAVWKLLRLPVIDLYSASPNC 392 (411)
Q Consensus 371 ~~~il~~~~~~~~~~~~~~~~~ 392 (411)
++++++|+||..+......+-.
T Consensus 285 ~~ell~h~~~~~~~~~~~~~~~ 306 (337)
T cd07858 285 VEEALAHPYLASLHDPSDEPVC 306 (337)
T ss_pred HHHHHcCcchhhhcCcccCccC
Confidence 9999999999887666555443
No 150
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-42 Score=326.24 Aligned_cols=255 Identities=25% Similarity=0.378 Sum_probs=211.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.+|++.+.||.|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+.|+|+ +.+++++...+.+++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI-----VNFLDSFLVGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCce-----eeeeeeEecCceEEE
Confidence 57999999999999999999999999999999986432 334667889999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++... .+++..+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~------------------ 152 (296)
T cd06655 94 VMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG------------------ 152 (296)
T ss_pred EEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC------------------
Confidence 99999 99999988764 489999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...... .....|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 153 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~ 223 (296)
T cd06655 153 ---------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (296)
T ss_pred ---------CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 4666777765543222 1234688899999999988899999999999999999999999988776555
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
...+.... ..+......++..+.++|.+|+..+ |.+||++.++++|+||......
T Consensus 224 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~d----p~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 224 LYLIATNG-TPELQNPEKLSPIFRDFLNRCLEMD----VEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred HHHHHhcC-CcccCCcccCCHHHHHHHHHHhhcC----hhhCCCHHHHhhChHhhhcccc
Confidence 44443321 1111223346678889999998888 9999999999999999876543
No 151
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.8e-42 Score=325.77 Aligned_cols=258 Identities=22% Similarity=0.397 Sum_probs=208.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.+.|+++++||.|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+.|+++ +++++.+..++..|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI-----VKLLGAFYWDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcE-----eeeEEEEEeCCeEE
Confidence 367999999999999999999999999999999987543 345667889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|..++.+.. ..+++..+..++.||+.||+|||+.||+||||||+||+++.++
T Consensus 86 lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~----------------- 147 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG----------------- 147 (292)
T ss_pred EEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC-----------------
Confidence 999999 889988876543 3689999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-----CCCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
.++|+|||.+...... .....++..|+|||++.+ ..++.++|||||||++|+|++|..||..
T Consensus 148 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 148 ----------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ----------CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 5677777766543221 223467889999999853 3578899999999999999999999987
Q ss_pred CChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.+.......+.....+ .......++..+.+++.+|+..+ |++||++.++++|+|+..+...
T Consensus 218 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 218 LNPMRVLLKIAKSEPP-TLSQPSKWSMEFRDFLKTALDKH----PETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred ccHHHHHHHHhcCCCc-cCCCCcccCHHHHHHHHHHhcCC----cccCcCHHHHhcCccccccccc
Confidence 6655544444322111 11112345667889999998888 9999999999999999876653
No 152
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.4e-43 Score=327.72 Aligned_cols=259 Identities=19% Similarity=0.315 Sum_probs=212.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++++.||+|+||.||+|.+..+++.||+|.++.. ......+.+|+.+++++.|+|+ +++++.+...+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-----VDFYGAFFIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-----HhhhhheecCCeEE
Confidence 3689999999999999999999999999999988642 2334567889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+||||+ +++|.+++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--------------- 140 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--------------- 140 (286)
T ss_pred EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC---------------
Confidence 999999 889999887642 2368999999999999999999997 5999999999999997765
Q ss_pred CCCccccCCCCCCeeEeecCCcccccC-CCcccccCCCccccceecCC------CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGL------GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.++|+|||.+..... ......|+..|+|||++.+. .++.++|||||||++|+|++|+.||.
T Consensus 141 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 141 ------------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred ------------CEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 578888887764422 22334678899999998654 35889999999999999999999998
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
..........+.......+......++..+.+++.+|+..+ |.+||++.++++|+||......
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 209 PETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKI----PNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred CcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccC----cccCCCHHHHhcChhhhhccCC
Confidence 76555555444444333344444557888999999999888 9999999999999999876643
No 153
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-43 Score=324.40 Aligned_cols=260 Identities=22% Similarity=0.299 Sum_probs=217.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.+|..+..||+|+||.|.+|..+.+.+.+|||++++.- ...+-.+.|-.+|.....+ |.+++++..|+.-+.
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kp----pFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP----PFLVQLHSCFQTMDR 424 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCC----chHHHHHHHhhhhhh
Confidence 57899999999999999999999999999999998643 2233345677776655444 456999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ ||+|.-.+++-+ ++.+..+..++..|+-||-|||++|||.||||.+|||++.+|
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--------------- 487 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--------------- 487 (683)
T ss_pred eeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC---------------
Confidence 99999999 999999998876 799999999999999999999999999999999999999888
Q ss_pred CCCccccCCCCCCeeEeecCCcccc---cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFE---HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
++||+|||++... .....+++|||.|+|||++..++|+.++|+||+||+||||+.|++||.+.++
T Consensus 488 ------------HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE 555 (683)
T KOG0696|consen 488 ------------HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE 555 (683)
T ss_pred ------------ceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH
Confidence 5667777766542 2345668999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-HHHHHHhcCCCCcccccCC
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-t~~~il~~~~~~~~~~~~~ 388 (411)
.+..+.|.......|..+ +.++..++...|.+.|.+|-..-+ .-++|..|+||..++|.-.
T Consensus 556 ~elF~aI~ehnvsyPKsl----SkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~ 617 (683)
T KOG0696|consen 556 DELFQAIMEHNVSYPKSL----SKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL 617 (683)
T ss_pred HHHHHHHHHccCcCcccc----cHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence 999999998888887765 556667777777777544432222 2367889999999998654
No 154
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-42 Score=333.54 Aligned_cols=265 Identities=24% Similarity=0.440 Sum_probs=216.0
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec---
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--- 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--- 164 (411)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.++++++|+++ +++++++..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~ 78 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI-----IAIRDILRPPGA 78 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCc-----cCHHHhccccCC
Confidence 468999999999999999999999999999999987532 334567789999999998877 888887753
Q ss_pred -CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 -RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 -~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
...+++||||++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||+++.+|
T Consensus 79 ~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~------------ 144 (334)
T cd07855 79 DFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC------------ 144 (334)
T ss_pred CCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC------------
Confidence 45789999999879999987654 599999999999999999999999999999999999998877
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~ 315 (411)
.++|+|||++...... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 145 ---------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~ 209 (334)
T cd07855 145 ---------------ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRR 209 (334)
T ss_pred ---------------cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCC
Confidence 4566666655432211 123468889999999866 36899999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhH---------------------------HHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHM---------------------------VIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~---------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
.||.+.+....+..+....+..+... ....+..+.++|.+||+.+ |.+|
T Consensus 210 ~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R 285 (334)
T cd07855 210 QLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD----PEER 285 (334)
T ss_pred CccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC----hhhC
Confidence 99988776666555555444333222 1335677899999999999 9999
Q ss_pred HHHHHHHhcCCCCcccccCCCCCch
Q 015222 369 DSMRAVWKLLRLPVIDLYSASPNCL 393 (411)
Q Consensus 369 ~t~~~il~~~~~~~~~~~~~~~~~~ 393 (411)
|++.+++.|+||.....+...+.+-
T Consensus 286 pt~~~~l~~~~~~~~~~~~~~~~~~ 310 (334)
T cd07855 286 ITVEQALQHPFLAQYHDPDDEPTCP 310 (334)
T ss_pred cCHHHHHhChhhhhccCCcccccCC
Confidence 9999999999999888888777763
No 155
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.5e-42 Score=319.15 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=202.7
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHH-HHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQ-RLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~-~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|.+..+++.||+|++..... .......|..++. ...|+ |++++++.+..++..|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESP-----YVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCC-----CeeeeeeeEEcCCeEEEEE
Confidence 578999999999999999999999999875321 1122333433332 23444 5599999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.||+.||.|||+.|++|+||+|+||+++.++
T Consensus 77 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~-------------------- 134 (260)
T cd05611 77 EYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG-------------------- 134 (260)
T ss_pred eccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--------------------
Confidence 999 999999998765 689999999999999999999999999999999999997765
Q ss_pred ccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||++..... .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...+..+....+.
T Consensus 135 -------~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 206 (260)
T cd05611 135 -------HLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNIL 206 (260)
T ss_pred -------cEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 577888887665432 233468889999999998889999999999999999999999998877766666655
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH---HHHHHHhcCCCCcccc
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD---SMRAVWKLLRLPVIDL 385 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~---t~~~il~~~~~~~~~~ 385 (411)
......+......++..+.+++.+||..+ |+.|+ ++++++.||||.++.|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 207 SRRINWPEEVKEFCSPEAVDLINRLLCMD----PAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred hcccCCCCcccccCCHHHHHHHHHHccCC----HHHccCCCcHHHHHcChHhhcCCC
Confidence 54444444444567888999999999999 88888 5689999999998775
No 156
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.9e-42 Score=325.60 Aligned_cols=273 Identities=22% Similarity=0.308 Sum_probs=211.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++++.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.+.|+|+ +++++.+..+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-----VSMFCSFETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEecCCE
Confidence 36999999999999999999999999999999987542 234567789999999888776 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+++||||+ +++|.+++.... .+++..+..++.|++.||+|||++|++||||||+||+++.++.++++|||+.+....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999 899999997765 689999999999999999999999999999999999998887665555554321100
Q ss_pred CCCccccCCCCCCeeEeecCCcccc-cCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.. ...+.+....... ........|+..|+|||.+.+..++.++|||||||++|||++|..||.+.+..+
T Consensus 154 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~ 223 (305)
T cd05609 154 SL----------TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 223 (305)
T ss_pred Cc----------cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 00 0000000000000 001112357889999999998889999999999999999999999998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH---HHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t---~~~il~~~~~~~~~~~ 386 (411)
....+.......|... ...+..+.+++.+|++.+ |.+||+ +.++++|+||...++.
T Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~----P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 224 LFGQVISDDIEWPEGD-EALPADAQDLISRLLRQN----PLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred HHHHHHhcccCCCCcc-ccCCHHHHHHHHHHhccC----hhhccCccCHHHHHhCccccCCCHH
Confidence 6665554433333321 246778899999999999 778876 8999999999876653
No 157
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.1e-42 Score=326.55 Aligned_cols=252 Identities=26% Similarity=0.454 Sum_probs=203.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC---
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--- 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--- 165 (411)
++|++.++||+|+||.||+|.+..+++.||||.+.... .....+.+|+.+++++.|+++ +++++++...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~ 86 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKATP 86 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCc-----cceEEEEeccccc
Confidence 57999999999999999999999999999999986432 223445679999999999888 8888877553
Q ss_pred -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
...++||||++++|.+++.... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~-------- 157 (310)
T cd07865 87 YNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGI-------- 157 (310)
T ss_pred ccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCc--------
Confidence 3569999999889998887653 36899999999999999999999999999999999999987774
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHH
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell 312 (411)
++|+|||.+...... .....++..|+|||.+.+. .++.++||||||+++|||+
T Consensus 158 -------------------~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~ 218 (310)
T cd07865 158 -------------------LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMW 218 (310)
T ss_pred -------------------EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHH
Confidence 555566555432211 1223578889999988765 4789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHh----------------------------hhhhhhhhhccCCccCCCCC
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIR----------------------------ADRRAEKYFRRGARLDWPDG 364 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~----------------------------~~~~~~~li~~~l~~~~~~r 364 (411)
+|+.||.+.+.......+....+.++....+. .+..+.++|.+||..+
T Consensus 219 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~---- 294 (310)
T cd07865 219 TRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLD---- 294 (310)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCC----
Confidence 99999998887777777777666554433221 1345678999999888
Q ss_pred CCcHHHHHHHHhcCCC
Q 015222 365 ATSRDSMRAVWKLLRL 380 (411)
Q Consensus 365 p~~R~t~~~il~~~~~ 380 (411)
|.+||++.++++|+||
T Consensus 295 P~~R~t~~e~l~h~~f 310 (310)
T cd07865 295 PAKRIDADTALNHDFF 310 (310)
T ss_pred hhhccCHHHHhcCCCC
Confidence 9999999999999997
No 158
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-42 Score=327.98 Aligned_cols=258 Identities=25% Similarity=0.380 Sum_probs=211.5
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.+.|+++ +++++++..+++.+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~ 92 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDELW 92 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCEEE
Confidence 478999999999999999999999999999999986433 334567789999999888877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.+. .+++..+..++.|++.||.|||+.||+||||||+|||++.++
T Consensus 93 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~----------------- 152 (297)
T cd06656 93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG----------------- 152 (297)
T ss_pred EeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------------
Confidence 999999 99999998764 489999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+...... .....+++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 153 ----------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~ 222 (297)
T cd06656 153 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (297)
T ss_pred ----------CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch
Confidence 5666667665543222 123467889999999999889999999999999999999999998765544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
....+.. .+..+.......+..+.+++.+|+..+ |..||++.++++|+||........
T Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 223 ALYLIAT-NGTPELQNPERLSAVFRDFLNRCLEMD----VDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred heeeecc-CCCCCCCCccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCchhcccccccc
Confidence 3332222 122222223446677889999998888 999999999999999998766543
No 159
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.9e-42 Score=323.19 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=201.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||+|++|.||+|.++.+++.||||.+.... .....+.+|+.++++++|+++ +++++++.+.+..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANI-----VTLHDIIHTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcce-----eeEEEEEecCCeEE
Confidence 67999999999999999999999999999999986432 223456789999999988877 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||+.++|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+||+++++|
T Consensus 80 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~------------------ 140 (291)
T cd07844 80 LVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG------------------ 140 (291)
T ss_pred EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC------------------
Confidence 999999779999987654 3689999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC-hH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE-NL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~-~~ 324 (411)
.++|+|||.+...... .....++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.. ..
T Consensus 141 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~ 211 (291)
T cd07844 141 ---------ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211 (291)
T ss_pred ---------CEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 4566666665433211 1123467889999998764 68999999999999999999999997665 33
Q ss_pred HHHHHHHHHhCCCChhHH--------------------------Hhhh--hhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 325 EHLAMMERVLGPLPHHMV--------------------------IRAD--RRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~--------------------------~~~~--~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+..+.+..+......+ ...+ ..+.+++.+||..+ |..||++.++++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~----p~~Rps~~e~l~ 287 (291)
T cd07844 212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYE----PKKRISAAEAMK 287 (291)
T ss_pred HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccC----cccccCHHHHhc
Confidence 444433333222111111 1122 56779999999999 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
|+||
T Consensus 288 ~~~f 291 (291)
T cd07844 288 HPYF 291 (291)
T ss_pred CCCC
Confidence 9997
No 160
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.4e-42 Score=324.69 Aligned_cols=258 Identities=27% Similarity=0.413 Sum_probs=209.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh------hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
+|++.+.||+|+||.||+|.+..+++.||||.++.... ....+..|+.++++++|+++ +++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNI-----IGLLDVFGHKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCC-----hhhhheeecCC
Confidence 58999999999999999999999999999999975432 23456789999999988877 99999999999
Q ss_pred eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..++||||++++|.+++.... ..+++..+..++.||++||.|||++||+|+||||+||+++.+|
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--------------- 139 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--------------- 139 (298)
T ss_pred EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC---------------
Confidence 999999999889999997654 3699999999999999999999999999999999999998777
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||++...... .....++..|+|||.+.+. .++.++|||||||++|||++|.+||.+.+
T Consensus 140 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~ 207 (298)
T cd07841 140 ------------VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207 (298)
T ss_pred ------------CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence 4566666666543322 1223567889999998654 67899999999999999999999998877
Q ss_pred hHHHHHHHHHHhCCCChhH------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 323 NLEHLAMMERVLGPLPHHM------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
..+.+..+....+...... ....+..+.+++.+||..+ |.+||++.++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~s~~e~l~~~ 283 (298)
T cd07841 208 DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLN----PNKRITARQALEHP 283 (298)
T ss_pred cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCC----cccCcCHHHHhhCc
Confidence 7666555544332221111 1234567889999999998 99999999999999
Q ss_pred CCCcccccC
Q 015222 379 RLPVIDLYS 387 (411)
Q Consensus 379 ~~~~~~~~~ 387 (411)
||.+....-
T Consensus 284 ~~~~~~~~~ 292 (298)
T cd07841 284 YFSNDPAPT 292 (298)
T ss_pred cccCCCCCC
Confidence 999866544
No 161
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.9e-42 Score=323.85 Aligned_cols=252 Identities=23% Similarity=0.399 Sum_probs=205.5
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee------
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD------ 163 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~------ 163 (411)
.+.|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.+++++. |+|+ +++++++.
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~ 89 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNI-----ATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcE-----EEEeeehhcccccC
Confidence 36799999999999999999999999999999998766555567788999999884 5555 99999874
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
..+.+|++|||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||+++.++
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~----------- 158 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA----------- 158 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------
Confidence 246899999999 88999999876555689999999999999999999999999999999999997765
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg 314 (411)
.++|+|||.+..... ......|+..|+|||++. +..++.++|||||||++|||++|
T Consensus 159 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g 222 (282)
T cd06636 159 ----------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222 (282)
T ss_pred ----------------CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhC
Confidence 577888887664332 123356899999999986 34688899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..||...........+.+. ..+......++..+.++|.+|+..+ |.+||++.++++|+||
T Consensus 223 ~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 223 APPLCDMHPMRALFLIPRN--PPPKLKSKKWSKKFIDFIEGCLVKN----YLSRPSTEQLLKHPFI 282 (282)
T ss_pred CCCccccCHHhhhhhHhhC--CCCCCcccccCHHHHHHHHHHhCCC----hhhCcCHHHHhcCCCC
Confidence 9999776554444333222 1222222346778999999999999 9999999999999997
No 162
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.8e-42 Score=323.86 Aligned_cols=259 Identities=29% Similarity=0.463 Sum_probs=212.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.+.||+|++|+||+|.++.+++.||+|.+.... ...+.+.+|+.+++++.|+++ +++++++...+..
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI-----VRLQDVVHSEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCE-----eeEEEEEecCCeE
Confidence 57999999999999999999999999999999986432 233567789999999988877 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
|+||||++++|.+++.......+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~----------------- 139 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT----------------- 139 (294)
T ss_pred EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC-----------------
Confidence 999999987999988766544578899999999999999999999999999999999997533
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
..+||+|||++....... ....+++.|+|||.+.+. .++.++|||||||++|+|++|+.||...+..
T Consensus 140 ---------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~ 210 (294)
T PLN00009 140 ---------NALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210 (294)
T ss_pred ---------CEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 257888888776543221 224678899999998764 5789999999999999999999999887776
Q ss_pred HHHHHHHHHhCCCChh-------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 325 EHLAMMERVLGPLPHH-------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~-------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
+.+..+....+..... .....+..+.+++.+||..+ |++||++.++++|+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----P~~Rps~~~~l~~~~ 286 (294)
T PLN00009 211 DELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLD----PSKRITARAALEHEY 286 (294)
T ss_pred HHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCC----hhhCcCHHHHhcCch
Confidence 6655554433221111 11245677889999999999 999999999999999
Q ss_pred CCcccc
Q 015222 380 LPVIDL 385 (411)
Q Consensus 380 ~~~~~~ 385 (411)
|.+++.
T Consensus 287 ~~~~~~ 292 (294)
T PLN00009 287 FKDLGD 292 (294)
T ss_pred HhHHhc
Confidence 998763
No 163
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=8.5e-42 Score=326.58 Aligned_cols=268 Identities=28% Similarity=0.448 Sum_probs=220.9
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-C
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-R 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~ 165 (411)
+.++|++.+.||.|+||.||+|.+..+++.||+|++... ....+.+..|+.+++.+.|+|+ +++++++.. .
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~ 82 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENI-----ISLSDIFISPL 82 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCe-----eeEeeeEecCC
Confidence 567899999999999999999999999999999987542 2334667789999999988877 999998865 5
Q ss_pred CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
+..++||||++++|.+++... .+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 83 ~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~-------------- 145 (328)
T cd07856 83 EDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC-------------- 145 (328)
T ss_pred CcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--------------
Confidence 689999999988999888754 488999999999999999999999999999999999997665
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||.+...........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..
T Consensus 146 -------------~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~ 212 (328)
T cd07856 146 -------------DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV 212 (328)
T ss_pred -------------CEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 5677777777655444444577889999999876 47899999999999999999999999887765
Q ss_pred HHHHHHHHHhCCCChhHH---------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMV---------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~---------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.....+.+..+..+..+. ...+..+.++|.+|+..+ |.+||++.+++.|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~t~~ell~~ 288 (328)
T cd07856 213 NQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFD----PQKRISAAEALAH 288 (328)
T ss_pred HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCC----hhhCCCHHHHhcC
Confidence 555555444443332221 234567889999999888 9999999999999
Q ss_pred CCCCcccccCCCCCchhhH
Q 015222 378 LRLPVIDLYSASPNCLCKF 396 (411)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~ 396 (411)
+|+.....+-.+|.+.++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~ 307 (328)
T cd07856 289 PYLAPYHDPTDEPVAEEKF 307 (328)
T ss_pred CccccccCCccccCchhhc
Confidence 9999888877777766666
No 164
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=8.8e-42 Score=320.88 Aligned_cols=252 Identities=26% Similarity=0.408 Sum_probs=201.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|+|+ +++++++..++..|
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~~ 79 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-----VLLHDIIHTKETLT 79 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-----eEEEEEEecCCeEE
Confidence 57999999999999999999999999999999986432 223456789999999988877 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||||++++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++
T Consensus 80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~------------------ 140 (291)
T cd07870 80 FVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG------------------ 140 (291)
T ss_pred EEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC------------------
Confidence 999999888888876543 3578899999999999999999999999999999999997766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh-H
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN-L 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~-~ 324 (411)
.++|+|||++...... .....++..|+|||++.+. .++.++|||||||++|+|++|..||.+.+. .
T Consensus 141 ---------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~ 211 (291)
T cd07870 141 ---------ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF 211 (291)
T ss_pred ---------cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH
Confidence 5677777776543221 2234578899999998764 588999999999999999999999976543 2
Q ss_pred HHHHHHHHHhCCCChhHHH----------------------------hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 325 EHLAMMERVLGPLPHHMVI----------------------------RADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~----------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+..+....+..+..... ..+..+.+++.+|+..+ |++|||+.+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d----p~~R~t~~~~l~ 287 (291)
T cd07870 212 EQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMF----PKDRISAQDALL 287 (291)
T ss_pred HHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcC----cccCcCHHHHhc
Confidence 3333333322211111100 11356789999999999 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
|+||
T Consensus 288 h~~~ 291 (291)
T cd07870 288 HPYF 291 (291)
T ss_pred CCCC
Confidence 9997
No 165
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-43 Score=337.54 Aligned_cols=255 Identities=26% Similarity=0.360 Sum_probs=224.5
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
-.+.|.+.+.||+|.|+.|.+|++..++..||||++.+.. .......+|+++++.|+|||| |+++.+.+...
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnI-----vkl~~v~~t~~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNI-----VKLFSVIETEA 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcce-----eeeeeeeeecc
Confidence 3467999999999999999999999999999999998644 334557899999999999988 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+|+||||+ +|.+++++.+++ .+.+..++.++.|+++|++|||+++|||||||++|||++.+
T Consensus 129 ~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~--------------- 191 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDEN--------------- 191 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccc---------------
Confidence 999999999 999999999987 78889999999999999999999999999999999998654
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCC-CccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++||+|||++.+.... ..+.+|++.|+|||++.+..| ++.+|+||+|++||.|+.|..||.+.+
T Consensus 192 ------------mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~ 259 (596)
T KOG0586|consen 192 ------------MNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN 259 (596)
T ss_pred ------------cceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc
Confidence 36899999999876543 356899999999999999876 599999999999999999999999987
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
-.+.-.........+|..+ +.+++++|+++|..+ |.+|.+++++.+|.|+......
T Consensus 260 lk~Lr~rvl~gk~rIp~~m----s~dce~lLrk~lvl~----Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 260 LKELRPRVLRGKYRIPFYM----SCDCEDLLRKFLVLN----PSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred cccccchheeeeeccccee----echhHHHHHHhhccC----ccccCCHHHhhhhcccchhhhh
Confidence 7766666666555666554 567889999999999 9999999999999999865544
No 166
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.5e-42 Score=332.40 Aligned_cols=263 Identities=26% Similarity=0.461 Sum_probs=217.5
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.++|++.+.||+|++|.||+|++..+++.||+|++... ......+.+|+.+++++.|+++ +++++++...
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~ 86 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV-----IGLLDVFTPA 86 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCH-----HHHHHHhhcc
Confidence 3467899999999999999999999999999999998642 2234556789999999988877 8888877655
Q ss_pred Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 166 NH------ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 166 ~~------~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
+. .++|+||++++|.+++... .+++..+..++.||+.||+|||+.||+|+||||+||+++.++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~-------- 155 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC-------- 155 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--------
Confidence 43 8999999999999998764 599999999999999999999999999999999999998766
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.++|+|||.+...........++..|+|||.+.+. .++.++|||||||++|+|++|+.||
T Consensus 156 -------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf 216 (343)
T cd07851 156 -------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLF 216 (343)
T ss_pred -------------------CEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence 57777887776655444555788899999998764 6789999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhH---------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHH
Q 015222 319 QTHENLEHLAMMERVLGPLPHHM---------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSM 371 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~---------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~ 371 (411)
.+.+..+.+..+....+..++.+ ....+..+.++|.+||..+ |.+|||+
T Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~----P~~Rpt~ 292 (343)
T cd07851 217 PGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD----PDKRITA 292 (343)
T ss_pred CCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC----hhhCCCH
Confidence 88877776666665544333222 1234677889999999988 9999999
Q ss_pred HHHHhcCCCCcccccCCCC
Q 015222 372 RAVWKLLRLPVIDLYSASP 390 (411)
Q Consensus 372 ~~il~~~~~~~~~~~~~~~ 390 (411)
.++++|+||.+.......+
T Consensus 293 ~ell~h~~~~~~~~~~~~~ 311 (343)
T cd07851 293 AEALAHPYLAEYHDPEDEP 311 (343)
T ss_pred HHHhcCCCccccCCCcccc
Confidence 9999999999877665444
No 167
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.9e-42 Score=323.06 Aligned_cols=254 Identities=31% Similarity=0.468 Sum_probs=204.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhc-CCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~-~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||||+++... .....+.+|+.+++.+.| +++ +++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i-----~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYI-----VRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCc-----cceeeeEeecCC
Confidence 46999999999999999999999999999999986432 223567789999999964 565 999988876555
Q ss_pred -----EEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCc
Q 015222 168 -----ICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDY 238 (411)
Q Consensus 168 -----~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~-~~~~~l~df 238 (411)
.|+||||+.++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~------- 148 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG------- 148 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCC-------
Confidence 89999999779999887542 235899999999999999999999999999999999999976 44
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhC
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg 314 (411)
.++|+|||.+....... ....+++.|+|||++.+. .++.++|||||||++|+|++|
T Consensus 149 --------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 208 (295)
T cd07837 149 --------------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK 208 (295)
T ss_pred --------------------eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC
Confidence 57778887766432211 223568889999988764 679999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHhCCCCh------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHH
Q 015222 315 EALFQTHENLEHLAMMERVLGPLPH------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDS 370 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~~~p~------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t 370 (411)
..||.+.+..+.+..+.......+. ...+..+..+.++|.+||..+ |.+||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----P~~R~~ 284 (295)
T cd07837 209 QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYD----PAKRIS 284 (295)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCC----hhhcCC
Confidence 9999987776666555443221111 112346778899999999998 999999
Q ss_pred HHHHHhcCCCC
Q 015222 371 MRAVWKLLRLP 381 (411)
Q Consensus 371 ~~~il~~~~~~ 381 (411)
+.+++.|+||+
T Consensus 285 ~~eil~~~~~~ 295 (295)
T cd07837 285 AKAALTHPYFD 295 (295)
T ss_pred HHHHhcCCCcC
Confidence 99999999985
No 168
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-43 Score=333.04 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=208.6
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
...+...+.+.||+|+||+||+|++.. .||||+++. .....+.|.+|+..+++-+|.|| +-+.+++...
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NI-----lLFMG~~~~p 460 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENI-----LLFMGACMNP 460 (678)
T ss_pred cCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhh-----eeeehhhcCC
Confidence 344566788999999999999997753 399999974 34567889999999999999988 9999999877
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+. .||+.+| |.+|+.+++... .+|.....+.|++||++|+.|||.++|||||||..|||+.+++
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~------------- 525 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL------------- 525 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC-------------
Confidence 66 9999999 889999998665 4799999999999999999999999999999999999997766
Q ss_pred CCCCCccccCCCCCCeeEeecCCccccc-----CCCcccccCCCccccceecCC---CCCccchhHHHHHHHHHHHhCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEH-----QDHSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~ 316 (411)
.|||+|||++.... .......|...|||||++..+ +|++.+|||||||++|||++|..
T Consensus 526 --------------kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~l 591 (678)
T KOG0193|consen 526 --------------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGEL 591 (678)
T ss_pred --------------cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcC
Confidence 67788888775432 222335688899999999743 79999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh----cCC-CCcccccCCCC
Q 015222 317 LFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK----LLR-LPVIDLYSASP 390 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~----~~~-~~~~~~~~~~~ 390 (411)
||......+++.++-++.. +.......+.++++++++..|+.++ +++||.+.+|+. ++. ++.+.-....|
T Consensus 592 Pysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~----~~eRP~F~~il~~l~~l~~~~pki~RS~S~P 667 (678)
T KOG0193|consen 592 PYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFD----REERPLFPQLLSKLEELLPSLPKINRSASEP 667 (678)
T ss_pred CcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcC----cccCccHHHHHHHHHHhhhcccccccCcCcc
Confidence 9997666666665555422 3334445566778888888887777 666666666655 443 45555444455
Q ss_pred Cch
Q 015222 391 NCL 393 (411)
Q Consensus 391 ~~~ 393 (411)
+.+
T Consensus 668 ~~~ 670 (678)
T KOG0193|consen 668 VLL 670 (678)
T ss_pred chh
Confidence 443
No 169
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=6.7e-42 Score=329.64 Aligned_cols=264 Identities=26% Similarity=0.460 Sum_probs=216.4
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.++++++|+|+ +++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----v~~~~~~~~~ 88 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPA 88 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcc-----cceeeeeeec
Confidence 35678999999999999999999999999999999987432 234567789999999988887 8888877532
Q ss_pred ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 166 ------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
+..|+++++++++|.+++... .+++..++.++.||+.||+|||++||+||||||+||+++.++
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~-------- 157 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC-------- 157 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC--------
Confidence 457899999999999888654 489999999999999999999999999999999999998766
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.++|+|||++...........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||
T Consensus 158 -------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf 218 (345)
T cd07877 158 -------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 218 (345)
T ss_pred -------------------CEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 5778888877765554455678999999999876 46889999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHH---------------------------hhhhhhhhhhccCCccCCCCCCCcHHHH
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVI---------------------------RADRRAEKYFRRGARLDWPDGATSRDSM 371 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~---------------------------~~~~~~~~li~~~l~~~~~~rp~~R~t~ 371 (411)
...+....+..+....+..+..... ..+..+.++|.+||..+ |.+|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d----p~~R~t~ 294 (345)
T cd07877 219 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD----SDKRITA 294 (345)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCC----hhhcCCH
Confidence 8877666655555544333222211 23556789999999999 9999999
Q ss_pred HHHHhcCCCCcccccCCCCC
Q 015222 372 RAVWKLLRLPVIDLYSASPN 391 (411)
Q Consensus 372 ~~il~~~~~~~~~~~~~~~~ 391 (411)
.+++.|+||.+...+...|.
T Consensus 295 ~e~l~h~~f~~~~~~~~~~~ 314 (345)
T cd07877 295 AQALAHAYFAQYHDPDDEPV 314 (345)
T ss_pred HHHhcChhhhhcCCCCcccc
Confidence 99999999998777776664
No 170
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-42 Score=323.39 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=205.0
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||+|+||+||+|.+..+++.||+|++.... .....+..|+.++++++|+++ +++++.+...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFI-----VSLAYAFETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCE-----eeeeeEEecCCeEEEEEecC
Confidence 699999999999999999999999986422 233455689999999987766 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.+.....+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~----------------------- 132 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG----------------------- 132 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------------------
Confidence 89999999876545799999999999999999999999999999999999998766
Q ss_pred CCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMER 332 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~ 332 (411)
.++|+|||.+...... .....++..|+|||++.+..++.++|||||||++|+|++|+.||...........+..
T Consensus 133 ----~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 208 (277)
T cd05577 133 ----NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKR 208 (277)
T ss_pred ----CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHh
Confidence 5677777766543221 1234678899999999888899999999999999999999999977554222222222
Q ss_pred HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-HHHHHHhcCCCCcccccC
Q 015222 333 VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-t~~~il~~~~~~~~~~~~ 387 (411)
.....+.......+..+.++|.+||..+|.+||+.+. ++.++++|+||.++++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~ 264 (277)
T cd05577 209 RTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR 264 (277)
T ss_pred ccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence 2222233333456788999999999999555555554 999999999999888643
No 171
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.2e-43 Score=323.28 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=202.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
++|++.+.||+|+||.||+|++..+++.||+|+++... .....+.+|+.+++.+.|+++ +++++.+...+..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----i~~~~~~~~~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI-----VAYFGSYLRRDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEeCCEEEE
Confidence 57999999999999999999999999999999987543 233457789999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++...+ .+++..+..++.|++.||+|||+.||+|+||||+||+++.++
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~------------------ 143 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG------------------ 143 (267)
T ss_pred EEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC------------------
Confidence 99999 889999987765 699999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++...... .....|+..|+|||++. +..++.++|||||||++|+|++|..||.....
T Consensus 144 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~ 214 (267)
T cd06645 144 ---------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP 214 (267)
T ss_pred ---------CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence 4666666665433221 12346899999999975 44688999999999999999999999976554
Q ss_pred HHHHHHHHHHhCCCCh-hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 324 LEHLAMMERVLGPLPH-HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~-~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
......+.......+. .....++..+.+++.+||..+ |.+||++.++++|+|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~~~~~ll~~~~ 267 (267)
T cd06645 215 MRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN----PKKRPTAEKLLQHPF 267 (267)
T ss_pred hhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC----chhCcCHHHHhcCCC
Confidence 4433333222111111 111235667889999999998 999999999999998
No 172
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.8e-42 Score=329.81 Aligned_cols=261 Identities=27% Similarity=0.460 Sum_probs=215.0
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
+.++|++.+.||+|+||.||+|.+..++..||||++... ......+.+|+.+++++.|+|+ +++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~ 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV-----IGLLDVFTPDL 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc-----cceeeeecCCc
Confidence 567899999999999999999999999999999998642 2234567789999999998887 89988886543
Q ss_pred ------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 167 ------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 167 ------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
.+++||||++++|.+++... .+++..++.++.||+.||+|||+.||+||||||+||+++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~--------- 155 (343)
T cd07880 88 SLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC--------- 155 (343)
T ss_pred cccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC---------
Confidence 46999999988999888753 599999999999999999999999999999999999997765
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.++|+|||++...........+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.
T Consensus 156 ------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 156 ------------------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred ------------------CEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 57888888877655544555788999999998763 68899999999999999999999998
Q ss_pred CCChHHHHHHHHHHhCCCChhH---------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 320 THENLEHLAMMERVLGPLPHHM---------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~---------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
+.+.......+.+.....+..+ ....+..+.++|.+||+.+ |.+|||+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----P~~R~t~~ 293 (343)
T cd07880 218 GHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLD----AESRITAA 293 (343)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCC----hhhCCCHH
Confidence 8776655555544433332221 1234566889999999999 99999999
Q ss_pred HHHhcCCCCcccccCCC
Q 015222 373 AVWKLLRLPVIDLYSAS 389 (411)
Q Consensus 373 ~il~~~~~~~~~~~~~~ 389 (411)
+++.|+||+........
T Consensus 294 ~~l~~~~~~~~~~~~~~ 310 (343)
T cd07880 294 EALAHPYFEEFHDPEDE 310 (343)
T ss_pred HHhcCccHhhhcCcccc
Confidence 99999999987655433
No 173
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-42 Score=322.01 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=202.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.++|++.+.||+|+||.||+|++..+++.||+|++.... .....+.+|+.+++++.|+++ +++++++..++..+
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----i~~~~~~~~~~~~~ 82 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI-----VAYFGSYLSREKLW 82 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCe-----eeeeEEEEeCCEEE
Confidence 457999999999999999999999999999999987432 334567789999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++
T Consensus 83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~----------------- 143 (267)
T cd06646 83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG----------------- 143 (267)
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC-----------------
Confidence 999999 889999987654 689999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||++...... .....|+..|+|||.+. ...++.++|||||||++|||++|..||....
T Consensus 144 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~ 213 (267)
T cd06646 144 ----------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred ----------CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 4677777766543221 22346889999999985 3357889999999999999999999997554
Q ss_pred hHHHHHHHHHHhCCCCh-hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 323 NLEHLAMMERVLGPLPH-HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~-~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
..+....+.......+. .....++..+.+++++||..+ |++||+++++++|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rp~~~~il~~l~ 267 (267)
T cd06646 214 PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKN----PKKRPTAERLLTHLF 267 (267)
T ss_pred hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCC----hhhCcCHHHHhcCCC
Confidence 43333222221111111 111245678999999999888 999999999999987
No 174
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.5e-42 Score=321.13 Aligned_cols=253 Identities=21% Similarity=0.319 Sum_probs=196.8
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
.||+|+||.||++.+..+++.||+|.+.+.. .......+|..+++.+.+. .|++++.+++.+..++..++||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC--CCCcEeEEEEEEecCCeEEEEEec
Confidence 4899999999999999999999999986432 1122334455555544322 346669999999999999999999
Q ss_pred C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcccc
Q 015222 175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253 (411)
Q Consensus 175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~ 253 (411)
+ +++|.+++..+. .+++..+..++.|++.||+|||++||+|+||||+|||++.++
T Consensus 79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~---------------------- 134 (279)
T cd05633 79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG---------------------- 134 (279)
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC----------------------
Confidence 9 999999988765 699999999999999999999999999999999999997766
Q ss_pred CCCCCCeeEeecCCcccccC-CCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 254 LPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 254 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||++..... ......||..|+|||.+.+ ..++.++|||||||++|+|++|..||........ ..+.
T Consensus 135 -----~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~ 208 (279)
T cd05633 135 -----HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEID 208 (279)
T ss_pred -----CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHH
Confidence 567777776653322 1223468999999999874 4689999999999999999999999976433221 1122
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~ 387 (411)
......+.......+..+.++|.+||..| |++|+ +++++++|+||.++.+..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~R~~~~~~~~~~~~~h~~~~~~~~~~ 265 (279)
T cd05633 209 RMTLTVNVELPDSFSPELKSLLEGLLQRD----VSKRLGCLGRGAQEVKEHVFFKGIDWQQ 265 (279)
T ss_pred HHhhcCCcCCccccCHHHHHHHHHHhcCC----HHHhcCCCCCCHHHHHhCccccCCCHhH
Confidence 22222333344556788999999999999 88888 699999999999977544
No 175
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.4e-42 Score=321.84 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=211.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|+|+ +++++++..+...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYI-----TKYYGSFLKGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCe-----eeeeEEEEECCeEE
Confidence 47899999999999999999999999999999987432 334567889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+|+||+ +++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||++++++
T Consensus 76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~----------------- 135 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG----------------- 135 (274)
T ss_pred EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC-----------------
Confidence 999999 88999998865 589999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|||||||++|+|++|..||...+...
T Consensus 136 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~ 205 (274)
T cd06609 136 ----------DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR 205 (274)
T ss_pred ----------CEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH
Confidence 5677777776654332 233578889999999998889999999999999999999999998766555
Q ss_pred HHHHHHHHhCCCChhHHHh-hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~-~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
....+.....+ ..... .+..+.+++.+|+..+ |.+||+++++++|+||.+....
T Consensus 206 ~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~----p~~Rpt~~~il~~~~~~~~~~~ 260 (274)
T cd06609 206 VLFLIPKNNPP---SLEGNKFSKPFKDFVSLCLNKD----PKERPSAKELLKHKFIKKAKKT 260 (274)
T ss_pred HHHHhhhcCCC---CCcccccCHHHHHHHHHHhhCC----hhhCcCHHHHhhChhhcCCCcc
Confidence 54444433221 11122 6677899999998888 9999999999999999885543
No 176
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=8.8e-42 Score=314.60 Aligned_cols=249 Identities=27% Similarity=0.383 Sum_probs=209.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++++.||.|+||.||.+++..+++.|++|.+... ......+.+|+.++++++|+|+ +++++++.+.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-----IAYYNHFMDDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe-----eEEEeEEecCCeEE
Confidence 599999999999999999999999999999988642 3445667889999999988776 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||+ +++|.+++.+.....+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~----------------- 138 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG----------------- 138 (256)
T ss_pred EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC-----------------
Confidence 999999 89999999876445789999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||.+....... ....|++.|+|||++.+..++.++||||||+++|+|++|..||...+..+
T Consensus 139 ----------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08221 139 ----------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN 208 (256)
T ss_pred ----------CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 45666666655432222 23568899999999998889999999999999999999999998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.... .+. .....+..+.+++.+|+..+ |..||++.++++|+|+
T Consensus 209 ~~~~~~~~~--~~~-~~~~~~~~~~~~i~~~l~~~----p~~R~s~~~ll~~~~l 256 (256)
T cd08221 209 LVVKIVQGN--YTP-VVSVYSSELISLVHSLLQQD----PEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHcCC--CCC-CccccCHHHHHHHHHHcccC----cccCCCHHHHhhCcCC
Confidence 666554322 221 12456778899999998888 9999999999999986
No 177
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-42 Score=324.68 Aligned_cols=255 Identities=25% Similarity=0.400 Sum_probs=209.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
++|++.+.||.|+||.||+|.+..++..||+|++.... ...+.+..|+.++++++|+++ +++++.+..++..|+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l 79 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNI-----VGLYEAYFYENKLWI 79 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEEecCCeEEE
Confidence 57999999999999999999999899999999987433 344567889999999988777 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.+.. ..+++..++.++.|++.||.|||++||+|+||||+||+++.++
T Consensus 80 v~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~------------------ 140 (280)
T cd06611 80 LIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG------------------ 140 (280)
T ss_pred EeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC------------------
Confidence 99999 889999987654 3699999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+...... .....|++.|+|||++. +..++.++|||||||++|+|++|+.||...
T Consensus 141 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 141 ---------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred ---------CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 5677777765543221 23346899999999985 335788999999999999999999999887
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
+..+.+..+.....+ .......++..+.+++.+|+..+ |.+||++.++++|+|+.+..
T Consensus 212 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~~~~~~~~ 269 (280)
T cd06611 212 NPMRVLLKILKSEPP-TLDQPSKWSSSFNDFLKSCLVKD----PDDRPTAAELLKHPFVSDQS 269 (280)
T ss_pred CHHHHHHHHhcCCCC-CcCCcccCCHHHHHHHHHHhccC----hhhCcCHHHHhcChhhcccc
Confidence 665555444432211 11112345678899999998888 99999999999999998763
No 178
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.8e-42 Score=320.68 Aligned_cols=256 Identities=22% Similarity=0.374 Sum_probs=203.6
Q ss_pred CccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee---
Q 015222 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD--- 163 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~--- 163 (411)
....++|++.+.||+|+||.||+|.+..+++.||+|++.........+.+|+.+++.+ .|+|+ +++++++.
T Consensus 14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~~ 88 (286)
T cd06638 14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNV-----VKFYGMYYKKD 88 (286)
T ss_pred CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCe-----eeeeeeeeecc
Confidence 3456799999999999999999999999999999999876555556678899999999 47766 99998873
Q ss_pred --cCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 015222 164 --YRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238 (411)
Q Consensus 164 --~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df 238 (411)
.++..++||||+ +++|.+++... ....+++..+..++.|++.||.|||+.+|+||||||+||+++.++
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~------- 161 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEG------- 161 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCC-------
Confidence 356799999999 99999987632 224689999999999999999999999999999999999998766
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-----CCCCccchhHHHHHHHHH
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVE 310 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~e 310 (411)
.++|+|||++...... .....|+..|+|||++.. ..++.++|||||||++||
T Consensus 162 --------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e 221 (286)
T cd06638 162 --------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE 221 (286)
T ss_pred --------------------CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence 4677777776543221 223468999999999853 357899999999999999
Q ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 311 LCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 311 lltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
|++|+.||...+....+..+..... .........+..+.+++.+|+..+ |++||++.++++|+||
T Consensus 222 l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~ell~~~~~ 286 (286)
T cd06638 222 LGDGDPPLADLHPMRALFKIPRNPP-PTLHQPELWSNEFNDFIRKCLTKD----YEKRPTVSDLLQHVFI 286 (286)
T ss_pred HhcCCCCCCCCchhHHHhhccccCC-CcccCCCCcCHHHHHHHHHHccCC----cccCCCHHHHhhcccC
Confidence 9999999987655444333322211 111111224567899999998888 9999999999999997
No 179
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.4e-42 Score=319.35 Aligned_cols=247 Identities=26% Similarity=0.400 Sum_probs=202.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~ 162 (411)
+|.+.+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++++.|+++ +++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~ 75 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI-----VQYLGSS 75 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEE
Confidence 4788899999999999999999999999999886422 122567789999999988877 9999999
Q ss_pred ecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
...+..++||||+ +++|.+++.... .+++..+..++.|++.||+|||+.|++||||||+||++++++.
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~--------- 144 (267)
T cd06628 76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGG--------- 144 (267)
T ss_pred EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCC---------
Confidence 9999999999999 889999998764 6899999999999999999999999999999999999987774
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccC---------CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
++|+|||.+..... ......|+..|+|||.+.+..++.++|||||||++|+|+
T Consensus 145 ------------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~ 206 (267)
T cd06628 145 ------------------IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML 206 (267)
T ss_pred ------------------EEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHh
Confidence 45555554443321 112245788999999999888999999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+|+.||.+.+....+..+.. ..........+..+.++|.+|+..+ |.+||++.++++|+||
T Consensus 207 ~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 207 TGKHPFPDCTQLQAIFKIGE---NASPEIPSNISSEAIDFLEKTFEID----HNKRPTAAELLKHPFL 267 (267)
T ss_pred hCCCCCCCccHHHHHHHHhc---cCCCcCCcccCHHHHHHHHHHccCC----chhCcCHHHHhhCCCC
Confidence 99999987655444433332 1122223346778899999998888 9999999999999997
No 180
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1e-41 Score=318.64 Aligned_cols=249 Identities=30% Similarity=0.485 Sum_probs=203.6
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecC--CeE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR--NHI 168 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~--~~~ 168 (411)
|++.++||+|+||.||+|.+..+++.||+|+++... .......+|+.++.++. |+|+ +++++++.+. +.+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNI-----LRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCc-----cceEEEEecCCCCcE
Confidence 688999999999999999999999999999987532 22233456888888875 6666 9999999887 899
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++||||+.++|.+++.... ..+++..+..++.||+.||+|||+.||+||||||+||+++. +
T Consensus 76 ~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~----------------- 136 (282)
T cd07831 76 ALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D----------------- 136 (282)
T ss_pred EEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C-----------------
Confidence 9999999779999887643 36899999999999999999999999999999999999976 5
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+
T Consensus 137 ----------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~ 206 (282)
T cd07831 137 ----------ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD 206 (282)
T ss_pred ----------CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH
Confidence 57778887776543222 23467889999997754 457899999999999999999999999887777
Q ss_pred HHHHHHHHhCCCChh-------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHH-------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~-------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+....+..+.. .....+..+.++|.+||+.+ |.+||++.++++|+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 207 QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYD----PDERITAKQALRHPYF 282 (282)
T ss_pred HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccC----cccccCHHHHhhCCCC
Confidence 666665544433321 12245678999999999999 9999999999999997
No 181
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.4e-42 Score=317.08 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=208.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... .+.+.+|+.++++++|+++ +++++++......|++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYI-----VKYYGSYFKNTDLWIV 76 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcE-----eeeeeeeecCCcEEEE
Confidence 579999999999999999999999899999999976543 6778899999999977776 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++
T Consensus 77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~------------------- 136 (256)
T cd06612 77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG------------------- 136 (256)
T ss_pred EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC-------------------
Confidence 9999 889999987644 4689999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~ 327 (411)
.++|+|||++....... ....|+..|+|||++.+..++.++|||||||++|+|++|+.||...+.....
T Consensus 137 --------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~ 208 (256)
T cd06612 137 --------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI 208 (256)
T ss_pred --------cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh
Confidence 56777777666543222 2345788999999999889999999999999999999999999876554443
Q ss_pred HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 328 ~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..+.... .........++..+.+++.+|+..+ |.+||++.++++|+||
T Consensus 209 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~----P~~Rps~~~il~~~~~ 256 (256)
T cd06612 209 FMIPNKP-PPTLSDPEKWSPEFNDFVKKCLVKD----PEERPSAIQLLQHPFI 256 (256)
T ss_pred hhhccCC-CCCCCchhhcCHHHHHHHHHHHhcC----hhhCcCHHHHhcCCCC
Confidence 3322211 1111123345678899999998888 9999999999999997
No 182
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.7e-42 Score=321.94 Aligned_cols=254 Identities=25% Similarity=0.417 Sum_probs=207.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc-hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
-|++.+.||+|+||.||+|.+..++..+|+|.+... ....+.+.+|+.+++.+.|+|+ +++++++..++..++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-----VKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCe-----eeEEEEEeeCCEEEEE
Confidence 378899999999999999999999999999998643 3445667889999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|..++.+.. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++
T Consensus 81 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~------------------- 140 (282)
T cd06643 81 IEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG------------------- 140 (282)
T ss_pred EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC-------------------
Confidence 9999 889988876533 3699999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||++...... .....|+..|+|||++. +..++.++|||||||++|+|++|+.||...+
T Consensus 141 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 212 (282)
T cd06643 141 --------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN 212 (282)
T ss_pred --------CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence 5666666665443221 22346889999999984 3457889999999999999999999998877
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
..+....+....... ......++..+.++|.+|++.+ |.+||++.++++|+|+....
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 213 PMRVLLKIAKSEPPT-LAQPSRWSSEFKDFLKKCLEKN----VDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred HHHHHHHHhhcCCCC-CCCccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCCCEeccC
Confidence 666555554432211 1112346678999999998888 99999999999999998643
No 183
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-43 Score=286.99 Aligned_cols=255 Identities=28% Similarity=0.461 Sum_probs=220.5
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|.-.++||+|.||+||+|+++++++.||+|.++... .......+|+-+|+.++|.|| |++++....++.+-
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkni-----vrl~dvlhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcce-----eehhhhhccCceeE
Confidence 5777899999999999999999999999999997433 344678899999999999988 99999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+|+|||..+|..+...-. ..++.+.++.++.|+++||.|+|++++.|||+||.|+||+.+|
T Consensus 78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng------------------ 138 (292)
T KOG0662|consen 78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG------------------ 138 (292)
T ss_pred EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC------------------
Confidence 999999999999988765 4699999999999999999999999999999999999998877
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.+||+|||+++..+-.. +..+-|..|++|.++.|. -|++..|+||.|||+.|+.. |++.|.+.+..
T Consensus 139 ---------elkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd 209 (292)
T KOG0662|consen 139 ---------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209 (292)
T ss_pred ---------cEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence 67778888777655443 224668999999999887 58999999999999999998 99999999999
Q ss_pred HHHHHHHHHhCCCChhHH-------------------------HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 325 EHLAMMERVLGPLPHHMV-------------------------IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~-------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
+++..|.+..+...++.+ +.++..-+++++++|..+ |..|.+++++++||+
T Consensus 210 dqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cn----p~qrisaeaalqhpy 285 (292)
T KOG0662|consen 210 DQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCN----PAQRISAEAALQHPY 285 (292)
T ss_pred HHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccC----cccccCHHHHhcCcc
Confidence 999999988875443322 234455678999999888 999999999999999
Q ss_pred CCccc
Q 015222 380 LPVID 384 (411)
Q Consensus 380 ~~~~~ 384 (411)
|.+..
T Consensus 286 f~d~s 290 (292)
T KOG0662|consen 286 FSDFS 290 (292)
T ss_pred ccccC
Confidence 98764
No 184
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-42 Score=322.58 Aligned_cols=238 Identities=13% Similarity=0.162 Sum_probs=196.6
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchhh----hHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec----CCeEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHIC 169 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----~~~~~ 169 (411)
..||+|++|.||+|.. +|+.||||+++..... .+.+.+|+.++++++|+|| +++++++.+ ...++
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~~~g~~~~~~~~~~~~~ 98 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNI-----LKIYGFIIDIVDDLPRLS 98 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCE-----EEEeeeEEecccCCCceE
Confidence 5789999999999976 6889999999754332 3566799999999998877 999998876 35789
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+||||+ +|+|.+++.... .+++.....++.|++.||.|||+ .+++||||||+|||++.++
T Consensus 99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~---------------- 160 (283)
T PHA02988 99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY---------------- 160 (283)
T ss_pred EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC----------------
Confidence 999999 999999998764 68999999999999999999998 4999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC--CCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG--LGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.+||+|||++...........||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+
T Consensus 161 -----------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~ 229 (283)
T PHA02988 161 -----------KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE 229 (283)
T ss_pred -----------cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH
Confidence 5777888877654444444578999999999976 579999999999999999999999999887766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
....+......++ .....+..+.+++.+|++.+ |..||++.++++.
T Consensus 230 ~~~~i~~~~~~~~--~~~~~~~~l~~li~~cl~~d----p~~Rps~~ell~~ 275 (283)
T PHA02988 230 IYDLIINKNNSLK--LPLDCPLEIKCIVEACTSHD----SIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHhcCCCCC--CCCcCcHHHHHHHHHHhcCC----cccCcCHHHHHHH
Confidence 6665543322222 22245778999999998888 9999999999864
No 185
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.2e-42 Score=314.47 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=209.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||++.+..+++.||+|.+... ......+.+|+.+++++.|+++ +++++++...++.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-----VQYQESFEENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-----eeeEeeecCCCeEE
Confidence 599999999999999999999999999999998642 2344577889999999988777 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++.++
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~----------------- 138 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG----------------- 138 (256)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-----------------
Confidence 999999 89999999875545689999999999999999999999999999999999997765
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 139 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~ 208 (256)
T cd08218 139 ----------TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN 208 (256)
T ss_pred ----------CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH
Confidence 56777777766543322 22467889999999998889999999999999999999999998777666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.... .+. .....+..+.++|.+|++.+ |++||++.++++|+||
T Consensus 209 ~~~~~~~~~--~~~-~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 209 LVLKIIRGS--YPP-VSSHYSYDLRNLVSQLFKRN----PRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHHhcCC--CCC-CcccCCHHHHHHHHHHhhCC----hhhCcCHHHHhhCcCC
Confidence 555543322 211 22345677899999998888 9999999999999997
No 186
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-41 Score=314.16 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=207.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
++|++.+.||.|+||.||+|.+..+++.+|+|++.... ...+.+.+|+.++++++|+++ +++++.+.+++.+|+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI-----VAYFGSYLRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCCh-----hceEEEEEeCCEEEE
Confidence 57999999999999999999999999999999987533 345678899999999988887 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+|||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++
T Consensus 78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~------------------ 138 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG------------------ 138 (262)
T ss_pred EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC------------------
Confidence 99999 889999987752 3699999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC---CCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||.+...... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+.
T Consensus 139 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~ 209 (262)
T cd06613 139 ---------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP 209 (262)
T ss_pred ---------CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 5677777766543321 2334688899999999877 789999999999999999999999988766
Q ss_pred HHHHHHHHHHhCCC-ChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 324 LEHLAMMERVLGPL-PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 324 ~~~~~~i~~~~~~~-p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
.+....+....... ........+..+.+++.+|+..+ |..||++.+++.|+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~il~~~~ 262 (262)
T cd06613 210 MRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKD----PKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCC----hhhCCCHHHHhcCCC
Confidence 55544443331111 11122345677899999998888 999999999999998
No 187
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1e-41 Score=319.60 Aligned_cols=252 Identities=32% Similarity=0.614 Sum_probs=206.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.+.||+|+||.||+|.+..+++.||+|+++.. ....+.+.+|+++++++.|+++ +++++++..++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-----VNLKEAFRRKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-----eehhheEEECCEE
Confidence 4799999999999999999999999999999998643 2345678899999999988877 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++||||+++++.+.+.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++
T Consensus 76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~----------------- 137 (288)
T cd07833 76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG----------------- 137 (288)
T ss_pred EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC-----------------
Confidence 9999999545554444333 3589999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||.+....... ....++..|+|||++.+. .++.++||||||+++|+|++|+.||.+.+.
T Consensus 138 ----------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 138 ----------VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred ----------CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 57777777766543322 234678899999999888 889999999999999999999999988777
Q ss_pred HHHHHHHHHHhCCCChhH----------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHH
Q 015222 324 LEHLAMMERVLGPLPHHM----------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~----------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il 375 (411)
.+.+..+....+.++... ...++..+.+++.+|+..+ |++||++++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il 283 (288)
T cd07833 208 IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD----PKERLTCDELL 283 (288)
T ss_pred HHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC----chhcccHHHHh
Confidence 666655555443332211 1112677889999998888 99999999999
Q ss_pred hcCCC
Q 015222 376 KLLRL 380 (411)
Q Consensus 376 ~~~~~ 380 (411)
+|+||
T Consensus 284 ~~~~f 288 (288)
T cd07833 284 QHPYF 288 (288)
T ss_pred cCCCC
Confidence 99997
No 188
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=345.78 Aligned_cols=251 Identities=27% Similarity=0.358 Sum_probs=204.3
Q ss_pred eEEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc-chhhhHHHHHHHHHHHHHh-cCCCCCcceEEEe
Q 015222 82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLA-RHDIGGTRCVQIR 159 (411)
Q Consensus 82 ~~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~ 159 (411)
..+.+|. -+++|.+.|.+|||+.||+|++...+..||+|.+-. +....+.+.+|+++|+.|. |+|| |.++
T Consensus 30 ~~~~Vg~---~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nI-----V~yi 101 (738)
T KOG1989|consen 30 QTFTVGS---HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNI-----VSYI 101 (738)
T ss_pred eEEEECC---EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCce-----eeEe
Confidence 3445554 378999999999999999999999889999998853 4456678889999999997 5555 9999
Q ss_pred ee-eec------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEec
Q 015222 160 NW-FDY------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVS 229 (411)
Q Consensus 160 ~~-~~~------~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dikp~NIli~~ 229 (411)
+. ... .-.++|.|||| ||+|.|++..+....|++.++++|+.|+++|+.+||..+ |||||||-|||||+.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 93 221 13689999999 799999999776667999999999999999999999998 999999999999988
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCc------------ccccCCCccccceec---CCC
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------------YVVSTRHYRAPEVIL---GLG 294 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~gt~~y~aPE~~~---~~~ 294 (411)
+| ..||||||++........ ....|+.|+|||++. +.+
T Consensus 182 ~g---------------------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p 234 (738)
T KOG1989|consen 182 DG---------------------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP 234 (738)
T ss_pred CC---------------------------CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC
Confidence 77 678888998765332221 134699999999974 568
Q ss_pred CCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHH
Q 015222 295 WNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374 (411)
Q Consensus 295 ~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~i 374 (411)
++.|+|||+|||+||-|+....||++... ..|......+|.. +.++..+++||+.||+.+ |.+||++-++
T Consensus 235 I~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~n----P~~RPnI~Qv 304 (738)
T KOG1989|consen 235 IGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF--PNYSDRLKDLIRTMLQPN----PDERPNIYQV 304 (738)
T ss_pred CcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC--ccHHHHHHHHHHHHhccC----cccCCCHHHH
Confidence 99999999999999999999999986544 2344555666664 567889999999999999 6666666666
Q ss_pred Hhc
Q 015222 375 WKL 377 (411)
Q Consensus 375 l~~ 377 (411)
+.+
T Consensus 305 ~~~ 307 (738)
T KOG1989|consen 305 LEE 307 (738)
T ss_pred HHH
Confidence 654
No 189
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.1e-42 Score=318.46 Aligned_cols=253 Identities=24% Similarity=0.381 Sum_probs=205.1
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecC----
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR---- 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~---- 165 (411)
.++|++.+.||+|+||.||+|.++.+++.|++|++.......+.+.+|+.+++++ .|+|+ +++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNI-----ATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCCh-----heEEEEEEecCCCC
Confidence 4789999999999999999999999999999999987666667788999999998 57776 9999998653
Q ss_pred --CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 --NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 --~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
..+++||||+ +++|.+++.... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~--------- 150 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA--------- 150 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC---------
Confidence 4589999999 889999987533 34789999999999999999999999999999999999998766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecC-----CCCCccchhHHHHHHHHHHH
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILG-----LGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwSlGvil~ell 312 (411)
.++|+|||.+...... .....|+..|+|||++.. ..++.++|||||||++|+|+
T Consensus 151 ------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~ 212 (275)
T cd06608 151 ------------------EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA 212 (275)
T ss_pred ------------------eEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence 5667777766543221 123468899999998854 24678999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+|+.||........+..+...... .......++..+.+++.+||..| |++|||+.++++|||+
T Consensus 213 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~d----p~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 213 DGKPPLCDMHPMRALFKIPRNPPP-TLKSPENWSKKFNDFISECLIKN----YEQRPFMEELLEHPFI 275 (275)
T ss_pred hCCCCccccchHHHHHHhhccCCC-CCCchhhcCHHHHHHHHHHhhcC----hhhCcCHHHHhcCCCC
Confidence 999999876555444444332111 11112235678999999999999 9999999999999996
No 190
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=7e-42 Score=321.89 Aligned_cols=252 Identities=28% Similarity=0.434 Sum_probs=206.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--C
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--N 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~ 166 (411)
++|++.+.||.|+||.||+|.+..+++.||+|.++... .....+.+|+.+++++.|+|+ +++++++... +
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI-----VTVKEVVVGSNLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE-----EEEEEEEEecCCC
Confidence 47999999999999999999999999999999997432 223345689999999988777 9999988776 8
Q ss_pred eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+||+++.++
T Consensus 80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--------------- 143 (293)
T cd07843 80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--------------- 143 (293)
T ss_pred cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC---------------
Confidence 999999999779999987654 3689999999999999999999999999999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||.+...... .....++..|+|||.+.+. .++.++|||||||++|+|++|..||...+
T Consensus 144 ------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~ 211 (293)
T cd07843 144 ------------ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211 (293)
T ss_pred ------------cEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 5677777766654332 1234578899999998765 46899999999999999999999999887
Q ss_pred hHHHHHHHHHHhCCCChhHH--------------------------Hh--hhhhhhhhhccCCccCCCCCCCcHHHHHHH
Q 015222 323 NLEHLAMMERVLGPLPHHMV--------------------------IR--ADRRAEKYFRRGARLDWPDGATSRDSMRAV 374 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~--------------------------~~--~~~~~~~li~~~l~~~~~~rp~~R~t~~~i 374 (411)
..+.+..+....+......+ .. .++.+.++|.+||+.+ |++||++.|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~R~t~~el 287 (293)
T cd07843 212 EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYD----PAKRISAEDA 287 (293)
T ss_pred hHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccC----ccccCCHHHH
Confidence 77666665544332211111 11 3667889999999988 9999999999
Q ss_pred HhcCCC
Q 015222 375 WKLLRL 380 (411)
Q Consensus 375 l~~~~~ 380 (411)
++|+||
T Consensus 288 l~~~~f 293 (293)
T cd07843 288 LKHPYF 293 (293)
T ss_pred hcCCCC
Confidence 999997
No 191
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.7e-42 Score=323.43 Aligned_cols=251 Identities=20% Similarity=0.291 Sum_probs=196.4
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC----------------CCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG 152 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~----------------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~ 152 (411)
.++|++.++||+|+||.||+|.+.. ++..||+|++... ......+.+|+.++.++.|+||
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-- 81 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI-- 81 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe--
Confidence 3689999999999999999998543 3457999998753 2345678899999999988777
Q ss_pred cceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 015222 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY-----------------RSFPIDLVRELGRQLLESVAFMHELR 214 (411)
Q Consensus 153 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~g 214 (411)
+++++++.+.+..++||||+ +++|.+++..... ..+++..+..++.||+.||.|||+.|
T Consensus 82 ---v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 82 ---IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred ---eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 99999999999999999999 9999999865321 24677889999999999999999999
Q ss_pred ceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccce
Q 015222 215 LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEV 289 (411)
Q Consensus 215 ivH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~ 289 (411)
|+||||||+|||++.++ .+||+|||++....... ....++..|+|||+
T Consensus 159 ivH~dlkp~Nill~~~~---------------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 211 (304)
T cd05096 159 FVHRDLATRNCLVGENL---------------------------TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWEC 211 (304)
T ss_pred ccccCcchhheEEcCCc---------------------------cEEECCCccceecccCceeEecCcCCCCccccCHHH
Confidence 99999999999998766 56666666665432211 12345778999999
Q ss_pred ecCCCCCccchhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhC----CCChhHHHhhhhhhhhhhccCCccCCCC
Q 015222 290 ILGLGWNYPCDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLG----PLPHHMVIRADRRAEKYFRRGARLDWPD 363 (411)
Q Consensus 290 ~~~~~~~~~~DiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~----~~p~~~~~~~~~~~~~li~~~l~~~~~~ 363 (411)
+.+..++.++|||||||++|||++ +..||.+.+..+.+..+..... .........++..+.+++.+|+..+
T Consensus 212 ~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--- 288 (304)
T cd05096 212 ILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRD--- 288 (304)
T ss_pred HhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCC---
Confidence 988899999999999999999987 6788987766665554433211 1111111234567889999998888
Q ss_pred CCCcHHHHHHHHhc
Q 015222 364 GATSRDSMRAVWKL 377 (411)
Q Consensus 364 rp~~R~t~~~il~~ 377 (411)
|.+||++.++.+.
T Consensus 289 -p~~RPs~~~i~~~ 301 (304)
T cd05096 289 -CRERPSFSDIHAF 301 (304)
T ss_pred -chhCcCHHHHHHH
Confidence 9999999999654
No 192
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-41 Score=317.67 Aligned_cols=252 Identities=29% Similarity=0.488 Sum_probs=206.1
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
+|++.++||.|++|.||+|++..+++.||||+++... .....+.+|+.++++++|+|+ +++++++.+.+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI-----VRLHDVIHTENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCE-----eeeeeeEeeCCcEEE
Confidence 5899999999999999999999999999999987533 234566789999999988877 999999999999999
Q ss_pred EEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+.++|.+++.... ...+++..+..++.||+.||+|||+.|++|+||||+||++++++
T Consensus 76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~------------------ 137 (284)
T cd07836 76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG------------------ 137 (284)
T ss_pred EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC------------------
Confidence 99999779999887543 23589999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+...... .....++..|+|||++.+. .++.++|||||||++|+|++|+.||.+.+..+
T Consensus 138 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~ 208 (284)
T cd07836 138 ---------ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED 208 (284)
T ss_pred ---------cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 5677777766543221 1224578899999998764 57899999999999999999999999877666
Q ss_pred HHHHHHHHhCCCCh-------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPH-------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~-------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.+....... .+.+..+..+.+++.+|++.+ |.+||++.++++|+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~~~~~~l~~~~f 284 (284)
T cd07836 209 QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLN----PELRISAHDALQHPWF 284 (284)
T ss_pred HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCC----cccCCCHHHHhcCCCC
Confidence 65554433221111 112345677889999999998 9999999999999997
No 193
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.6e-41 Score=319.11 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=204.3
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecC---
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR--- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~--- 165 (411)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++++ .|+|+ +++++++...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni-----~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNV-----VKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEEecccc
Confidence 45789999999999999999999999999999999976555556778899999988 56665 9999987643
Q ss_pred --CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 --NHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 --~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
+..++||||+ +++|.+++... ....+++..++.++.|++.||+|||+.||+|+||||+||+++.++
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~--------- 165 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG--------- 165 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC---------
Confidence 4689999999 89999988642 224689999999999999999999999999999999999997765
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-----CCCccchhHHHHHHHHHHH
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~ell 312 (411)
.++|+|||.+...... .....|+..|+|||++... .++.++|||||||++|||+
T Consensus 166 ------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~ 227 (291)
T cd06639 166 ------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELG 227 (291)
T ss_pred ------------------CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHh
Confidence 5677777776643321 2234688899999998653 3689999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
+|+.||...+....+..+.+.... ...........+.+++.+|+..+ |++||++.++++|+||+
T Consensus 228 ~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~----p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 228 DGDPPLFDMHPVKTLFKIPRNPPP-TLLHPEKWCRSFNHFISQCLIKD----FEARPSVTHLLEHPFIK 291 (291)
T ss_pred hCCCCCCCCcHHHHHHHHhcCCCC-CCCcccccCHHHHHHHHHHhhcC----hhhCcCHHHHhcCcccC
Confidence 999999877665554444332111 11112234567889999998888 99999999999999984
No 194
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9e-42 Score=319.73 Aligned_cols=251 Identities=29% Similarity=0.493 Sum_probs=203.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.++||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.++|+++ +++++++..++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-----VNLIEVFRRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-----hhHHHhcccCCeE
Confidence 46999999999999999999999999999999986432 234567789999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.++..... .+++..+..++.||+.||.|||+.||+|+||+|+||++++++
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~---------------- 137 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG---------------- 137 (286)
T ss_pred EEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC----------------
Confidence 9999999 767776655443 589999999999999999999999999999999999997766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++....... ....++..|+|||++.+. .++.++|||||||++|||++|+.||.+.+.
T Consensus 138 -----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~ 206 (286)
T cd07846 138 -----------VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD 206 (286)
T ss_pred -----------cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch
Confidence 56777777765432221 224678899999998764 578899999999999999999999987776
Q ss_pred HHHHHHHHHHhCCCChh---------------------------HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 324 LEHLAMMERVLGPLPHH---------------------------MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~---------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
.+....+....+.+... ..+.++..+.+++.+|+..+ |.+||++.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rp~~~~il~ 282 (286)
T cd07846 207 IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRID----PDDRPSSSQLLH 282 (286)
T ss_pred HHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCC----cccchhHHHHhc
Confidence 66555554433322211 11234567888999998888 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
|+||
T Consensus 283 ~~~~ 286 (286)
T cd07846 283 HEFF 286 (286)
T ss_pred CCCC
Confidence 9997
No 195
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=7.9e-42 Score=316.48 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=206.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||.|+||+||+|.+..++..||+|++.... .....+.+|+.+++.+.|+++ +++++.+...+..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-----VKYYTSFVVGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-----EEEEEEEeeCCEEE
Confidence 46999999999999999999999999999999986432 345678899999999988776 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+|||++ +++|.+++..... ..+++..+..++.||+.||.|||+.||+|+||||+||++++++
T Consensus 76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~---------------- 139 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG---------------- 139 (267)
T ss_pred EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC----------------
Confidence 999999 9999999986532 4689999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.++|+|||.+...... .....|+..|+|||++... .++.++|+|||||++|+|++|+.||.
T Consensus 140 -----------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~ 208 (267)
T cd06610 140 -----------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYS 208 (267)
T ss_pred -----------CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcc
Confidence 4566666655433221 1234688999999998877 78999999999999999999999998
Q ss_pred CCChHHHHHHHHHHhC-CCChhH-HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 320 THENLEHLAMMERVLG-PLPHHM-VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~-~~p~~~-~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..+............. ..+... ....+..+.+++.+|+..+ |++||++.++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 209 KYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKD----PSKRPTAEELLKHKFF 267 (267)
T ss_pred ccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCC----hhhCcCHHHHhhCCCC
Confidence 7666544444333211 111111 1245677899999998888 9999999999999997
No 196
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.6e-42 Score=317.18 Aligned_cols=257 Identities=24% Similarity=0.350 Sum_probs=201.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+|++.+.||+|+||.||+|.+ .+++.+|+|.++... .....+.+|++++++++|+|+ +++++++.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-----VQYLGTCLDD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-----eeEeeEeecC
Confidence 488899999999999999986 478889999886322 223557789999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+..++||||+ +++|.+++.+.. .+++..+..++.|++.||+|||+.||+|+||||+||++++++.++++|||+....
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 9999999999 999999998764 6899999999999999999999999999999999999988775544444433221
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
..... ............|+..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 153 ~~~~~------------------~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~ 214 (265)
T cd06631 153 AWVGL------------------HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL 214 (265)
T ss_pred hhccc------------------cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH
Confidence 11000 000001112246889999999999888999999999999999999999999876655
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.....+.......+ ......+..+.++|.+|+..+ |.+||++.++++|+||
T Consensus 215 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 215 AAMFYIGAHRGLMP-RLPDSFSAAAIDFVTSCLTRD----QHERPSALQLLRHDFL 265 (265)
T ss_pred HHHHHhhhccCCCC-CCCCCCCHHHHHHHHHHhcCC----cccCCCHHHHhcCCCC
Confidence 54444433322222 123346778899999999888 9999999999999997
No 197
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5e-42 Score=328.46 Aligned_cols=259 Identities=27% Similarity=0.428 Sum_probs=215.6
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC---
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--- 166 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~--- 166 (411)
+|++.+.||.|+||.||+|++..+++.||||++... ....+.+.+|+.+++.++|+++ +++++++...+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI-----IGLLDILRPPSPED 75 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcch-----hhhhhhhcccCccc
Confidence 689999999999999999999999999999998753 2345678889999999988877 99999887764
Q ss_pred --eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 167 --~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.+|+||||++++|.+++.... .+++..++.++.||+.||+|||+.||+|+||||+|||++.++
T Consensus 76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~------------- 140 (330)
T cd07834 76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC------------- 140 (330)
T ss_pred ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence 899999999879999987654 799999999999999999999999999999999999998776
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||.+...... .....++..|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus 141 --------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~p 206 (330)
T cd07834 141 --------------DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPL 206 (330)
T ss_pred --------------CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCC
Confidence 4566666655543322 2234678899999999988 889999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHH---------------------------HhhhhhhhhhhccCCccCCCCCCCcHHH
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMV---------------------------IRADRRAEKYFRRGARLDWPDGATSRDS 370 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~---------------------------~~~~~~~~~li~~~l~~~~~~rp~~R~t 370 (411)
|.+.+..+.+..+....+..+.... ...+..+.++|.+||+.+ |.+||+
T Consensus 207 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rpt 282 (330)
T cd07834 207 FPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD----PKKRIT 282 (330)
T ss_pred cCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC----hhhCCC
Confidence 9998887777776665554333221 124567889999999888 999999
Q ss_pred HHHHHhcCCCCcccccCCC
Q 015222 371 MRAVWKLLRLPVIDLYSAS 389 (411)
Q Consensus 371 ~~~il~~~~~~~~~~~~~~ 389 (411)
+.++++|+||.++..+...
T Consensus 283 ~~~ll~~~~~~~~~~~~~~ 301 (330)
T cd07834 283 ADEALAHPYLAQLHDPEDE 301 (330)
T ss_pred HHHHHhCccHHhhcccccC
Confidence 9999999999987776543
No 198
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.4e-42 Score=316.66 Aligned_cols=247 Identities=18% Similarity=0.275 Sum_probs=205.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
..|.+.++||+|+||.||+|.++.+++.||+|++.........+.+|+.+++++.|+++ +++++++..++.+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv 80 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFYII 80 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCCh-----hheEEEEcCCCCcEEE
Confidence 46999999999999999999999999999999998665556778899999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.......+++..+..++.|++.||+|||++|++||||||+||++++++
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~------------------- 141 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH------------------- 141 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC-------------------
Confidence 9999 89999999876555689999999999999999999999999999999999998776
Q ss_pred cccCCCCCCeeEeecCCcccccCCCc----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus 142 --------~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~ 213 (263)
T cd05052 142 --------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 213 (263)
T ss_pred --------cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 456666665554332211 1233567999999998899999999999999999998 999998877666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
....+... .........+..+.+++.+|+..+ |++||++.++++.
T Consensus 214 ~~~~~~~~---~~~~~~~~~~~~~~~li~~cl~~~----p~~Rp~~~~l~~~ 258 (263)
T cd05052 214 VYELLEKG---YRMERPEGCPPKVYELMRACWQWN----PSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHCC---CCCCCCCCCCHHHHHHHHHHccCC----cccCCCHHHHHHH
Confidence 55554432 122223456778999999998888 9999999999765
No 199
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-44 Score=337.43 Aligned_cols=243 Identities=23% Similarity=0.359 Sum_probs=197.5
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL- 175 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~- 175 (411)
++-||.|+.|.||+|+. .++.||||.++. .-..+++-|++|+|+|| +.+.+++.....+|||||||
T Consensus 129 LeWlGSGaQGAVF~Grl--~netVAVKKV~e------lkETdIKHLRkLkH~NI-----I~FkGVCtqsPcyCIiMEfCa 195 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRL--HNETVAVKKVRE------LKETDIKHLRKLKHPNI-----ITFKGVCTQSPCYCIIMEFCA 195 (904)
T ss_pred hhhhccCcccceeeeec--cCceehhHHHhh------hhhhhHHHHHhccCcce-----eeEeeeecCCceeEEeeeccc
Confidence 56799999999999965 477899998753 23347888999999988 99999999999999999999
Q ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCC
Q 015222 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLP 255 (411)
Q Consensus 176 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~ 255 (411)
.|.|...|+... .+.......+.++|+.|+.|||.+.|||||||.-||||..++
T Consensus 196 ~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d------------------------ 249 (904)
T KOG4721|consen 196 QGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD------------------------ 249 (904)
T ss_pred cccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc------------------------
Confidence 999999999876 789999999999999999999999999999999999998766
Q ss_pred CCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Q 015222 256 KSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERV 333 (411)
Q Consensus 256 ~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~ 333 (411)
.|||+|||.++..... .-.++||..|||||++.+.+.+.|+|||||||||||||||..||.+-+...++.-+-..
T Consensus 250 ---~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsN 326 (904)
T KOG4721|consen 250 ---VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSN 326 (904)
T ss_pred ---eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCC
Confidence 6899999988765443 23479999999999999999999999999999999999999999876554443322211
Q ss_pred hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 334 LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
...+ .....+++-++-++++| |...|..||++++++.|+-+..-++.+
T Consensus 327 sL~L--pvPstcP~GfklL~Kqc----w~sKpRNRPSFrqil~HldIa~pell~ 374 (904)
T KOG4721|consen 327 SLHL--PVPSTCPDGFKLLLKQC----WNSKPRNRPSFRQILLHLDIASPELLS 374 (904)
T ss_pred cccc--cCcccCchHHHHHHHHH----HhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence 1111 11223444555555554 777799999999999998776554433
No 200
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.9e-41 Score=314.19 Aligned_cols=249 Identities=27% Similarity=0.434 Sum_probs=199.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY- 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~- 164 (411)
.+|++.+.||+|+||.||+|.+..+++.||||.+.... ...+.+.+|+.+++++.|+++ +++++++.+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERI-----VQYYGCLRDP 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCe-----eeEEeEeccC
Confidence 46999999999999999999999999999999885321 234567789999999988877 999998866
Q ss_pred -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
...+++||||+ +++|.+++.+.. .+++..+..++.|++.||+|||++||+|+||||+||+++.++.
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~---------- 144 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGN---------- 144 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCC----------
Confidence 35788999999 899999998764 5899999999999999999999999999999999999987774
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccC------CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
++|+|||.+..... ......|+..|+|||++.+..++.++|||||||++|+|++|+.
T Consensus 145 -----------------~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 207 (265)
T cd06652 145 -----------------VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP 207 (265)
T ss_pred -----------------EEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence 55555555543211 1223458889999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
||...+.......+.. ...........+..+.++|.+|+. + |..||++.++++|+|+.
T Consensus 208 p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~-~----p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 208 PWAEFEAMAAIFKIAT--QPTNPVLPPHVSDHCRDFLKRIFV-E----AKLRPSADELLRHTFVH 265 (265)
T ss_pred CCCccchHHHHHHHhc--CCCCCCCchhhCHHHHHHHHHHhc-C----hhhCCCHHHHhcCcccC
Confidence 9987655444433221 111122334566778899999873 5 89999999999999973
No 201
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-41 Score=317.79 Aligned_cols=251 Identities=30% Similarity=0.493 Sum_probs=205.4
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
|++.+.||.|++|.||+|.++.+|..||+|++.... .....+.+|+.+++.++|+++ +++++++.+++..|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-----v~~~~~~~~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI-----VRLLDVVHSENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc-----cCHhheeccCCeEEE
Confidence 678899999999999999999999999999986432 233567789999999988877 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+|||++++|.+++.......+++..+..++.|++.||+|||++|++|+||+|+||+++.++
T Consensus 76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~------------------- 136 (283)
T cd07835 76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG------------------- 136 (283)
T ss_pred EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC-------------------
Confidence 9999988999999876545689999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||.+....... ....++..|+|||++.+. .++.++|||||||++|+|++|+.||...+....
T Consensus 137 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 208 (283)
T cd07835 137 --------ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ 208 (283)
T ss_pred --------cEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 56777777765432211 223568899999988765 578999999999999999999999988776655
Q ss_pred HHHHHHHhCCCCh-------------------------hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 327 LAMMERVLGPLPH-------------------------HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 327 ~~~i~~~~~~~p~-------------------------~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+..+.+....... .....++..+.++|.+|++.+ |.+||+++++++|+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYD----PAKRISAKAALQHPYF 283 (283)
T ss_pred HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCC----hhhCcCHHHHhcCCCC
Confidence 5544433222111 112344567889999999998 9999999999999997
No 202
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.7e-42 Score=317.60 Aligned_cols=247 Identities=19% Similarity=0.267 Sum_probs=198.5
Q ss_pred CCCeEEEeeeccccceEEEEEEeC---CCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++... .....+.+|+.++++++|+|+ +++++++..+
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNI-----VRLEGVITRG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEecC
Confidence 357999999999999999999865 456789999987542 334567889999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
++.++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~------------ 145 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLV------------ 145 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCc------------
Confidence 9999999999 889999998753 36899999999999999999999999999999999999987764
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ 319 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~ 319 (411)
++++|||.+....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 146 ---------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~ 210 (266)
T cd05064 146 ---------------CKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred ---------------EEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcC
Confidence 5555555443321111 11234678999999999999999999999999999875 999999
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.+..+.+..+...... + ....++..+.+++.+|++.+ |.+||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~li~~c~~~~----p~~RP~~~~i~~~ 261 (266)
T cd05064 211 DMSGQDVIKAVEDGFRL-P--APRNCPNLLHQLMLDCWQKE----RGERPRFSQIHSI 261 (266)
T ss_pred cCCHHHHHHHHHCCCCC-C--CCCCCCHHHHHHHHHHcCCC----chhCCCHHHHHHH
Confidence 88777766665543221 1 22346677888999887777 9999999988763
No 203
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.5e-41 Score=326.75 Aligned_cols=258 Identities=27% Similarity=0.464 Sum_probs=210.1
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
+.++|.+.+.||+|+||.||+|.+..+++.||||++... ......+.+|+.+++.+.|+|+ +++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~~~~~~~~ 87 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV-----IGLLDVFTSAV 87 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCc-----cchhheecccc
Confidence 357899999999999999999999999999999998643 2234557789999999988887 8888887653
Q ss_pred -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 -----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
..+++||||+..+|.+++. ..+++..+..++.|++.||+|||+.||+||||||+||+++.++
T Consensus 88 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~--------- 154 (342)
T cd07879 88 SGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC--------- 154 (342)
T ss_pred cCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC---------
Confidence 3579999999778877653 2589999999999999999999999999999999999997766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.++|+|||++...........++..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 155 ------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 155 ------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred ------------------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 6788888887765544445578889999999876 468999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCChhH---------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 320 THENLEHLAMMERVLGPLPHHM---------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~---------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
+.+....+..+....+..+..+ .+..+..+.++|.+||+.| |.+||++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----P~~R~~~~ 292 (342)
T cd07879 217 GKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD----VDKRLTAT 292 (342)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC----hhhCcCHH
Confidence 8776665555544332221111 1234566889999999988 99999999
Q ss_pred HHHhcCCCCcccccC
Q 015222 373 AVWKLLRLPVIDLYS 387 (411)
Q Consensus 373 ~il~~~~~~~~~~~~ 387 (411)
+++.|+||.......
T Consensus 293 e~l~h~~f~~~~~~~ 307 (342)
T cd07879 293 EALEHPYFDSFRDAD 307 (342)
T ss_pred HHhcCcchhhccccc
Confidence 999999999887643
No 204
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.8e-41 Score=314.57 Aligned_cols=248 Identities=27% Similarity=0.408 Sum_probs=199.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-- 164 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-- 164 (411)
.|++.+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++++.|+++ +++++++.+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 77 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI-----VQYYGCLRDRA 77 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCe-----eeEEEEEEcCC
Confidence 6899999999999999999999999999999986321 233567789999999988877 999998765
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
++.++++|||+ +++|.+++.... .+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 78 ~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~------------ 143 (266)
T cd06651 78 EKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG------------ 143 (266)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC------------
Confidence 46789999999 889999998765 589999999999999999999999999999999999997766
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccC------CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++..... ......++..|+|||.+.+..++.++|||||||++|||++|+.|
T Consensus 144 ---------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~p 208 (266)
T cd06651 144 ---------------NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208 (266)
T ss_pred ---------------CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCC
Confidence 466666666543221 11224578899999999988899999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
|...+.......+... .....+....++.+++++ +|+..+ |++||+++++++||||+
T Consensus 209 f~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li-~~~~~~----p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 209 WAEYEAMAAIFKIATQ--PTNPQLPSHISEHARDFL-GCIFVE----ARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ccccchHHHHHHHhcC--CCCCCCchhcCHHHHHHH-HHhcCC----hhhCcCHHHHhcCcccc
Confidence 9876554444333221 112223344567778888 455455 99999999999999986
No 205
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1e-41 Score=317.06 Aligned_cols=250 Identities=24% Similarity=0.410 Sum_probs=205.4
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-----------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW 161 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~ 161 (411)
+|.+.+.||.|+||.||+|.+..+++.||+|.++... ...+.+..|+.+++.+.|+++ ++++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~ 76 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNI-----VQYLGF 76 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEE
Confidence 5889999999999999999999999999999885321 112456789999999988877 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
+...+..++||||+ +++|.+++.+.. .+++..+..++.||+.||.|||++|++|+||||+||+++.++
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--------- 145 (272)
T cd06629 77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--------- 145 (272)
T ss_pred eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC---------
Confidence 99999999999999 999999998764 689999999999999999999999999999999999998766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCC--CCccchhHHHHHHHHHHHh
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~ellt 313 (411)
.++|+|||.+...... .....|+..|+|||.+.+.. ++.++|+||||+++|+|++
T Consensus 146 ------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~ 207 (272)
T cd06629 146 ------------------ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA 207 (272)
T ss_pred ------------------eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh
Confidence 5666666666543221 12246788999999988754 8899999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHH--hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 314 GEALFQTHENLEHLAMMERV--LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
|..||...+..+.+..+... ...++......++..+.+++.+|+..+ |..||++.++++|+|+
T Consensus 208 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~~~~ 272 (272)
T cd06629 208 GRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTIN----PDNRPTARELLQHPFI 272 (272)
T ss_pred CCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCC----hhhCCCHHHHhhCCCC
Confidence 99999765554444332221 234444555567888999999999998 9999999999999996
No 206
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.1e-41 Score=315.15 Aligned_cols=244 Identities=26% Similarity=0.383 Sum_probs=204.5
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||.|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++.+.|+++ +++++.+.+++..++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI-----VKLYRTFKDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCE-----eeeeeeEEcCCccEEEEecC
Confidence 699999999999999999999999996432 344678889999999988877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.+.. .+++..+..++.||+.||+|||++|++|+||||+||+++.++
T Consensus 76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~----------------------- 130 (262)
T cd05572 76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG----------------------- 130 (262)
T ss_pred CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC-----------------------
Confidence 899999998764 589999999999999999999999999999999999998766
Q ss_pred CCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC--hHHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE--NLEHLAMM 330 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~--~~~~~~~i 330 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+ ..+....+
T Consensus 131 ----~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 206 (262)
T cd05572 131 ----YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDI 206 (262)
T ss_pred ----CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHH
Confidence 5777888877654432 233468889999999988889999999999999999999999998766 44444444
Q ss_pred HH--HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccc
Q 015222 331 ER--VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDL 385 (411)
Q Consensus 331 ~~--~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~ 385 (411)
.. .....|. ..+..+.+++.+|+..+ |.+|++ ++++++|+||.+.++
T Consensus 207 ~~~~~~~~~~~----~~~~~~~~~i~~~l~~~----p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 207 LKGNGKLEFPN----YIDKAAKDLIKQLLRRN----PEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred hccCCCCCCCc----ccCHHHHHHHHHHccCC----hhhCcCCcccCHHHHhcChhhhCCCC
Confidence 32 1222332 23678999999999888 888888 999999999998755
No 207
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.6e-41 Score=311.22 Aligned_cols=250 Identities=25% Similarity=0.346 Sum_probs=209.4
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++.++|+++ +++++.+..++..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI-----IEYYENFLEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCch-----hheeeeEecCCEEE
Confidence 589999999999999999999999999999998643 2345667889999999988877 99999999899999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.++
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~----------------- 138 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK----------------- 138 (256)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-----------------
Confidence 999999 88999999876545689999999999999999999999999999999999997543
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
..++|+|||.+....... ....|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.+....
T Consensus 139 ---------~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 209 (256)
T cd08220 139 ---------MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL 209 (256)
T ss_pred ---------CEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH
Confidence 246888888776554322 235688899999999988899999999999999999999999988766555
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
...+...... ......+..+.+++.+|+..+ |..||++.++++|||+
T Consensus 210 ~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 210 VLKIMSGTFA---PISDRYSPDLRQLILSMLNLD----PSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHhcCCC---CCCCCcCHHHHHHHHHHccCC----hhhCCCHHHHhhCCCC
Confidence 4444332111 122245677899999998888 9999999999999996
No 208
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-41 Score=314.92 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=210.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
+|++.+.||+|++|.||+|.+..+++.||+|++.... .....+.+|+.++.+++|+++ +++++++...+..++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l 76 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-----VKCYGAFYKEGEISI 76 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEccCCeEEE
Confidence 6899999999999999999999999999999987543 346778899999999988777 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
||||+ +++|.+++.... .+++..+..++.||+.||+|||+ .|++|+||+|+||+++.++
T Consensus 77 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~----------------- 137 (264)
T cd06623 77 VLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG----------------- 137 (264)
T ss_pred EEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC-----------------
Confidence 99999 899999998764 69999999999999999999999 9999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus 138 ----------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 207 (264)
T cd06623 138 ----------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS 207 (264)
T ss_pred ----------CEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccC
Confidence 56777777665543222 23467889999999998889999999999999999999999998764212
Q ss_pred HHHHHHHHhCCCChhHHHh-hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 326 HLAMMERVLGPLPHHMVIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~-~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
................... ++..+.++|.+|+..+ |+.||++.++++|+|+++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----p~~R~~~~~ll~~~~~~~~~ 263 (264)
T cd06623 208 FFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKD----PKKRPSAAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCC----hhhCCCHHHHHhCHHHHhcc
Confidence 2222222222222222333 6778999999999988 99999999999999998754
No 209
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-41 Score=315.81 Aligned_cols=252 Identities=23% Similarity=0.406 Sum_probs=206.5
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.++++++|+++ +++++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI-----IRMLGATCED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCce-----ehhhceeccC
Confidence 4788899999999999999999999999999986422 234677889999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+..++||||+ +++|.+++.+.. .+++..+..++.||+.||.|||++|++|+||||+||+++.++
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~------------- 140 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG------------- 140 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------
Confidence 9999999999 899999998755 689999999999999999999999999999999999997654
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
..++|+|||.+...... .....|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 141 -------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p 207 (268)
T cd06630 141 -------------QRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP 207 (268)
T ss_pred -------------CEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 14677777776543321 1234678899999999888899999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHh-CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 318 FQTHENLEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
|...+.......+.+.. ...........+..+.+++.+|+..+ |+.||++.++++|+||.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 208 WNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQ----PEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCC----cccCcCHHHHhcCcccC
Confidence 97654433333332221 12222333456778999999999999 99999999999999984
No 210
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.6e-41 Score=326.58 Aligned_cols=265 Identities=23% Similarity=0.399 Sum_probs=208.0
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC---
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--- 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--- 165 (411)
+..+|++.+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++.++|+++ +++++.+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~ 77 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNI-----VKVYEVLGPSGSD 77 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcc-----hhhHhhhcccccc
Confidence 3578999999999999999999999999999999986433 344667889999999988887 8887665543
Q ss_pred -----------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 166 -----------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 166 -----------~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
...|+||||++++|.+++... .+++..++.++.||+.||+|||+.||+||||||+||+++.++
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~--- 151 (342)
T cd07854 78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED--- 151 (342)
T ss_pred cccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC---
Confidence 468999999987999888654 589999999999999999999999999999999999997533
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecC-CCCCccchhHHHHHH
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCI 307 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 307 (411)
..++|+|||.+...... .....|+..|+|||++.+ ..++.++|||||||+
T Consensus 152 -----------------------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvi 208 (342)
T cd07854 152 -----------------------LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI 208 (342)
T ss_pred -----------------------ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHH
Confidence 24677777776543221 112357889999998765 468899999999999
Q ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCC--------------------------ChhHHHhhhhhhhhhhccCCccCC
Q 015222 308 LVELCSGEALFQTHENLEHLAMMERVLGPL--------------------------PHHMVIRADRRAEKYFRRGARLDW 361 (411)
Q Consensus 308 l~elltg~~pf~~~~~~~~~~~i~~~~~~~--------------------------p~~~~~~~~~~~~~li~~~l~~~~ 361 (411)
+|+|++|+.||.+.+..+....+....... ........+..+.+++.+||..+
T Consensus 209 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d- 287 (342)
T cd07854 209 FAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFN- 287 (342)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCC-
Confidence 999999999998776655444333221100 01112345677889999999999
Q ss_pred CCCCCcHHHHHHHHhcCCCCcccccCCCCCc
Q 015222 362 PDGATSRDSMRAVWKLLRLPVIDLYSASPNC 392 (411)
Q Consensus 362 ~~rp~~R~t~~~il~~~~~~~~~~~~~~~~~ 392 (411)
|.+||++.++++|+||+....+...|--
T Consensus 288 ---P~~R~t~~ell~h~~~~~~~~~~~~~~~ 315 (342)
T cd07854 288 ---PMDRLTAEEALMHPYMSCYSCPFDEPVS 315 (342)
T ss_pred ---chhccCHHHHhCCCccccccCCccccCC
Confidence 9999999999999999977665444443
No 211
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-43 Score=336.80 Aligned_cols=251 Identities=24% Similarity=0.349 Sum_probs=211.2
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEec-cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-C
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G 176 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~ 176 (411)
.||+|.||+||-|+|..|...+|||.+. +.....+.+.+|+.+.++|+|.|| |++++.+..++++-|.||-+ |
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNI-----VrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNI-----VRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhH-----HHHhhccCCCCeEEEEeecCCC
Confidence 7999999999999999999999999986 444566778899999999999998 99999999999999999999 9
Q ss_pred CCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 177 PSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 177 ~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
|+|.++++..- .++ .+..+..+.+||++||.|||++.|||||||-+||||+-
T Consensus 657 GSLSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT------------------------- 710 (1226)
T KOG4279|consen 657 GSLSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT------------------------- 710 (1226)
T ss_pred CcHHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-------------------------
Confidence 99999998654 355 78999999999999999999999999999999999964
Q ss_pred CCCCCeeEeecCCcccccC---CCcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
-.+.+||+|||.++.... -..++.||..|||||++..+ .|+.++|||||||++.||.||++||......+ ..+
T Consensus 711 -ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AAM 788 (1226)
T KOG4279|consen 711 -YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AAM 788 (1226)
T ss_pred -ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-Hhh
Confidence 234789999998876432 23557899999999999876 69999999999999999999999997654322 233
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
..-+.....+.++..++.+++.||.+|+..+ |..||+++++|..||++.-...
T Consensus 789 FkVGmyKvHP~iPeelsaeak~FilrcFepd----~~~R~sA~~LL~DpFlq~~~kk 841 (1226)
T KOG4279|consen 789 FKVGMYKVHPPIPEELSAEAKNFILRCFEPD----PCDRPSAKDLLQDPFLQHNNKK 841 (1226)
T ss_pred hhhcceecCCCCcHHHHHHHHHHHHHHcCCC----cccCccHHHhccCcccccCCCC
Confidence 3333333333444556788999999999999 9999999999999999976433
No 212
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.3e-42 Score=316.05 Aligned_cols=246 Identities=23% Similarity=0.329 Sum_probs=205.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ...+.+.+|++++++++|+|+ +++++.+..++..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-----VNLWYSFQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-----HHHHHhhcCCCeE
Confidence 4899999999999999999999999999999997432 345678889999999988887 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++||||+ +++|.+++.... .+++..+..++.||+.||.|||++|++|+||||+||++++++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~---------------- 137 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG---------------- 137 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC----------------
Confidence 9999999 999999998763 699999999999999999999999999999999999998766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh--
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN-- 323 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~-- 323 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.
T Consensus 138 -----------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 206 (258)
T cd05578 138 -----------HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI 206 (258)
T ss_pred -----------CEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH
Confidence 5677777766544322 2234678899999999988899999999999999999999999987664
Q ss_pred -HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH--HHHHhcCCC
Q 015222 324 -LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM--RAVWKLLRL 380 (411)
Q Consensus 324 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~--~~il~~~~~ 380 (411)
..............| ...+..+.++|.+|+..+ |.+|+++ +++++|+||
T Consensus 207 ~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~----p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 207 RDQIRAKQETADVLYP----ATWSTEAIDAINKLLERD----PQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHHHHhccccccCc----ccCcHHHHHHHHHHccCC----hhHcCCccHHHHhcCCCC
Confidence 222222221222333 345678899999999999 7788888 999999997
No 213
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.1e-42 Score=332.68 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=195.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~ 163 (411)
++|++.+.||+|+||.||+|++..+ +..||||+++... ...+.+.+|+.+++.+ .|+|| +++++.+.
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nI-----v~~~~~~~ 112 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNI-----VNLLGACT 112 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCce-----eeEeeEec
Confidence 4799999999999999999986543 3579999997432 3345678899999999 67777 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcC-------------------------------------------------------
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------- 187 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------- 187 (411)
..+.+++||||+ +|+|.+++....
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 999999999999 999999986431
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 188 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 188 -------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~----------------------- 249 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR----------------------- 249 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC-----------------------
Confidence 12478889999999999999999999999999999999998766
Q ss_pred CCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~ 328 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |+.||..........
T Consensus 250 ----~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~ 325 (374)
T cd05106 250 ----VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFY 325 (374)
T ss_pred ----eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHH
Confidence 46666666665432211 11234567999999998899999999999999999997 999998765544333
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+...... .......+..+.+++.+|++.+ |.+||++.++++.
T Consensus 326 ~~~~~~~~--~~~~~~~~~~l~~li~~cl~~d----p~~RPs~~~l~~~ 368 (374)
T cd05106 326 KMVKRGYQ--MSRPDFAPPEIYSIMKMCWNLE----PTERPTFSQISQL 368 (374)
T ss_pred HHHHcccC--ccCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 33322111 1112234678899999998888 9999999998864
No 214
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.5e-41 Score=325.95 Aligned_cols=276 Identities=24% Similarity=0.393 Sum_probs=212.1
Q ss_pred cCCCeEE-EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhh---------------HHHHHHHHHHHHHhcCCCCCc
Q 015222 90 LTPRYRI-LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------------EAAMIEIDVLQRLARHDIGGT 153 (411)
Q Consensus 90 ~~~~y~i-~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~---------------~~~~~E~~~l~~l~~~~i~~~ 153 (411)
+.++|.. .+.||.|+||+||+|.+..+++.||||+++...... ..+.+|+.+++.+.|+++
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--- 82 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI--- 82 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce---
Confidence 4567875 467999999999999999999999999986432211 246789999999988777
Q ss_pred ceEEEeeeeecCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 015222 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 154 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~ 233 (411)
+++++++..++..++||||+.++|.+++.... .+++..+..++.||+.||+|||+.||+|+||||+||+++.++.+
T Consensus 83 --v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 83 --MGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred --eeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCE
Confidence 99999999999999999999889999987654 69999999999999999999999999999999999999988877
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHH
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell 312 (411)
+++|||++.....+.... ..-.+.+. ..........++..|+|||.+.+. .++.++|||||||++|+|+
T Consensus 159 kl~dfg~~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~ 228 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSD--------TLSKDETM--QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELL 228 (335)
T ss_pred EECCccceeecccccccc--------cccccccc--cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHH
Confidence 777776554332111000 00000000 000111223568889999998765 4789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChh------------------------HHHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPHH------------------------MVIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~~------------------------~~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
+|..||.+.+..+.+..+....+..+.. .....+..+.++|.+||..+ |++|
T Consensus 229 tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~R 304 (335)
T PTZ00024 229 TGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLN----PLER 304 (335)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCC----chhc
Confidence 9999999888777776665544322211 11233567889999999999 9999
Q ss_pred HHHHHHHhcCCCCccccc
Q 015222 369 DSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 369 ~t~~~il~~~~~~~~~~~ 386 (411)
|++.+++.|+||+.....
T Consensus 305 ~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 305 ISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cCHHHHhcCcccCCCCCC
Confidence 999999999999976544
No 215
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.9e-41 Score=312.27 Aligned_cols=247 Identities=26% Similarity=0.374 Sum_probs=205.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
+|++.++||+|+||.||++.+..+++.||+|.++.. ....+.+.+|+.+++.+.|+|+ +++++.+.+++.+|+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-----VAFKESFEADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEECCEEEE
Confidence 589999999999999999999999999999998632 3345667889999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||++++++
T Consensus 76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~------------------ 137 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG------------------ 137 (255)
T ss_pred EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC------------------
Confidence 99999 89999998765545689999999999999999999999999999999999997766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||.+...... .....|+..|+|||++.+..++.++||||||+++|+|++|..||...+....
T Consensus 138 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 208 (255)
T cd08219 138 ---------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL 208 (255)
T ss_pred ---------cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence 5677777766543322 1235688999999999988899999999999999999999999987766555
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...+....... ....++..+.+++.+|++.+ |.+||++.+++...
T Consensus 209 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~----P~~Rp~~~~il~~~ 253 (255)
T cd08219 209 ILKVCQGSYKP---LPSHYSYELRSLIKQMFKRN----PRSRPSATTILSRG 253 (255)
T ss_pred HHHHhcCCCCC---CCcccCHHHHHHHHHHHhCC----cccCCCHHHHhhcc
Confidence 55444322211 12345677899999998888 99999999998643
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.5e-42 Score=323.26 Aligned_cols=256 Identities=22% Similarity=0.349 Sum_probs=209.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
+.|.....||+|+||.||++.+..++..||||.+.... ...+.+.+|+.+++.+.|+|+ +++++.+..++..++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~~l 96 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENV-----VDMYNSYLVGDELWV 96 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcH-----HHHHHheecCCeEEE
Confidence 45666788999999999999999999999999986432 345567889999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 97 v~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~------------------ 155 (292)
T cd06658 97 VMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG------------------ 155 (292)
T ss_pred EEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC------------------
Confidence 99999 88999988653 489999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...... .....|+..|+|||.+.+..++.++|||||||++|||++|..||.+.+....
T Consensus 156 ---------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~ 226 (292)
T cd06658 156 ---------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 226 (292)
T ss_pred ---------CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 5666666665432211 1234688999999999888899999999999999999999999988776665
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
+..+........ ......+..+.+++.+|+..+ |.+||+++++++|+||......+
T Consensus 227 ~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 227 MRRIRDNLPPRV-KDSHKVSSVLRGFLDLMLVRE----PSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred HHHHHhcCCCcc-ccccccCHHHHHHHHHHccCC----hhHCcCHHHHhhChhhhccCCcc
Confidence 555444322211 112245677889999998888 99999999999999999776554
No 217
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.6e-41 Score=321.14 Aligned_cols=256 Identities=27% Similarity=0.452 Sum_probs=200.5
Q ss_pred CeEEEeeeccccceEEEEEEeCC--CCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 93 RYRILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~--~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
+|++.++||+|+||.||+|.+.. +++.||+|++.... ...+...+|+.+++.++|+++ +++++++.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENV-----VSLVEVFLEHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCc-----cceEEEEeCCC
Confidence 58999999999999999999988 89999999997532 334567789999999998887 9999999887
Q ss_pred -CeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 166 -NHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 166 -~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
+.+++||||++++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~---------- 145 (316)
T cd07842 76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG---------- 145 (316)
T ss_pred CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC----------
Confidence 8899999999888888876432 13689999999999999999999999999999999999998722
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg 314 (411)
+.+..+||+|||++...... .....+|..|+|||++.+. .++.++|||||||++|+|++|
T Consensus 146 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~ 212 (316)
T cd07842 146 -------------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL 212 (316)
T ss_pred -------------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence 12336777777766643322 1234678899999988764 589999999999999999999
Q ss_pred CCCCCCCChHH---------HHHHHHHHhCCCChh---------------------------HH----H--hhhhhhhhh
Q 015222 315 EALFQTHENLE---------HLAMMERVLGPLPHH---------------------------MV----I--RADRRAEKY 352 (411)
Q Consensus 315 ~~pf~~~~~~~---------~~~~i~~~~~~~p~~---------------------------~~----~--~~~~~~~~l 352 (411)
+.||.+..... .+..+....+..... .. . ..+..+.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 99998654322 222222221111110 00 0 345578899
Q ss_pred hccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 353 FRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 353 i~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+.+||..+ |.+|||+.++++|+||
T Consensus 293 i~~~l~~~----P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYD----PTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCC----cccCcCHHHHhcCCCC
Confidence 99999998 9999999999999997
No 218
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.6e-41 Score=320.28 Aligned_cols=257 Identities=22% Similarity=0.277 Sum_probs=209.7
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
..++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.++|+|+ +++++++.+.
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-----v~~~~~~~~~ 87 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNT-----IEYKGCYLRE 87 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEEeC
Confidence 3467999999999999999999999999999999986322 233567789999999988877 9999999999
Q ss_pred CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 166 ~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
+..++||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++
T Consensus 88 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~-------------- 152 (307)
T cd06607 88 HTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG-------------- 152 (307)
T ss_pred CeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--------------
Confidence 9999999999888888876543 3689999999999999999999999999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.++|+|||++...... ....|+..|+|||++. ...++.++||||||+++|||++|+.||.+.+
T Consensus 153 -------------~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 153 -------------TVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred -------------CEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 6788888877654332 2346888999999985 3468899999999999999999999998766
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.......+... ..+......++..+.+++.+|+..+ |.+||++.+++.|+|+......
T Consensus 219 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~~ 276 (307)
T cd06607 219 AMSALYHIAQN--DSPTLSSNDWSDYFRNFVDSCLQKI----PQDRPSSEELLKHRFVLRERPP 276 (307)
T ss_pred HHHHHHHHhcC--CCCCCCchhhCHHHHHHHHHHhcCC----hhhCcCHHHHhcChhhcccCCc
Confidence 65544433321 1222222345677899999998888 9999999999999999976543
No 219
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.3e-41 Score=311.97 Aligned_cols=248 Identities=26% Similarity=0.431 Sum_probs=202.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh---hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+..|+.+++.++|+++ +++++.+...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-----VKYYGVEVHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-----hheeeeEecCCEEE
Confidence 69999999999999999999999999999999975433 56778899999999988877 99999998899999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+|+||+ +++|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++
T Consensus 76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~----------------- 136 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG----------------- 136 (264)
T ss_pred EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC-----------------
Confidence 999999 899999998754 588999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC-------cccccCCCccccceecCCC---CCccchhHHHHHHHHHHHhCCCCC
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGLG---WNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~---~~~~~DiwSlGvil~elltg~~pf 318 (411)
.++|+|||.+....... ....++..|+|||++.+.. ++.++||||||+++|+|++|+.||
T Consensus 137 ----------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf 206 (264)
T cd06626 137 ----------VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPW 206 (264)
T ss_pred ----------CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCc
Confidence 45666666554432211 1245788999999998766 889999999999999999999999
Q ss_pred CCCChHHHHHHHHHHh--CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 319 QTHENLEHLAMMERVL--GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
...+............ ..+|. ....+..+.++|.+|+..+ |.+||++.+++.|+|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~----p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 207 SELDNEFQIMFHVGAGHKPPIPD--SLQLSPEGKDFLDRCLESD----PKKRPTASELLQHPFV 264 (264)
T ss_pred cCCcchHHHHHHHhcCCCCCCCc--ccccCHHHHHHHHHHccCC----cccCCCHHHHhcCCCC
Confidence 7654332222211111 12222 1234677889999998888 9999999999999996
No 220
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.3e-41 Score=317.48 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=209.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..|+.+++||.|+||.||+|.+..++..||+|++... ......+.+|+.+++++.|+++ +++++.+.+++..+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEECCEEE
Confidence 4588899999999999999999999999999998743 2344667889999999988777 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++... .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++
T Consensus 79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~----------------- 138 (277)
T cd06640 79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG----------------- 138 (277)
T ss_pred EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC-----------------
Confidence 999999 89999998754 589999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....++..|+|||++.+..++.++|+|||||++|||++|..||...+...
T Consensus 139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06640 139 ----------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR 208 (277)
T ss_pred ----------CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence 4666666666443221 122457889999999998889999999999999999999999998776655
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
....+.. ..+.......+..+.+++.+|+..+ |..||++.++++|+|+.+....
T Consensus 209 ~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 209 VLFLIPK---NNPPTLTGEFSKPFKEFIDACLNKD----PSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred Hhhhhhc---CCCCCCchhhhHHHHHHHHHHcccC----cccCcCHHHHHhChHhhhcchh
Confidence 4443322 2223334456677889999998888 9999999999999999876653
No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.7e-41 Score=315.97 Aligned_cols=256 Identities=18% Similarity=0.363 Sum_probs=200.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHH-HHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDV-LQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~-l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
++|++.+.||+|+||.||+|.++.+|+.||+|+++... .....+..|+.+ ++.+.|+|+ +++++++..++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----v~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYT-----VTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCe-----eeeeEEEecCCcE
Confidence 36999999999999999999999999999999987532 223344556655 444455555 9999999999999
Q ss_pred EEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 169 CIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
|+||||+.++|.+++... ....+++..++.++.||+.||+|||++ +++||||||+||+++.++
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~-------------- 141 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG-------------- 141 (283)
T ss_pred EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--------------
Confidence 999999988998888652 224689999999999999999999997 999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecC----CCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG----LGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.+||+|||.+....... ....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 142 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~ 208 (283)
T cd06617 142 -------------QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYD 208 (283)
T ss_pred -------------CEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCC
Confidence 57777777776543221 22468889999999865 356899999999999999999999997
Q ss_pred CCC-hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 320 THE-NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 320 ~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
... ..+.+..+.. ...+......++..+.+++.+||..+ |..||++.++++|+||.....
T Consensus 209 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~ 269 (283)
T cd06617 209 SWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKN----YKERPNYPELLQHPFFELHLS 269 (283)
T ss_pred ccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCchhhhccc
Confidence 532 2233333222 11121112346778999999999988 999999999999999998653
No 222
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.6e-41 Score=330.45 Aligned_cols=248 Identities=23% Similarity=0.326 Sum_probs=195.7
Q ss_pred CCeEEEeeeccccceEEEEEEe-----CCCCcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~ 163 (411)
++|++.+.||+|+||.||+|++ ..++..||||+++... ...+.+.+|+.+++.+ .|+|| +++++++.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnI-----v~l~~~~~ 109 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINI-----VNLLGACT 109 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcce-----eeeeeeec
Confidence 4799999999999999999974 3456789999997432 3445678899999999 67766 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcC-------------------------------------------------------
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------- 187 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------- 187 (411)
..+..++||||+ +|+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 999999999999 999999987532
Q ss_pred ------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 188 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 188 ------------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~------------------ 251 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR------------------ 251 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC------------------
Confidence 12478889999999999999999999999999999999998765
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 252 ---------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~ 322 (375)
T cd05104 252 ---------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV 322 (375)
T ss_pred ---------cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc
Confidence 46677777665432221 11234567999999999999999999999999999998 9999987654
Q ss_pred HHHHHH-HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 324 LEHLAM-MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 324 ~~~~~~-i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...... +....... .....+..+.+++.+|++.+ |++||++.++++..
T Consensus 323 ~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~d----P~~RPs~~eil~~l 371 (375)
T cd05104 323 DSKFYKMIKEGYRML---SPECAPSEMYDIMKSCWDAD----PLKRPTFKQIVQLI 371 (375)
T ss_pred hHHHHHHHHhCccCC---CCCCCCHHHHHHHHHHccCC----hhHCcCHHHHHHHH
Confidence 433332 22221111 11234567899999998888 99999999998764
No 223
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.7e-41 Score=313.74 Aligned_cols=246 Identities=21% Similarity=0.340 Sum_probs=202.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.++||+|+||.||+|.+. ++..||+|.+.......+.+.+|+.+++.++|+++ +++++.+...+..+++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv 79 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKL-----VRLYAVVTKEEPIYII 79 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCCcEEE
Confidence 57999999999999999999865 45679999987655556788899999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.+.....+++..+..++.|++.||+|||+.|++||||||+||+++.++
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~------------------- 140 (261)
T cd05072 80 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL------------------- 140 (261)
T ss_pred EecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC-------------------
Confidence 9999 89999999876555789999999999999999999999999999999999998776
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+
T Consensus 141 --------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~ 212 (261)
T cd05072 141 --------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD 212 (261)
T ss_pred --------cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH
Confidence 45666666665433221 12245678999999988889999999999999999998 999998877666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
....+..... .+ .....+..+.+++.+|+..+ |++||+++++.+.
T Consensus 213 ~~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 257 (261)
T cd05072 213 VMSALQRGYR-MP--RMENCPDELYDIMKTCWKEK----AEERPTFDYLQSV 257 (261)
T ss_pred HHHHHHcCCC-CC--CCCCCCHHHHHHHHHHccCC----cccCcCHHHHHHH
Confidence 6655544321 11 12346678899999999888 9999999998764
No 224
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.4e-41 Score=317.98 Aligned_cols=248 Identities=23% Similarity=0.294 Sum_probs=202.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC-----cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
++|++.+.||+|+||.||+|.+...+ ..||+|.++... .....+.+|+.+++++.|+++ +++++++..
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI-----VCLLGVCTK 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCccc-----ceEEEEEcC
Confidence 46899999999999999999876655 689999986432 344567889999999988877 999999998
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
.+..+++|||+ +++|.+++..... ..+++..+..++.||+.||.|||++||+|+||||+||++++
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 89999999999 8999999976421 35888999999999999999999999999999999999987
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHH
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 304 (411)
++ .++|+|||++...... .....+++.|+|||.+.+..++.++|||||
T Consensus 160 ~~---------------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl 212 (283)
T cd05048 160 GL---------------------------TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212 (283)
T ss_pred CC---------------------------cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence 66 4666666666543211 122356788999999998899999999999
Q ss_pred HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 305 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||++|||++ |..||.+.+..+....+..... .......+..+.+++.+|++.+ |.+||++.++++++
T Consensus 213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~l~~~c~~~~----p~~Rp~~~~i~~~l 280 (283)
T cd05048 213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQL---LPCPEDCPARVYALMIECWNEI----PARRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc---CCCcccCCHHHHHHHHHHccCC----hhhCcCHHHHHHHH
Confidence 999999998 9999998877766655543221 1123456788999999998887 99999999999864
No 225
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.8e-41 Score=311.63 Aligned_cols=249 Identities=25% Similarity=0.388 Sum_probs=200.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|++..+++.||||.++.. ......+.+|+.+++.++|+++ +++++++...+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV-----IKYLDSFIEDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcce-----eeeeeeEEECCe
Confidence 4799999999999999999999999999999987532 2334567889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.++||||+ +++|.+++... ....+++..+..++.||+.||.|||++||+|+||||+||+++.++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~------------- 143 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG------------- 143 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC-------------
Confidence 99999999 88999888632 223589999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+....... ....|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 144 --------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred --------------CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 56777777665543221 2346888999999999888999999999999999999999999654
Q ss_pred Ch--HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 322 EN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 322 ~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.. .+....+.. ...+.......+..+.+++.+|+..+ |++||++.++++..
T Consensus 210 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rp~~~~vl~~~ 262 (267)
T cd08228 210 KMNLFSLCQKIEQ--CDYPPLPTEHYSEKLRELVSMCIYPD----PDQRPDIGYVHQIA 262 (267)
T ss_pred cccHHHHHHHHhc--CCCCCCChhhcCHHHHHHHHHHCCCC----cccCcCHHHHHHHH
Confidence 32 222222222 22333333456677889999887777 99999999998753
No 226
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=7e-41 Score=320.89 Aligned_cols=264 Identities=25% Similarity=0.412 Sum_probs=209.6
Q ss_pred CeEEEeeeccccceEEEEEEeCCC--CcEEEEEEeccc---hhhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeec--
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEK--KELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY-- 164 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~--~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~-- 164 (411)
+|++.+.||+|+||.||+|.+..+ +..||+|++... ....+.+.+|+.+++++. |+|+ +++++....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNI-----TCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCh-----heeeeeeeecc
Confidence 589999999999999999999888 889999998642 223456778999999984 6766 888875432
Q ss_pred --CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 165 --RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 165 --~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
...++++||+++++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~---------- 143 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE---------- 143 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCC----------
Confidence 35689999999889999987654 6999999999999999999999999999999999999988774
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccC-------CCcccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-------DHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg 314 (411)
++|+|||.+..... ......||..|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 144 -----------------~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g 206 (332)
T cd07857 144 -----------------LKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR 206 (332)
T ss_pred -----------------EEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 55555555543221 1123468999999998776 4689999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHhCCCChhH---------------------------HHhhhhhhhhhhccCCccCCCCCCCc
Q 015222 315 EALFQTHENLEHLAMMERVLGPLPHHM---------------------------VIRADRRAEKYFRRGARLDWPDGATS 367 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~---------------------------~~~~~~~~~~li~~~l~~~~~~rp~~ 367 (411)
..||.+.+....+..+....+..+... ....+..+.+++.+||+.+ |.+
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~ 282 (332)
T cd07857 207 KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFD----PTK 282 (332)
T ss_pred CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCC----ccc
Confidence 999988776666655555444332211 1123567889999999988 999
Q ss_pred HHHHHHHHhcCCCCcccccCCCCCchh
Q 015222 368 RDSMRAVWKLLRLPVIDLYSASPNCLC 394 (411)
Q Consensus 368 R~t~~~il~~~~~~~~~~~~~~~~~~~ 394 (411)
||++.++++|+|+.........|.|-.
T Consensus 283 R~t~~~ll~~~~~~~~~~~~~~~~~~~ 309 (332)
T cd07857 283 RISVEEALEHPYLAIWHDPDDEPVCQK 309 (332)
T ss_pred CCCHHHHhcChhhhhhcCccccccccc
Confidence 999999999999998877777777644
No 227
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-41 Score=318.37 Aligned_cols=255 Identities=22% Similarity=0.345 Sum_probs=207.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++++.||+|+||+||++.+..+++.||+|++... ......+.+|+++++.++|+++ +++++.+...+.++
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 79 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-----VSFYGAFLNENNIC 79 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-----ceEeeeEecCCEEE
Confidence 5799999999999999999999999999999998643 2345678899999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+||||+ +++|.+++.+.+ .+++..+..++.|++.||.|||+ .|++|+||||+||+++.++
T Consensus 80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~---------------- 141 (284)
T cd06620 80 MCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG---------------- 141 (284)
T ss_pred EEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC----------------
Confidence 999999 899999987754 68999999999999999999997 5999999999999997766
Q ss_pred CCccccCCCCCCeeEeecCCccccc-CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH--
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-- 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~-- 324 (411)
.++|+|||++.... .......|+..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 142 -----------~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~ 210 (284)
T cd06620 142 -----------QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDD 210 (284)
T ss_pred -----------cEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhh
Confidence 56777777665432 1223357899999999998889999999999999999999999999865432
Q ss_pred ------HHHHHHHHHhCCCChhH-HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 325 ------EHLAMMERVLGPLPHHM-VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 325 ------~~~~~i~~~~~~~p~~~-~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
.....+.......+..+ ....+..+.+++.+|+..+ |.+||++.++++|+||....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----p~~Rpt~~e~~~~~~~~~~~ 273 (284)
T cd06620 211 GQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKD----PTERPTPQQLCAMPPFIQAL 273 (284)
T ss_pred hhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCC----cccCcCHHHHhcCccccccc
Confidence 11122222221111111 1235677899999998888 99999999999999997643
No 228
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.3e-42 Score=306.37 Aligned_cols=264 Identities=25% Similarity=0.421 Sum_probs=218.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC----cEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~----~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
..|+++++||+|+||.||+|..++++ +.+|||.++... .......+|+.+++.++|+|+ +.+..+|..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nv-----i~Lv~Vfl~ 98 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNV-----ISLVKVFLS 98 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcc-----hhHHHHHhc
Confidence 47999999999999999999766654 378999997543 334567899999999999988 888888866
Q ss_pred -CCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 165 -RNHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 165 -~~~~~lv~e~~~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
+..+++++||...+|++.++-+. ...++...++.|+.||+.|+.|||++=|+||||||.||||..+|
T Consensus 99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg--------- 169 (438)
T KOG0666|consen 99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG--------- 169 (438)
T ss_pred cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC---------
Confidence 78999999999999999997432 24689999999999999999999999999999999999998875
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCC-CCCccchhHHHHHHHHHHHh
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ellt 313 (411)
...+.|||+|||+++....... ..+-|.+|+|||++.|. .|+.+.||||+|||+.||+|
T Consensus 170 --------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLt 235 (438)
T KOG0666|consen 170 --------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLT 235 (438)
T ss_pred --------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHc
Confidence 3466899999999998765432 24679999999999987 79999999999999999999
Q ss_pred CCCCCCCCCh---------HHHHHHHHHHhCCCChhHHHh---------------------------------hhhhhhh
Q 015222 314 GEALFQTHEN---------LEHLAMMERVLGPLPHHMVIR---------------------------------ADRRAEK 351 (411)
Q Consensus 314 g~~pf~~~~~---------~~~~~~i~~~~~~~p~~~~~~---------------------------------~~~~~~~ 351 (411)
-++.|.+.+. .+++..|.++.|......++. -++.+-+
T Consensus 236 l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~ 315 (438)
T KOG0666|consen 236 LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALD 315 (438)
T ss_pred cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHH
Confidence 9999986532 356667777766543322221 1234778
Q ss_pred hhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 352 YFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 352 li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
++.++|..| |.+|.|++++++|++|.....+.
T Consensus 316 LL~klL~yD----P~kRIta~qAleh~yF~~d~lpp 347 (438)
T KOG0666|consen 316 LLQKLLTYD----PIKRITAEQALEHPYFTEDPLPP 347 (438)
T ss_pred HHHHHhccC----chhhccHHHHhcccccccCCCCC
Confidence 999999999 99999999999999999887663
No 229
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.7e-41 Score=313.57 Aligned_cols=250 Identities=30% Similarity=0.483 Sum_probs=204.7
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--CeE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NHI 168 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~~ 168 (411)
|++.++||.|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+.|+++ +++++++... +..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI-----VRLKEIVTSKGKGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCe-----eeheeeEecCCCCcE
Confidence 78899999999999999999999999999999754 2334567789999999988776 9999999887 899
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++||||++++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||||+||++++++
T Consensus 76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~----------------- 137 (287)
T cd07840 76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG----------------- 137 (287)
T ss_pred EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC-----------------
Confidence 9999999779999887653 3699999999999999999999999999999999999998776
Q ss_pred CccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||.+...... .....++..|+|||.+.+. .++.++||||||+++|||++|+.||...+.
T Consensus 138 ----------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~ 207 (287)
T cd07840 138 ----------VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE 207 (287)
T ss_pred ----------CEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 5666666666544332 1223567889999987764 688999999999999999999999998877
Q ss_pred HHHHHHHHHHhCCCChhH--------------------------HHh-hhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 324 LEHLAMMERVLGPLPHHM--------------------------VIR-ADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~--------------------------~~~-~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
...+..+....+..+... ... .+..+.+++.+|+..+ |.+||++.++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----P~~Rp~~~~~l~ 283 (287)
T cd07840 208 LEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLD----PKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCC----hhhCcCHHHHhh
Confidence 666665555433221111 111 2667888999998888 999999999999
Q ss_pred cCCC
Q 015222 377 LLRL 380 (411)
Q Consensus 377 ~~~~ 380 (411)
|+||
T Consensus 284 ~~~~ 287 (287)
T cd07840 284 HEYF 287 (287)
T ss_pred CcCC
Confidence 9997
No 230
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.4e-42 Score=315.93 Aligned_cols=254 Identities=24% Similarity=0.393 Sum_probs=208.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++|++.+.||.|+||.||+|.++.+++.||+|.+... ......+.+|+++++++.|+++ +++++.+...+..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYI-----VGFYGAFYNNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCch-----hhhheeeecCCEEE
Confidence 3688899999999999999999999999999998754 2445667889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++|||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||||+||+++.++
T Consensus 76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~---------------- 138 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG---------------- 138 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC----------------
Confidence 999999 799999998753 478999999999999999999999 9999999999999998765
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC--hH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE--NL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~--~~ 324 (411)
.++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||...+ ..
T Consensus 139 -----------~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 207 (265)
T cd06605 139 -----------QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD 207 (265)
T ss_pred -----------CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc
Confidence 6788888877654322 122578889999999999899999999999999999999999997542 11
Q ss_pred HHHHHHHHHhCCCChhHHH-hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 325 EHLAMMERVLGPLPHHMVI-RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~-~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.....+.......+..... .++..+.++|.+|+..+ |.+||++.+++.||||+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 208 GIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKD----PRERPSYKELLEHPFIKK 262 (265)
T ss_pred cHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCC----chhCcCHHHHhhCchhhc
Confidence 1222222222222222222 26778999999998888 999999999999999975
No 231
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4e-41 Score=348.85 Aligned_cols=144 Identities=22% Similarity=0.380 Sum_probs=131.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|+++++||+|+||.||+|.+..+++.||||+++... .....+..|+.+++.++|++| +++++.+...++
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-----VHLYYSLQSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-----CeEEEEEEECCE
Confidence 67999999999999999999999999999999997532 234667889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
+|+||||+ +++|.+++.... .+++..++.++.||+.||+|||++|||||||||+||||+.++.++|+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999 999999998754 68999999999999999999999999999999999999999999999999875
No 232
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.7e-41 Score=312.21 Aligned_cols=250 Identities=23% Similarity=0.341 Sum_probs=197.2
Q ss_pred CCCeEEEeee--ccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 91 TPRYRILSKM--GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 91 ~~~y~i~~~l--G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.++|++.+.+ |+|+||.||++.++.+++.+|+|++....... .|+.....+. .|+|++++++.+...+..
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~----~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMK----DNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhh----cCCCEEEEEEEEecCCee
Confidence 3567777776 99999999999999999999999986532211 1333322222 245569999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||+ +++|.+++.... .+++..+..++.||+.||.|||+.|++||||||+||+++.++
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~---------------- 146 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK---------------- 146 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC----------------
Confidence 9999999 999999998765 799999999999999999999999999999999999997654
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH-
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH- 326 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~- 326 (411)
..++|+|||.+...... ....|+..|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 147 ----------~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~ 215 (267)
T PHA03390 147 ----------DRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD 215 (267)
T ss_pred ----------CeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh
Confidence 15678888877654332 234688999999999998999999999999999999999999985543321
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-HHHHHhcCCCCc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-MRAVWKLLRLPV 382 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-~~~il~~~~~~~ 382 (411)
...+.... ..+.......+..+.++|.+||+.+ |.+|++ ++++++|+||.+
T Consensus 216 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~----p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 216 LESLLKRQ-QKKLPFIKNVSKNANDFVQSMLKYN----INYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred HHHHHHhh-cccCCcccccCHHHHHHHHHHhccC----hhhCCchHHHHhcCCcccC
Confidence 12222211 2222333467889999999999999 999985 799999999975
No 233
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.1e-41 Score=323.14 Aligned_cols=268 Identities=31% Similarity=0.455 Sum_probs=212.9
Q ss_pred CccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee
Q 015222 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~ 163 (411)
..+.++|++.+.||+|+||.||+|.+..+++.||+|.+... ......+.+|+.+++++ +|+|+ +++++++.
T Consensus 3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----~~~~~~~~ 77 (337)
T cd07852 3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNI-----VKLLNVIK 77 (337)
T ss_pred chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCc-----cceeeeec
Confidence 34668899999999999999999999999999999988532 23345567899999999 88877 99999876
Q ss_pred c--CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 164 Y--RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 164 ~--~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
. ....|+||||++++|.+++... .+++..+..++.||+.||.|||+.||+|+||||+||+++.++
T Consensus 78 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~---------- 144 (337)
T cd07852 78 AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC---------- 144 (337)
T ss_pred cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC----------
Confidence 4 3478999999977999988764 588999999999999999999999999999999999998877
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCC--------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHH
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ell 312 (411)
.++|+|||.+...... .....||..|+|||++.+. .++.++|||||||++|+|+
T Consensus 145 -----------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~ 207 (337)
T cd07852 145 -----------------RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEML 207 (337)
T ss_pred -----------------cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHH
Confidence 4566666655433211 1224688999999988664 6789999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCh---------------------------hHHHhhhhhhhhhhccCCccCCCCCC
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLPH---------------------------HMVIRADRRAEKYFRRGARLDWPDGA 365 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p~---------------------------~~~~~~~~~~~~li~~~l~~~~~~rp 365 (411)
+|+.||.+....+....+....+..+. ...+..+..+.+++.+|++.+ |
T Consensus 208 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----P 283 (337)
T cd07852 208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFN----P 283 (337)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCC----c
Confidence 999999887766655554443332221 111234667889999998888 9
Q ss_pred CcHHHHHHHHhcCCCCcccccCCCCCchh
Q 015222 366 TSRDSMRAVWKLLRLPVIDLYSASPNCLC 394 (411)
Q Consensus 366 ~~R~t~~~il~~~~~~~~~~~~~~~~~~~ 394 (411)
++||++.++++|+|+.+.......+....
T Consensus 284 ~~Rps~~~il~~~~~~~~~~~~~~~~~~~ 312 (337)
T cd07852 284 NKRLTAEEALEHPYVAQFHNPSDEPVLPY 312 (337)
T ss_pred ccccCHHHHhhChhhhhhccCCCCCCCCC
Confidence 99999999999999998876655554433
No 234
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.2e-41 Score=314.90 Aligned_cols=255 Identities=24% Similarity=0.369 Sum_probs=209.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
.|...+.||+|++|.||++.+..+++.||+|+++... ...+.+.+|+.+++.+.|+++ +++++++...+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----v~~~~~~~~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI-----VEMYSSYLVGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCCh-----heEEEEEEcCCeEEEE
Confidence 4666789999999999999999999999999986433 334567889999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+||+ +++|.+++... .+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 95 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~------------------- 152 (285)
T cd06648 95 MEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG------------------- 152 (285)
T ss_pred EeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC-------------------
Confidence 9999 99999998873 589999999999999999999999999999999999998776
Q ss_pred cccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~ 327 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...+..+..
T Consensus 153 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~ 224 (285)
T cd06648 153 --------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM 224 (285)
T ss_pred --------cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence 5566666655432221 12246889999999998888999999999999999999999999877766665
Q ss_pred HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 328 ~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
..+......... .....+..+.+++.+|+..+ |.+||++.++++|+|+.+.....
T Consensus 225 ~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 225 KRIRDNLPPKLK-NLHKVSPRLRSFLDRMLVRD----PAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred HHHHhcCCCCCc-ccccCCHHHHHHHHHHcccC----hhhCcCHHHHccCcccccCCCcc
Confidence 555443221111 11235678999999999888 99999999999999999876543
No 235
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.6e-41 Score=309.44 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=200.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.+.||+|+||.||+|..+. +..+|+|.+.........+.+|+.+++++.|+++ +++++++...+..++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~iv 77 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKL-----VQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCc-----eeEEEEEccCCCEEEE
Confidence 468999999999999999998754 4579999987655556778899999999988877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+|+||||+||+++.++
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~------------------- 137 (256)
T cd05114 78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG------------------- 137 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC-------------------
Confidence 9999 899999987644 2589999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||++.+..++.++||||||+++|||++ |+.||...+..+
T Consensus 138 --------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05114 138 --------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYE 209 (256)
T ss_pred --------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 45666666655432111 11234568999999998899999999999999999999 999998887777
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+..+.+......+ ...+..+.+++.+|+..+ |.+||++.++++.
T Consensus 210 ~~~~i~~~~~~~~~---~~~~~~~~~li~~c~~~~----p~~Rps~~~l~~~ 254 (256)
T cd05114 210 VVEMISRGFRLYRP---KLASMTVYEVMYSCWHEK----PEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHCCCCCCCC---CCCCHHHHHHHHHHccCC----cccCcCHHHHHHh
Confidence 76666553322111 224567888999987777 9999999999864
No 236
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-42 Score=299.73 Aligned_cols=249 Identities=22% Similarity=0.270 Sum_probs=198.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-----
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----- 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----- 164 (411)
++||+|.++||+|||+-||+++...+++.+|+|.+.... +..+..++|++..++++|+|+ ++++++...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~v-----l~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNV-----LRLVDHQLREEKDG 94 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcch-----HHHHHHHHHhhccC
Confidence 469999999999999999999999999999999987544 677888999999999999887 888876543
Q ss_pred CCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dikp~NIli~~~~~~~l~df~ 239 (411)
....||+++|. .|+|.+.+... ++..+++.++..|+.+|++||++||+.. ++||||||.|||+.+.+
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~-------- 166 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSG-------- 166 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCC--------
Confidence 34699999999 99999998743 3346999999999999999999999998 99999999999997765
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCC------------CcccccCCCccccceecCC---CCCccchhHHH
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD------------HSYVVSTRHYRAPEVILGL---GWNYPCDLWSV 304 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSl 304 (411)
.++|.|||+++...-. ......|..|+|||.+.-. ..+.++|||||
T Consensus 167 -------------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSL 227 (302)
T KOG2345|consen 167 -------------------LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSL 227 (302)
T ss_pred -------------------ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhh
Confidence 6788888877643211 1123578999999999744 57899999999
Q ss_pred HHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 305 GCILVELCSGEALFQTHEN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 305 Gvil~elltg~~pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||+||+|+.|..||+..-. ....-.+......+|..- .+++.+.++|+.||+.| |.+||++.+++.+
T Consensus 228 GCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvd----P~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 228 GCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVD----PNQRPTIPELLSK 296 (302)
T ss_pred hHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCC----cccCCCHHHHHHH
Confidence 9999999999999953111 000111122223344432 37888999999999999 8888888888865
No 237
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-42 Score=299.19 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=208.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
++.+++..||.|+-|+||+++.+.+|...|||.+.+.. +..+.+...+.++..-. ..|.||+.+++|..+..++
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~----dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH----DCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc----CCCeeeeeeeEEeeCchHH
Confidence 34567889999999999999999999999999997543 33445555666554432 2356699999999999999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+.||.|+..+..++.+.. ..++|..+-++...++.||.||-++ ||+|||+||+|||++..|
T Consensus 168 IcMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G----------------- 229 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG----------------- 229 (391)
T ss_pred HHHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC-----------------
Confidence 999999777777776654 5799999999999999999999975 899999999999998877
Q ss_pred CccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC---CCCccchhHHHHHHHHHHHhCCCCCCCC-C
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQTH-E 322 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~pf~~~-~ 322 (411)
++||||||++...... .+...|-+.|||||.+.-. .|+..+||||||++|+||.||+.||.+. .
T Consensus 230 ----------niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t 299 (391)
T KOG0983|consen 230 ----------NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT 299 (391)
T ss_pred ----------CEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc
Confidence 7899999988765433 3446899999999999744 6899999999999999999999999985 4
Q ss_pred hHHHHHHHHHHhCC-CChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 323 NLEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 323 ~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
+.+.+.++.+..++ +|.. ...+..+.+|+..||.+| +.+||...++++|+|+..-..
T Consensus 300 dFe~ltkvln~ePP~L~~~--~gFSp~F~~fv~~CL~kd----~r~RP~Y~~Ll~h~Fi~~ye~ 357 (391)
T KOG0983|consen 300 DFEVLTKVLNEEPPLLPGH--MGFSPDFQSFVKDCLTKD----HRKRPKYNKLLEHPFIKRYET 357 (391)
T ss_pred cHHHHHHHHhcCCCCCCcc--cCcCHHHHHHHHHHhhcC----cccCcchHHHhcCcceeecch
Confidence 56777776664332 2222 237888999999999999 889999999999999986543
No 238
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.2e-41 Score=317.19 Aligned_cols=256 Identities=30% Similarity=0.496 Sum_probs=207.8
Q ss_pred CccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
+...++|++.+.||+|+||.||+|.++.+++.||+|+++... .....+.+|+.++++++|+|+ +++++++.+
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----~~~~~~~~~ 77 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI-----VNLKEIVTD 77 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCe-----eeeeheecC
Confidence 345578999999999999999999999999999999997432 233456789999999988877 999888765
Q ss_pred CC----------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 165 RN----------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 165 ~~----------~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
.. .+++||||++++|.+++.... ..+++..+..++.||+.||+|||+.||+|+||||+||++++++
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--- 153 (302)
T cd07864 78 KQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKG--- 153 (302)
T ss_pred cchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC---
Confidence 44 899999999778888887653 3689999999999999999999999999999999999998766
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCC-CCCccchhHHHHHHHH
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILV 309 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~ 309 (411)
.+||+|||.+....... ....++..|+|||++.+. .++.++|||||||++|
T Consensus 154 ------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~ 209 (302)
T cd07864 154 ------------------------QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILG 209 (302)
T ss_pred ------------------------cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHH
Confidence 56666666665432221 123457789999988754 5789999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhH--------------------------HHhhhhhhhhhhccCCccCCCC
Q 015222 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHM--------------------------VIRADRRAEKYFRRGARLDWPD 363 (411)
Q Consensus 310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~--------------------------~~~~~~~~~~li~~~l~~~~~~ 363 (411)
||++|+.||...+..+.+..+.+..+..+... ....+..+.+++.+||..+
T Consensus 210 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--- 286 (302)
T cd07864 210 ELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLD--- 286 (302)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCC---
Confidence 99999999998887777777766544322211 1234678899999999888
Q ss_pred CCCcHHHHHHHHhcCCC
Q 015222 364 GATSRDSMRAVWKLLRL 380 (411)
Q Consensus 364 rp~~R~t~~~il~~~~~ 380 (411)
|++||++.+++.|+||
T Consensus 287 -P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 287 -PSKRCTAEEALNSPWL 302 (302)
T ss_pred -hhhCCCHHHHhcCCCC
Confidence 9999999999999997
No 239
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.8e-41 Score=316.64 Aligned_cols=247 Identities=19% Similarity=0.269 Sum_probs=202.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
++|.+.+.||+|+||.||+|.+.. +++.||||+++.... ..+.+.+|+++++.+.|+++ +++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~ 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-----VKFYGVCTE 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-----hheeeEEec
Confidence 468999999999999999998753 357899999975432 35678899999999988877 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNS------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
.+..++||||+ +++|.+++...+ ...+++..+..++.||+.||.|||++|++||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL 159 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence 99999999999 999999997643 13578899999999999999999999999999999999998776
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
.++|+|||++...... .....+++.|+|||++.+..++.++|||||||
T Consensus 160 ---------------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 212 (280)
T cd05049 160 ---------------------------VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGV 212 (280)
T ss_pred ---------------------------eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHH
Confidence 4566666655432211 12234577899999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
++|||++ |..||.+.+..+....+.......+ ....+..+.+++.+|+..+ |.+||++.++++.
T Consensus 213 il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~----p~~Rp~~~eil~~ 277 (280)
T cd05049 213 VLWEIFTYGKQPWYGLSNEEVIECITQGRLLQR---PRTCPSEVYDIMLGCWKRD----PQQRINIKDIHER 277 (280)
T ss_pred HHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHcCCC----cccCCCHHHHHHH
Confidence 9999998 9999988777776666554332222 2346778999999998888 9999999999865
No 240
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.2e-41 Score=312.81 Aligned_cols=253 Identities=20% Similarity=0.276 Sum_probs=195.2
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
.||+|+||.||+|.+..+++.||+|++.... ........|..+++.+.+. .|++++.+++.+...+..++||||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~v~e~ 78 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDL 78 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC--CCCcEeeeeeeeecCCEEEEEEec
Confidence 4799999999999999999999999986432 1122334455555544432 346669999999999999999999
Q ss_pred C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcccc
Q 015222 175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253 (411)
Q Consensus 175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~ 253 (411)
+ |++|.+++.... .+++..++.++.|++.||.|||+.+|+||||||+||+++.++
T Consensus 79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~---------------------- 134 (278)
T cd05606 79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG---------------------- 134 (278)
T ss_pred CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC----------------------
Confidence 9 999999887654 699999999999999999999999999999999999997766
Q ss_pred CCCCCCeeEeecCCcccccC-CCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 254 LPKSSAIKLIDFGSTTFEHQ-DHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 254 ~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||++..... ......|+..|+|||++.++ .++.++||||+||++|+|++|+.||.+...........
T Consensus 135 -----~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~ 209 (278)
T cd05606 135 -----HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR 209 (278)
T ss_pred -----CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH
Confidence 466777776653322 22335789999999999755 68999999999999999999999998763222111111
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~ 387 (411)
. ....+..+....+..+.+++.+||..+ |..|+ ++.++++|+||..+.+..
T Consensus 210 ~-~~~~~~~~~~~~s~~~~~li~~~l~~~----p~~R~~~~~~~~~~ll~~~~~~~~~~~~ 265 (278)
T cd05606 210 M-TLTMAVELPDSFSPELRSLLEGLLQRD----VNRRLGCLGRGAQEVKEHPFFRSLDWQM 265 (278)
T ss_pred H-hhccCCCCCCcCCHHHHHHHHHHhhcC----HHhccCCCCCCHHHHHhCccccCCCchH
Confidence 1 111122223345788999999999999 77777 999999999999877544
No 241
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.7e-41 Score=309.69 Aligned_cols=248 Identities=25% Similarity=0.410 Sum_probs=204.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
+|+..+.||+|+||.||+|.+..+++.||+|.+.... ...+.+.+|+.+++.++|+++ +++++++...+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-----VQYLGTEREED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-----hheeeeEecCC
Confidence 5788899999999999999999899999999986432 244667889999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.++++|||+ +++|.+++.+.. .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~-------------- 139 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG-------------- 139 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--------------
Confidence 999999999 889999998764 689999999999999999999999999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCC-CCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG-WNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.+||+|||.+...... .....|+..|+|||.+.... ++.++|+|||||++|+|++|+.||....
T Consensus 140 -------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 140 -------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred -------------CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 5677777766543322 23356889999999998776 8999999999999999999999998766
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..+....+... ... .......+..+.+++.+|+..+ |..||++.+++.|+|+
T Consensus 207 ~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 207 GVAAVFKIGRS-KEL-PPIPDHLSDEAKDFILKCLQRD----PSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHHHHHhc-ccC-CCcCCCcCHHHHHHHHHHhhcC----cccCcCHHHHhcCCCC
Confidence 54444433321 111 1223446678899999998888 9999999999999996
No 242
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1e-40 Score=308.29 Aligned_cols=249 Identities=23% Similarity=0.390 Sum_probs=206.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCe
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNH 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~ 167 (411)
+|++.+.||.|+||.||+|.+..+++.||+|++... ....+.+..|+++++.+.|+++ +++++++.. +..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI-----VRYYDRIIDRSNQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcc-----ceeeeeeecCCCCE
Confidence 589999999999999999999999999999998643 2344567789999999988877 999887653 467
Q ss_pred EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCcEEEecCcccccCCcc
Q 015222 168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMH-----ELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH-----~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
.+++|||+ +++|.+++... ....+++..++.++.||+.||.||| +.+|+|+||||+||+++.++
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~-------- 147 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANN-------- 147 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCC--------
Confidence 89999999 89999998753 2346899999999999999999999 89999999999999998766
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
.++|+|||++....... ....|+..|+|||++.+..++.++||||||+++|+|++|+.
T Consensus 148 -------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 208 (265)
T cd08217 148 -------------------NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSP 208 (265)
T ss_pred -------------------CEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 56777777666543322 23468999999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
||...+..+....+..... ..+....+..+.+++.+|+..+ |.+||+++++++|||+
T Consensus 209 p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~----p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 209 PFTARNQLQLASKIKEGKF---RRIPYRYSSELNEVIKSMLNVD----PDKRPSTEELLQLPLI 265 (265)
T ss_pred cccCcCHHHHHHHHhcCCC---CCCccccCHHHHHHHHHHccCC----cccCCCHHHHhhCCCC
Confidence 9988775555554443321 2233456778999999999988 9999999999999996
No 243
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.2e-41 Score=317.59 Aligned_cols=261 Identities=25% Similarity=0.374 Sum_probs=211.6
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc-hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.++|++.+.||+|+||.||++.+..++..||+|.+... ....+.+.+|+.+++.+.|+++ +++++.+...+..|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~ 92 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI-----VNYLDSYLVGDELW 92 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCe-----eehhheeeeCCcEE
Confidence 36899999999999999999999989999999998643 2334667889999998888776 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+|+||+ +++|.+++.+. .+++..+..++.|++.||.|||++|++|+||||+||+++.++
T Consensus 93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~----------------- 152 (293)
T cd06647 93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG----------------- 152 (293)
T ss_pred EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC-----------------
Confidence 999999 99999998765 488999999999999999999999999999999999997766
Q ss_pred CccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....|++.|+|||.+.+..++.++|||||||++|+|++|+.||...+..+
T Consensus 153 ----------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~ 222 (293)
T cd06647 153 ----------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR 222 (293)
T ss_pred ----------CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 5667777765433221 123468889999999988889999999999999999999999998766544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCCCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSASPN 391 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~~~~ 391 (411)
.+..+... +..........+..+.+++.+|+..+ |..||++.+++.|+||......+..|-
T Consensus 223 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~----p~~Rp~~~~il~h~~~~~~~~~~~~~~ 283 (293)
T cd06647 223 ALYLIATN-GTPELQNPEKLSAIFRDFLNRCLEMD----VEKRGSAKELLQHPFLKIAKPLSSLTP 283 (293)
T ss_pred heeehhcC-CCCCCCCccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCHHHhcCcccccccc
Confidence 43332221 11111122345667889999998888 999999999999999998776555443
No 244
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-41 Score=312.02 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=205.6
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||.|+||.||+|++..+++.||+|++.... ...+.+.+|+.+++++.|+|+ +++++.+..++..|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-----VKLYYSFQGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch-----hHHHHheecCcEEEEEEecC
Confidence 689999999999999999999999986533 345667889999999988877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.+.. .+++..+..++.||+.||.|||++|++|+||+|+||+++.++
T Consensus 76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~----------------------- 130 (265)
T cd05579 76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG----------------------- 130 (265)
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC-----------------------
Confidence 889999998765 699999999999999999999999999999999999998777
Q ss_pred CCCCCeeEeecCCcccccCC-----------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 255 PKSSAIKLIDFGSTTFEHQD-----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++...... .....++..|+|||.+.+...+.++||||||+++|+|++|..||.....
T Consensus 131 ----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 206 (265)
T cd05579 131 ----HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP 206 (265)
T ss_pred ----CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 4566666655432211 1234678899999999888899999999999999999999999988777
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH---HHHHhcCCCCcccc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM---RAVWKLLRLPVIDL 385 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~---~~il~~~~~~~~~~ 385 (411)
.+....+.......+... ..+..+.+++.+|++.+ |.+||++ .++++|+||.+++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~~l~~~----p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 207 EEIFQNILNGKIEWPEDV--EVSDEAIDLISKLLVPD----PEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred HHHHHHHhcCCcCCCccc--cCCHHHHHHHHHHhcCC----HhhcCCCccHHHHhcCccccCCCC
Confidence 766666555333333321 24778899999999888 9999999 99999999998765
No 245
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=6e-41 Score=312.79 Aligned_cols=270 Identities=23% Similarity=0.318 Sum_probs=215.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~ 166 (411)
++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++++. |+|+ +++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI-----IKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCc-----hhHHHHhcCCc
Confidence 4699999999999999999999999999999998752 233456778999999987 7666 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..++|||++ +++|.+++.+.. .+++..+..++.|++.||.|||+.|++|+||||+||+++.+|.++++|||+.....
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999 999999998765 69999999999999999999999999999999999999998877777777655443
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.......... ....++..............|+..|+|||++.+..++.++||||||+++++|++|+.||...+...
T Consensus 154 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 154 PNSSPESNKG----DATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred CccccccCCC----CCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 3221100000 000111111111122233567899999999988889999999999999999999999999877666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH----HHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM----RAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~----~~il~~~~~ 380 (411)
.+..+......++.. ++..+.+++.+||..+ |.+||++ +++++|+||
T Consensus 230 ~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~----p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 230 TFQKILKLEYSFPPN----FPPDAKDLIEKLLVLD----PQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHhcCCCCCCc----cCHHHHHHHHHHhcCC----HhhCCCcccCHHHHhcCCCC
Confidence 666655544455543 4677899999999988 8899999 999999997
No 246
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.8e-41 Score=313.43 Aligned_cols=255 Identities=20% Similarity=0.300 Sum_probs=201.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
.++|++.+.||+|+||.||+|.++. .+..||+|.+.... .....+.+|+.+++.+.|+++ +++++++.
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~ 79 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV-----VRLLGVVS 79 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEc
Confidence 4689999999999999999997653 34579999986433 233456789999999988776 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
..+..|+||||+ +++|.+++.+.. ...++...+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~--- 156 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--- 156 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCC---
Confidence 889999999999 999999997532 12346778899999999999999999999999999999998766
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
.++|+|||+++...... ....++..|+|||.+.+..++.++|||||||++|
T Consensus 157 ------------------------~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~ 212 (288)
T cd05061 157 ------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLW 212 (288)
T ss_pred ------------------------cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHH
Confidence 56677777665332211 1124567799999999889999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHHh-CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh------cCCCC
Q 015222 310 ELCS-GEALFQTHENLEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK------LLRLP 381 (411)
Q Consensus 310 ellt-g~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~------~~~~~ 381 (411)
||++ |..||.+.+..+....+.... ...+ ...+..+.+++.+|++.+ |.+||++.++++ |+||.
T Consensus 213 el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~----p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 213 EITSLAEQPYQGLSNEQVLKFVMDGGYLDQP----DNCPERVTDLMRMCWQFN----PKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCC----hhHCcCHHHHHHHHHhhcCCCCC
Confidence 9998 899998877666555443321 1122 234678999999999999 777777877776 89999
Q ss_pred cccc
Q 015222 382 VIDL 385 (411)
Q Consensus 382 ~~~~ 385 (411)
++++
T Consensus 285 ~~~~ 288 (288)
T cd05061 285 EVSF 288 (288)
T ss_pred CCCC
Confidence 8875
No 247
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.8e-41 Score=309.08 Aligned_cols=250 Identities=24% Similarity=0.363 Sum_probs=207.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|+||.||+|.++.++..||+|.+.... ...+.+.+|+.+++.++|+++ +++++.+...+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i-----~~~~~~~~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI-----VTFFASFQENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh-----hhhhheeccCCeEE
Confidence 5899999999999999999999999999999986432 344567789999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+|+||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~---------------- 139 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM---------------- 139 (257)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC----------------
Confidence 999999 999999998765456899999999999999999999999999999999999976542
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 140 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 209 (257)
T cd08225 140 ----------VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ 209 (257)
T ss_pred ----------eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 35777777765543322 22468889999999988889999999999999999999999998766555
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+... .. .......+..+.+++.+|+..+ |++||++.++++|+||
T Consensus 210 ~~~~~~~~--~~-~~~~~~~~~~~~~~i~~~l~~~----p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 210 LVLKICQG--YF-APISPNFSRDLRSLISQLFKVS----PRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHhcc--cC-CCCCCCCCHHHHHHHHHHhccC----hhhCcCHHHHhhCCCC
Confidence 44333221 11 1122345677999999998888 9999999999999997
No 248
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.8e-41 Score=346.96 Aligned_cols=262 Identities=18% Similarity=0.230 Sum_probs=193.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.++||+|+||.||+|++..+++.||||+++.. ....+.+.+|+.+++++.|+|+ +++++++.+++.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNI-----Vkl~~v~~d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGI-----VPVYSICSDGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCc-----CeEEEEEeeCCE
Confidence 5899999999999999999999999999999998743 2335668889999999988887 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~d 237 (411)
.|+||||+ |++|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||++.+|.++++|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence 99999999 999999986421 12356678899999999999999999999999999999999888777777
Q ss_pred cccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 238 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
||++........... ......-+............+||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 157 FGLAk~i~~~~~~~~------~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 157 WGAAIFKKLEEEDLL------DIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred cCcceeccccccccc------ccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 766544321110000 00000000000000111235799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCC
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGA 365 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp 365 (411)
|...+....... .....+........++..+.+++.+||..+|.+|+
T Consensus 231 F~~~~~~ki~~~-~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ 277 (932)
T PRK13184 231 YRRKKGRKISYR-DVILSPIEVAPYREIPPFLSQIAMKALAVDPAERY 277 (932)
T ss_pred CCCcchhhhhhh-hhccChhhccccccCCHHHHHHHHHHccCChhhCc
Confidence 987544332221 11111111111235677789999999999944443
No 249
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.2e-41 Score=312.93 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=204.2
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
.++|++.+.||+|+||.||+|.+.. ++..||+|.+.... .....+.+|+.+++.+.|+++ +++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~ 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI-----VRLIGVSF 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEc
Confidence 3579999999999999999999987 77889999986432 334567889999999988776 99999998
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~d 237 (411)
+.+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|++||||||+||+++.++
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~------ 153 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG------ 153 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC------
Confidence 888999999999 9999999976531 2589999999999999999999999999999999999998654
Q ss_pred cccccccCCCCCccccCCCCCCeeEeecCCcccccCCCc-----ccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 238 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
....++|+|||++........ ...++..|+|||++.+..++.++|||||||++|||+
T Consensus 154 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 215 (277)
T cd05036 154 ------------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF 215 (277)
T ss_pred ------------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence 223578888888775432211 123356799999999889999999999999999999
Q ss_pred h-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+ |..||.+.+..+....+..... .......+..+.+++.+|++.+ |+.||++.++++|.
T Consensus 216 ~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~cl~~~----p~~Rps~~~vl~~l 275 (277)
T cd05036 216 SLGYMPYPGRTNQEVMEFVTGGGR---LDPPKGCPGPVYRIMTDCWQHT----PEDRPNFATILERI 275 (277)
T ss_pred cCCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHh
Confidence 7 9999988776665544433211 1122345677889999999888 99999999999875
No 250
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.7e-41 Score=310.22 Aligned_cols=246 Identities=24% Similarity=0.331 Sum_probs=199.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.++|++.++||+|+||.||+|.+..++ .||+|+++......+.+.+|+++++++.|+++ +++++.+. .+..++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~-~~~~~l 77 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVS-EEPIYI 77 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCc-----ceEEEEEC-CCCcEE
Confidence 367999999999999999999887664 59999998655555678899999999988877 88888775 456899
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.+.....+++..+..++.|++.||+|||+.||+|+||||+||+++.++
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~------------------ 139 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL------------------ 139 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC------------------
Confidence 99999 88999999875444689999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCCCc----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.++|+|||.+........ ...++..|+|||+..+..++.++|||||||++|+|++ |..||.+....
T Consensus 140 ---------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~ 210 (262)
T cd05071 140 ---------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 210 (262)
T ss_pred ---------cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH
Confidence 466677776654332221 2245678999999988899999999999999999999 89999887766
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+....+.... .. ......+..+.+++.+|++.+ |++||++.++++.
T Consensus 211 ~~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~~----p~~Rp~~~~~~~~ 256 (262)
T cd05071 211 EVLDQVERGY-RM--PCPPECPESLHDLMCQCWRKE----PEERPTFEYLQAF 256 (262)
T ss_pred HHHHHHhcCC-CC--CCccccCHHHHHHHHHHccCC----cccCCCHHHHHHH
Confidence 6555544321 11 123456778899999999988 8888899988754
No 251
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.3e-40 Score=312.40 Aligned_cols=259 Identities=22% Similarity=0.327 Sum_probs=204.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~ 167 (411)
++|++.+.||.|++|.||+|.+..+++.||+|.+.... .....+.+|+++++++.|+|| +++++++.. .+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 75 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI-----VKYYGAFLDESSSS 75 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEEccCCCe
Confidence 46999999999999999999999999999999987533 345678899999999988877 999998754 347
Q ss_pred EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+|+||||+ +++|.+++... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~------------- 142 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG------------- 142 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC-------------
Confidence 89999999 89999887642 234689999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCC-
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHE- 322 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~- 322 (411)
.++|+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++|..||....
T Consensus 143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 208 (287)
T cd06621 143 --------------QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGE 208 (287)
T ss_pred --------------eEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccC
Confidence 5677777776543322 123457888999999998899999999999999999999999997652
Q ss_pred ----hHHHHHHHHHHhC-CCChhHH--HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 323 ----NLEHLAMMERVLG-PLPHHMV--IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 323 ----~~~~~~~i~~~~~-~~p~~~~--~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
..+....+..... .++.... ..+++.+.+++.+|+..+ |++|||+.++++|+|+.+....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~eil~~~~~~~~~~~ 275 (287)
T cd06621 209 PPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKD----PTRRPTPWDMLEHPWIKAQMKK 275 (287)
T ss_pred CCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCC----cccCCCHHHHHhCccccccccc
Confidence 1222222222111 1111110 123567889999998888 9999999999999999776544
No 252
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-40 Score=308.34 Aligned_cols=247 Identities=21% Similarity=0.332 Sum_probs=202.6
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.++|++.+.||+|+||.||+|.+.. ++.||+|.++......+.+.+|+.+++++.|+++ +++++++...+..++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l 78 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKL-----IQLYAVCTLEEPIYI 78 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCc-----cceeEEEecCCCeee
Confidence 3679999999999999999998754 5679999998665556778899999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~------------------ 140 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN------------------ 140 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC------------------
Confidence 99999 99999999876545789999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC-cc---cccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH-SY---VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~---~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.++|+|||++....... .. ...+..|+|||.+.+..++.++||||||+++|||++ |+.||.+.+..
T Consensus 141 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 211 (261)
T cd05068 141 ---------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA 211 (261)
T ss_pred ---------CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 45666666665433211 11 122457999999998899999999999999999999 99999887776
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
..+..+..... .+ .....+..+.+++.+|++.+ |.+||++.++.+.
T Consensus 212 ~~~~~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~----P~~Rp~~~~l~~~ 257 (261)
T cd05068 212 EVLQQVDQGYR-MP--CPPGCPKELYDIMLDCWKED----PDDRPTFETLQWK 257 (261)
T ss_pred HHHHHHHcCCC-CC--CCCcCCHHHHHHHHHHhhcC----cccCCCHHHHHHH
Confidence 66655543321 11 12345678899999999888 9999999998764
No 253
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=7.4e-41 Score=312.80 Aligned_cols=250 Identities=32% Similarity=0.540 Sum_probs=208.1
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
|++.+.||.|++|.||+|.+..+++.+|+|.+.... .....+.+|+.++++++|+++ +++++++.+++..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI-----IKLLDVFRHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCc-----chHHHhhccCCCEEE
Confidence 678899999999999999999999999999986533 234667889999999988877 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++
T Consensus 76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~------------------- 135 (283)
T cd05118 76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG------------------- 135 (283)
T ss_pred EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC-------------------
Confidence 99999779999888754 4699999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||.+....... ....++..|+|||.+.+. .++.++||||||+++|+|++|+.||.+.+..+.
T Consensus 136 --------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~ 207 (283)
T cd05118 136 --------VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ 207 (283)
T ss_pred --------cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 56777777665543322 224578889999999877 789999999999999999999999988877666
Q ss_pred HHHHHHHhCCCC--------------------------hhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 327 LAMMERVLGPLP--------------------------HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 327 ~~~i~~~~~~~p--------------------------~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+..+....+... .......+..+.++|.+|+..+ |.+||++.+++.|+||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 208 LFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYD----PHKRITAEQALAHPYF 283 (283)
T ss_pred HHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccC----cccCcCHHHHhhCCCC
Confidence 555544322211 1223346778999999999988 9999999999999997
No 254
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-43 Score=329.20 Aligned_cols=260 Identities=25% Similarity=0.380 Sum_probs=223.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.+++++..||-|+||.|-++........+|+|++++.. ...+.+..|-.||.....+.| |++|..|.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fI-----vrLYrTfrd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFI-----VRLYRTFRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHH-----HHHHHHhccchh
Confidence 46778889999999999999877666678999998643 456777889999999887766 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+.||-| ||.|+..|++++ .|.+..++.++..++.|++|||++|||+|||||+|+|++.+|+
T Consensus 495 vYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy-------------- 558 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGY-------------- 558 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCc--------------
Confidence 99999999 999999999887 7999999999999999999999999999999999999998885
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
+||.|||+|+...... -+++|||.|.|||++.+...+.++|.||||+++|||++|.+||.+.+..
T Consensus 559 -------------~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm 625 (732)
T KOG0614|consen 559 -------------LKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM 625 (732)
T ss_pred -------------eEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH
Confidence 5677777776654443 4589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH-----HHHHHhcCCCCcccccCCCCC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS-----MRAVWKLLRLPVIDLYSASPN 391 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t-----~~~il~~~~~~~~~~~~~~~~ 391 (411)
..+..|.++...+ +++..+...+.++++++-+.+ |++|.. +.+|.+|.||.+.+|......
T Consensus 626 ktYn~ILkGid~i--~~Pr~I~k~a~~Lik~LCr~~----P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 626 KTYNLILKGIDKI--EFPRRITKTATDLIKKLCRDN----PTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred HHHHHHHhhhhhh--hcccccchhHHHHHHHHHhcC----cHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 9998888765432 233456677888888887777 777765 899999999999998765443
No 255
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.2e-40 Score=315.80 Aligned_cols=267 Identities=23% Similarity=0.387 Sum_probs=204.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec---
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--- 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--- 164 (411)
.++|++.++||+|+||.||+|.++.+++.||||++.... .......+|+++++.++|+++ +++++++..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~ 81 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNV-----VPLIDMAVERPD 81 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCc-----cchhhheecccc
Confidence 478999999999999999999999999999999986432 223456789999999998888 888877643
Q ss_pred -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
...+++||||++++|.+.+.... ..+++..+..++.||++||.|||++||+|+||||+||++++++.++++|||
T Consensus 82 ~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 82 KSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred cccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCc
Confidence 33579999999888888877543 369999999999999999999999999999999999999988876666666
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf 318 (411)
++.......... ..+. ...........|++.|+|||.+.+. .++.++|||||||++|||++|++||
T Consensus 161 ~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 161 LARPYDGPPPNP------------KGGG-GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred cchhccCCCccc------------ccCC-cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 554332211100 0000 0000111234678899999988764 5899999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhCCCChhH--------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 319 QTHENLEHLAMMERVLGPLPHHM--------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~--------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
.+.+.......+....+..++.. .......+.++|.+||..+ |.+|||+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~t~~ 303 (311)
T cd07866 228 QGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLD----PYKRLTAS 303 (311)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccC----cccCcCHH
Confidence 98887776666655433222111 1123356779999999999 99999999
Q ss_pred HHHhcCCC
Q 015222 373 AVWKLLRL 380 (411)
Q Consensus 373 ~il~~~~~ 380 (411)
+++.|+||
T Consensus 304 ell~~~~f 311 (311)
T cd07866 304 DALEHPYF 311 (311)
T ss_pred HHhcCCCC
Confidence 99999997
No 256
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.5e-41 Score=318.94 Aligned_cols=253 Identities=21% Similarity=0.352 Sum_probs=207.7
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
|....+||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.|+|+ +++++.+..++..++||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNV-----VEMYKSYLVGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCch-----hhhhhheeeCCeEEEEE
Confidence 555668999999999999999999999999986432 334567789999999888777 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++... .+++..+..++.|++.||.|||++||+|+||||+||+++.++
T Consensus 98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~-------------------- 154 (297)
T cd06659 98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG-------------------- 154 (297)
T ss_pred ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--------------------
Confidence 999 88999887653 489999999999999999999999999999999999998766
Q ss_pred ccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++...... .....|+..|+|||++.+..++.++|||||||++|||++|+.||...+..+.+.
T Consensus 155 -------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 227 (297)
T cd06659 155 -------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK 227 (297)
T ss_pred -------cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 5677777766533221 223568899999999998889999999999999999999999998777666555
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.+...... ........+..+.+++.+|+..+ |.+||++.++++|+||.+....
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~----P~~Rps~~~ll~~~~~~~~~~~ 280 (297)
T cd06659 228 RLRDSPPP-KLKNAHKISPVLRDFLERMLTRE----PQERATAQELLDHPFLLQTGLP 280 (297)
T ss_pred HHhccCCC-CccccCCCCHHHHHHHHHHhcCC----cccCcCHHHHhhChhhccCCCc
Confidence 44432211 11222345677899999999888 9999999999999999976643
No 257
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.1e-41 Score=309.08 Aligned_cols=247 Identities=23% Similarity=0.336 Sum_probs=202.5
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..++|+++++||+|+||.||+|..+ +++.||+|.+.......+.+.+|+.+++++.|+++ +++++++. .+..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~~~~~ 76 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRL-----VRLYAVVT-QEPIY 76 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCe-----eeEEEEEc-cCCcE
Confidence 4578999999999999999999865 46779999998766666788899999999988877 88888774 46789
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||++++++
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~----------------- 139 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL----------------- 139 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC-----------------
Confidence 999999 89999999876555789999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
.++|+|||.+....... ....++..|+|||++.+..++.++||||||+++|||++ |+.||.+.+.
T Consensus 140 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 209 (260)
T cd05067 140 ----------CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN 209 (260)
T ss_pred ----------CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh
Confidence 56677777665443111 12345678999999998889999999999999999999 9999988777
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+....+...... ......+..+.+++.+|++.+ |++||+++++++.
T Consensus 210 ~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~ 256 (260)
T cd05067 210 PEVIQNLERGYRM---PRPDNCPEELYELMRLCWKEK----PEERPTFEYLRSV 256 (260)
T ss_pred HHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHccCC----hhhCCCHHHHHHH
Confidence 6666655443221 122345678999999999888 9999999998864
No 258
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3e-40 Score=309.33 Aligned_cols=254 Identities=30% Similarity=0.471 Sum_probs=204.7
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe---
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH--- 167 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~--- 167 (411)
|++.+.||+|+||.||+|+++.+++.||+|+++... .....+.+|+.+++++. .+.|++++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~--~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLE--SFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhh--ccCCCCcceEEEEEeeccCCCC
Confidence 788999999999999999999889999999997432 22345667888888774 2234455999999987666
Q ss_pred --EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 168 --ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 168 --~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+++|||++++|.+++.......+++..++.++.||+.||.|||+.|++|+||||+||+++.++
T Consensus 79 ~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-------------- 144 (287)
T cd07838 79 LKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-------------- 144 (287)
T ss_pred ceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--------------
Confidence 9999999977999998875544699999999999999999999999999999999999998766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||.+....... ....++..|+|||++.+..++.++|||||||++|+|++|.+||.+.+.
T Consensus 145 -------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~ 211 (287)
T cd07838 145 -------------QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE 211 (287)
T ss_pred -------------CEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence 56777777665543221 223578899999999998999999999999999999999999998887
Q ss_pred HHHHHHHHHHhCC-----------------------CChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 324 LEHLAMMERVLGP-----------------------LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 324 ~~~~~~i~~~~~~-----------------------~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.+.+..+...... .+.......+..+.+++.+|++.+ |.+||++.+++.|+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----p~~Rp~~~~il~~~~~ 287 (287)
T cd07838 212 ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFN----PHKRISAFEALQHPYF 287 (287)
T ss_pred HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccC----CccCCCHHHHhcCcCC
Confidence 7766665443211 112222345677889999999888 9999999999999997
No 259
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6e-41 Score=309.98 Aligned_cols=247 Identities=23% Similarity=0.340 Sum_probs=200.0
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..++|++.++||+|+||.||+|.+. ++..||+|.++......+.+.+|+.++++++|+++ +++++++. .+..+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~-~~~~~ 76 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKL-----VQLYAVVS-EEPIY 76 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCce-----EEEEeEEC-CCCcE
Confidence 3468999999999999999999866 45669999998655556778899999999998877 99988875 45689
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||++++++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~----------------- 139 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL----------------- 139 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc-----------------
Confidence 999999 89999999876545689999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+.
T Consensus 140 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~ 209 (260)
T cd05070 140 ----------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN 209 (260)
T ss_pred ----------eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 45666666665432221 11234567999999988889999999999999999999 9999988777
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+....+.... +.......+..+.+++.+|+..+ |.+|||+.++.+.
T Consensus 210 ~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~l~~~ 256 (260)
T cd05070 210 REVLEQVERGY---RMPCPQDCPISLHELMLQCWKKD----PEERPTFEYLQSF 256 (260)
T ss_pred HHHHHHHHcCC---CCCCCCcCCHHHHHHHHHHcccC----cccCcCHHHHHHH
Confidence 66666554321 11122355678999999999999 8888888888753
No 260
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.1e-41 Score=313.26 Aligned_cols=253 Identities=20% Similarity=0.337 Sum_probs=205.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+.+|+.+++.+.+ ..|++++++++++..+...|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence 488899999999999999999999999999998643 2344567889999999974 234566999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~------------------ 138 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG------------------ 138 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC------------------
Confidence 99999 89999998764 589999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+...... .....|+..|+|||.+.++ .++.++|+|||||++|+|++|..||.+.+...
T Consensus 139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~ 209 (277)
T cd06917 139 ---------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR 209 (277)
T ss_pred ---------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 5677777766544322 2234688899999998754 57899999999999999999999998765544
Q ss_pred HHHHHHHHhCCCChhHHH-hhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 326 HLAMMERVLGPLPHHMVI-RADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~-~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
....+... .+..+.. ..+..+.+++.+|+..+ |.+||++.++++|+|+++..
T Consensus 210 ~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 210 AMMLIPKS---KPPRLEDNGYSKLLREFVAACLDEE----PKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred hhhccccC---CCCCCCcccCCHHHHHHHHHHcCCC----cccCcCHHHHhhChHhhccc
Confidence 33322221 1222222 25678899999998888 99999999999999998755
No 261
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8.5e-41 Score=308.46 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=199.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.+.||+|+||+||+|.+.. +..||+|.++......+.+.+|+.+++++.|+++ +++++++...+..++|
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv 77 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-----VQLYGVCTKQRPIYIV 77 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-----eeEEEEEccCCCcEEE
Confidence 469999999999999999998754 3459999987655556678899999999988776 9999999988899999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||||+||+++.++
T Consensus 78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~------------------- 137 (256)
T cd05113 78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG------------------- 137 (256)
T ss_pred EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-------------------
Confidence 9999 899999998654 2689999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.+||+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+
T Consensus 138 --------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05113 138 --------CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE 209 (256)
T ss_pred --------CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH
Confidence 45666666554332211 11234567999999998889999999999999999999 999998877666
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
....+........ ....+..+.+++.+|+..+ |.+||++.+++++.
T Consensus 210 ~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~----p~~Rp~~~~ll~~~ 255 (256)
T cd05113 210 TVEKVSQGLRLYR---PHLASEKVYAIMYSCWHEK----AEERPTFQQLLSSI 255 (256)
T ss_pred HHHHHhcCCCCCC---CCCCCHHHHHHHHHHcCCC----cccCCCHHHHHHhh
Confidence 6555544332221 1234677889999998888 99999999998753
No 262
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.6e-41 Score=322.35 Aligned_cols=263 Identities=16% Similarity=0.173 Sum_probs=199.6
Q ss_pred eeeccc--cceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G--~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
..||+| +||+||+|.+..+++.||+|++.... ...+.+.+|+.+++.++|+|| ++++++|..++..++||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNI-----MTSWTVFTTGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEeeeEecCCceEEEE
Confidence 456666 99999999999999999999987432 234667889999888888877 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.+.....+++..+..++.||+.||+|||++||+||||||+|||++.++.+++.||+........+
T Consensus 79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~--- 155 (328)
T cd08226 79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNG--- 155 (328)
T ss_pred ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccC---
Confidence 999 8899999987654569999999999999999999999999999999999999988877666665322111100
Q ss_pred ccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
+.............++..|+|||++.+. .++.++|||||||++|+|++|..||.+....+....
T Consensus 156 --------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~ 221 (328)
T cd08226 156 --------------QKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQ 221 (328)
T ss_pred --------------ccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHH
Confidence 0000000011112356679999999774 578999999999999999999999987655443322
Q ss_pred HHHHhCCC-------------------------------------------ChhHHHhhhhhhhhhhccCCccCCCCCCC
Q 015222 330 MERVLGPL-------------------------------------------PHHMVIRADRRAEKYFRRGARLDWPDGAT 366 (411)
Q Consensus 330 i~~~~~~~-------------------------------------------p~~~~~~~~~~~~~li~~~l~~~~~~rp~ 366 (411)
........ ........+..+.+++.+||..+ |.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d----P~ 297 (328)
T cd08226 222 KLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQD----PE 297 (328)
T ss_pred HhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCC----cc
Confidence 22111000 01112235567889999999999 99
Q ss_pred cHHHHHHHHhcCCCCccccc
Q 015222 367 SRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 367 ~R~t~~~il~~~~~~~~~~~ 386 (411)
+|||+.++++|+||.++...
T Consensus 298 ~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 298 KRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred cCCCHHHHhhCHHHHHHHHh
Confidence 99999999999999876653
No 263
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.3e-42 Score=318.42 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=206.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+.|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++++.|+++ +++++.+..++..|
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI-----TRYYGSYLKGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCcc-----HhhhcccccCCceE
Confidence 4578889999999999999999999999999998743 2344567889999999988877 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++
T Consensus 79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~----------------- 138 (277)
T cd06642 79 IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG----------------- 138 (277)
T ss_pred EEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC-----------------
Confidence 999999 89999988653 589999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++....... ....|+..|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 139 ----------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 208 (277)
T cd06642 139 ----------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR 208 (277)
T ss_pred ----------CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh
Confidence 46677777665433221 22467889999999999889999999999999999999999998665544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
....+... .+.......+..+.+++.+|+..+ |+.||++.++++|+|+....
T Consensus 209 ~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 209 VLFLIPKN---SPPTLEGQYSKPFKEFVEACLNKD----PRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred HHhhhhcC---CCCCCCcccCHHHHHHHHHHccCC----cccCcCHHHHHHhHHHHHHh
Confidence 44333221 122223345677889999998888 99999999999999987644
No 264
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9e-41 Score=307.23 Aligned_cols=240 Identities=21% Similarity=0.309 Sum_probs=193.7
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
+.||+|+||.||+|+++.+++.||+|.+... ......+.+|+++++++.|+++ +++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----VRLIGVCTQKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcCCCCeEEEEeec
Confidence 4689999999999999999999999988643 2345678899999999988877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.
T Consensus 76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~---------------------- 132 (252)
T cd05084 76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNV---------------------- 132 (252)
T ss_pred cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCc----------------------
Confidence 899999997654 35899999999999999999999999999999999999987764
Q ss_pred CCCCCeeEeecCCcccccCCCc-----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~ 328 (411)
++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+...
T Consensus 133 -----~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~ 207 (252)
T cd05084 133 -----LKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE 207 (252)
T ss_pred -----EEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH
Confidence 55555555543221110 1122456999999998899999999999999999998 999998766655544
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+.... +.......+..+.+++.+|+..+ |++||++.++++.
T Consensus 208 ~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~~~~~ 249 (252)
T cd05084 208 AIEQGV---RLPCPELCPDAVYRLMERCWEYD----PGQRPSFSTVHQE 249 (252)
T ss_pred HHHcCC---CCCCcccCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 444321 11223345678899999999999 9999999999864
No 265
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.3e-40 Score=309.66 Aligned_cols=251 Identities=29% Similarity=0.517 Sum_probs=204.7
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
|++.+.||+|++|+||+|.+..+++.||||.+..... ......+|+..++++. |+++ +++++++.+++..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI-----VKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCc-----hhHHHHhhcCCcEEE
Confidence 6789999999999999999999999999999865322 2233456888888887 7766 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
||||++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++
T Consensus 76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~------------------- 136 (283)
T cd07830 76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE------------------- 136 (283)
T ss_pred EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC-------------------
Confidence 9999988999998876545789999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHL 327 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~ 327 (411)
.++|+|||.+....... ....++..|+|||++.+. .++.++||||||+++|+|++|+.||...+..+.+
T Consensus 137 --------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~ 208 (283)
T cd07830 137 --------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQL 208 (283)
T ss_pred --------CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHH
Confidence 66777777776543321 234678899999988654 6799999999999999999999999887776666
Q ss_pred HHHHHHhCCCChhH--------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 328 AMMERVLGPLPHHM--------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 328 ~~i~~~~~~~p~~~--------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
..+....+...... ....+..+.+++++|+..+ |.+||++++++.|+||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 209 YKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD----PKKRPTASQALQHPYF 283 (283)
T ss_pred HHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccC----cccCCCHHHHhhCCCC
Confidence 65554443322211 1122466889999998888 9999999999999997
No 266
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.1e-40 Score=307.48 Aligned_cols=244 Identities=21% Similarity=0.312 Sum_probs=199.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee-ecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~l 170 (411)
++|++.+.||+|+||.||++... +..||+|.++... ..+.+.+|+.+++++.|+++ +++++++ ..++..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-hHHHHHHHHHHHHhCCCCCe-----eeEEEEEEcCCCceEE
Confidence 47999999999999999999754 7779999986543 34568889999999988877 9999865 45568999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~------------------ 139 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN------------------ 139 (256)
T ss_pred EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC------------------
Confidence 99999 88999999876645689999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~ 328 (411)
.++|+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |+.||...+..+...
T Consensus 140 ---------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~ 210 (256)
T cd05082 140 ---------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP 210 (256)
T ss_pred ---------cEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 5677777776654433333445678999999998889999999999999999998 999998776666555
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+.+.. +.......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 211 ~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~l~~~ 252 (256)
T cd05082 211 RVEKGY---KMDAPDGCPPVVYDVMKQCWHLD----AATRPSFLQLREQ 252 (256)
T ss_pred HHhcCC---CCCCCCCCCHHHHHHHHHHhcCC----hhhCcCHHHHHHH
Confidence 554322 22223456778899999999888 9999999999864
No 267
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.1e-40 Score=307.67 Aligned_cols=248 Identities=25% Similarity=0.361 Sum_probs=196.9
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
....||+|+||.||+|.+..++..||+|.+.... ...+.+.+|+.+++.++|+|+ +++++++..++..++||||
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNI-----VQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCe-----eeeeeeeccCCEEEEEEec
Confidence 3468999999999999999999999999886543 345678899999999988877 9999999999999999999
Q ss_pred C-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 175 L-GPSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 175 ~-~~~L~~~l~~~~~~~l--~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
+ +++|.+++.... ..+ ++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~--------------------- 144 (268)
T cd06624 87 VPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY--------------------- 144 (268)
T ss_pred CCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC---------------------
Confidence 9 899999998653 234 788899999999999999999999999999999999652
Q ss_pred ccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
...++|+|||.+...... .....|+..|+|||++.+. .++.++||||||+++|+|++|..||........
T Consensus 145 -----~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~ 219 (268)
T cd06624 145 -----SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA 219 (268)
T ss_pred -----CCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh
Confidence 125788888877643221 1224578999999998765 378999999999999999999999976443221
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
........ .....+....++.+.+++.+|+..+ |.+||++.+++.||||
T Consensus 220 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 220 AMFKVGMF-KIHPEIPESLSAEAKNFILRCFEPD----PDKRASAHDLLQDPFL 268 (268)
T ss_pred hHhhhhhh-ccCCCCCcccCHHHHHHHHHHcCCC----chhCCCHHHHHhCCCC
Confidence 11111111 1111223345677899999998888 9999999999999997
No 268
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-40 Score=312.09 Aligned_cols=248 Identities=21% Similarity=0.311 Sum_probs=199.1
Q ss_pred CCeEEEeeeccccceEEEEEEeC----CCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+.|++.+.||+|+||+||+|.+. .++..||+|.+.... .....+.+|+.+++++.|+|+ +++++++..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-----VCLLGVVTQE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCe-----eeEEEEEecC
Confidence 46899999999999999999853 456789999997432 233567889999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNS---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~---------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
+..|+||||+ +++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE 159 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence 9999999999 899999986332 124788999999999999999999999999999999999987
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHH
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSV 304 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 304 (411)
++ .++|+|||++...... .....++..|+|||++.+..++.++|||||
T Consensus 160 ~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 212 (283)
T cd05090 160 QL---------------------------HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF 212 (283)
T ss_pred CC---------------------------cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence 66 5677777766543221 122345678999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 305 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||++|||++ |..||.+.+..+....+.... .. ......+..+.+++.+|++.+ |++||++.+++++.
T Consensus 213 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~cl~~~----p~~Rp~~~~i~~~l 280 (283)
T cd05090 213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ-LL--PCSEDCPPRMYSLMTECWQEG----PSRRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC--CCCCCCCHHHHHHHHHHcccC----cccCcCHHHHHHHh
Confidence 999999998 999998876655555444322 11 122345678889999998888 99999999998765
No 269
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1e-40 Score=315.63 Aligned_cols=248 Identities=21% Similarity=0.262 Sum_probs=196.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc--EEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~ 166 (411)
++|++.+.||+|+||.||+|.++.++. .+|+|.++.. ......+.+|+.++.++ .|+++ +++++++..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~i-----v~~~~~~~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEEECCCC
Confidence 479999999999999999999887775 4577776542 23445678899999999 67776 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
.+++||||+ +++|.+++.+.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 999999999 899999997543 12578999999999999999999999999999999999998766
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCc--ccccCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS--YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
.++|+|||++........ ...++..|+|||++.+..++.++|||||||++|
T Consensus 162 ---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 214 (303)
T cd05088 162 ---------------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 214 (303)
T ss_pred ---------------------------cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence 567777776653221111 123356799999998888999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||+| |..||.+.+..+....+... .........+..+.+++.+|++.+ |.+||++.+++++.
T Consensus 215 ellt~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~l 277 (303)
T cd05088 215 EIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREK----PYERPSFAQILVSL 277 (303)
T ss_pred HHHhcCCCCcccCChHHHHHHHhcC---CcCCCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHH
Confidence 9998 99999877666555444322 111112235677899999999998 88888888888764
No 270
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.5e-40 Score=307.30 Aligned_cols=246 Identities=24% Similarity=0.347 Sum_probs=199.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.++|++.++||+|+||.||+|.+..++ .||+|.+.......+.+.+|+.+++++.|+++ +++++++. .+..++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~~~~~~ 77 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL-----VPLYAVVS-EEPIYI 77 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCe-----eeEEEEEc-CCCcEE
Confidence 367999999999999999999886654 59999987655556778899999999988877 88888875 456899
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||++++++
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~------------------ 139 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL------------------ 139 (260)
T ss_pred EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC------------------
Confidence 99999 88999999876545689999999999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....
T Consensus 140 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 140 ---------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred ---------eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 56777777665432221 12245678999999988889999999999999999999 99999887776
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+....+.... .. ......+..+.+++.+|++.+ |.+||+++++++.
T Consensus 211 ~~~~~~~~~~-~~--~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 256 (260)
T cd05069 211 EVLEQVERGY-RM--PCPQGCPESLHELMKLCWKKD----PDERPTFEYIQSF 256 (260)
T ss_pred HHHHHHHcCC-CC--CCCcccCHHHHHHHHHHccCC----cccCcCHHHHHHH
Confidence 6655554321 11 122346778999999999888 8899999988764
No 271
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.2e-40 Score=302.34 Aligned_cols=248 Identities=26% Similarity=0.438 Sum_probs=209.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh-hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
.|++.+.||+|++|.||++.+..+++.|++|++..... ....+.+|+.+++.+.|+++ +++++++...+..+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNI-----VKYYGSYLKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCE-----eEEEEEEecCCeEEEE
Confidence 48899999999999999999999999999999976543 56778899999999987776 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+||+ +++|.+++.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++.++
T Consensus 76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~------------------- 135 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG------------------- 135 (253)
T ss_pred EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC-------------------
Confidence 9999 799999988763 3689999999999999999999999999999999999997765
Q ss_pred cccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||.+....... ....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...+..+...
T Consensus 136 --------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 207 (253)
T cd05122 136 --------EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF 207 (253)
T ss_pred --------eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH
Confidence 67888888776654443 45578899999999998889999999999999999999999998775555544
Q ss_pred HHHHHhCCCChh-HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 329 MMERVLGPLPHH-MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 329 ~i~~~~~~~p~~-~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
.+... ..+.. ....++..+.++|.+|+..+ |++||++.++++|+|
T Consensus 208 ~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~----p~~R~t~~~~l~~~~ 253 (253)
T cd05122 208 KIATN--GPPGLRNPEKWSDEFKDFLKKCLQKN----PEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHhc--CCCCcCcccccCHHHHHHHHHHccCC----hhhCCCHHHHhcCCC
Confidence 44331 11111 11223677899999999888 999999999999998
No 272
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=9e-41 Score=308.16 Aligned_cols=245 Identities=20% Similarity=0.279 Sum_probs=200.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
.+|++.+.||+|+||.||+|.++ ++..+|+|++.........+.+|+.+++++.|+++ +++++++...+..|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv 77 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNL-----VQLYGVCTKQRPIFIV 77 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-----EEEEEEEcCCCceEEE
Confidence 35889999999999999999876 45679999987655555678889999999988776 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||++++++
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~------------------- 137 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN------------------- 137 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC-------------------
Confidence 9999 999999998654 2689999999999999999999999999999999999998776
Q ss_pred cccCCCCCCeeEeecCCcccccCCCc----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..+
T Consensus 138 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~ 209 (256)
T cd05059 138 --------VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE 209 (256)
T ss_pred --------cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH
Confidence 466777776654322211 1123457999999998899999999999999999999 899998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
....+..... .......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 210 ~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~~~l~~ 254 (256)
T cd05059 210 VVESVSAGYR---LYRPKLAPTEVYTIMYSCWHEK----PEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHcCCc---CCCCCCCCHHHHHHHHHHhcCC----hhhCcCHHHHHHH
Confidence 6655543321 1122346778999999999888 9999999999875
No 273
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.6e-40 Score=311.54 Aligned_cols=260 Identities=25% Similarity=0.368 Sum_probs=214.8
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
...+.|++.+.||+|++|.||+|.+..++..||+|++.......+.+.+|+++++.++|+|+ +++++.+...+..
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~ 90 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-----VDYYDSYLVGDEL 90 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCe-----eEEEEEEEECCEE
Confidence 45567999999999999999999999889999999998655456678889999999988877 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++|+||+ +++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~---------------- 153 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG---------------- 153 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC----------------
Confidence 9999999 799999998764 3699999999999999999999999999999999999998776
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||.+...... .....++..|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 154 -----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~ 222 (286)
T cd06614 154 -----------SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL 222 (286)
T ss_pred -----------CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH
Confidence 4566666655433221 12345788999999999888999999999999999999999999877665
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
.....+... ...+......++..+.++|.+|++.+ |..||++.++++|+||......
T Consensus 223 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~il~~~~~~~~~~~ 279 (286)
T cd06614 223 RALFLITTK-GIPPLKNPEKWSPEFKDFLNKCLVKD----PEKRPSAEELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHhc-CCCCCcchhhCCHHHHHHHHHHhccC----hhhCcCHHHHhhChHhhccCch
Confidence 544443322 11111222336778999999999998 9999999999999999985443
No 274
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-40 Score=309.79 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=198.7
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~ 162 (411)
..++|++.+.||+|+||.||+|.++. ++..||+|++.... .....+.+|+.+++.+.|+|+ +++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~~ 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLGVV 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEE
Confidence 45789999999999999999998652 35679999986432 234567789999999888776 9999999
Q ss_pred ecCCeEEEEEccC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 015222 163 DYRNHICIVFEKL-GPSLYDFLRKNSY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~ 233 (411)
..++..++||||+ +++|.+++.+... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~-- 156 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF-- 156 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCC--
Confidence 9999999999999 8999999975321 2357788999999999999999999999999999999998766
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHH
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 308 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++
T Consensus 157 -------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 211 (277)
T cd05062 157 -------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 211 (277)
T ss_pred -------------------------CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence 56667777665332211 112456789999999988999999999999999
Q ss_pred HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|||++ |..||.+.+..+....+....... .....+..+.+++.+|++.+ |.+||++.+++++
T Consensus 212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~----p~~Rps~~e~l~~ 274 (277)
T cd05062 212 WEIATLAEQPYQGMSNEQVLRFVMEGGLLD---KPDNCPDMLFELMRMCWQYN----PKMRPSFLEIISS 274 (277)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 99999 799998877666555544322111 12345677899999999988 9999999999875
No 275
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.9e-41 Score=312.04 Aligned_cols=246 Identities=24% Similarity=0.337 Sum_probs=203.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh-hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.+|++.++||.|+||.||+|.+.. ++.||+|++..... ....+..|+.+++.++|+++ +++++++.+.+..++
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l 79 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHL-----ISLFAVCSVGEPVYI 79 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcch-----hheeeeEecCCCeEE
Confidence 469999999999999999999888 88899999976543 45678889999999988877 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~------------------ 141 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL------------------ 141 (261)
T ss_pred EEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc------------------
Confidence 99999 88999999876556789999999999999999999999999999999999998777
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.+..+
T Consensus 142 ---------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~ 212 (261)
T cd05148 142 ---------VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE 212 (261)
T ss_pred ---------eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 45666666554432211 12235678999999998899999999999999999998 899998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+..+..... . ......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 213 ~~~~~~~~~~-~--~~~~~~~~~~~~~i~~~l~~~----p~~Rpt~~~l~~~ 257 (261)
T cd05148 213 VYDQITAGYR-M--PCPAKCPQEIYKIMLECWAAE----PEDRPSFKALREE 257 (261)
T ss_pred HHHHHHhCCc-C--CCCCCCCHHHHHHHHHHcCCC----chhCcCHHHHHHH
Confidence 6666553211 1 112355677889999999888 8899999988764
No 276
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-40 Score=305.18 Aligned_cols=246 Identities=21% Similarity=0.297 Sum_probs=204.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.+.||.|+||.||+|... ++.||+|.++......+.+.+|+.+++.+.|+++ +++++++.+.+..++|
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v 78 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNL-----VQLLGVVLQGNPLYIV 78 (256)
T ss_pred hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcce-----eeeEEEEcCCCCeEEE
Confidence 57999999999999999999764 7889999998665556778899999999988877 9999999988999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~------------------- 139 (256)
T cd05039 79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL------------------- 139 (256)
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC-------------------
Confidence 9999 88999999876545699999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~ 329 (411)
.++|+|||.+...........++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+....
T Consensus 140 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~ 211 (256)
T cd05039 140 --------VAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPH 211 (256)
T ss_pred --------CEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 5677777777655433333344667999999988889999999999999999997 9999987766655544
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+.... ........+..+.+++.+|+..+ |++||++.++++..
T Consensus 212 ~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~l 253 (256)
T cd05039 212 VEKGY---RMEAPEGCPPEVYKVMKDCWELD----PAKRPTFKQLREQL 253 (256)
T ss_pred HhcCC---CCCCccCCCHHHHHHHHHHhccC----hhhCcCHHHHHHHH
Confidence 44321 11222345778999999999998 99999999988653
No 277
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6e-41 Score=314.66 Aligned_cols=254 Identities=22% Similarity=0.343 Sum_probs=201.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|+..+.||+|+||.||++.+..+++.||+|.+.... .....+.+|+.++.++. |+++ +++++++...+..+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----v~~~~~~~~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYI-----VKFYGALFREGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCE-----eeeeeEEecCCcEE
Confidence 5677889999999999999999999999999987432 34556788999999886 6666 99999998889999
Q ss_pred EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 170 IVFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 170 lv~e~~~~~L~~~l~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
++|||++++|.++.. ......+++..+..++.|++.||+|||+. ||+||||||+||+++.++
T Consensus 80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~-------------- 145 (288)
T cd06616 80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG-------------- 145 (288)
T ss_pred EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--------------
Confidence 999999777766543 22234699999999999999999999975 999999999999997765
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC---CCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
.++|+|||++...... .....|+..|+|||++.+. .++.++|||||||++|+|++|+.||..
T Consensus 146 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 212 (288)
T cd06616 146 -------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPK 212 (288)
T ss_pred -------------cEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchh
Confidence 5778888877543222 2234688999999999876 689999999999999999999999976
Q ss_pred CChHHHHHHHHHHhC----CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 321 HENLEHLAMMERVLG----PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~----~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
... ....+.+... ..+.......+..+.+++.+|+..+ |++||+++++++|+||....
T Consensus 213 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~i~~~~~~~~~~ 274 (288)
T cd06616 213 WNS--VFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKD----ESKRPKYKELLEHPFIKDYE 274 (288)
T ss_pred cch--HHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCC----hhhCcCHHHHhcChhhhchh
Confidence 542 2222332221 1222222346778999999999988 99999999999999998744
No 278
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3e-40 Score=306.29 Aligned_cols=247 Identities=22% Similarity=0.300 Sum_probs=200.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC---CcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
++|++.+.||+|+||.||+|.++.+ ...||||+++.. ......+.+|+.++++++|+++ +++++++...+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-----IRLEGVVTKSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-----ceEeEEEecCC
Confidence 5799999999999999999998654 457999998643 2344567889999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++||+|+||||+|||++.++
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~-------------- 143 (266)
T cd05033 79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL-------------- 143 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--------------
Confidence 999999999 899999998754 3689999999999999999999999999999999999998776
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ 319 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~ 319 (411)
.++|+|||++....... ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.
T Consensus 144 -------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 144 -------------VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred -------------CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence 45666666555442111 11234578999999998899999999999999999998 999998
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.....+....+...... + .....+..+.+++.+|++.+ |++||++.+++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~~----p~~Rp~~~ei~~~l 262 (266)
T cd05033 211 DMSNQDVIKAVEDGYRL-P--PPMDCPSALYQLMLDCWQKD----RNERPTFSQIVSTL 262 (266)
T ss_pred CCCHHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHH
Confidence 77766665555443211 1 12345778899999998888 99999999998763
No 279
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-41 Score=319.75 Aligned_cols=252 Identities=25% Similarity=0.374 Sum_probs=199.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEec---cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~---~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
..|+++++||+||.+.||++.... .+.||+|.+. .+......+.+|+..|.+|+.+ .+||++++|-..++++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~----~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH----DKIIQLYDYEVTDGYL 435 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC----ceEEEEeeeeccCceE
Confidence 469999999999999999997544 3456766654 3445667789999999999743 5669999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
|+|||+-..+|..+|++... .++.-.++.+..|++.|+.+.|..||||.||||.|+|+..
T Consensus 436 YmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk------------------- 495 (677)
T KOG0596|consen 436 YMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK------------------- 495 (677)
T ss_pred EEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-------------------
Confidence 99999999999999998762 3444589999999999999999999999999999999854
Q ss_pred CccccCCCCCCeeEeecCCcccccCCCcc-----cccCCCccccceecCCC-----------CCccchhHHHHHHHHHHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLG-----------WNYPCDLWSVGCILVELC 312 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~-----------~~~~~DiwSlGvil~ell 312 (411)
+.+||+|||+|.....+.+. -+||+.|||||.+.... .++++||||||||||+|+
T Consensus 496 ---------G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMv 566 (677)
T KOG0596|consen 496 ---------GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMV 566 (677)
T ss_pred ---------eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHH
Confidence 26899999999876655433 58999999999996432 568999999999999999
Q ss_pred hCCCCCCCCChHHHHHHHHHHhCCCC-hhHHHhhh-hhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcc
Q 015222 313 SGEALFQTHENLEHLAMMERVLGPLP-HHMVIRAD-RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVI 383 (411)
Q Consensus 313 tg~~pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~-~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~ 383 (411)
.|+.||.... ..+.++..+..+-. -++....+ .++.++++.||..| |.+|+++.++|+|||+.-+
T Consensus 567 YgktPf~~~~--n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rd----PkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 567 YGKTPFGQII--NQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARD----PKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred hcCCchHHHH--HHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcC----cccCCCcHHHhcCcccccc
Confidence 9999997532 23333333322211 01111111 23889999999999 9999999999999999863
No 280
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.5e-40 Score=316.43 Aligned_cols=246 Identities=21% Similarity=0.289 Sum_probs=195.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc----EEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|++.+.||+|+||.||+|++..+++ .||+|+++.. ....+.+.+|+.+++.+.|+|+ +++++++...
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~g~~~~~ 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLTS 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEcCC
Confidence 579999999999999999999876665 3899998643 2445678889999999988887 9999988764
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
..++|+||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~------------- 146 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ------------- 146 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC-------------
Confidence 577999999 999999998754 3588999999999999999999999999999999999997766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCCc-----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.+||+|||++........ ...++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 147 --------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~ 212 (316)
T cd05108 147 --------------HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 212 (316)
T ss_pred --------------cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 567777777665432211 1234667999999999899999999999999999998 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.+....+....+... ...+. ....+..+.+++.+|+..+ |..||++.+++.+.
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~cl~~~----p~~Rps~~~l~~~l 265 (316)
T cd05108 213 DGIPASEISSILEKG-ERLPQ--PPICTIDVYMIMVKCWMID----ADSRPKFRELIIEF 265 (316)
T ss_pred CCCCHHHHHHHHhCC-CCCCC--CCCCCHHHHHHHHHHccCC----hhhCcCHHHHHHHH
Confidence 876665544333322 22221 1234567888899888877 88888998888763
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.5e-40 Score=310.31 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=207.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
-|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++++.|+++ +++++.+..++..++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l 79 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKDTKLWI 79 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCE-----eEEEEEEEeCCeEEE
Confidence 4788999999999999999999999999999986432 334567889999999988776 999999999999999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++... .+++..+..++.|++.||.|||+.|++|+||||+||+++.++
T Consensus 80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~------------------ 138 (277)
T cd06641 80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG------------------ 138 (277)
T ss_pred EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC------------------
Confidence 99999 88999998754 589999999999999999999999999999999999997766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||++...... .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||........
T Consensus 139 ---------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~ 209 (277)
T cd06641 139 ---------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV 209 (277)
T ss_pred ---------CEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH
Confidence 5677777766543322 1234678899999999888899999999999999999999999987665554
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
...+... .+.......+..+.+++.+|+..+ |.+||++.++++|+||.+..
T Consensus 210 ~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 210 LFLIPKN---NPPTLEGNYSKPLKEFVEACLNKE----PSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHhcC---CCCCCCcccCHHHHHHHHHHccCC----hhhCcCHHHHHhCHHHhhhh
Confidence 4443322 122233345677899999998888 99999999999999999854
No 282
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.8e-40 Score=312.51 Aligned_cols=272 Identities=21% Similarity=0.273 Sum_probs=214.9
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
...|...+.||+|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+.|+++ +++++++..++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~ 98 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNS-----IEYKGCYLREH 98 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEeeCC
Confidence 345889999999999999999999999999999986432 233467789999999988876 99999999999
Q ss_pred eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..++||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+||||+|+||+++.++
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--------------- 162 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--------------- 162 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC---------------
Confidence 999999999778888876543 3689999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++..... .....|+..|+|||++. +..++.++|||||||++|||++|..||...+.
T Consensus 163 ------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 229 (317)
T cd06635 163 ------------QVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 229 (317)
T ss_pred ------------CEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 567777777654332 23346888999999974 34688999999999999999999999987766
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCCCCCchhhHHHHHHH
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSASPNCLCKFYAITHC 402 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (411)
......+..... +.......+..+++++.+|++.+ |.+||++.++++|+|+..........+...+.-.....
T Consensus 230 ~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (317)
T cd06635 230 MSALYHIAQNES--PTLQSNEWSDYFRNFVDSCLQKI----PQDRPTSEELLKHMFVLRERPETVLIDLIQRTKDAVRE 302 (317)
T ss_pred HHHHHHHHhccC--CCCCCccccHHHHHHHHHHccCC----cccCcCHHHHHhChhhhccCcccchhhHHHHHHHHHHH
Confidence 555555444322 11122345677899999998888 99999999999999997765544333333343333333
No 283
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.7e-40 Score=324.70 Aligned_cols=249 Identities=20% Similarity=0.245 Sum_probs=195.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF 162 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~ 162 (411)
.++|++.++||+|+||.||+|.+... +..||||+++... ...+.+.+|+.+++++. |+|| +++++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnI-----v~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI-----VNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCe-----eeEEEEE
Confidence 35789999999999999999987433 3479999997432 33467889999999996 7766 9999999
Q ss_pred ecCCeEEEEEccC-CCCHHHHHHhcC------------------------------------------------------
Q 015222 163 DYRNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------ 187 (411)
Q Consensus 163 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------ 187 (411)
...+..|+||||| +|+|.+++.++.
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 9999999999999 999999986531
Q ss_pred ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEE
Q 015222 188 ----------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227 (411)
Q Consensus 188 ----------------------------------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli 227 (411)
...+++..+..++.||+.||+|||+.||+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 1247788899999999999999999999999999999999
Q ss_pred ecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhH
Q 015222 228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLW 302 (411)
Q Consensus 228 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diw 302 (411)
+.++ .+||+|||++....... ....++..|+|||++.+..++.++|||
T Consensus 271 ~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 271 AQGK---------------------------IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred eCCC---------------------------EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 8765 56777777765432211 223567889999999988999999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 303 SVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 303 SlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||||++|||++ |..||................... ......+..+.+++.+|+..+ |++||++.++.+.
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~d----P~~RPt~~~l~~~ 393 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM--AKPDHATQEVYDIMVKCWNSE----PEKRPSFLHLSDI 393 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHCccC----HhHCcCHHHHHHH
Confidence 99999999997 999998754433332222211111 122346678899999998888 8899998888764
No 284
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.6e-40 Score=310.53 Aligned_cols=247 Identities=19% Similarity=0.277 Sum_probs=199.7
Q ss_pred CCeEEEeeeccccceEEEEEEeC-----CCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|.+.+.||+|+||.||++.+. .++..+|+|.+.... ...+.+.+|+.+++++.|+++ +++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-----VKFYGVCVEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecC
Confidence 47999999999999999999853 345679999987533 345678899999999988887 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~ 233 (411)
+..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++|++||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~-- 157 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL-- 157 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC--
Confidence 9999999999 899999997543 12489999999999999999999999999999999999998776
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHH
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCIL 308 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 308 (411)
.++|+|||.+....... ....++..|+|||++.+..++.++|||||||++
T Consensus 158 -------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 212 (288)
T cd05093 158 -------------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 212 (288)
T ss_pred -------------------------cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 45666666655332211 123457789999999988999999999999999
Q ss_pred HHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 309 VELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 309 ~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|+|++ |..||.+.+..+....+....... .....+..+.+++.+|++.+ |.+||++.++++.
T Consensus 213 ~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~~----p~~Rpt~~~v~~~ 275 (288)
T cd05093 213 WEIFTYGKQPWYQLSNNEVIECITQGRVLQ---RPRTCPKEVYDLMLGCWQRE----PHMRLNIKEIHSL 275 (288)
T ss_pred HHHHhCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHccCC----hhhCCCHHHHHHH
Confidence 99998 999998877766666555432211 12245677899999999988 8899999988654
No 285
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.2e-40 Score=303.95 Aligned_cols=248 Identities=25% Similarity=0.395 Sum_probs=199.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||+|.++.. ....+.+.+|+++++++.|+++ +++++.+...+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i-----~~~~~~~~~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV-----IKYLASFIENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe-----eeeeeeeecCCe
Confidence 5799999999999999999999999999999988632 2335678899999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.++||||+ +++|.+++... ....+++..+..++.||+.||.|||+.||+|+||||+||+++.++
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~------------- 143 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG------------- 143 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC-------------
Confidence 99999999 89999998753 234589999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 144 --------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred --------------cEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 5667777766543222 12346788999999999888999999999999999999999999654
Q ss_pred Ch--HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 322 EN--LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 322 ~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.. .+....+.. +..+.......+..+.++|.+|+..+ |+.||++.++++.
T Consensus 210 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~cl~~~----p~~Rp~~~~il~~ 261 (267)
T cd08224 210 KMNLYSLCKKIEK--CDYPPLPADHYSEELRDLVSRCINPD----PEKRPDISYVLQV 261 (267)
T ss_pred CccHHHHHhhhhc--CCCCCCChhhcCHHHHHHHHHHcCCC----cccCCCHHHHHHH
Confidence 32 122222222 12222222356678899999998888 9999999988764
No 286
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1e-40 Score=320.18 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=193.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~ 163 (411)
++|++.+.||+|+||.||+|.+.. +++.||+|+++... ...+.+..|+.+++++ .|+|+ +++++++.
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~ni-----v~~~~~~~ 81 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNV-----VNLLGACT 81 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcch-----hheeeeEe
Confidence 589999999999999999997543 45789999987432 2345677899999999 66766 99998775
Q ss_pred c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 015222 164 Y-RNHICIVFEKL-GPSLYDFLRKNSY----------------------------------------------------- 188 (411)
Q Consensus 164 ~-~~~~~lv~e~~-~~~L~~~l~~~~~----------------------------------------------------- 188 (411)
. +..++++|||+ +++|.+++.....
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 4 46789999999 9999999864321
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeE
Q 015222 189 ------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKL 262 (411)
Q Consensus 189 ------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl 262 (411)
..+++..+..++.||+.||+|||++||+||||||+|||++.++ .++|
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~---------------------------~vkL 214 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN---------------------------VVKI 214 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC---------------------------cEEE
Confidence 2578999999999999999999999999999999999998766 5677
Q ss_pred eecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCC
Q 015222 263 IDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGP 336 (411)
Q Consensus 263 ~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~ 336 (411)
+|||++...... .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+.........
T Consensus 215 ~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~ 294 (337)
T cd05054 215 CDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR 294 (337)
T ss_pred eccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC
Confidence 777776653221 122345678999999999999999999999999999998 99999875544433322221111
Q ss_pred CChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 337 LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 337 ~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.......+..+.+++.+|++.+ |++||++.++++|.
T Consensus 295 --~~~~~~~~~~~~~l~~~cl~~~----p~~RPs~~ell~~l 330 (337)
T cd05054 295 --MRAPEYATPEIYSIMLDCWHNN----PEDRPTFSELVEIL 330 (337)
T ss_pred --CCCCccCCHHHHHHHHHHccCC----hhhCcCHHHHHHHH
Confidence 1112245667889999998888 99999999999864
No 287
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.5e-40 Score=312.04 Aligned_cols=247 Identities=21% Similarity=0.267 Sum_probs=196.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc--EEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~ 166 (411)
++|++.+.||+|+||.||+|.++.++. .+++|.++.. ....+.+.+|+.++.++ .|+++ +++++++...+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI-----INLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCch-----hheEEEEccCC
Confidence 479999999999999999999877764 4788888642 23445678899999999 56666 99999999889
Q ss_pred eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
..++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL 156 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence 999999999 899999997542 12488999999999999999999999999999999999997766
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcc--cccCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|
T Consensus 157 ---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ 209 (297)
T cd05089 157 ---------------------------ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLW 209 (297)
T ss_pred ---------------------------eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHH
Confidence 5667777766532211111 12345799999999889999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 310 ELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 310 ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||++ |..||.+.+..+....+..... ......++..+.+++.+|++.+ |.+||++.++++.
T Consensus 210 el~t~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 271 (297)
T cd05089 210 EIVSLGGTPYCGMTCAELYEKLPQGYR---MEKPRNCDDEVYELMRQCWRDR----PYERPPFAQISVQ 271 (297)
T ss_pred HHHcCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 9997 9999988777666555443221 1122346678899999998888 8889999998765
No 288
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-40 Score=308.53 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=199.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
++|++.+.||+|+||.||+|.+..+++.||||.+... ......+.+|+.+++.+.|+|+ +++++++..++.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV-----IKYYASFIEDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCch-----hhhhheeEeCCe
Confidence 4689999999999999999999999999999988642 2334567889999999988877 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.+++|||+ +++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~------------- 143 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG------------- 143 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC-------------
Confidence 99999999 88999988742 224689999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||++....... ....|+..|+|||.+.+..++.++||||||+++|+|++|..||.+.
T Consensus 144 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 144 --------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred --------------CEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 56677777655433221 2346888999999999888999999999999999999999999754
Q ss_pred ChH--HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 322 ENL--EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 322 ~~~--~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
... +....+... ..+.......+..+.+++.+|+..+ |.+|||+.++++.
T Consensus 210 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~i~~~ 261 (267)
T cd08229 210 KMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINPD----PEKRPDITYVYDV 261 (267)
T ss_pred cchHHHHhhhhhcC--CCCCCCcccccHHHHHHHHHhcCCC----cccCCCHHHHHHH
Confidence 332 222222221 2222222346678999999998888 9999999987753
No 289
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=5.4e-40 Score=304.34 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=200.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc------hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|++.+.||+|+||.||+|++..+++.||+|++... ......+.+|+.++++++|+++ +++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~ 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI-----VQYYGCLRDP 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCc-----ceEEEEEEcC
Confidence 4699999999999999999999999999999987532 2234567889999999998887 9999988653
Q ss_pred --CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 166 --NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 166 --~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
+.++++|||+ +++|.+++.... .+++..+..++.||+.||.|||++|++|+||||+||+++.++.
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~---------- 144 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGN---------- 144 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCC----------
Confidence 5789999999 899999998765 5899999999999999999999999999999999999987764
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccC------CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ------DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
++|+|||++..... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.
T Consensus 145 -----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 207 (264)
T cd06653 145 -----------------VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP 207 (264)
T ss_pred -----------------EEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 55555555543211 1123468889999999998889999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
||...........+. ..+.+..+....++.+.+++.+|+. + +..||++.+++.|||.
T Consensus 208 p~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~i~~~l~-~----~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 208 PWAEYEAMAAIFKIA--TQPTKPMLPDGVSDACRDFLKQIFV-E----EKRRPTAEFLLRHPFV 264 (264)
T ss_pred CCCccCHHHHHHHHH--cCCCCCCCCcccCHHHHHHHHHHhc-C----cccCccHHHHhcCCCC
Confidence 998765544433322 2222333445567889999999977 3 7899999999999985
No 290
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.3e-40 Score=312.19 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=208.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+.|...++||+|+||+||+|.+..+++.||+|++.... .....+.+|+.+++.++|+++ +++++++.+.+.
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~ 95 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-----IEYKGCYLKEHT 95 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEeCCE
Confidence 45788889999999999999999999999999986422 233457789999999988877 999999999999
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
.|+||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++
T Consensus 96 ~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~---------------- 158 (313)
T cd06633 96 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG---------------- 158 (313)
T ss_pred EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC----------------
Confidence 99999999888988887644 3689999999999999999999999999999999999997766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCChH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHENL 324 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~ 324 (411)
.++|+|||++..... .....|+..|+|||++. +..++.++|||||||++|+|++|..||...+..
T Consensus 159 -----------~~kL~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~ 226 (313)
T cd06633 159 -----------QVKLADFGSASKSSP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 226 (313)
T ss_pred -----------CEEEeecCCCcccCC-CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 567777777654322 23457889999999985 346889999999999999999999999877665
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
.....+... ..+......++..+++++.+|++.+ |.+||++.+++.|+||....
T Consensus 227 ~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~----P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 227 SALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKI----PQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCC----hhhCcCHHHHhcCcccCCCc
Confidence 555544332 2232233345667899999999999 99999999999999999744
No 291
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.2e-40 Score=308.93 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=200.1
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
.++|++.+.||+|+||.||+|.++.. +..||+|.+.... .....+.+|+.+++.+.|+++ +++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~ 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV-----VRLLGVVS 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEEc
Confidence 46899999999999999999988654 3789999986443 334567789999999988877 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
.....++||||+ +++|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+|||++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~--- 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDL--- 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCC---
Confidence 999999999999 899999997532 12468889999999999999999999999999999999998776
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
.++|+|||++...... .....++..|+|||.+.+..++.++|||||||++|
T Consensus 157 ------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 212 (277)
T cd05032 157 ------------------------TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW 212 (277)
T ss_pred ------------------------CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence 4566666665533221 12235678899999998888999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHHh-CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 310 ELCS-GEALFQTHENLEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 310 ellt-g~~pf~~~~~~~~~~~i~~~~-~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||++ |..||.+.+..+....+.... ...| ...+..+.+++.+|+..+ |++|||+.++++.
T Consensus 213 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~----p~~Rpt~~~l~~~ 274 (277)
T cd05032 213 EMATLAEQPYQGLSNEEVLKFVIDGGHLDLP----ENCPDKLLELMRMCWQYN----PKMRPTFLEIVSS 274 (277)
T ss_pred HhhccCCCCCccCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCC----hhhCCCHHHHHHH
Confidence 9998 999998877766665555221 1222 234678899999998888 9999999999864
No 292
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.5e-40 Score=304.80 Aligned_cols=245 Identities=24% Similarity=0.334 Sum_probs=203.1
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.++|++.++||+|+||.||+|.+. +++.||||.+.......+.+.+|+.+++++.|+++ +++++++......++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~~ 78 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKL-----VQLYAVCSEEEPIYI 78 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCE-----eeeeeeeecCCceEE
Confidence 468999999999999999999976 45779999998766666778999999999988776 999999998899999
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
||||+ +++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||++++++
T Consensus 79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~------------------ 140 (261)
T cd05034 79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL------------------ 140 (261)
T ss_pred EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC------------------
Confidence 99999 89999999876555799999999999999999999999999999999999998776
Q ss_pred ccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.+..
T Consensus 141 ---------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 211 (261)
T cd05034 141 ---------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR 211 (261)
T ss_pred ---------CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 56667777665433211 11234568999999998889999999999999999998 99999887776
Q ss_pred HHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 325 EHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 325 ~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
..+..+..... ..+ ...+..+.+++.+|+..+ |.+||+++++.+
T Consensus 212 ~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~----p~~Rp~~~~l~~ 256 (261)
T cd05034 212 EVLEQVERGYRMPRP----PNCPEELYDLMLQCWDKD----PEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcccC----cccCCCHHHHHH
Confidence 66666554321 122 234677899999999988 888889988875
No 293
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.4e-40 Score=309.93 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=201.7
Q ss_pred CeEEEeeeccccceEEEEEEeC---CCCcEEEEEEeccch-----hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~ 163 (411)
.|++.+.||.|+||.||+|.+. .+|+.||+|+++... ...+.+.+|+.+++++. |+++ +.+++.+.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCCh-----hceeeEee
Confidence 4899999999999999999875 478999999987432 23456778999999995 5555 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
.++..|+||||+ +++|.+++.... .+++..+..++.||+.||.|||+.|++||||||+|||++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~----------- 142 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG----------- 142 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC-----------
Confidence 999999999999 899999998765 689999999999999999999999999999999999997766
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~ 316 (411)
.++|+|||++...... .....|+..|+|||.+.+. .++.++||||||+++|+|++|..
T Consensus 143 ----------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~ 206 (290)
T cd05613 143 ----------------HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGAS 206 (290)
T ss_pred ----------------CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCC
Confidence 5677777766543221 1234688999999998763 47889999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccC
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~ 387 (411)
||...........+...............+..+.+++.+|+..+ |..|+ ++.++++|+||..+.+..
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~----p~~R~~~~~~~~~~l~~~~~~~~~~~~~ 278 (290)
T cd05613 207 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKD----PKKRLGCGPSDADEIKKHPFFQKINWDD 278 (290)
T ss_pred CCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCC----HHHhcCCCCCCHHHHHcCcccccCCHHH
Confidence 99754322222222211111111122345677889999999888 77775 899999999999987543
No 294
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.6e-40 Score=302.55 Aligned_cols=248 Identities=29% Similarity=0.438 Sum_probs=206.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--Ce
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NH 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~ 167 (411)
+|++.+.||+|++|.||+|.+..+++.|++|++.... ...+.+.+|+.+++++.|+++ +++++.+... +.
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI-----VRYYGSERDEEKNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCE-----eeEEEEEecCCCCe
Confidence 4889999999999999999999999999999997544 446778899999999988776 9999999888 89
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.++|||++ +++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--------------- 138 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--------------- 138 (260)
T ss_pred EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC---------------
Confidence 99999999 999999998765 799999999999999999999999999999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+...... .....++..|+|||.+.+...+.++||||||+++|+|++|..||...
T Consensus 139 ------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (260)
T cd06606 139 ------------VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL 206 (260)
T ss_pred ------------CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 5666677666554333 23356888999999999888999999999999999999999999876
Q ss_pred Ch-HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 322 EN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 322 ~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+. ......+.. ......+....+..+.+++.+|+..+ |.+||++.++++|+||
T Consensus 207 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~i~~~l~~~----p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 207 GNPMAALYKIGS--SGEPPEIPEHLSEEAKDFLRKCLRRD----PKKRPTADELLQHPFL 260 (260)
T ss_pred CchHHHHHhccc--cCCCcCCCcccCHHHHHHHHHhCcCC----hhhCCCHHHHhhCCCC
Confidence 52 222222221 11222233445788999999999888 9999999999999997
No 295
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2e-40 Score=314.37 Aligned_cols=273 Identities=22% Similarity=0.267 Sum_probs=219.0
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
...|++.+.||+|+||.||+|+++.+++.||+|.+... ......+.+|+.+++.+.|+++ +++++++...+
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 88 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLREH 88 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcCC
Confidence 35688899999999999999999999999999998632 2233457789999999988877 99999999999
Q ss_pred eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 167 ~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..++||||+.++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--------------- 152 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--------------- 152 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC---------------
Confidence 999999999778888876543 3589999999999999999999999999999999999997766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||++..... .....|+..|+|||.+. ...++.++|||||||++|+|++|..||...+.
T Consensus 153 ------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 153 ------------LVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred ------------cEEECCcccceeecC-cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 567777776654332 22346888999999975 34678999999999999999999999977665
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCCCCCchhhHHHHHHHH
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSASPNCLCKFYAITHCL 403 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (411)
.+....+... ..+.......+..+.++|.+|+..+ |.+||++.++++|+|+.........+...+.++.....+
T Consensus 220 ~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~----P~~Rp~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (308)
T cd06634 220 MSALYHIAQN--ESPALQSGHWSEYFRNFVDSCLQKI----PQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVREL 293 (308)
T ss_pred HHHHHHHhhc--CCCCcCcccccHHHHHHHHHHhhCC----cccCCCHHHHhhCccccccCChhHHHHHHHHHHHHHHHH
Confidence 5544443332 2222223356677899999998888 999999999999999999877777777777666544443
No 296
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-41 Score=321.59 Aligned_cols=259 Identities=24% Similarity=0.315 Sum_probs=197.9
Q ss_pred EEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhh-hHHHHHHHHHHHHHhcCCCCCcceEEEeee
Q 015222 83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNW 161 (411)
Q Consensus 83 ~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~ 161 (411)
.+..-...++.|.-...||+|+||.||+|....+ ..||||.+...... ..+|.+|+.++.+++|+|+ |++++|
T Consensus 66 s~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl-----v~LlGy 139 (361)
T KOG1187|consen 66 SYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL-----VKLLGY 139 (361)
T ss_pred eHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc-----ccEEEE
Confidence 3333344567888889999999999999987654 88999988765544 5669999999999999888 999999
Q ss_pred eecCC-eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCCCCcEEEecCcccccC
Q 015222 162 FDYRN-HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR---LIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 162 ~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dikp~NIli~~~~~~~l~ 236 (411)
|.+.+ +.+||+||+ +|+|.++|.......++|....+|+.++++||+|||+.. |||||||++|||+|.+
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~------ 213 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDED------ 213 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCC------
Confidence 99888 599999999 999999998765337899999999999999999999853 9999999999998654
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCcccccC-CCcc--c-ccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-DHSY--V-VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
.++||+|||+|..... .... . .||..|+|||.+..+..+.++|||||||+|.||+
T Consensus 214 ---------------------~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllEli 272 (361)
T KOG1187|consen 214 ---------------------FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELI 272 (361)
T ss_pred ---------------------CCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHH
Confidence 4788888888876554 3222 2 7999999999999989999999999999999999
Q ss_pred hCCCCCCCCC---hHHHHHH----HHH--HhCCCChhHH-Hh-----hhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 313 SGEALFQTHE---NLEHLAM----MER--VLGPLPHHMV-IR-----ADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 313 tg~~pf~~~~---~~~~~~~----i~~--~~~~~p~~~~-~~-----~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||+.+..... ....... +.+ ...-+.+.+. .. .-..+..+-.+|++.+ |..||++.++.+.
T Consensus 273 tgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~----~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 273 TGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPD----PKERPTMSQVVKE 348 (361)
T ss_pred hCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcC----CCcCcCHHHHHHH
Confidence 9998887432 1111111 111 0001111111 11 1122445556777777 7888888887665
Q ss_pred C
Q 015222 378 L 378 (411)
Q Consensus 378 ~ 378 (411)
+
T Consensus 349 L 349 (361)
T KOG1187|consen 349 L 349 (361)
T ss_pred H
Confidence 5
No 297
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.6e-40 Score=311.51 Aligned_cols=251 Identities=21% Similarity=0.341 Sum_probs=200.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC----------------cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCc
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK----------------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~----------------~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~ 153 (411)
++|++.++||+|+||.||+|.+..++ ..||+|++.... ...+.+.+|+.+++++.|+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i--- 81 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI--- 81 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE---
Confidence 57999999999999999999876544 568999987532 345678889999999988877
Q ss_pred ceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 015222 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 223 (411)
Q Consensus 154 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~ 223 (411)
+++++++..++..+++||++ +++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+
T Consensus 82 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~ 159 (296)
T cd05051 82 --ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR 159 (296)
T ss_pred --eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 99999999999999999999 899999997643 125899999999999999999999999999999999
Q ss_pred cEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCcc
Q 015222 224 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYP 298 (411)
Q Consensus 224 NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~ 298 (411)
||+++.++ .++|+|||.+...... .....++..|+|||.+.+..++.+
T Consensus 160 Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (296)
T cd05051 160 NCLVGKNY---------------------------TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTK 212 (296)
T ss_pred ceeecCCC---------------------------ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCcc
Confidence 99998776 5566666665533211 122345778999999998889999
Q ss_pred chhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHh----CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 299 CDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVL----GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 299 ~DiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~----~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
+|||||||++|||++ |..||...+..+.+....... ...........+..+.+++.+|+..+ |.+||++.
T Consensus 213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~----p~~Rpt~~ 288 (296)
T cd05051 213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRD----EEDRPTFR 288 (296)
T ss_pred chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccC----hhcCCCHH
Confidence 999999999999998 788998777666655554431 11111112235578999999999888 99999999
Q ss_pred HHHhcC
Q 015222 373 AVWKLL 378 (411)
Q Consensus 373 ~il~~~ 378 (411)
++++.+
T Consensus 289 el~~~L 294 (296)
T cd05051 289 EIHLFL 294 (296)
T ss_pred HHHHHh
Confidence 997654
No 298
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-43 Score=300.53 Aligned_cols=259 Identities=24% Similarity=0.421 Sum_probs=215.6
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec---
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--- 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--- 164 (411)
.+.|+-..+||+|.||.||+|+.+++|+.||+|++-- .........+|+.+|..|+|+|+ +.+++.+..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv-----~nliEic~tk~T 90 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKAT 90 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhH-----HHHHHHHhhccC
Confidence 3578888999999999999999999999999987642 22345677899999999999988 555555432
Q ss_pred -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcc
Q 015222 165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
...+|+||++|..+|..++.... .+++..++++++.+++.||.|+|...|+|||+|++|+||+.+|
T Consensus 91 p~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg-------- 161 (376)
T KOG0669|consen 91 PTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG-------- 161 (376)
T ss_pred CcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc--------
Confidence 34699999999999999997654 4799999999999999999999999999999999999998888
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCC-CCCccchhHHHHHHHHHH
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVEL 311 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~el 311 (411)
.+||+|||+++..... .+..+-|.+|++||.+.|. .|+++.|||..|||+.||
T Consensus 162 -------------------ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeM 222 (376)
T KOG0669|consen 162 -------------------ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEM 222 (376)
T ss_pred -------------------eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHH
Confidence 5566666666433221 1234569999999999987 799999999999999999
Q ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhh-------------------------------hhhhhhhhccCCccC
Q 015222 312 CSGEALFQTHENLEHLAMMERVLGPLPHHMVIRA-------------------------------DRRAEKYFRRGARLD 360 (411)
Q Consensus 312 ltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~-------------------------------~~~~~~li~~~l~~~ 360 (411)
.+|.+.|.+.++...+..|....+.+..+.|++. ++.+.+++.++|..|
T Consensus 223 wtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~D 302 (376)
T KOG0669|consen 223 WTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLD 302 (376)
T ss_pred HccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccC
Confidence 9999999999999999999888887655544432 236778999999999
Q ss_pred CCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 361 WPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 361 ~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
|.+|+++.++++|.||+.-...
T Consensus 303 ----P~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 303 ----PTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred ----cccCcchHhhhchhhhhcCCcc
Confidence 9999999999999999865443
No 299
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.7e-40 Score=301.48 Aligned_cols=249 Identities=27% Similarity=0.459 Sum_probs=208.1
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||.|+||.||++.+..+++.||+|++.... .....+.+|+++++.++|+++ +++.+.+..++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-----~~~~~~~~~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI-----IKYYESFEEKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh-----hheEEEEecCCEEE
Confidence 5899999999999999999999999999999997532 455668889999999988877 99999998889999
Q ss_pred EEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|||++ +++|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--------------- 140 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--------------- 140 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC---------------
Confidence 999999 889999998652 34799999999999999999999999999999999999998766
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.++|+|||.+...... .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+.
T Consensus 141 ------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~ 208 (258)
T cd08215 141 ------------LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL 208 (258)
T ss_pred ------------cEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH
Confidence 5666666666543322 1234688899999999888899999999999999999999999987765
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.+......... ........+..+.+++.+||..+ |+.||++.++++|+||
T Consensus 209 ~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 209 LELALKILKGQ---YPPIPSQYSSELRNLVSSLLQKD----PEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHhcCCCC
Confidence 55554443321 11122256778899999999998 9999999999999997
No 300
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3.9e-40 Score=303.78 Aligned_cols=242 Identities=21% Similarity=0.318 Sum_probs=201.2
Q ss_pred eeeccccceEEEEEEeCCC---CcEEEEEEeccchhh--hHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|.+... +..||+|++...... .+.+.+|+.+++.+.|+++ +++++++.....+++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNV-----VRLLGVCTEEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCCh-----heeeeeecCCCceEEEE
Confidence 4789999999999999866 889999999754433 5778899999999988777 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 173 EKL-GPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~-------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
||+ +++|.+++.... ...+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~------------- 142 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL------------- 142 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC-------------
Confidence 999 999999998751 24799999999999999999999999999999999999998776
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus 143 --------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~ 208 (262)
T cd00192 143 --------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPY 208 (262)
T ss_pred --------------cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCC
Confidence 5666777666554332 223457889999999998889999999999999999999 69999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...+..+....+.... .......++..+.+++.+|+..+ |..||++.+++++.
T Consensus 209 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~l~~~l 261 (262)
T cd00192 209 PGLSNEEVLEYLRKGY---RLPKPEYCPDELYELMLSCWQLD----PEDRPTFSELVERL 261 (262)
T ss_pred CCCCHHHHHHHHHcCC---CCCCCccCChHHHHHHHHHccCC----cccCcCHHHHHHhh
Confidence 9887766666555421 11223345778999999998888 99999999999864
No 301
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.8e-40 Score=310.94 Aligned_cols=249 Identities=22% Similarity=0.323 Sum_probs=198.1
Q ss_pred CCCeEEEeeeccccceEEEEEEe-----CCCCcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~ 162 (411)
.++|++.+.||+|+||.||+|.+ ..++..||+|+++... ...+.+.+|+.+++++ .|+|+ +++++++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~ 108 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENI-----VNLLGAC 108 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCc-----ceEEEEE
Confidence 35799999999999999999975 3345689999987532 3345678899999999 68777 9999999
Q ss_pred ecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
...+..++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+|+||||+|||++.++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~---------- 178 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK---------- 178 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC----------
Confidence 9999999999999 89999999865534589999999999999999999999999999999999997766
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GE 315 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~ 315 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |.
T Consensus 179 -----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~ 241 (302)
T cd05055 179 -----------------IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGS 241 (302)
T ss_pred -----------------eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 45666666655332211 12245678999999998899999999999999999998 99
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.||.+....+......... .+.......+..+.+++.+|+..+ |++||++.++++.
T Consensus 242 ~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ell~~ 297 (302)
T cd05055 242 NPYPGMPVDSKFYKLIKEG--YRMAQPEHAPAEIYDIMKTCWDAD----PLKRPTFKQIVQL 297 (302)
T ss_pred CCcCCCCchHHHHHHHHcC--CcCCCCCCCCHHHHHHHHHHcCCC----chhCcCHHHHHHH
Confidence 9998766554443332211 111112235678999999999988 9999999998864
No 302
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=5.2e-40 Score=306.93 Aligned_cols=250 Identities=30% Similarity=0.505 Sum_probs=207.5
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
|++.+.||+|++|.||+|.+..+++.||+|++... ....+.+..|+.+++.+.|+++ +++++++.+.+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI-----VKLLDVIHTERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCH-----HHHHhhhhcCCceEE
Confidence 67788999999999999999999999999999754 3344667789999999988777 999999999999999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
||||++++|.+++.+.. ..+++..+..++.|++.||+|||++||+||||+|+||++++++
T Consensus 76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~------------------- 135 (282)
T cd07829 76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG------------------- 135 (282)
T ss_pred EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC-------------------
Confidence 99999779999998763 3699999999999999999999999999999999999998766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEH 326 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~ 326 (411)
.++|+|||.+....... ....++..|+|||.+.+. .++.++|||||||++|||++|..||.+.+..+.
T Consensus 136 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~ 207 (282)
T cd07829 136 --------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ 207 (282)
T ss_pred --------CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 56777777665443222 223457789999998877 789999999999999999999999998877766
Q ss_pred HHHHHHHhCCCChhH-------------------------HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 327 LAMMERVLGPLPHHM-------------------------VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~-------------------------~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
+..+....+...... .+..+..+.++|.+||..+ |++||++.+++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~----P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 208 LFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYN----PAKRISAKEALKHPYF 282 (282)
T ss_pred HHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccC----cccCCCHHHHhhCcCC
Confidence 666555433222211 1233567899999999998 9999999999999997
No 303
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7.5e-40 Score=300.83 Aligned_cols=247 Identities=27% Similarity=0.411 Sum_probs=208.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.+.||+|++|.||+|.+..+++.||+|.+.... ...+.+.+|+++++++.|+++ +++++++...+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI-----VKYIGSIETSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCc-----cEEEEEEEeCCEEE
Confidence 5899999999999999999999999999999997554 355678899999999988877 99999999899999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++||++ +++|.+++.... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~----------------- 136 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG----------------- 136 (254)
T ss_pred EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC-----------------
Confidence 999999 889999998764 799999999999999999999999999999999999997765
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC---cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||...+..++.++||||||+++|+|++|..||...+...
T Consensus 137 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~ 206 (254)
T cd06627 137 ----------VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMA 206 (254)
T ss_pred ----------CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 56777777766544332 23467889999999988888999999999999999999999998766544
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.. ... .......+..+.+++.+||..+ |++||++.+++.|+||
T Consensus 207 ~~~~~~~--~~~-~~~~~~~~~~~~~~i~~~l~~~----p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 207 ALFRIVQ--DDH-PPLPEGISPELKDFLMQCFQKD----PNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHhc--cCC-CCCCCCCCHHHHHHHHHHHhCC----hhhCcCHHHHhcCCCC
Confidence 4443332 111 1223456778899999999988 9999999999999997
No 304
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-40 Score=312.17 Aligned_cols=249 Identities=18% Similarity=0.278 Sum_probs=197.6
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC-------CCcEEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN 160 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~ 160 (411)
.++|.+.+.||+|+||.||+|.+.. +...||+|.++.. ......+..|+.+++.+ .|+++ +++++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~ 91 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INLLG 91 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCE-----eeEEE
Confidence 3689999999999999999998643 2356999999753 23345677899999998 57666 99999
Q ss_pred eeecCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 015222 161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI 225 (411)
Q Consensus 161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NI 225 (411)
++...+..|+||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|++||||||+||
T Consensus 92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 999999999999999 8999999986431 2488899999999999999999999999999999999
Q ss_pred EEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccch
Q 015222 226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCD 300 (411)
Q Consensus 226 li~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D 300 (411)
|++.++ .++|+|||.+....... ....++..|+|||++.+..++.++|
T Consensus 172 ll~~~~---------------------------~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 224 (307)
T cd05098 172 LVTEDN---------------------------VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 224 (307)
T ss_pred EEcCCC---------------------------cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence 998766 45666666665432211 1123456899999999888999999
Q ss_pred hHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 301 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||||||++|||++ |..||.+....+....+.... ........+..+.+++.+|+..+ |..||++.+++++.
T Consensus 225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~evl~~l 296 (307)
T cd05098 225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAV----PSQRPTFKQLVEDL 296 (307)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC---CCCCCCcCCHHHHHHHHHHcccC----hhhCcCHHHHHHHH
Confidence 9999999999998 999998766655555444322 11222345678889999999888 99999999998754
No 305
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=298.91 Aligned_cols=273 Identities=18% Similarity=0.310 Sum_probs=215.0
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc----hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.++|.++..||+|+|..|.+++.+.|.+.+|+|++++. .+..+..+.|-.+..+.. .+|.+|.++.+|..+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as----n~pflvglhscfqtes 324 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS----NNPFLVGLHSCFQTES 324 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc----CCCeEEehhhhhcccc
Confidence 36799999999999999999999999999999999853 234455566766666553 3366699999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+++|.||+ ||+|.-.++++. +++++.++.+...|+.||.|||++|||.||||.+|+|++.+|++|++|+|+.+..-
T Consensus 325 rlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred eEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999 999988888775 79999999999999999999999999999999999999999855555554433222
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCC-----
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT----- 320 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~----- 320 (411)
.+ ....++++|||.|+|||++.+..|++.+|+|+|||+++||+.|+.||.-
T Consensus 403 ~~------------------------gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n 458 (593)
T KOG0695|consen 403 GP------------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN 458 (593)
T ss_pred CC------------------------CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC
Confidence 21 2234668999999999999999999999999999999999999999962
Q ss_pred --CChH-HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH--HHHHHHhcCCCCcccccCCCCCchhh
Q 015222 321 --HENL-EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD--SMRAVWKLLRLPVIDLYSASPNCLCK 395 (411)
Q Consensus 321 --~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~--t~~~il~~~~~~~~~~~~~~~~~~~~ 395 (411)
.+.. -.++.|.+....+|..++.. +...++..|++||.+|-..+| .+.++..|+||..++|...+.+...+
T Consensus 459 ~d~ntedylfqvilekqiriprslsvk----as~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~v~p 534 (593)
T KOG0695|consen 459 PDMNTEDYLFQVILEKQIRIPRSLSVK----ASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQVLP 534 (593)
T ss_pred cccchhHHHHHHHhhhcccccceeehh----hHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcccCC
Confidence 1222 23344555555666665444 455556666677655555554 47899999999999998877776654
Q ss_pred HH
Q 015222 396 FY 397 (411)
Q Consensus 396 ~~ 397 (411)
.+
T Consensus 535 pf 536 (593)
T KOG0695|consen 535 PF 536 (593)
T ss_pred CC
Confidence 43
No 306
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.1e-40 Score=308.59 Aligned_cols=247 Identities=19% Similarity=0.294 Sum_probs=198.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~ 163 (411)
++|++.+.||+|+||.||++.+... ...||+|.+.... .....+.+|+.+++++ +|+++ +++++++.
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~~ 86 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLGVCT 86 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEEc
Confidence 5799999999999999999987644 3789999987532 3335677899999998 67766 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKN--------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~--------------~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~ 228 (411)
.++.++++|||+ +++|.+++... ....+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT 166 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc
Confidence 999999999999 99999999752 234689999999999999999999999999999999999998
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHH
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWS 303 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwS 303 (411)
.++ .++|+|||.+....... ....++..|+|||++.+..++.++||||
T Consensus 167 ~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 219 (293)
T cd05053 167 EDH---------------------------VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 219 (293)
T ss_pred CCC---------------------------eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceee
Confidence 776 55666666665433211 1123456799999998889999999999
Q ss_pred HHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 304 VGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 304 lGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|||++|||++ |..||.+....+....+...... ......+..+.+++.+|+..+ |.+|||+.+++++
T Consensus 220 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~----p~~Rps~~eil~~ 287 (293)
T cd05053 220 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRM---EKPQNCTQELYHLMRDCWHEV----PSQRPTFKQLVED 287 (293)
T ss_pred hhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcccC----cccCcCHHHHHHH
Confidence 9999999998 99999887766655554432211 122245677889999998888 9999999999875
No 307
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.2e-40 Score=310.59 Aligned_cols=252 Identities=23% Similarity=0.365 Sum_probs=206.3
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
|....+||+|+||.||++.+..+++.||||++.... .....+.+|+.+++.+.|+++ +++++.+...++.++||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcch-----hheeeEEEeCCEEEEEE
Confidence 444578999999999999999999999999986432 345567889999999988877 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++... .+++..+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~-------------------- 153 (292)
T cd06657 97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG-------------------- 153 (292)
T ss_pred ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--------------------
Confidence 999 88999887553 489999999999999999999999999999999999998776
Q ss_pred ccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
.++|+|||++...... .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.+.+..+...
T Consensus 154 -------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~ 226 (292)
T cd06657 154 -------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 226 (292)
T ss_pred -------CEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 4566666655433221 123467889999999988889999999999999999999999998877666555
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.+......... .....+..+.+++.+|+..+ |.+||++.++++|+||.....
T Consensus 227 ~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~----P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 227 MIRDNLPPKLK-NLHKVSPSLKGFLDRLLVRD----PAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHhhCCcccC-CcccCCHHHHHHHHHHHhCC----cccCcCHHHHhcChHHhccCC
Confidence 55443221111 12345677889999999888 999999999999999998774
No 308
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.3e-39 Score=301.00 Aligned_cols=247 Identities=23% Similarity=0.337 Sum_probs=199.4
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..++|++.++||+|+||.||+|.+. .+..||+|.+.......+.+.+|+.+++++.|+++ +++++.+.. ...+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~-~~~~ 76 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL-----VKLHAVVTK-EPIY 76 (260)
T ss_pred cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCc-----ceEEEEEcC-CCeE
Confidence 4578999999999999999999865 44569999987665556778899999999988887 899888877 7789
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||+ +++|.+++.+.....+++..+..++.||+.||.|||+.|++|+||||+||+++.++
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~----------------- 139 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL----------------- 139 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-----------------
Confidence 999999 88999999876555688999999999999999999999999999999999998766
Q ss_pred CccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
.++|+|||.+....... ....++..|+|||++.+..++.++|||||||++|++++ |..||.+.+.
T Consensus 140 ----------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~ 209 (260)
T cd05073 140 ----------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209 (260)
T ss_pred ----------cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH
Confidence 45666666554332111 11235667999999998889999999999999999999 9999988776
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+....+..... .......+..+.+++.+|++.+ |.+||++.++++.
T Consensus 210 ~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~l~~~ 256 (260)
T cd05073 210 PEVIRALERGYR---MPRPENCPEELYNIMMRCWKNR----PEERPTFEYIQSV 256 (260)
T ss_pred HHHHHHHhCCCC---CCCcccCCHHHHHHHHHHcccC----cccCcCHHHHHHH
Confidence 655554443221 1122346678899999999888 8889888888753
No 309
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.9e-40 Score=307.72 Aligned_cols=247 Identities=20% Similarity=0.289 Sum_probs=199.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|.+.+.||+|+||.||+|.+.. ++..|++|.+.... ...+.+.+|+.+++++.|+++ +++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI-----VKFYGVCGDG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccC
Confidence 469999999999999999998543 45679999986443 334568899999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 230 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~ 230 (411)
+..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 9999999999 999999997643 1248899999999999999999999999999999999999877
Q ss_pred cccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHH
Q 015222 231 EYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVG 305 (411)
Q Consensus 231 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 305 (411)
+ .++|+|||++...... .....++..|+|||++.+..++.++||||||
T Consensus 160 ~---------------------------~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 212 (291)
T cd05094 160 L---------------------------LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG 212 (291)
T ss_pred C---------------------------cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHH
Confidence 6 4566666665433221 1223567889999999998999999999999
Q ss_pred HHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 306 CILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 306 vil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|++|||++ |..||...+..+....+...... ......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 213 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~v~~~ 278 (291)
T cd05094 213 VILWEIFTYGKQPWFQLSNTEVIECITQGRVL---ERPRVCPKEVYDIMLGCWQRE----PQQRLNIKEIYKI 278 (291)
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC---CCCccCCHHHHHHHHHHcccC----hhhCcCHHHHHHH
Confidence 99999999 99999887776665554432221 122345677899999999888 8888888888764
No 310
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.9e-40 Score=301.24 Aligned_cols=246 Identities=24% Similarity=0.366 Sum_probs=200.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
.+|++.+.||+|+||.||+|.+.. +..+|+|++.........+.+|+++++++.|+++ +++++++......++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v 77 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKL-----VQLYGVCTERSPICLV 77 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCe-----eeEEEEEccCCceEEE
Confidence 469999999999999999998754 6679999987655555678899999999988776 9999999998999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.... ..++++.+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~------------------- 137 (256)
T cd05112 78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ------------------- 137 (256)
T ss_pred EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC-------------------
Confidence 9999 899999987654 3588999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||......+
T Consensus 138 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 209 (256)
T cd05112 138 --------VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE 209 (256)
T ss_pred --------eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH
Confidence 45666666655332211 11234568999999998899999999999999999998 999998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
....+......... ...+..+.+++.+|+..+ |++||++.+++++.
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~----p~~Rp~~~~~l~~l 255 (256)
T cd05112 210 VVETINAGFRLYKP---RLASQSVYELMQHCWKER----PEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHhCCCCCCCC---CCCCHHHHHHHHHHcccC----hhhCCCHHHHHHhh
Confidence 66665543222211 124677889999998888 99999999998753
No 311
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.6e-40 Score=305.14 Aligned_cols=246 Identities=21% Similarity=0.281 Sum_probs=195.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCc----EEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~----~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
.++|+++++||+|+||+||+|++..+++ .||+|+++.. ......+.+|+.+++.+.|+++ +.+++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~ 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV-----CRLLGICLT 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCC-----ceEEEEEcC
Confidence 3579999999999999999999877765 4899998643 2345667889999998888777 888888764
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
...+++|||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+++++
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~------------ 146 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN------------ 146 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC------------
Confidence 4578999999 999999997653 3689999999999999999999999999999999999997766
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCCc-----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL 317 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~p 317 (411)
.+||+|||++........ ...++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus 147 ---------------~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p 211 (279)
T cd05109 147 ---------------HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP 211 (279)
T ss_pred ---------------cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCC
Confidence 467777776654432211 1234678999999998899999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|...........+.... ..+. ....+..+.+++.+|+..| |+.||++.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~~l~~d----p~~Rp~~~~l~~~ 264 (279)
T cd05109 212 YDGIPAREIPDLLEKGE-RLPQ--PPICTIDVYMIMVKCWMID----SECRPRFRELVDE 264 (279)
T ss_pred CCCCCHHHHHHHHHCCC-cCCC--CccCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 98766655544444322 1111 2345677889999998888 9999999998854
No 312
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-40 Score=309.83 Aligned_cols=248 Identities=19% Similarity=0.234 Sum_probs=199.5
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
.+|++.++||+|+||.||+|.+..+ ++.||||+++... ...+.+.+|+.++..+.|++| +++++++..
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI-----VCLLGVVTK 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC
Confidence 3588899999999999999987543 5789999997433 234567889999999888877 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
.+..++++||+ +++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 99999999999 899999985321 124788899999999999999999999999999999999977
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHH
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSV 304 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 304 (411)
++ .+||+|||++....... ....+++.|+|||++.+..++.++|||||
T Consensus 160 ~~---------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 212 (283)
T cd05091 160 KL---------------------------NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY 212 (283)
T ss_pred CC---------------------------ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHH
Confidence 65 46666776655432111 12345778999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 305 GCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 305 Gvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||++|||++ |..||.+....+....+....... .....+..+.+++.+|++.+ |.+||++.++++..
T Consensus 213 G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~~cl~~~----p~~RP~~~~i~~~l 280 (283)
T cd05091 213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP---CPDDCPAWVYTLMLECWNEF----PSRRPRFKDIHSRL 280 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHhCCC----cccCCCHHHHHHHh
Confidence 999999998 999998877777666655433211 12346677889999998888 99999999998764
No 313
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=320.63 Aligned_cols=243 Identities=25% Similarity=0.366 Sum_probs=204.1
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+.+.|.+...+|.|+|+.|-.+.+..+++..++|++.+. .....+|+.++.... |+|+ +++.+.+.++.+.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~~h~ni-----v~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVRDHPNI-----VKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhcCCCcc-----eeecceecCCcee
Confidence 457899999999999999999999999999999999765 233455776666554 4554 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe-cCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~-~~~~~~l~df~~~~~~~~ 246 (411)
|+|||++ |+-|.+.+.... .....+..|+.+|+.|+.|||++|||||||||+|||++ +.|
T Consensus 392 ~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--------------- 453 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--------------- 453 (612)
T ss_pred eeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC---------------
Confidence 9999999 888888777664 33378888999999999999999999999999999994 554
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH-H
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-E 325 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~-~ 325 (411)
+++|+|||.+........+.+-|..|.|||++....|+.++||||||++||+||+|+.||...... +
T Consensus 454 ------------~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e 521 (612)
T KOG0603|consen 454 ------------HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE 521 (612)
T ss_pred ------------cEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH
Confidence 789999998887766544456688999999999889999999999999999999999999887665 2
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+. .. .+...+++.++++|+.||+.+ |..|+++.+++.|+|+
T Consensus 522 i~~~i~----~~--~~s~~vS~~AKdLl~~LL~~d----P~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 522 IHTRIQ----MP--KFSECVSDEAKDLLQQLLQVD----PALRLGADEIGAHPWF 566 (612)
T ss_pred HHHhhc----CC--ccccccCHHHHHHHHHhccCC----hhhCcChhhhccCcch
Confidence 222222 11 122678999999999999999 9999999999999999
No 314
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9e-40 Score=301.66 Aligned_cols=237 Identities=23% Similarity=0.314 Sum_probs=190.9
Q ss_pred eeccccceEEEEEEe--CCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 99 KMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~--~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+||+|+||.||+|.+ ..++..||+|+++... ...+.+.+|+.+++.+.|+++ +++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~-~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI-----VRMIGICE-AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEc-CCCcEEEEe
Confidence 689999999999965 4567899999986432 345678889999999988877 89988875 456799999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
|+ +++|.+++.... .+++..+..++.|++.||+|||++||+||||||+||+++.++
T Consensus 76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--------------------- 132 (257)
T cd05116 76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--------------------- 132 (257)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC---------------------
Confidence 99 889999997654 689999999999999999999999999999999999997766
Q ss_pred cCCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLE 325 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~ 325 (411)
.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||...+..+
T Consensus 133 ------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~ 206 (257)
T cd05116 133 ------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE 206 (257)
T ss_pred ------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 46667777665433221 11234578999999988889999999999999999998 999998877766
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
....+.+.... ......+..+.++|.+|++.+ |..||++.+|.+.
T Consensus 207 ~~~~i~~~~~~---~~~~~~~~~l~~li~~~~~~~----p~~Rp~~~~i~~~ 251 (257)
T cd05116 207 VTQMIESGERM---ECPQRCPPEMYDLMKLCWTYG----VDERPGFAVVELR 251 (257)
T ss_pred HHHHHHCCCCC---CCCCCCCHHHHHHHHHHhccC----chhCcCHHHHHHH
Confidence 66666543221 122346778999999998888 8899999888754
No 315
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=7.4e-40 Score=306.56 Aligned_cols=248 Identities=22% Similarity=0.317 Sum_probs=188.7
Q ss_pred CCCe-EEEeeeccccceEEEEEE----eCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 91 TPRY-RILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 91 ~~~y-~i~~~lG~G~~g~V~~a~----~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
.++| ++++.||+|+||+||++. ...++..||+|+++... .....+.+|+.+++.+.|+++ +++++++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~ 76 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI-----VKYKGCCS 76 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEe
Confidence 4566 999999999999998765 34567899999997543 345677889999999988877 99998876
Q ss_pred c--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccc
Q 015222 164 Y--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 164 ~--~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
. ...+++||||+ +++|.+++... .+++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 77 ~~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--------- 144 (283)
T cd05080 77 EQGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--------- 144 (283)
T ss_pred cCCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC---------
Confidence 5 34689999999 99999999775 499999999999999999999999999999999999998766
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 314 (411)
.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|||++|
T Consensus 145 ------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg 206 (283)
T cd05080 145 ------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTH 206 (283)
T ss_pred ------------------cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhC
Confidence 46666666665433221 112356679999999888899999999999999999999
Q ss_pred CCCCCCCChHH--HH---------HHHHH-HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 315 EALFQTHENLE--HL---------AMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 315 ~~pf~~~~~~~--~~---------~~i~~-~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
..||....... .. ..... .............+..+.+++.+|++.+ |+.||+++++++.
T Consensus 207 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rps~~~i~~~ 277 (283)
T cd05080 207 CDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE----AKFRPTFRSLIPI 277 (283)
T ss_pred CCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC----hhhCCCHHHHHHH
Confidence 99986533210 00 00000 0000000011234567889999998888 9999999998863
No 316
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.7e-40 Score=305.35 Aligned_cols=245 Identities=22% Similarity=0.292 Sum_probs=196.6
Q ss_pred eeeccccceEEEEEEeCCCCc-------EEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKE-------LVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~-------~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+.||+|+||.||+|.++.++. .||+|.+.... ...+.+.+|+.+++.+.|+|+ +++++++..++..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHL-----VLNYGVCVCGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCCh-----hheeeEEEeCCCcE
Confidence 468999999999999866544 48889886433 334567889999999888877 99999999888999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++..++.+++
T Consensus 76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~--------- 145 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPP--------- 145 (258)
T ss_pred EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCc---------
Confidence 999999 899999998754 368999999999999999999999999999999999999988866655554
Q ss_pred CccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhC-CCCCCCCChHHH
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSG-EALFQTHENLEH 326 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg-~~pf~~~~~~~~ 326 (411)
.++++|||.+..... .....++..|+|||++.+. .++.++|||||||++|||++| ..||...+....
T Consensus 146 ----------~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~ 214 (258)
T cd05078 146 ----------FIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK 214 (258)
T ss_pred ----------eEEecccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH
Confidence 579999998865433 2335688899999999874 589999999999999999998 577766555443
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.... .....+|.. .+..+.+++.+|++.+ |.+||+++++++.
T Consensus 215 ~~~~-~~~~~~~~~----~~~~~~~li~~~l~~~----p~~Rps~~~il~~ 256 (258)
T cd05078 215 LQFY-EDRHQLPAP----KWTELANLINQCMDYE----PDFRPSFRAIIRD 256 (258)
T ss_pred HHHH-HccccCCCC----CcHHHHHHHHHHhccC----hhhCCCHHHHHHh
Confidence 3322 222333332 3356789999998888 9999999999875
No 317
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-39 Score=300.70 Aligned_cols=243 Identities=20% Similarity=0.267 Sum_probs=197.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
++|++.+.||+|+||.||++. .+++.||+|+++... ..+.+.+|+.++++++|+++ +++++++... ..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~-~~~~v 76 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHHKNL-----VRLLGVILHN-GLYIV 76 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhCCCCCc-----CeEEEEEcCC-CcEEE
Confidence 569999999999999999985 467889999986533 34568889999999988877 9999888654 57999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++.++
T Consensus 77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~------------------- 137 (254)
T cd05083 77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG------------------- 137 (254)
T ss_pred EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC-------------------
Confidence 9999 89999999876555689999999999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~ 329 (411)
.++|+|||++............+..|+|||.+.+..++.++|||||||++|+|++ |+.||...+..+....
T Consensus 138 --------~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 209 (254)
T cd05083 138 --------VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC 209 (254)
T ss_pred --------cEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 5677777766544332223344567999999988899999999999999999998 9999988777665555
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.+..... .....+..+.+++.+|++.+ |..||+++++++.
T Consensus 210 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~ 250 (254)
T cd05083 210 VEKGYRME---PPEGCPADVYVLMTSCWETE----PKKRPSFHKLREK 250 (254)
T ss_pred HhCCCCCC---CCCcCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 54432111 12345678889999998888 9999999998865
No 318
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=6.3e-40 Score=308.99 Aligned_cols=250 Identities=22% Similarity=0.318 Sum_probs=196.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC--------------cEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcce
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK--------------ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRC 155 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~--------------~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~i 155 (411)
++|++.+.||+|+||.||+|++..++ ..||+|+++.. ......+.+|+++++++.|+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i----- 79 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNI----- 79 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCc-----
Confidence 58999999999999999999875432 35899998753 2344568899999999998877
Q ss_pred EEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCc
Q 015222 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY----------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224 (411)
Q Consensus 156 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~N 224 (411)
+++++++...+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||++|++|+||||+|
T Consensus 80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N 159 (295)
T cd05097 80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN 159 (295)
T ss_pred CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence 99999999999999999999 8999999865321 136888999999999999999999999999999999
Q ss_pred EEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccc
Q 015222 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPC 299 (411)
Q Consensus 225 Ili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~ 299 (411)
|+++.++ .+||+|||++....... ....++..|+|||++.+..++.++
T Consensus 160 ill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 212 (295)
T cd05097 160 CLVGNHY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTAS 212 (295)
T ss_pred EEEcCCC---------------------------cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchh
Confidence 9998766 45666666654332111 122456789999999988999999
Q ss_pred hhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhCC----CChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHH
Q 015222 300 DLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLGP----LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRA 373 (411)
Q Consensus 300 DiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~~----~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~ 373 (411)
|||||||++|+|++ |..||...+..+.+..+...... .........+..+.+++.+|+..+ |.+||++.+
T Consensus 213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~----p~~RPs~~~ 288 (295)
T cd05097 213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRD----IKDRPTFNK 288 (295)
T ss_pred hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCC----chhCcCHHH
Confidence 99999999999998 77899877766655544332110 101112234577999999999888 999999999
Q ss_pred HHhc
Q 015222 374 VWKL 377 (411)
Q Consensus 374 il~~ 377 (411)
+++.
T Consensus 289 i~~~ 292 (295)
T cd05097 289 IHHF 292 (295)
T ss_pred HHHH
Confidence 9764
No 319
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.9e-40 Score=305.54 Aligned_cols=244 Identities=25% Similarity=0.379 Sum_probs=193.5
Q ss_pred EEEeeeccccceEEEEEEeC----CCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 95 RILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~----~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.+.+.||.|.||.||+|... ..+..|+||+++.. ....+.+.+|++.+++++|+|| +++++++...+..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~g~~~~~~~~ 76 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNI-----VKLYGFCIENEPL 76 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTB-----E-EEEEEESSSSE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccc-----ccccccccccccc
Confidence 56789999999999999988 45678999999643 2346788999999999999888 9999999988889
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++||||+ +++|.+++.......+++..+..|+.||+.||.|||+++|+|+||+++|||++.++
T Consensus 77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~---------------- 140 (259)
T PF07714_consen 77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG---------------- 140 (259)
T ss_dssp EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT----------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------
Confidence 9999999 88999999987445799999999999999999999999999999999999998877
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH 321 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~ 321 (411)
.+||+|||++...... .....+...|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus 141 -----------~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~ 209 (259)
T PF07714_consen 141 -----------QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY 209 (259)
T ss_dssp -----------EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred -----------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 5666677666544211 112345678999999998889999999999999999999 78999988
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+..+....+.+..... ....++..+.+++.+|+..+ |.+||+++++++.
T Consensus 210 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~C~~~~----p~~RPs~~~i~~~ 258 (259)
T PF07714_consen 210 DNEEIIEKLKQGQRLP---IPDNCPKDIYSLIQQCWSHD----PEKRPSFQEILQE 258 (259)
T ss_dssp CHHHHHHHHHTTEETT---SBTTSBHHHHHHHHHHT-SS----GGGS--HHHHHHH
T ss_pred ccccccccccccccce---eccchhHHHHHHHHHHcCCC----hhhCcCHHHHHhc
Confidence 7777776664433211 12345667788888886666 9999999999864
No 320
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.9e-41 Score=321.84 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=214.9
Q ss_pred CCe-EEEeeeccccceEEEEEEeCCCCcEEEEEEec-----cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y-~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~-----~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+|| +....||+|+|-+||+|.|..+|..||.-.++ +.....+.+..|+.+|+.|+|+|| +++++++.+.
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NI-----irfy~SW~d~ 113 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNI-----IRFYDSWVDT 113 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCce-----eeeeeheecC
Confidence 344 45678999999999999999999988865443 334455889999999999999988 9999998875
Q ss_pred C--eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCccc
Q 015222 166 N--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 166 ~--~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
. .+.+|+|++ .|+|..|+.+.+ .++...++.|++||+.||.|||++. |||||||-+||||+.
T Consensus 114 ~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG----------- 180 (632)
T KOG0584|consen 114 DNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG----------- 180 (632)
T ss_pred CCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-----------
Confidence 4 589999999 999999999887 7999999999999999999999985 999999999999964
Q ss_pred ccccCCCCCccccCCCCCCeeEeecCCcccccCCC-cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 241 LSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
..+.|||+|+|+|....... ...+|||.|||||+.. ..|+..+||||||+.+.||+|+.+||.
T Consensus 181 ---------------~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs 244 (632)
T KOG0584|consen 181 ---------------NLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS 244 (632)
T ss_pred ---------------CcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh
Confidence 34589999999999876554 4469999999999998 689999999999999999999999998
Q ss_pred CCCh-HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 320 THEN-LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 320 ~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.... .++++++. .|..|..+..--++++++||.+||.. .+.|+++.|+|+|+||...+.
T Consensus 245 EC~n~AQIYKKV~--SGiKP~sl~kV~dPevr~fIekCl~~-----~~~R~sa~eLL~d~Ff~~d~g 304 (632)
T KOG0584|consen 245 ECTNPAQIYKKVT--SGIKPAALSKVKDPEVREFIEKCLAT-----KSERLSAKELLKDPFFDEDGG 304 (632)
T ss_pred hhCCHHHHHHHHH--cCCCHHHhhccCCHHHHHHHHHHhcC-----chhccCHHHHhhChhhccccc
Confidence 6544 34444443 45667777777788999999999876 578999999999999997643
No 321
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.2e-39 Score=304.73 Aligned_cols=247 Identities=20% Similarity=0.289 Sum_probs=198.7
Q ss_pred CCeEEEeeeccccceEEEEEEeC-----CCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|++.++||+|+||.||+|... .++..||+|.+.... ...+.+.+|+.+++.+.|+|+ +++++++.+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHI-----VRFYGVCTEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCC-----ceEEEEEecC
Confidence 57899999999999999999743 356789999886433 445678899999999988877 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSY-------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
+..+++|||+ +++|.+++..... ..+++..+..++.||+.||+|||+.||+||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 9999999999 9999999976431 2488999999999999999999999999999999999998766
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||
T Consensus 160 ---------------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 212 (280)
T cd05092 160 ---------------------------VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGV 212 (280)
T ss_pred ---------------------------CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHH
Confidence 45666666654322111 1234567899999999989999999999999
Q ss_pred HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
++|||++ |..||......+....+...... .....++..+.+++.+|+..+ |.+||++.++++.
T Consensus 213 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~----P~~Rp~~~~l~~~ 277 (280)
T cd05092 213 VLWEIFTYGKQPWYQLSNTEAIECITQGREL---ERPRTCPPEVYAIMQGCWQRE----PQQRMVIKDIHSR 277 (280)
T ss_pred HHHHHHcCCCCCCccCCHHHHHHHHHcCccC---CCCCCCCHHHHHHHHHHccCC----hhhCCCHHHHHHH
Confidence 9999998 99999877766655555433221 112345677899999998888 9999999998764
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.6e-39 Score=297.71 Aligned_cols=249 Identities=26% Similarity=0.418 Sum_probs=207.1
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+|++.++||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.++|+++ +++++++......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI-----ISYKEAFLDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCc-----hhhhhhhccCCEEE
Confidence 5899999999999999999999999999999987532 334566789999999988877 99999999899999
Q ss_pred EEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+||||+ +++|.+++.+.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--------------- 140 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--------------- 140 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC---------------
Confidence 999999 899999987621 24689999999999999999999999999999999999998765
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHH
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLE 325 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~ 325 (411)
.++|+|||++...... .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+
T Consensus 141 ------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~ 208 (256)
T cd08530 141 ------------LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD 208 (256)
T ss_pred ------------cEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 5677777776654332 222457889999999998889999999999999999999999998877655
Q ss_pred HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 326 HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 326 ~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
....+.... .+. .....+..+.+++.+|+..+ |..||++.++++||++
T Consensus 209 ~~~~~~~~~--~~~-~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 209 LRYKVQRGK--YPP-IPPIYSQDLQNFIRSMLQVK----PKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHhcCC--CCC-CchhhCHHHHHHHHHHcCCC----cccCCCHHHHhcCCCC
Confidence 544443322 221 22356778999999999999 9999999999999974
No 323
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.9e-40 Score=306.49 Aligned_cols=252 Identities=24% Similarity=0.350 Sum_probs=199.5
Q ss_pred CeEEEeeeccccceEEEEEEeC---CCCcEEEEEEeccch-----hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~---~~~~~vavK~~~~~~-----~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~ 163 (411)
+|++.+.||+|+||.||+|++. .+++.||||+++... ...+.+.+|+.++.++. |+++ +++++.+.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i-----~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL-----VTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcch-----hhhheeee
Confidence 4889999999999999999864 467889999987432 23455778999999995 5665 89999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
.++..++||||+ +++|.+++.... .+++..++.++.|++.||.|||+.|++||||||+||+++.++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~----------- 142 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG----------- 142 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC-----------
Confidence 999999999999 889999987654 689999999999999999999999999999999999997765
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCC--CCccchhHHHHHHHHHHHhCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLG--WNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~--~~~~~DiwSlGvil~elltg~~ 316 (411)
.++|+|||++....... ....|+..|+|||.+.+.. .+.++||||||+++|+|++|..
T Consensus 143 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~ 206 (288)
T cd05583 143 ----------------HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGAS 206 (288)
T ss_pred ----------------CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCC
Confidence 56777777765432221 2246888999999987764 7899999999999999999999
Q ss_pred CCCCCChH----HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHH---HHHHHhcCCCCccccc
Q 015222 317 LFQTHENL----EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDS---MRAVWKLLRLPVIDLY 386 (411)
Q Consensus 317 pf~~~~~~----~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t---~~~il~~~~~~~~~~~ 386 (411)
||...... +....+.......+ ...+..+.+++.+|++.+ |+.||| +.++++|+||+++.+.
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~----p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 207 PFTVDGEQNSQSEISRRILKSKPPFP----KTMSAEARDFIQKLLEKD----PKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred CcccCcccchHHHHHHHHHccCCCCC----cccCHHHHHHHHHHhcCC----HhhccCcchHHHHhcCcccccCCHH
Confidence 99643322 22222222222222 335677899999999999 777776 6778999999998864
No 324
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.9e-39 Score=301.19 Aligned_cols=246 Identities=21% Similarity=0.318 Sum_probs=198.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc---EEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~---~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
++|+..+.||+|+||.||+|.++.++. .||+|.++.. ....+.+..|+.+++++.|+++ +++.+++...+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI-----IRLEGVVTKFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCe-----eEEEEEEccCC
Confidence 578999999999999999999876654 7999998753 2345667889999999988776 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~-------------- 144 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL-------------- 144 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--------------
Confidence 999999999 889999997653 3689999999999999999999999999999999999998766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.++|+|||++........ ....+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 145 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~ 211 (268)
T cd05063 145 -------------ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPY 211 (268)
T ss_pred -------------cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCC
Confidence 456666665543322111 1123457999999998889999999999999999998 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
...+..+....+.... ..|. ....+..+.+++.+|+..+ |..||++.++++.
T Consensus 212 ~~~~~~~~~~~i~~~~-~~~~--~~~~~~~~~~li~~c~~~~----p~~Rp~~~~i~~~ 263 (268)
T cd05063 212 WDMSNHEVMKAINDGF-RLPA--PMDCPSAVYQLMLQCWQQD----RARRPRFVDIVNL 263 (268)
T ss_pred CcCCHHHHHHHHhcCC-CCCC--CCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHH
Confidence 8777766666555432 2221 2245677889999998888 8899999998864
No 325
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-39 Score=298.98 Aligned_cols=245 Identities=22% Similarity=0.304 Sum_probs=201.2
Q ss_pred eEEEeeeccccceEEEEEEeCCCC----cEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~----~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+++.+.||.|+||.||+|.+...+ ..||+|+++.... ..+.+..|+.+++.+.|+++ +++++++.+.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-----VKLLGVCTEEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-----heEEEEEcCCCe
Confidence 357789999999999999998766 8999999975443 46678899999999988777 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.+++|||+ +++|.+++.......+++..+..++.||+.||+|||+.|++|+||||+||++++++
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--------------- 140 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--------------- 140 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC---------------
Confidence 99999999 89999999875533389999999999999999999999999999999999998776
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCc----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHS----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTH 321 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~ 321 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 141 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~ 208 (258)
T smart00219 141 ------------VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM 208 (258)
T ss_pred ------------eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence 456666666554332211 1236788999999988889999999999999999998 89999887
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+..+....+....... .....+..+.+++.+|+..+ |.+|||+.++++.
T Consensus 209 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~----p~~Rpt~~~ll~~ 257 (258)
T smart00219 209 SNEEVLEYLKKGYRLP---KPENCPPEIYKLMLQCWAED----PEDRPTFSELVEI 257 (258)
T ss_pred CHHHHHHHHhcCCCCC---CCCcCCHHHHHHHHHHCcCC----hhhCcCHHHHHhh
Confidence 7766666655433221 12236778899999999999 9999999999864
No 326
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.6e-39 Score=303.84 Aligned_cols=245 Identities=20% Similarity=0.229 Sum_probs=189.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc----EEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
++|++.+.||+|+||+||+|.+..+++ .|++|.+.... .....+..|+.+++++.|+|+ +++++++. +
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~i-----v~~~~~~~-~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYI-----VRLLGICP-G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEC-C
Confidence 579999999999999999999877776 47778775322 233556677778887777766 99999875 4
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
...++++||+ +++|.+++.... ..+++..+..++.||+.||+|||++|++||||||+|||++.++
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~------------- 146 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS------------- 146 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC-------------
Confidence 5678899999 999999998654 3689999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.+||+|||.+...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 147 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 147 --------------IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred --------------cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 5566666666543211 122346778999999998899999999999999999998 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+.........+......... ...+..+.+++.+|+..+ |..||++.++++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~c~~~~----p~~Rps~~el~~~ 264 (279)
T cd05111 213 AGMRPHEVPDLLEKGERLAQP---QICTIDVYMVMVKCWMID----ENVRPTFKELANE 264 (279)
T ss_pred CCCCHHHHHHHHHCCCcCCCC---CCCCHHHHHHHHHHcCCC----cccCcCHHHHHHH
Confidence 887665544444332211111 123456777888887777 8888999988764
No 327
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-39 Score=307.72 Aligned_cols=249 Identities=17% Similarity=0.265 Sum_probs=198.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeC-------CCCcEEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN 160 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~-------~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~ 160 (411)
.++|++.+.||+|+||.||+|++. .++..||+|.+... ......+.+|+.+++.+ .|+|+ +++++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~ 88 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLG 88 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCc-----hheeE
Confidence 467999999999999999999753 23457999998743 23446788999999999 67776 99999
Q ss_pred eeecCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcE
Q 015222 161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI 225 (411)
Q Consensus 161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NI 225 (411)
++...+..++||||+ +++|.+++.+.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 999999999999999 889999998642 12478888999999999999999999999999999999
Q ss_pred EEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccch
Q 015222 226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCD 300 (411)
Q Consensus 226 li~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D 300 (411)
|++.++ .++|+|||.+...... .....++..|+|||++.+..++.++|
T Consensus 169 li~~~~---------------------------~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (304)
T cd05101 169 LVTENN---------------------------VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD 221 (304)
T ss_pred EEcCCC---------------------------cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence 998766 4566666666543221 11224567899999999888999999
Q ss_pred hHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 301 LWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 301 iwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||||||++|+|++ |..||.+.+..+....+..... .......+..+.+++.+|+..+ |..||++.++++.+
T Consensus 222 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~----p~~Rps~~e~l~~l 293 (304)
T cd05101 222 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAI----PSHRPTFKQLVEDL 293 (304)
T ss_pred HHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcccC----hhhCCCHHHHHHHH
Confidence 9999999999998 8999988777666655543221 1112346678899999998888 88899999998763
No 328
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-40 Score=318.76 Aligned_cols=283 Identities=23% Similarity=0.305 Sum_probs=222.6
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
-|..++.||-|+||.|.+++...|...+|+|.+++.+ ........|-.||.....+-+ |+++-.|.+.+.+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WV-----VrLyySFQDkdnL 704 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL 704 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcce-----EEEEEEeccCCce
Confidence 4788999999999999999999999999999997643 233445678888888766655 9999999999999
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC-
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK- 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~- 246 (411)
|+||+|+ ||++..+|-+.+ .|.|+.++.++..+..|+++.|..|+|||||||+|||||.+|++||+||||+.-+..
T Consensus 705 YFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999 999999998876 799999999999999999999999999999999999999999999999999876654
Q ss_pred -CCCccccCCCC------CCeeEeecCCccc-cc---------CCCcccccCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 247 -DGSYFKNLPKS------SAIKLIDFGSTTF-EH---------QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 247 -~~~~~~~~~~~------~~~kl~Dfg~a~~-~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
+.++|.+.+.. ..-..+|-+-+.. .. -.....+||+.|+|||++....|+..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 34444422110 0111122221110 00 0113368999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH---HHHHHHhcCCCCccccc
Q 015222 310 ELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD---SMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 310 elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~---t~~~il~~~~~~~~~~~ 386 (411)
||+.|++||...+..+...++.+....+....-.+++.++.++|.++.. . ++.|. .++++..|+||+.|++.
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-s----ad~RLGkng~d~vKaHpfFkgIDfs 937 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-S----ADSRLGKNGADQVKAHPFFKGIDFS 937 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-C----hhhhhcccchhhhhcCccccccchH
Confidence 9999999999887766655555444433333445778888888887632 2 44553 46789999999999987
Q ss_pred C
Q 015222 387 S 387 (411)
Q Consensus 387 ~ 387 (411)
+
T Consensus 938 s 938 (1034)
T KOG0608|consen 938 S 938 (1034)
T ss_pred h
Confidence 6
No 329
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-39 Score=301.71 Aligned_cols=244 Identities=16% Similarity=0.210 Sum_probs=191.7
Q ss_pred EEEeeeccccceEEEEEEeCCCCc--EEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-----
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----- 164 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----- 164 (411)
.+.+.||+|+||.||+|.+..++. .||+|.++.. ....+.+.+|+.+++.++|+|+ +++++++..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~ 76 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV-----MRLIGVCLQTVESE 76 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEccCCccc
Confidence 467899999999999999887765 6999998643 3345667889999999988887 888886532
Q ss_pred -CCeEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCc
Q 015222 165 -RNHICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238 (411)
Q Consensus 165 -~~~~~lv~e~~-~~~L~~~l~~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df 238 (411)
....+++|||+ +++|.+++... ....+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 77 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~------- 149 (272)
T cd05075 77 GYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENM------- 149 (272)
T ss_pred CCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCC-------
Confidence 23579999999 89999987532 123589999999999999999999999999999999999997766
Q ss_pred ccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh
Q 015222 239 KFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 313 (411)
.++|+|||++....... ....+++.|+|||.+.+..++.++|||||||++|||++
T Consensus 150 --------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~ 209 (272)
T cd05075 150 --------------------NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209 (272)
T ss_pred --------------------CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence 46666666665433221 12245678999999999899999999999999999999
Q ss_pred -CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 314 -GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 314 -g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|+.||.+.+..+....+...... + .....+..+.+++.+|+..+ |.+||++.+++++
T Consensus 210 ~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~li~~~l~~~----p~~Rps~~~l~~~ 267 (272)
T cd05075 210 RGQTPYPGVENSEIYDYLRQGNRL-K--QPPDCLDGLYSLMSSCWLLN----PKDRPSFETLRCE 267 (272)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCC-C--CCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHH
Confidence 89999887766655555443221 1 12245667889999998888 9999999999875
No 330
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=348.54 Aligned_cols=253 Identities=27% Similarity=0.381 Sum_probs=210.4
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEecc---chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.-+|+-..+||.|.||.||-|.+..+|+..|+|-++- ..+....+.+|..++..++|+|+ |+++++-.+.
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNl-----V~YyGVEvHR 1306 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNL-----VRYYGVEVHR 1306 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccc-----cccCceeecH
Confidence 344578888999999999999999999999999998863 23445667889999999999988 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+.++|.|||| +|+|.+.+...+ ..++-..+.+..|++.||.|||+.|||||||||+||+++.+|
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g------------- 1371 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG------------- 1371 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC-------------
Confidence 9999999999 999999998765 577888889999999999999999999999999999999888
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC-------cccccCCCccccceecCC---CCCccchhHHHHHHHHHHHhC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-------SYVVSTRHYRAPEVILGL---GWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltg 314 (411)
.+|++|||.|....... ....||+.|||||++.+. .-..++||||||||+.||+||
T Consensus 1372 --------------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tG 1437 (1509)
T KOG4645|consen 1372 --------------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATG 1437 (1509)
T ss_pred --------------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecC
Confidence 45666666665433222 346899999999999875 356899999999999999999
Q ss_pred CCCCCCCChH-HHHHHHHHH-hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcc
Q 015222 315 EALFQTHENL-EHLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVI 383 (411)
Q Consensus 315 ~~pf~~~~~~-~~~~~i~~~-~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~ 383 (411)
+.||...+.. .++..+..+ .+++|.. ++.+.++||.+||..| |+.|-++.|+++|.|-+.-
T Consensus 1438 krPW~~~dne~aIMy~V~~gh~Pq~P~~----ls~~g~dFle~Cl~~d----P~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1438 KRPWAELDNEWAIMYHVAAGHKPQIPER----LSSEGRDFLEHCLEQD----PKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred CCchhhccchhHHHhHHhccCCCCCchh----hhHhHHHHHHHHHhcC----chhhhHHHHHHHhhccccc
Confidence 9999876543 333333332 2345554 7888999999999999 9999999999999987653
No 331
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.2e-39 Score=301.20 Aligned_cols=246 Identities=16% Similarity=0.213 Sum_probs=194.5
Q ss_pred eEEEeeeccccceEEEEEEeCCC---CcEEEEEEeccch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC-
Q 015222 94 YRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN- 166 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~- 166 (411)
|++.+.||+|+||.||+|.+..+ +..||+|+++... .....+.+|+.+++.+.|+++ +++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~ 75 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNV-----MKLIGVCFEASS 75 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEeeeccCCc
Confidence 57889999999999999987653 4789999987432 334567889999999988877 99998775544
Q ss_pred -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 015222 167 -----HICIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 167 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
..+++|||+ +++|..++.... ...+++..+..++.|++.||.|||++||+||||||+||++++++
T Consensus 76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~----- 150 (273)
T cd05035 76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDM----- 150 (273)
T ss_pred cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCC-----
Confidence 489999999 999999985432 23689999999999999999999999999999999999997766
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHH
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 311 (411)
.+||+|||.+....... ....++..|+|||.+.+..++.++|||||||++|||
T Consensus 151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el 208 (273)
T cd05035 151 ----------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 208 (273)
T ss_pred ----------------------eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHH
Confidence 45666666665432221 112346689999999888899999999999999999
Q ss_pred Hh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
++ |..||.+.+..+....+.... ........+..+.+++.+|++.+ |.+||++.+++++.
T Consensus 209 ~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~e~~~~l 269 (273)
T cd05035 209 ATRGQTPYPGVENHEIYDYLRHGN---RLKQPEDCLDELYDLMYSCWRAD----PKDRPTFTKLREVL 269 (273)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCC---CCCCCcCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHH
Confidence 99 999998877666555444322 11223456778999999998888 99999999998753
No 332
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-39 Score=302.25 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=197.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC---cEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.+|++.+.||+|+||.||+|.++.++ ..||+|.++.. ....+.+.+|+.+++++.|+|+ +++++++..++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCC
Confidence 57999999999999999999986554 37999998643 2345678889999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+|||++.++
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~-------------- 143 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL-------------- 143 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--------------
Confidence 999999999 899999998754 3689999999999999999999999999999999999998766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++||+++ |..||
T Consensus 144 -------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~ 210 (267)
T cd05066 144 -------------VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 210 (267)
T ss_pred -------------eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCc
Confidence 456666665544322111 1123567999999998899999999999999999887 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
...+..+....+.+.. ..+ .....+..+.+++.+|++.+ |..||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 262 (267)
T cd05066 211 WEMSNQDVIKAIEEGY-RLP--APMDCPAALHQLMLDCWQKD----RNERPKFEQIVSI 262 (267)
T ss_pred ccCCHHHHHHHHhCCC-cCC--CCCCCCHHHHHHHHHHcccC----chhCCCHHHHHHH
Confidence 8877666555554432 112 12345677899999999888 8888888888754
No 333
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-39 Score=306.93 Aligned_cols=248 Identities=19% Similarity=0.295 Sum_probs=197.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-------CCcEEEEEEeccch--hhhHHHHHHHHHHHHH-hcCCCCCcceEEEeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW 161 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~ 161 (411)
++|.+.++||+|+||.||+|++.. ....||+|.++... .....+..|+.+++++ .|+|+ ++++++
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~ 86 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNI-----INLLGV 86 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCe-----eeEEEE
Confidence 589999999999999999998632 34579999987532 3345677899999988 47766 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 226 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIl 226 (411)
+.+++.+++||||+ +++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 99889999999999 899999997642 135889999999999999999999999999999999999
Q ss_pred EecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchh
Q 015222 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDL 301 (411)
Q Consensus 227 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di 301 (411)
++.++ .+||+|||.++...... ....++..|+|||++.+..++.++||
T Consensus 167 l~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 219 (314)
T cd05099 167 VTEDN---------------------------VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDV 219 (314)
T ss_pred EcCCC---------------------------cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchh
Confidence 98766 56777777665433211 11234467999999998899999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 302 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
|||||++|+|++ |..||.+.+..+....+..... .......+..+.+++.+|+..+ |..||++.++++..
T Consensus 220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~----p~~Rps~~~ll~~l 290 (314)
T cd05099 220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR---MDKPSNCTHELYMLMRECWHAV----PTQRPTFKQLVEAL 290 (314)
T ss_pred hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCC----cccCcCHHHHHHHH
Confidence 999999999999 9999988776666655544221 1112345667889999999999 88889999888754
No 334
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7e-41 Score=333.07 Aligned_cols=247 Identities=22% Similarity=0.349 Sum_probs=206.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
.+-+..++||+|.||+||+|+... ....||||.++... ..+.+|++|++++..++|+|| |++++++..
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nI-----VrLlGVC~~ 560 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNI-----VRLLGVCRE 560 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCe-----EEEEEEEcc
Confidence 456778999999999999997643 34689999998543 467899999999999999988 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcC--------CCC----CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNS--------YRS----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~--------~~~----l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
++.+|+|+||| .|+|.+||.... ... |+..+...|+.||+.|++||-++.+|||||-..|+||+++
T Consensus 561 ~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~- 639 (774)
T KOG1026|consen 561 GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN- 639 (774)
T ss_pred CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc-
Confidence 99999999999 999999997542 122 8899999999999999999999999999999999999764
Q ss_pred ccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccc-----cCCCccccceecCCCCCccchhHHHHH
Q 015222 232 YVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV-----STRHYRAPEVILGLGWNYPCDLWSVGC 306 (411)
Q Consensus 232 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----gt~~y~aPE~~~~~~~~~~~DiwSlGv 306 (411)
..|||+|||+++.......+.+ -.+.|||||.|..++|+++|||||+||
T Consensus 640 --------------------------l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GV 693 (774)
T KOG1026|consen 640 --------------------------LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGV 693 (774)
T ss_pred --------------------------eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhh
Confidence 4788888888876554443322 257899999999999999999999999
Q ss_pred HHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 307 ILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 307 il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+|||+++ |+.||.+.++.+.++.+..... ++ ...+++.++..++..| |.+.|.+||++.||-..
T Consensus 694 vLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~--~Pe~CP~~vY~LM~~C----W~~~P~~RPsF~eI~~~ 758 (774)
T KOG1026|consen 694 VLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LS--CPENCPTEVYSLMLEC----WNENPKRRPSFKEIHSR 758 (774)
T ss_pred hhhhhhccccCcccccchHHHHHHHHcCCc-cc--CCCCCCHHHHHHHHHH----hhcCcccCCCHHHHHHH
Confidence 9999999 9999999999999999987643 21 2234555666666555 88889999999998654
No 335
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.6e-39 Score=306.33 Aligned_cols=255 Identities=22% Similarity=0.335 Sum_probs=199.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+.|++.+.||+|+||.||+|.+..+++.||||+++... .....+..|+.++.+.. |++ ++++++++......
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-----i~~~~~~~~~~~~~ 89 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPY-----IVKCYGYFITDSDV 89 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCc-----hHhhheeeecCCeE
Confidence 57999999999999999999999999999999997532 23344556776665554 555 49999999999999
Q ss_pred EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|+||||++++|.+++.... ..+++..+..++.||+.||+|||+ .||+||||+|+||+++.++
T Consensus 90 ~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~---------------- 152 (296)
T cd06618 90 FICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG---------------- 152 (296)
T ss_pred EEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC----------------
Confidence 9999999888888876643 378999999999999999999997 5999999999999997766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCC----CCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLG----WNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~----~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.++|+|||.+...... .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...
T Consensus 153 -----------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 221 (296)
T cd06618 153 -----------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC 221 (296)
T ss_pred -----------CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence 5677777766543221 12235788999999997654 789999999999999999999999764
Q ss_pred Ch-HHHHHHHHHHh-CCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccc
Q 015222 322 EN-LEHLAMMERVL-GPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDL 385 (411)
Q Consensus 322 ~~-~~~~~~i~~~~-~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~ 385 (411)
.. .+.+..+.... ...+. ....+..+.+++.+|+..+ |..||++.++++|+|+.....
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~----p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 222 KTEFEVLTKILQEEPPSLPP--NEGFSPDFCSFVDLCLTKD----HRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred hhHHHHHHHHhcCCCCCCCC--CCCCCHHHHHHHHHHccCC----hhhCCCHHHHhcChhhhccch
Confidence 33 23333222211 11111 1135677899999999988 999999999999999997554
No 336
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.4e-39 Score=318.11 Aligned_cols=248 Identities=21% Similarity=0.285 Sum_probs=194.9
Q ss_pred CCeEEEeeeccccceEEEEEEeC-----CCCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~-----~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~ 163 (411)
++|.+.++||+|+||.||+|++. .+++.||||+++... ...+.+.+|+.++.++. |+|+ +++++.+.
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~ni-----v~~~~~~~ 111 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI-----VNLLGACT 111 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCe-----EEEEEEEc
Confidence 46889999999999999999864 345689999997532 23346788999999997 7766 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcCC------------------------------------------------------
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNSY------------------------------------------------------ 188 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------------------------------------------------ 188 (411)
..+..++||||+ +|+|.+++.+...
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 999999999999 9999999975421
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 015222 189 ------------------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 226 (411)
Q Consensus 189 ------------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIl 226 (411)
..+++..+..++.||+.||+|||+.||+||||||+|||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL 271 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL 271 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence 23677788999999999999999999999999999999
Q ss_pred EecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCccchh
Q 015222 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYPCDL 301 (411)
Q Consensus 227 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di 301 (411)
++.++ .++|+|||++...... .....++..|+|||.+.+..++.++||
T Consensus 272 l~~~~---------------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 272 ICEGK---------------------------LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EeCCC---------------------------EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 98765 5677777776543211 122356788999999998889999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 302 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|||||++|||++ |..||......+............ ......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~----P~~RPs~~ell~~ 395 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM--AKPAHASDEIYEIMQKCWEEK----FEIRPDFSQLVHL 395 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCC----hhHCcCHHHHHHH
Confidence 999999999998 899998765544433322211111 112345678889999887777 9999999999875
No 337
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.8e-39 Score=297.81 Aligned_cols=239 Identities=27% Similarity=0.426 Sum_probs=202.5
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
||.|+||.||++.+..+++.||+|++..... ....+..|+.+++++.|+++ +++++.++.++..|+|||++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFI-----VKLHYAFQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcH-----HHHHHHeecCCeeEEEEecC
Confidence 6999999999999998899999999875432 34577889999999998877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++
T Consensus 76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~----------------------- 130 (250)
T cd05123 76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG----------------------- 130 (250)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC-----------------------
Confidence 999999998765 689999999999999999999999999999999999997766
Q ss_pred CCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||.+...... .....++..|+|||.+.+...+.++|+||||+++|+|++|..||...+..+....+.
T Consensus 131 ----~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~ 206 (250)
T cd05123 131 ----HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL 206 (250)
T ss_pred ----cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 5788888877654332 234567889999999988888999999999999999999999998777655555554
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH---HHHHhcCCC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM---RAVWKLLRL 380 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~---~~il~~~~~ 380 (411)
.....++.. .+..+.+++.+|+..+ |..||++ +++++|+||
T Consensus 207 ~~~~~~~~~----~~~~l~~~i~~~l~~~----p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 207 KDPLRFPEF----LSPEARDLISGLLQKD----PTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred cCCCCCCCC----CCHHHHHHHHHHhcCC----HhhCCCcccHHHHHhCCCC
Confidence 433333333 3677899999999998 8888888 999999997
No 338
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.6e-39 Score=308.88 Aligned_cols=255 Identities=19% Similarity=0.196 Sum_probs=191.6
Q ss_pred cceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCH
Q 015222 104 TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL 179 (411)
Q Consensus 104 ~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L 179 (411)
++|.||.+++..+++.||||+++.. ....+.+.+|+.+++.++|+|+ +++++++...+..+++|||+ +++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNI-----LPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcch-----hhhhheeecCCeEEEEEeccCCCCH
Confidence 4456666677779999999998743 3445678899999999988877 99999999999999999999 8999
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCC
Q 015222 180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSA 259 (411)
Q Consensus 180 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~ 259 (411)
.+++.......+++..+..++.||+.||+|||++||+||||||+||+++.+|.++++||+........+.. .
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------~ 158 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------Q 158 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccc--------c
Confidence 99998765456899999999999999999999999999999999999998886666666543222111000 0
Q ss_pred eeEeecCCcccccCCCcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC--
Q 015222 260 IKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLG-- 335 (411)
Q Consensus 260 ~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~-- 335 (411)
...........++..|+|||++.+. .++.++|||||||++|||++|..||........+........
T Consensus 159 ---------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (314)
T cd08216 159 ---------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPC 229 (314)
T ss_pred ---------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcc
Confidence 0000111223567889999998764 588999999999999999999999987654433221111000
Q ss_pred ----------------------------CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 336 ----------------------------PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 336 ----------------------------~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
..+.......+..+.+++.+||..+ |++||+++++++||||..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 230 LLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRD----PESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred ccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcC----CCcCcCHHHHhcCchHhhhc
Confidence 0111112234567888999998888 99999999999999998765
No 339
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.5e-39 Score=300.70 Aligned_cols=246 Identities=23% Similarity=0.350 Sum_probs=197.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc---EEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~---~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
+.|++.+.||+|+||.||+|.++.+++ .||||+++.. ......+..|+.+++.+.|+|+ +++++++..++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-----ceEEEEECCCC
Confidence 468999999999999999999887664 6999998753 3345678899999999988877 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
..++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~-------------- 143 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL-------------- 143 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--------------
Confidence 999999999 889999987654 3689999999999999999999999999999999999997766
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCc-----c-c--ccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----Y-V--VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEA 316 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~-~--~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~ 316 (411)
.++|+|||.+........ . . ..+..|+|||.+.+..++.++|||||||++|||++ |..
T Consensus 144 -------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 144 -------------VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred -------------cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence 456666665543322110 0 1 12457999999998899999999999999999887 999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||...+..+....+.... ..| .....+..+.+++.+|+..+ |.+||++.+++..
T Consensus 211 p~~~~~~~~~~~~i~~~~-~~~--~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 264 (269)
T cd05065 211 PYWDMSNQDVINAIEQDY-RLP--PPMDCPTALHQLMLDCWQKD----RNARPKFGQIVST 264 (269)
T ss_pred CCCCCCHHHHHHHHHcCC-cCC--CcccCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 998877766666554322 111 12345667888999998888 8899999998864
No 340
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.7e-39 Score=298.37 Aligned_cols=238 Identities=22% Similarity=0.288 Sum_probs=191.0
Q ss_pred eeeccccceEEEEEEeCCCC---cEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKK---ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~---~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
++||+|+||.||+|.+..++ ..||+|.+..... ..+.+.+|+.+++.+.|+++ +++++++. .+..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~-~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI-----VRLIGVCK-GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEc-CCceEEEE
Confidence 47999999999999876554 7899999975443 45678889999999988776 99998876 45789999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.... .+++..+..++.|++.||+|||+.|++|+||||+|||++.++
T Consensus 75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~-------------------- 132 (257)
T cd05060 75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH-------------------- 132 (257)
T ss_pred EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--------------------
Confidence 999 899999998765 689999999999999999999999999999999999998877
Q ss_pred ccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|+|++ |..||...+..
T Consensus 133 -------~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~ 205 (257)
T cd05060 133 -------QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA 205 (257)
T ss_pred -------cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH
Confidence 456666665554322211 1123467999999998899999999999999999998 99999887766
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+....+..... .......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 206 ~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~----p~~Rp~~~~l~~~ 251 (257)
T cd05060 206 EVIAMLESGER---LPRPEECPQEIYSIMLSCWKYR----PEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCc---CCCCCCCCHHHHHHHHHHhcCC----hhhCcCHHHHHHH
Confidence 55555443321 1222345678899999999998 8899999988764
No 341
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.8e-39 Score=298.07 Aligned_cols=242 Identities=22% Similarity=0.294 Sum_probs=194.7
Q ss_pred eeeccccceEEEEEEeCC-CC--cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~-~~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|++|.||+|.+.. .+ ..||||.+.... ...+.+.+|+.++++++|+|+ +++++.+.. ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL-----IRLYGVVLT-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCc-----cceeEEEcC-CeEEEEE
Confidence 468999999999999865 33 369999997543 345678899999999988887 999999887 8999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
||+ +++|.+++.......+++..++.++.|++.||+|||++|++|+||||+||+++.++.+
T Consensus 75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~------------------ 136 (257)
T cd05040 75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKV------------------ 136 (257)
T ss_pred EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEE------------------
Confidence 999 9999999987643468999999999999999999999999999999999999887744
Q ss_pred ccCCCCCCeeEeecCCcccccCC------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQD------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENL 324 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~ 324 (411)
||+|||++...... .....++..|+|||.+.+..++.++|||||||++|||++ |..||...+..
T Consensus 137 ---------kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 207 (257)
T cd05040 137 ---------KIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS 207 (257)
T ss_pred ---------EeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 55555554433221 112356778999999998899999999999999999999 99999877777
Q ss_pred HHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 325 EHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 325 ~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+....+.......+ .....+..+.+++.+|+..+ |++||++.++++..
T Consensus 208 ~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~----p~~Rps~~~~~~~l 255 (257)
T cd05040 208 QILKKIDKEGERLE--RPEACPQDIYNVMLQCWAHN----PADRPTFAALREFL 255 (257)
T ss_pred HHHHHHHhcCCcCC--CCccCCHHHHHHHHHHCCCC----cccCCCHHHHHHHh
Confidence 66666554222221 12345678889999998888 99999999998653
No 342
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.6e-39 Score=300.37 Aligned_cols=248 Identities=27% Similarity=0.412 Sum_probs=200.7
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
+|.+.++||+|+||.||++.+..++..+++|+++... .....+..|+.+++.++|+|+ +++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAI-----VKFHASFLERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcH-----HHHHHHHhcCC
Confidence 6999999999999999999998887778788775321 223456678889998888877 99999999889
Q ss_pred eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
..++||||+ +++|.+++... ....+++..++.++.|++.||.|||+.|++|+||||+||++++ +
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~------------ 142 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-N------------ 142 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-C------------
Confidence 999999999 88999988642 2246999999999999999999999999999999999999964 2
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||..
T Consensus 143 ---------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~ 207 (260)
T cd08222 143 ---------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEG 207 (260)
T ss_pred ---------------CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 4677777776543222 1234678899999999888889999999999999999999999987
Q ss_pred CChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.+.......+.. +. ........+..+.+++.+|+..+ |++||++.++++|+||
T Consensus 208 ~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 208 QNFLSVVLRIVE--GP-TPSLPETYSRQLNSIMQSMLNKD----PSLRPSAAEILRNPFI 260 (260)
T ss_pred ccHHHHHHHHHc--CC-CCCCcchhcHHHHHHHHHHhcCC----hhhCcCHHHHhhCCCC
Confidence 655444443332 22 22233456778899999998888 9999999999999997
No 343
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.9e-39 Score=304.38 Aligned_cols=257 Identities=17% Similarity=0.211 Sum_probs=183.5
Q ss_pred eCCccCCCeEEEeeeccccceEEEEEEeCCC---CcEEEEEEeccchhhh--HH-------HHHHHHHHHHHhcCCCCCc
Q 015222 86 IGENLTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYR--EA-------AMIEIDVLQRLARHDIGGT 153 (411)
Q Consensus 86 ~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~--~~-------~~~E~~~l~~l~~~~i~~~ 153 (411)
+.+...++|++.+.||+|+||+||+|.+..+ +..+|+|+........ +. ...++..+. ...++.|+
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~~~~h~ 83 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWK--NIHNIDHL 83 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHH--HhccCCCC
Confidence 3455668999999999999999999998887 6778888754222110 00 011122222 22345666
Q ss_pred ceEEEeeeeecCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 154 RCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 154 ~iv~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
+++.+++...... ..+++|+++..++.+.+.... ..++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 84 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 84 GIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDG 161 (294)
T ss_pred CCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 7788888655432 568899998778888776643 4678889999999999999999999999999999999977
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccC----------CCcccccCCCccccceecCCCCCccc
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ----------DHSYVVSTRHYRAPEVILGLGWNYPC 299 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~ 299 (411)
++ .++|+|||+|+.... ......||+.|+|||++.+..++.++
T Consensus 162 ~~---------------------------~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~ 214 (294)
T PHA02882 162 NN---------------------------RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRG 214 (294)
T ss_pred CC---------------------------cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHH
Confidence 66 566777776654321 11224699999999999999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-HhCCC--ChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHH
Q 015222 300 DLWSVGCILVELCSGEALFQTHENL-EHLAMMER-VLGPL--PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375 (411)
Q Consensus 300 DiwSlGvil~elltg~~pf~~~~~~-~~~~~i~~-~~~~~--p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il 375 (411)
|||||||++|||++|+.||.+.... +....... ....+ +.......++.+.+++..|+..+ |.+||++.+++
T Consensus 215 DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~rp~~~~l~ 290 (294)
T PHA02882 215 DLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLS----YEEKPDYDALI 290 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCC----CCCCCCHHHHH
Confidence 9999999999999999999876332 22211110 00000 11112334667888888888887 99999999987
Q ss_pred hc
Q 015222 376 KL 377 (411)
Q Consensus 376 ~~ 377 (411)
+.
T Consensus 291 ~~ 292 (294)
T PHA02882 291 KI 292 (294)
T ss_pred Hh
Confidence 63
No 344
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-39 Score=309.13 Aligned_cols=249 Identities=18% Similarity=0.276 Sum_probs=197.7
Q ss_pred CCeEEEeeeccccceEEEEEEeCCC-------CcEEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW 161 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~-------~~~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~ 161 (411)
.+|++.+.||+|+||.||+|++... +..||+|+++.. ....+.+.+|+.+++++ .|+|| ++++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~ 86 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNI-----INLLGA 86 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCe-----eeeeEE
Confidence 5799999999999999999986432 236999988743 23456788899999999 67776 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 226 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIl 226 (411)
+..++..+++|||+ +++|.+++.+.. ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 166 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL 166 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence 99999999999999 889999997642 134788899999999999999999999999999999999
Q ss_pred EecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchh
Q 015222 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDL 301 (411)
Q Consensus 227 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di 301 (411)
++.++ .++|+|||+++...... ....++..|+|||++.+..++.++||
T Consensus 167 l~~~~---------------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 219 (334)
T cd05100 167 VTEDN---------------------------VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 219 (334)
T ss_pred EcCCC---------------------------cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhh
Confidence 98766 45666666655432211 11234567999999999899999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 302 WSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 302 wSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
|||||++|||++ |..||.+.+..+....+..... .......+..+.+++.+|++.+ |.+||++.+++++..
T Consensus 220 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~----p~~Rps~~ell~~l~ 291 (334)
T cd05100 220 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTHELYMIMRECWHAV----PSQRPTFKQLVEDLD 291 (334)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcccC----hhhCcCHHHHHHHHH
Confidence 999999999998 8999988776666555543221 1122345667889999999888 888889999888753
No 345
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=4.4e-39 Score=297.22 Aligned_cols=239 Identities=23% Similarity=0.311 Sum_probs=188.9
Q ss_pred eeccccceEEEEEEeC--CCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 99 KMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
.||+|+||.||+|.+. .++..||+|++.... ...+.+.+|+.+++++.|+++ +++++++. .+..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----i~~~~~~~-~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI-----VRMIGVCE-AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEc-CCCeEEEEEe
Confidence 4899999999999765 455679999987543 334668899999999988877 99999876 4578999999
Q ss_pred C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcccc
Q 015222 175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKN 253 (411)
Q Consensus 175 ~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~ 253 (411)
+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++
T Consensus 76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~---------------------- 132 (257)
T cd05115 76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH---------------------- 132 (257)
T ss_pred CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC----------------------
Confidence 9 899999987543 3689999999999999999999999999999999999998766
Q ss_pred CCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHH
Q 015222 254 LPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEH 326 (411)
Q Consensus 254 ~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~ 326 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus 133 -----~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 207 (257)
T cd05115 133 -----YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV 207 (257)
T ss_pred -----cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH
Confidence 45666666655332211 11123568999999988889999999999999999996 9999988777666
Q ss_pred HHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 327 LAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 327 ~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...+..... .......+..+.+++.+|+..+ |.+||++.++.+..
T Consensus 208 ~~~~~~~~~---~~~~~~~~~~l~~li~~c~~~~----~~~Rp~~~~i~~~l 252 (257)
T cd05115 208 MSFIEQGKR---LDCPAECPPEMYALMKDCWIYK----WEDRPNFAKVEERM 252 (257)
T ss_pred HHHHHCCCC---CCCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHH
Confidence 555544321 1122345678889999998888 88889999987653
No 346
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3e-39 Score=304.49 Aligned_cols=251 Identities=21% Similarity=0.304 Sum_probs=195.0
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC----------------CCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG 152 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~----------------~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~ 152 (411)
.++|++.++||+|+||.||+|.+.. ++..||+|+++.. ......+.+|+.+++.+.|+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-- 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNI-- 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc--
Confidence 3579999999999999999986543 3457999999743 2345678899999999988877
Q ss_pred cceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 015222 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY---------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 222 (411)
Q Consensus 153 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp 222 (411)
+++++++...+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+.||+|+||||
T Consensus 82 ---~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp 158 (296)
T cd05095 82 ---IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT 158 (296)
T ss_pred ---ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence 99999999999999999999 8999999976431 2467789999999999999999999999999999
Q ss_pred CcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCc
Q 015222 223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNY 297 (411)
Q Consensus 223 ~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~ 297 (411)
+|||++.++ .++|+|||++....... ....++..|+|||...++.++.
T Consensus 159 ~Nili~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~ 211 (296)
T cd05095 159 RNCLVGKNY---------------------------TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTT 211 (296)
T ss_pred heEEEcCCC---------------------------CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccc
Confidence 999998766 56667777665432211 1123467899999988888999
Q ss_pred cchhHHHHHHHHHHHh--CCCCCCCCChHHHHHHHHHHhC----CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHH
Q 015222 298 PCDLWSVGCILVELCS--GEALFQTHENLEHLAMMERVLG----PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSM 371 (411)
Q Consensus 298 ~~DiwSlGvil~ellt--g~~pf~~~~~~~~~~~i~~~~~----~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~ 371 (411)
++|||||||++|||++ |..||...+..+.......... ..........+..+.+++.+|+..+ |.+||++
T Consensus 212 ~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rp~~ 287 (296)
T cd05095 212 ASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRN----AKERPSF 287 (296)
T ss_pred hhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCC----cccCCCH
Confidence 9999999999999998 7899987666555443322110 0000011234567889999998888 9999999
Q ss_pred HHHHhc
Q 015222 372 RAVWKL 377 (411)
Q Consensus 372 ~~il~~ 377 (411)
.++++.
T Consensus 288 ~~i~~~ 293 (296)
T cd05095 288 QEIHAT 293 (296)
T ss_pred HHHHHH
Confidence 998764
No 347
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.2e-39 Score=303.35 Aligned_cols=246 Identities=17% Similarity=0.276 Sum_probs=195.8
Q ss_pred CeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 93 RYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
+|++.+.||+|+||.||+|.+.. ....||+|.+.... .....+.+|+.+++.+.|+|+ +++++.+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV-----IKLYGACSQD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecC
Confidence 48899999999999999998753 23579999886433 234567889999999988776 9999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP 222 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp 222 (411)
+..+++|||+ +++|.+++.... ...+++..+..++.|++.||+|||+.||+||||||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp 155 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA 155 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhh
Confidence 9999999999 899999986431 12478899999999999999999999999999999
Q ss_pred CcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCc
Q 015222 223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNY 297 (411)
Q Consensus 223 ~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~ 297 (411)
+|||+++++ .++|+|||++....... ....++..|+|||.+.+..++.
T Consensus 156 ~nill~~~~---------------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~ 208 (290)
T cd05045 156 RNVLVAEGR---------------------------KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT 208 (290)
T ss_pred heEEEcCCC---------------------------cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence 999997766 56677777665432211 1224567899999998888999
Q ss_pred cchhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 298 PCDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 298 ~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
++||||||+++|||++ |..||.+....+....+....... .....+..+.+++.+|++.+ |.+||++.++++
T Consensus 209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~cl~~~----P~~Rp~~~~i~~ 281 (290)
T cd05045 209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRME---RPENCSEEMYNLMLTCWKQE----PDKRPTFADISK 281 (290)
T ss_pred HhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCC---CCCCCCHHHHHHHHHHccCC----cccCCCHHHHHH
Confidence 9999999999999998 999998877666555444322111 12345678889999999888 889999999875
Q ss_pred c
Q 015222 377 L 377 (411)
Q Consensus 377 ~ 377 (411)
.
T Consensus 282 ~ 282 (290)
T cd05045 282 E 282 (290)
T ss_pred H
Confidence 4
No 348
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.5e-39 Score=299.84 Aligned_cols=250 Identities=19% Similarity=0.272 Sum_probs=200.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
++|++++.||+|+||.||+|+.+. +.+.||+|.+..... ..+.+.+|+.+++++.|+++ +++++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-----VRLLGLCRE 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-----eeeEEEECC
Confidence 579999999999999999999754 346799999864332 35678899999999988877 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSY-------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
.+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~---- 155 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQRE---- 155 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCc----
Confidence 89999999999 8999999976541 15899999999999999999999999999999999999988774
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
++|+|||.+...... .....++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 156 -----------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 156 -----------------------VKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212 (275)
T ss_pred -----------------------EEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 555566555432111 12235567899999998888899999999999999999
Q ss_pred h-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCC
Q 015222 313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLR 379 (411)
Q Consensus 313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~ 379 (411)
+ |..||...........+.......+ .....+..+.+++.+|+..+ |..||++.++++..+
T Consensus 213 ~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~----p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 213 TQGELPFYGLSDEEVLNRLQAGKLELP--VPEGCPSRLYKLMTRCWAVN----PKDRPSFSELVSALG 274 (275)
T ss_pred hCCCCCccccchHHHHHHHHcCCcCCC--CCCCCCHHHHHHHHHHcCCC----cccCCCHHHHHHHhc
Confidence 9 8999987666665555443222221 12345678899999999988 999999999987653
No 349
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.1e-39 Score=302.60 Aligned_cols=248 Identities=21% Similarity=0.298 Sum_probs=189.8
Q ss_pred CeEEEeeeccccceEEEEEEe----CCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-
Q 015222 93 RYRILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR- 165 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~----~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~- 165 (411)
-|++++.||+|+||.||+|.. ..++..||+|.++.. ......+.+|+.+++.+.|+|+ +++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~ 79 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI-----VKYKGICTEDG 79 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEecCC
Confidence 479999999999999999974 457889999998743 2344678899999999988877 9999888764
Q ss_pred -CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 166 -NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 166 -~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
...++||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~------------ 146 (284)
T cd05079 80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH------------ 146 (284)
T ss_pred CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC------------
Confidence 5789999999 999999997654 3589999999999999999999999999999999999998776
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 147 ---------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~ 211 (284)
T cd05079 147 ---------------QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDS 211 (284)
T ss_pred ---------------CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCC
Confidence 45666666655432211 123567789999999988899999999999999999998776
Q ss_pred CCCCCh-----------HHHHH-HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 318 FQTHEN-----------LEHLA-MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 318 f~~~~~-----------~~~~~-~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+..... ..... .+...............+..+.+++.+|++.+ |.+||+++++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~----p~~Rpt~~~il~~ 279 (284)
T cd05079 212 ESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQ----PSKRTTFQNLIEG 279 (284)
T ss_pred CccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCC----cccCcCHHHHHHH
Confidence 532110 00000 01111111111112345678999999999999 9999999999875
No 350
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.5e-39 Score=302.00 Aligned_cols=247 Identities=18% Similarity=0.267 Sum_probs=197.6
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-----CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-----~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
++|++.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+|+.+++++.|+++ +++++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----v~~~~~~~~ 79 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI-----VKLLGVCAV 79 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCch-----heEEEEEcC
Confidence 579999999999999999998753 67889999987432 334668889999999988877 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNS--------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE 223 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~ 223 (411)
++..++||||+ +++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 89999999999 889999997532 124788899999999999999999999999999999
Q ss_pred cEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCCCCCcc
Q 015222 224 NILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGLGWNYP 298 (411)
Q Consensus 224 NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~ 298 (411)
|||++.++ .++|+|||.+...... .....++..|+|||.+.+..++.+
T Consensus 160 nil~~~~~---------------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (288)
T cd05050 160 NCLVGENM---------------------------VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTE 212 (288)
T ss_pred heEecCCC---------------------------ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCch
Confidence 99998776 4566666655432211 111234567999999998899999
Q ss_pred chhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 299 CDLWSVGCILVELCS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 299 ~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+|||||||++|||++ |..||.+.+..+....+...... + .....+..+.+++.+|+..+ |.+||++.|+++.
T Consensus 213 ~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~~l~~~----p~~Rpt~~el~~~ 285 (288)
T cd05050 213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-S--CPDNCPLELYNLMRLCWSKL----PSDRPSFASINRI 285 (288)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-C--CCCCCCHHHHHHHHHHcccC----cccCCCHHHHHHH
Confidence 999999999999998 88999877776665555433211 1 11245677899999999988 9999999998764
No 351
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-39 Score=310.31 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=190.0
Q ss_pred CCeEEEeeeccccceEEEEEEe-----CCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~-----~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~ 163 (411)
++|++.+.||+|+||.||+|.+ ..+++.||||+++... .....+.+|+.++.++. |+|+ +++++++.
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~~ 81 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGACT 81 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccH-----hhhcceee
Confidence 6899999999999999999985 3467899999997532 33456788999999995 4555 99998775
Q ss_pred c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 015222 164 Y-RNHICIVFEKL-GPSLYDFLRKNSY----------------------------------------------------- 188 (411)
Q Consensus 164 ~-~~~~~lv~e~~-~~~L~~~l~~~~~----------------------------------------------------- 188 (411)
. ++.+++||||+ +++|.+++.....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 45789999999 9999999875320
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCC
Q 015222 189 ------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256 (411)
Q Consensus 189 ------------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 256 (411)
..+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~------------------------- 216 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN------------------------- 216 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC-------------------------
Confidence 1367788899999999999999999999999999999997765
Q ss_pred CCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH-H
Q 015222 257 SSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA-M 329 (411)
Q Consensus 257 ~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~-~ 329 (411)
.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.......... .
T Consensus 217 --~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 294 (343)
T cd05103 217 --VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 294 (343)
T ss_pred --cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH
Confidence 56777777665432211 11235677999999988899999999999999999997 999997754433222 2
Q ss_pred HHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 330 MERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 330 i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+..... ..| ...+..+.+++.+|++.+ |.+||++.++++|.
T Consensus 295 ~~~~~~~~~~----~~~~~~~~~~~~~cl~~~----p~~Rps~~eil~~l 336 (343)
T cd05103 295 LKEGTRMRAP----DYTTPEMYQTMLDCWHGE----PSQRPTFSELVEHL 336 (343)
T ss_pred HhccCCCCCC----CCCCHHHHHHHHHHccCC----hhhCcCHHHHHHHH
Confidence 222111 111 124556788888887777 99999999999874
No 352
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.9e-39 Score=298.45 Aligned_cols=241 Identities=21% Similarity=0.266 Sum_probs=189.5
Q ss_pred eeeccccceEEEEEEeCCCCc--EEEEEEeccc--hhhhHHHHHHHHHHHHH-hcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~--~vavK~~~~~--~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+.||+|+||.||+|++..++. .+|+|.++.. ....+.+.+|+.+++++ .|+++ +++++++...+..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCe-----eeEEEEEecCCCceEEE
Confidence 368999999999999988775 4688988742 33456788899999999 56666 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 015222 173 EKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~--------------~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~d 237 (411)
||+ +++|.+++.... ...+++..+..++.|++.||+|||+.|++||||||+|||++.++
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~------ 149 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY------ 149 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCC------
Confidence 999 899999997542 12478999999999999999999999999999999999998766
Q ss_pred cccccccCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-C
Q 015222 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-G 314 (411)
Q Consensus 238 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g 314 (411)
.++|+|||++....... .....+..|+|||++.+..++.++|||||||++|||++ |
T Consensus 150 ---------------------~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g 208 (270)
T cd05047 150 ---------------------VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 208 (270)
T ss_pred ---------------------eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 45666666654222111 11123567999999988889999999999999999997 9
Q ss_pred CCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 315 EALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 315 ~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
..||.+.+..+....+.... ........+..+.+++.+|+..+ |.+||++.++++.
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~il~~ 264 (270)
T cd05047 209 GTPYCGMTCAELYEKLPQGY---RLEKPLNCDDEVYDLMRQCWREK----PYERPSFAQILVS 264 (270)
T ss_pred CCCccccCHHHHHHHHhCCC---CCCCCCcCCHHHHHHHHHHcccC----hhhCCCHHHHHHH
Confidence 99998776655555443321 11112235667889999998888 8899999998864
No 353
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9e-39 Score=297.06 Aligned_cols=246 Identities=22% Similarity=0.280 Sum_probs=197.2
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCC---CcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.++|.+.+.||+|+||.||+|.+... ...||||..... ....+.+.+|+.+++++.|+|+ +++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~- 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-----VKLIGVITE- 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-----hceeEEEcC-
Confidence 35699999999999999999987654 356999988743 3445678899999999988877 999998875
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+.|++|+||||+|||++.++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~------------- 144 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD------------- 144 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC-------------
Confidence 5578999999 899999997654 3589999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ 319 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~ 319 (411)
.++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 145 --------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~ 210 (270)
T cd05056 145 --------------CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQ 210 (270)
T ss_pred --------------CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCC
Confidence 46666666665432221 11234567999999988889999999999999999996 999998
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.+..+....+.+.... ......+..+.+++.+|+..+ |.+||++.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~----P~~Rpt~~~~~~~ 261 (270)
T cd05056 211 GVKNNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYD----PSKRPRFTELKAQ 261 (270)
T ss_pred CCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 87776666555443221 112345678999999999888 8888999888765
No 354
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1e-38 Score=298.29 Aligned_cols=244 Identities=21% Similarity=0.303 Sum_probs=194.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc----EEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+|++.+.||+|+||.||+|.++.+++ .||+|.+.... .....+.+|+.+++++.|+|+ +++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHV-----VRLLGICLS- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEec-
Confidence 579999999999999999999877664 58999887543 344677889999999988877 999998876
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~------------- 146 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ------------- 146 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC-------------
Confidence 7899999999 999999998754 3589999999999999999999999999999999999998766
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCCc-----ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS-----YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 147 --------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 212 (279)
T cd05057 147 --------------HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred --------------eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCC
Confidence 456666666554332211 1123567999999988889999999999999999999 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
.+....+....+..... .+. ....+..+.+++.+|+..+ |..||++.++++
T Consensus 213 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~l~~~----p~~Rp~~~~l~~ 263 (279)
T cd05057 213 EGIPAVEIPDLLEKGER-LPQ--PPICTIDVYMVLVKCWMID----AESRPTFKELIN 263 (279)
T ss_pred CCCCHHHHHHHHhCCCC-CCC--CCCCCHHHHHHHHHHcCCC----hhhCCCHHHHHH
Confidence 88776665555543221 111 1234567888999998888 888888888764
No 355
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.6e-39 Score=298.13 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=189.1
Q ss_pred eeccccceEEEEEEeCCC------------------------CcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCc
Q 015222 99 KMGEGTFGQVVECFDNEK------------------------KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT 153 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~------------------------~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~ 153 (411)
.||+|+||.||+|....+ ...||+|++.... .....+.+|+.+++.+.|+|+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni--- 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHL--- 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCe---
Confidence 689999999999974321 2458999986433 234567778889988888777
Q ss_pred ceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 015222 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232 (411)
Q Consensus 154 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~ 232 (411)
+++++++......++||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+|||++..+.
T Consensus 79 --v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 79 --AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred --eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence 99999999999999999999 899998887643 36899999999999999999999999999999999999987542
Q ss_pred cccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecC-CCCCccchhHHHHHHHHHH
Q 015222 233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVEL 311 (411)
Q Consensus 233 ~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~el 311 (411)
. ......++++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++|||
T Consensus 156 ~--------------------~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el 214 (274)
T cd05076 156 A--------------------EGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214 (274)
T ss_pred c--------------------cCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHH
Confidence 1 012235799999987543222 22357888999999876 4689999999999999999
Q ss_pred H-hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 312 C-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 312 l-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
+ +|..||......+....+.. ....|. .....+.+++.+|++.+ |+.||++.++++++
T Consensus 215 ~~~g~~p~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~li~~cl~~~----p~~Rps~~~il~~L 273 (274)
T cd05076 215 CFDGEVPLKERTPSEKERFYEK-KHRLPE----PSCKELATLISQCLTYE----PTQRPSFRTILRDL 273 (274)
T ss_pred HhCCCCCccccChHHHHHHHHh-ccCCCC----CCChHHHHHHHHHcccC----hhhCcCHHHHHHhh
Confidence 5 69999987665544333222 222332 13356788999998877 99999999999864
No 356
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3.3e-39 Score=294.43 Aligned_cols=228 Identities=20% Similarity=0.267 Sum_probs=181.4
Q ss_pred ccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCHHH
Q 015222 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD 181 (411)
Q Consensus 103 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~ 181 (411)
|.+|.||+|+++.+++.||+|.+..... ..+|...+....| +|++++++++...+..++||||+ +++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCV-----PNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCC-----CceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 8999999999999999999999976432 2234444433334 45599999999999999999999 899999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCee
Q 015222 182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIK 261 (411)
Q Consensus 182 ~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~k 261 (411)
++.+.. .+++..+..++.|++.||+|||++||+||||||+||+++.++ .++
T Consensus 75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~---------------------------~~~ 125 (237)
T cd05576 75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG---------------------------HIQ 125 (237)
T ss_pred HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC---------------------------CEE
Confidence 998765 599999999999999999999999999999999999998766 567
Q ss_pred EeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Q 015222 262 LIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHM 341 (411)
Q Consensus 262 l~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~ 341 (411)
|+|||.+...........++..|+|||.+.+..++.++||||+||++|||++|..||....... .. .....+|
T Consensus 126 l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--~~--~~~~~~~--- 198 (237)
T cd05576 126 LTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--NT--HTTLNIP--- 198 (237)
T ss_pred EecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--cc--ccccCCc---
Confidence 7777766544443334456778999999988889999999999999999999999886432210 00 0001122
Q ss_pred HHhhhhhhhhhhccCCccCCCCCCCcHHHH-----HHHHhcCCC
Q 015222 342 VIRADRRAEKYFRRGARLDWPDGATSRDSM-----RAVWKLLRL 380 (411)
Q Consensus 342 ~~~~~~~~~~li~~~l~~~~~~rp~~R~t~-----~~il~~~~~ 380 (411)
..++..+.++|.+||+.| |.+|+++ +++++||||
T Consensus 199 -~~~~~~~~~li~~~l~~d----p~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 199 -EWVSEEARSLLQQLLQFN----PTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred -ccCCHHHHHHHHHHccCC----HHHhcCCCccchHHHHcCCCC
Confidence 345677899999999999 8888774 999999997
No 357
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.1e-38 Score=295.50 Aligned_cols=245 Identities=20% Similarity=0.217 Sum_probs=188.1
Q ss_pred eeeccccceEEEEEEeCC------------CCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 98 SKMGEGTFGQVVECFDNE------------KKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~------------~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
+.||+|+||.||+|+... ....||+|++.... .....+.+|+.+++.+.|+|+ +++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~i-----v~~~~~~~~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHI-----VLLYGVCVR 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec
Confidence 468999999999997532 23368999886533 234466778889999988777 999999998
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
....++||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++..
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~---------- 144 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGID---------- 144 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCcc----------
Confidence 88999999999 889988887543 368999999999999999999999999999999999999876521
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec-CCCCCccchhHHHHHHHHHHH-hCCCCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-GLGWNYPCDLWSVGCILVELC-SGEALFQTH 321 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwSlGvil~ell-tg~~pf~~~ 321 (411)
......++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||...
T Consensus 145 ----------~~~~~~~~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (262)
T cd05077 145 ----------GECGPFIKLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDK 213 (262)
T ss_pred ----------CCCCceeEeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCc
Confidence 012234899999988654322 2346788999999987 457899999999999999998 589999765
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
...+.... ........ ...+..+.+++.+|++.+ |.+||++.+++++.
T Consensus 214 ~~~~~~~~-~~~~~~~~----~~~~~~~~~li~~cl~~d----p~~Rp~~~~il~~~ 261 (262)
T cd05077 214 TLAEKERF-YEGQCMLV----TPSCKELADLMTHCMNYD----PNQRPFFRAIMRDI 261 (262)
T ss_pred chhHHHHH-HhcCccCC----CCChHHHHHHHHHHcCCC----hhhCcCHHHHHHhc
Confidence 54333221 11111111 122456788999998888 99999999998763
No 358
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=313.90 Aligned_cols=246 Identities=23% Similarity=0.343 Sum_probs=198.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCc---E-EEEEEecc----chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKE---L-VAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~---~-vavK~~~~----~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
+-.+.++||+|+||.||+|..+..+. . ||||..+. ......++.+|++++++++|+|| |+++|+..+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV-----Vr~yGVa~~ 232 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV-----VRFYGVAVL 232 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEcC
Confidence 33456899999999999998876432 3 89999874 24566788999999999999888 999999999
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
+..+++|||+| ||+|.++|++... .++..+...++.+.+.||+|||++++|||||-.+|+|++.++
T Consensus 233 ~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~------------ 299 (474)
T KOG0194|consen 233 EEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG------------ 299 (474)
T ss_pred CCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC------------
Confidence 99999999999 9999999998873 699999999999999999999999999999999999998766
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCC--Cc-ccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HS-YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ 319 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~ 319 (411)
.+||+|||+++....- .. ...-...|+|||.+....|++++|||||||++||+++ |..||.
T Consensus 300 ---------------~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~ 364 (474)
T KOG0194|consen 300 ---------------VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYP 364 (474)
T ss_pred ---------------eEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCC
Confidence 4577777776654311 11 1123568999999999999999999999999999999 899999
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+....+....+.......+.. ...+..+..++.+| |...|+.|+++.++.+.
T Consensus 365 g~~~~~v~~kI~~~~~r~~~~--~~~p~~~~~~~~~c----~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 365 GMKNYEVKAKIVKNGYRMPIP--SKTPKELAKVMKQC----WKKDPEDRPTMSTIKKK 416 (474)
T ss_pred CCCHHHHHHHHHhcCccCCCC--CCCHHHHHHHHHHh----ccCChhhccCHHHHHHH
Confidence 999988888885433222211 13344455555555 55559999999988764
No 359
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7e-39 Score=297.46 Aligned_cols=246 Identities=18% Similarity=0.283 Sum_probs=195.1
Q ss_pred eeeccccceEEEEEEeCCCC------cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 98 SKMGEGTFGQVVECFDNEKK------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+.||+|+||.||+|+++... +.||+|.+.... .....+.+|+.+++.+.|+++ +++++++...+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNI-----VKLLGVCLLNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCe-----eeEeeeecCCCCeE
Confidence 36899999999999886544 689999886433 345677889999999988877 99999999889999
Q ss_pred EEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 170 IVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
+||||+ +++|.+++.+.. ...+++..+..++.||+.||+|||+++++|+||||+||+++.++
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~------------ 143 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG------------ 143 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC------------
Confidence 999999 899999997532 23478899999999999999999999999999999999998754
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEAL 317 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~p 317 (411)
.+....++|+|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..|
T Consensus 144 ----------~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 144 ----------YDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred ----------CCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 1123357788888775432211 12345678999999999899999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 318 FQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
|...+..+....+.... ........+..+.+++.+|+..+ |.+||++.++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~i~~~ 266 (269)
T cd05044 214 YPALNNQEVLQHVTAGG---RLQKPENCPDKIYQLMTNCWAQD----PSERPTFDRIQEI 266 (269)
T ss_pred CcccCHHHHHHHHhcCC---ccCCcccchHHHHHHHHHHcCCC----cccCCCHHHHHHH
Confidence 98777666555443321 11122345677889999998888 9999999998764
No 360
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-38 Score=292.47 Aligned_cols=239 Identities=22% Similarity=0.301 Sum_probs=191.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
+.||+|+||.||+|... ++..||+|+++... .....+.+|+.+++.+.|+|+ +++++++...+..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNI-----VKLIGVCTQRQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCc-----CeEEEEEecCCccEEEEECC
Confidence 36899999999999864 67889999987532 334567889999999988877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++.++
T Consensus 75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~----------------------- 130 (250)
T cd05085 75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN----------------------- 130 (250)
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC-----------------------
Confidence 999999987654 3588999999999999999999999999999999999998776
Q ss_pred CCCCCeeEeecCCcccccCCC----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLAM 329 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~~ 329 (411)
.++|+|||++....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........
T Consensus 131 ----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~ 206 (250)
T cd05085 131 ----VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ 206 (250)
T ss_pred ----eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence 45666666654332211 11234567999999998889999999999999999998 9999988766655554
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+.... ........+..+.+++.+|+..+ |+.||++.++++.
T Consensus 207 ~~~~~---~~~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~~l~~~ 247 (250)
T cd05085 207 VEKGY---RMSCPQKCPDDVYKVMQRCWDYK----PENRPKFSELQKE 247 (250)
T ss_pred HHcCC---CCCCCCCCCHHHHHHHHHHcccC----cccCCCHHHHHHH
Confidence 44321 11222345678899999999988 9999999998865
No 361
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.2e-38 Score=292.89 Aligned_cols=240 Identities=23% Similarity=0.331 Sum_probs=193.6
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
++||+|+||.||+|.+.. ++.||+|++.... .....+.+|+.+++++.|+++ +++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-----VKLIGVCVQKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----EEEEEEEecCCCeEEEEEcC
Confidence 478999999999999887 8999999987533 245678899999999988877 99999999999999999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccC
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNL 254 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~ 254 (411)
+++|.+++.... ..+++..+..++.|++.||+|||++|++||||||+|||++.++
T Consensus 75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~----------------------- 130 (251)
T cd05041 75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN----------------------- 130 (251)
T ss_pred CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC-----------------------
Confidence 899999997654 3688999999999999999999999999999999999998776
Q ss_pred CCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q 015222 255 PKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHLA 328 (411)
Q Consensus 255 ~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~~ 328 (411)
.++|+|||.+....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||..........
T Consensus 131 ----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~ 206 (251)
T cd05041 131 ----VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRE 206 (251)
T ss_pred ----cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHH
Confidence 45666666655432111 11123567999999998899999999999999999999 899998776655554
Q ss_pred HHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 329 MMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 329 ~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.+..... . ......+..+.+++.+|+..+ |.+||++.++++..
T Consensus 207 ~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~----p~~Rp~~~ell~~l 249 (251)
T cd05041 207 RIESGYR-M--PAPQLCPEEIYRLMLQCWAYD----PENRPSFSEIYNEL 249 (251)
T ss_pred HHhcCCC-C--CCCccCCHHHHHHHHHHhccC----hhhCcCHHHHHHHh
Confidence 4433211 1 112345678899999998888 99999999998753
No 362
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.6e-38 Score=297.04 Aligned_cols=248 Identities=18% Similarity=0.225 Sum_probs=197.0
Q ss_pred CCCeEEEeeeccccceEEEEEEeCC----CCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~----~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~ 164 (411)
.++|++.+.||+|+||.||+|.+.. ++..||+|++... ....+.+.+|+.+++.+.|+|+ +++++++..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~ 79 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNI-----LPILHVCIE 79 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEec
Confidence 4689999999999999999999876 3578999998743 2345667889999999988888 999987655
Q ss_pred -CCeEEEEEccC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 015222 165 -RNHICIVFEKL-GPSLYDFLRKNSY------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 165 -~~~~~lv~e~~-~~~L~~~l~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
+...++++||+ +++|.+++..... ..+++..+..++.||+.||+|||+.|++|+||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~----- 154 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEEL----- 154 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCC-----
Confidence 57889999999 8999999976431 3589999999999999999999999999999999999998766
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHH
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 311 (411)
.+||+|||+++...... ....++..|+|||++.+..++.++|||||||++||+
T Consensus 155 ----------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el 212 (280)
T cd05043 155 ----------------------QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL 212 (280)
T ss_pred ----------------------cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence 45666666655332111 112456779999999988899999999999999999
Q ss_pred Hh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
++ |+.||...+..+....+.... .. ......++.+.+++.+|+..+ |+.||++.++++.
T Consensus 213 ~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~~l~~~----p~~Rps~~~~~~~ 272 (280)
T cd05043 213 MTLGQTPYVEIDPFEMAAYLKDGY-RL--AQPINCPDELFAVMACCWALD----PEERPSFSQLVQC 272 (280)
T ss_pred hcCCCCCcCcCCHHHHHHHHHcCC-CC--CCCCcCCHHHHHHHHHHcCCC----hhhCCCHHHHHHH
Confidence 99 999998776655544443321 11 112345677889999998888 9999999998864
No 363
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-38 Score=297.70 Aligned_cols=247 Identities=24% Similarity=0.328 Sum_probs=187.6
Q ss_pred CCeEEEeeeccccceEEEEEE----eCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--
Q 015222 92 PRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-- 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~----~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-- 164 (411)
++|++++.||+|+||.||+|. +..+++.||+|.+.... ...+.+.+|+.+++++.|+|+ +++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~ 78 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI-----VKYKGVCYSAG 78 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-----eEEEEEEccCC
Confidence 479999999999999999997 45678899999987543 334677899999999988877 999887643
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
...+++||||+ +++|.+++.+.. ..+++..+..++.||+.||+|||++||+||||||+||+++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~----------- 146 (284)
T cd05081 79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENR----------- 146 (284)
T ss_pred CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCe-----------
Confidence 45789999999 999999997653 35899999999999999999999999999999999999987764
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
++|+|||++........ ...++..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 147 ----------------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~ 210 (284)
T cd05081 147 ----------------VKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDK 210 (284)
T ss_pred ----------------EEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCc
Confidence 55666665554322111 11234569999999988899999999999999999998877
Q ss_pred CCCCChHH---------------HHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 318 FQTHENLE---------------HLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 318 f~~~~~~~---------------~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+....... .+..+......++ .....+..+.+++.+|+..+ |+.|||+.++++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ei~~~ 279 (284)
T cd05081 211 SCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP--APPGCPAEIYAIMKECWNND----PSQRPSFSELALQ 279 (284)
T ss_pred CCCcchhhhhhcccccccccchHHHHHHHhcCCcCC--CCCCCCHHHHHHHHHHccCC----hhhCCCHHHHHHH
Confidence 64322110 0000111111111 11235667889999998888 9999999999864
No 364
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.4e-38 Score=293.48 Aligned_cols=243 Identities=21% Similarity=0.267 Sum_probs=192.0
Q ss_pred eeeccccceEEEEEEeCCCC----------cEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 98 SKMGEGTFGQVVECFDNEKK----------ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~----------~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+.||+|+||.||+|.+..++ ..|++|++.........+.+|+.+++.+.|+++ +++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHL-----VKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcch-----hheeeEEec-CC
Confidence 46899999999999998776 458889887554446778899999999988877 999998877 77
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
.++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.++..
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~------------- 140 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN------------- 140 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc-------------
Confidence 89999999 9999999987542 68999999999999999999999999999999999999876510
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
......++|+|||++..... .....++..|+|||++.+. .++.++|||||||++|+|++ |..||...+.
T Consensus 141 -------~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~ 212 (259)
T cd05037 141 -------EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS 212 (259)
T ss_pred -------cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc
Confidence 01223589999998876543 2234677889999999876 78999999999999999999 6888877654
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
.+...... .....+.. ....+.+++.+|+..+ |.+||++.++++.
T Consensus 213 ~~~~~~~~-~~~~~~~~----~~~~~~~li~~~l~~~----p~~Rpt~~~il~~ 257 (259)
T cd05037 213 SEKERFYQ-DQHRLPMP----DCAELANLINQCWTYD----PTKRPSFRAILRD 257 (259)
T ss_pred hhHHHHHh-cCCCCCCC----CchHHHHHHHHHhccC----hhhCCCHHHHHHh
Confidence 33333222 11112111 1257889999998888 9999999999864
No 365
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.9e-39 Score=298.57 Aligned_cols=249 Identities=21% Similarity=0.304 Sum_probs=194.0
Q ss_pred CCeEEEeeeccccceEEEEEEeC----CCCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-
Q 015222 92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY- 164 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~----~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~- 164 (411)
..|++.+.||+|+||.||+|... .+++.||||++..... ..+.+.+|+++++.+.|+++ +++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-----~~~~~~~~~~ 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-----VKYKGVCEKP 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-----heEEeeeecC
Confidence 46889999999999999999864 3478999999986544 36778999999999988877 999998877
Q ss_pred -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
+...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+|+||||+||+++.++
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~----------- 146 (284)
T cd05038 79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED----------- 146 (284)
T ss_pred CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC-----------
Confidence 56899999999 899999998754 3589999999999999999999999999999999999998766
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCCCc------ccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHS------YVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
.++|+|||.+........ ...++..|+|||.+.+..++.++|||||||++|||++|..
T Consensus 147 ----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~ 210 (284)
T cd05038 147 ----------------LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210 (284)
T ss_pred ----------------CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence 567777776665432211 1234567999999988899999999999999999999999
Q ss_pred CCCCCChHH-----------HHHHHHH-HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 317 LFQTHENLE-----------HLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 317 pf~~~~~~~-----------~~~~i~~-~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||....... ....+.. .............+..+.+++.+|+..+ |..||++.++++.
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~----p~~Rpt~~ei~~~ 279 (284)
T cd05038 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAE----PQDRPSFADLILI 279 (284)
T ss_pred CcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccC----hhhCCCHHHHHHH
Confidence 986543211 0111111 1111111112234567889999998888 8888999998864
No 366
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-39 Score=317.95 Aligned_cols=255 Identities=23% Similarity=0.396 Sum_probs=219.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-----C
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----R 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-----~ 165 (411)
.+.|+|.+.||.|.+|.||+++.+.+++.+|+|++.......++++.|.++|+.+.|+ +|++.++++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h----pnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH----PNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC----CCcceEEEEEEEecCCCC
Confidence 3579999999999999999999999999999999988888888899999999988643 556999988764 5
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
+.+||||||| ||+..|+++...+..+.|+.+..|++.++.||.+||...++|||||-.|||++.+|
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~------------- 160 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA------------- 160 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC-------------
Confidence 6899999999 99999999877778899999999999999999999999999999999999998877
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-----CCCccchhHHHHHHHHHHHhCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~elltg~~ 316 (411)
.|||+|||.+...+.+ ..+.+||+.|||||++... .|+..+|+||||++..||..|.+
T Consensus 161 --------------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 161 --------------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred --------------cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 7899999988765443 4567999999999999753 47789999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHhCCCChh-HHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 317 LFQTHENLEHLAMMERVLGPLPHH-MVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~~~~p~~-~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
|+.+......+-.|-+ .+.|.- -+..++..+.+||..||.+| ..+||+..++++|||+..
T Consensus 227 Pl~DmHPmraLF~IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd----~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 227 PLCDMHPMRALFLIPR--NPPPKLKRPKKWSKKFNDFISTCLVKD----YEQRPSTEELLKHPFITE 287 (953)
T ss_pred CccCcchhhhhccCCC--CCCccccchhhHHHHHHHHHHHHHhhc----cccCcchhhhccCCcccc
Confidence 9987666554443332 222222 25678899999999999999 999999999999999993
No 367
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=5.4e-40 Score=279.90 Aligned_cols=257 Identities=23% Similarity=0.455 Sum_probs=213.7
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--Ce
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NH 167 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~ 167 (411)
-.++|++.+++|+|.|+.||.|.+..+++.++||+++.... +.+.+|+.||+.|. +++||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk--kKIkREikIL~nL~----gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK--KKIKREIKILQNLR----GGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH--HHHHHHHHHHHhcc----CCCCeeehhhhhcCccccC
Confidence 34789999999999999999999999999999999986543 66889999999997 334559999998874 57
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..+|+||+ +.+...+.. .++...++.++.+++.||.|+|++||+|||+||.|++|+...
T Consensus 110 paLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~--------------- 169 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL--------------- 169 (338)
T ss_pred chhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh---------------
Confidence 88999999 666555433 588899999999999999999999999999999999998743
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcc--cccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCC-CCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALF-QTHE 322 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf-~~~~ 322 (411)
..++|+|+|+|.+.+..... .+.+..|.-||++..- .|+.+-|+|||||+|..|+..+.|| .|.+
T Consensus 170 -----------rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~d 238 (338)
T KOG0668|consen 170 -----------RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD 238 (338)
T ss_pred -----------ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCC
Confidence 37899999999988766543 5678889999999875 6899999999999999999987775 6778
Q ss_pred hHHHHHHHHHHhCC-------------CChhHHH--------------------hhhhhhhhhhccCCccCCCCCCCcHH
Q 015222 323 NLEHLAMMERVLGP-------------LPHHMVI--------------------RADRRAEKYFRRGARLDWPDGATSRD 369 (411)
Q Consensus 323 ~~~~~~~i~~~~~~-------------~p~~~~~--------------------~~~~~~~~li~~~l~~~~~~rp~~R~ 369 (411)
+.+++.+|.++.|. +++.+.. -.++++.+|+.++|+.| ...|+
T Consensus 239 N~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYD----HqeRl 314 (338)
T KOG0668|consen 239 NYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYD----HQERL 314 (338)
T ss_pred CHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhc----ccccc
Confidence 88888888777653 2222211 13478899999999999 99999
Q ss_pred HHHHHHhcCCCCcccccC
Q 015222 370 SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 370 t~~~il~~~~~~~~~~~~ 387 (411)
|++|++.||||..+....
T Consensus 315 TakEam~HpyF~~~~~~~ 332 (338)
T KOG0668|consen 315 TAKEAMAHPYFAPVREAE 332 (338)
T ss_pred chHHHhcCchHHHHHHHh
Confidence 999999999998765443
No 368
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.5e-38 Score=293.92 Aligned_cols=244 Identities=20% Similarity=0.272 Sum_probs=183.1
Q ss_pred eeeccccceEEEEEEeCC--CCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~--~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
++||+|+||.||+|.... ....+|+|.+.... .....+.+|+.+++.++|+|+ +++++.+.+.+..++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----i~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNV-----LQCLGQCIESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCc-----ceEEEEECCCCceEEEEE
Confidence 368999999999996533 34578999876432 334567789999999888877 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 174 KL-GPSLYDFLRKNSY---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
|+ +++|.+++..... ...++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~------------------ 137 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL------------------ 137 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC------------------
Confidence 99 8999999976532 2356788899999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecC-------CCCCccchhHHHHHHHHHHHh-CCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEA 316 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ellt-g~~ 316 (411)
.+||+|||++...... .....++..|+|||++.. ..++.++|||||||++|||++ |..
T Consensus 138 ---------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~ 208 (269)
T cd05042 138 ---------SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQ 208 (269)
T ss_pred ---------cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCC
Confidence 5667777766432211 122345678999998743 356889999999999999999 889
Q ss_pred CCCCCChHHHHHHHHHHh-CCCCh-hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 317 LFQTHENLEHLAMMERVL-GPLPH-HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~~-~~~p~-~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
||......+.+..+.... ..++. ......+....+++..|+ .+ |++||+++++++..
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d----p~~Rpt~~~v~~~l 267 (269)
T cd05042 209 PYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LD----PETRPTAEEVHELL 267 (269)
T ss_pred CCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cC----cccccCHHHHHHHh
Confidence 998777666555443322 12221 222345556666666654 24 99999999998753
No 369
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.4e-38 Score=293.09 Aligned_cols=243 Identities=19% Similarity=0.251 Sum_probs=182.1
Q ss_pred eeeccccceEEEEEEeC--CCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
+.||+|+||.||+|... .++..+|+|.++... .....+.+|+.++++++|+|+ +++++++.+....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-----LQCLGQCTEVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEcCCCCcEEEEE
Confidence 36899999999999864 355679999987543 233467889999999988877 999999998889999999
Q ss_pred cC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 174 KL-GPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
|+ +++|.+++.... ....++..+..++.|++.||+|||+.|++|+||||+||+++.++
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~------------------ 137 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL------------------ 137 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC------------------
Confidence 99 899999997542 12456778889999999999999999999999999999998766
Q ss_pred ccccCCCCCCeeEeecCCcccccCC-----CcccccCCCccccceecCC-------CCCccchhHHHHHHHHHHHh-CCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD-----HSYVVSTRHYRAPEVILGL-------GWNYPCDLWSVGCILVELCS-GEA 316 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwSlGvil~ellt-g~~ 316 (411)
.++|+|||.+...... .....|+..|+|||++.+. .++.++|||||||++|||++ |+.
T Consensus 138 ---------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~ 208 (269)
T cd05087 138 ---------TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ 208 (269)
T ss_pred ---------cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCC
Confidence 4566666655432211 1123567889999998643 35789999999999999996 999
Q ss_pred CCCCCChHHHHHHHHHH-hCCCC-hhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 317 LFQTHENLEHLAMMERV-LGPLP-HHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 317 pf~~~~~~~~~~~i~~~-~~~~p-~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
||...+..+........ ....+ .......++.+.+++..| |. +|++||++++++..
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c----~~-~P~~Rpt~~~l~~~ 266 (269)
T cd05087 209 PYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFC----WL-QPEQRPSAEEVHLL 266 (269)
T ss_pred CCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHH----hc-CcccCCCHHHHHHH
Confidence 99876665544332221 11121 111223445566777766 42 39999999999864
No 370
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=313.96 Aligned_cols=202 Identities=29% Similarity=0.415 Sum_probs=175.9
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC----
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---- 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---- 165 (411)
.-|...+.||+|+||.||+++++.+|+.||||.++.. ....+...+|+++|++++|+|| |+++++-+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NI-----Vk~f~iee~~~~~~ 87 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNI-----VKLFDIEETKFLGL 87 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhh-----hhhcccCCccccCc
Confidence 3467778999999999999999999999999999853 3556778899999999999888 9998876653
Q ss_pred --CeEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 166 --NHICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 166 --~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
....+||||| ||+|...|.+-. ...|++.++..++.++..||.|||++|||||||||+||++-..+
T Consensus 88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge---------- 157 (732)
T KOG4250|consen 88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE---------- 157 (732)
T ss_pred ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC----------
Confidence 3678999999 999999998532 24699999999999999999999999999999999999985532
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCCC--cccccCCCccccceecC-CCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH--SYVVSTRHYRAPEVILG-LGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
++....||+|||.|+..+++. ...+||..|.+||++.. +.|+..+|.|||||++|+..||..||
T Consensus 158 -------------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF 224 (732)
T KOG4250|consen 158 -------------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPF 224 (732)
T ss_pred -------------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCC
Confidence 345578999999999876654 55799999999999995 78999999999999999999999999
Q ss_pred CCC
Q 015222 319 QTH 321 (411)
Q Consensus 319 ~~~ 321 (411)
...
T Consensus 225 ~p~ 227 (732)
T KOG4250|consen 225 IPF 227 (732)
T ss_pred CcC
Confidence 654
No 371
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=3.7e-38 Score=298.14 Aligned_cols=246 Identities=22% Similarity=0.280 Sum_probs=192.2
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCc----EEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~----~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
++|++.+.||+|+||.||+|.+..+++ .||+|.+.... .....+.+|+.+++.+.|+|+ +++++++..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~- 80 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL-----VRLLGVCLS- 80 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEcC-
Confidence 578999999999999999999887775 57889886432 223457789999999988887 999998865
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
...++++||+ +|+|.+++.... ..+++..+..++.|++.||+|||++||+|+||||+||+++.++
T Consensus 81 ~~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~------------- 146 (303)
T cd05110 81 PTIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN------------- 146 (303)
T ss_pred CCceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC-------------
Confidence 4567999999 899999987654 3589999999999999999999999999999999999997665
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
.+||+|||++....... ....++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 147 --------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 147 --------------HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred --------------ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 46777777665433221 11235678999999998899999999999999999998 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
.+....+....+... ..++. ....+..+.+++.+|+..+ |+.||++.++++..
T Consensus 213 ~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~li~~c~~~~----p~~Rp~~~~l~~~l 265 (303)
T cd05110 213 DGIPTREIPDLLEKG-ERLPQ--PPICTIDVYMVMVKCWMID----ADSRPKFKELAAEF 265 (303)
T ss_pred CCCCHHHHHHHHHCC-CCCCC--CCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHHH
Confidence 876654444433322 22221 1234566788888888777 88888888877654
No 372
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.6e-38 Score=291.49 Aligned_cols=248 Identities=22% Similarity=0.389 Sum_probs=196.2
Q ss_pred CeEEEeeeccccceEEEEEEeCC-CCcEEEEEEeccch-----------hhhHHHHHHHHHHHH-HhcCCCCCcceEEEe
Q 015222 93 RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN-----------KYREAAMIEIDVLQR-LARHDIGGTRCVQIR 159 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~-l~~~~i~~~~iv~~~ 159 (411)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+.... .....+..|+.++.+ +.|+|+ ++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNI-----VRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCe-----eeEE
Confidence 38889999999999999999987 67899999885321 122345567776664 555555 9999
Q ss_pred eeeecCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCccccc
Q 015222 160 NWFDYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKV 235 (411)
Q Consensus 160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l 235 (411)
+++..++..++||||+ +++|.+++... ....+++..++.++.|++.||.|||+ .|++|+||||+||+++.++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~---- 151 (269)
T cd08528 76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD---- 151 (269)
T ss_pred eeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC----
Confidence 9999999999999999 88999988542 23468999999999999999999996 7899999999999997766
Q ss_pred CCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh
Q 015222 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS 313 (411)
Q Consensus 236 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt 313 (411)
.++|+|||.+...... .....|+..|+|||.+.+..++.++||||||+++|+|++
T Consensus 152 -----------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~ 208 (269)
T cd08528 152 -----------------------KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT 208 (269)
T ss_pred -----------------------cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh
Confidence 5677777776654332 233568889999999998889999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 314 GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
|+.||...+.......+......... ....+..+.+++.+|+..| |+.||++.++..+.
T Consensus 209 g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~~----p~~Rp~~~e~~~~~ 267 (269)
T cd08528 209 LQPPFYSTNMLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPD----AEARPDIIQVSAMI 267 (269)
T ss_pred CCCcccccCHHHHHHHHhhccCCcCC--cccCCHHHHHHHHHHCCCC----CccCCCHHHHHHHh
Confidence 99999877666555554443222111 1245678899999998888 99999999988653
No 373
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.4e-38 Score=290.36 Aligned_cols=240 Identities=16% Similarity=0.211 Sum_probs=184.2
Q ss_pred eeeccccceEEEEEEeCC---CCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee-cCCeEEEE
Q 015222 98 SKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YRNHICIV 171 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~-~~~~~~lv 171 (411)
+.||+|+||.||+|.+.. .+..||+|.+... ....+.+.+|+.+++.+.|+|+ +++++++. .++..++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNV-----LSLLGICLPSEGSPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCc-----ceEEEEeecCCCCcEEE
Confidence 468999999999998653 3457999998542 2345667789999999888877 99998654 45678999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||+ +++|.+++.+.. ..+++..+..++.||+.||.|||+.||+||||||+|||+++++
T Consensus 76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~------------------- 135 (262)
T cd05058 76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF------------------- 135 (262)
T ss_pred EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC-------------------
Confidence 9999 899999997654 3467888899999999999999999999999999999998776
Q ss_pred cccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE 322 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~ 322 (411)
.+||+|||++...... .....++..|+|||.+.+..++.++|||||||++|||++ |.+||...+
T Consensus 136 --------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~ 207 (262)
T cd05058 136 --------TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD 207 (262)
T ss_pred --------cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 4566666655432211 112345678999999988899999999999999999999 577787766
Q ss_pred hHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 323 NLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
..+....+....... .....+..+.+++.+|+..+ |++||++.++++.
T Consensus 208 ~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~----p~~Rp~~~~il~~ 255 (262)
T cd05058 208 SFDITVYLLQGRRLL---QPEYCPDPLYEVMLSCWHPK----PEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHhcCCCCC---CCCcCCHHHHHHHHHHcCCC----hhhCCCHHHHHHH
Confidence 555444443321111 11234567889999998888 9999999998864
No 374
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=301.96 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=204.8
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
-.++..+.++||+|.||.|.+|+- ..+..||||+++... ..+.++.+|+++|.+|+|||| +.+++++..++.
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNI-----veLvGVC~~DeP 609 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNI-----VELLGVCVQDDP 609 (807)
T ss_pred chhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCe-----eEEEeeeecCCc
Confidence 346788999999999999999974 446899999998543 445789999999999999988 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+|+||||+ .|+|.+|+.++....+......+|+.||+.|++||.+.++|||||.+.|+|++.++
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--------------- 674 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--------------- 674 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc---------------
Confidence 99999999 99999999988644455667778999999999999999999999999999986554
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcc-----cccCCCccccceecCCCCCccchhHHHHHHHHHHHh--CCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS--GEALFQ 319 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt--g~~pf~ 319 (411)
++||+|||+++........ .+-...|||+|.+..+++++++|+|+||+++||+++ ...||.
T Consensus 675 ------------~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~ 742 (807)
T KOG1094|consen 675 ------------TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYS 742 (807)
T ss_pred ------------cEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchh
Confidence 7899999998855443322 234689999999999999999999999999999876 789999
Q ss_pred CCChHHHHHHHHHHhCCCChhH----HHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 320 THENLEHLAMMERVLGPLPHHM----VIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~----~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
..++.+..+........-+... ..-++..+-+++.+| |.-+-.+||+++++..++
T Consensus 743 ~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~C----w~~es~~RPsFe~lh~~l 801 (807)
T KOG1094|consen 743 QLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRC----WRRESEQRPSFEQLHLFL 801 (807)
T ss_pred hhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHH----hchhhhcCCCHHHHHHHH
Confidence 9888888777666554322221 122344455566555 555599999999987653
No 375
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=326.87 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=202.2
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCC-----cEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~-----~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
...-+..+.||+|.||.||.|...... ..||||.+++. .....+|.+|..+++.++|+|| +++++++-
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNi-----v~liGv~l 765 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNI-----VSLIGVCL 765 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcce-----eeEEEeec
Confidence 356788899999999999999876433 34999999865 4566788999999999999988 99999999
Q ss_pred cCCeEEEEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCC
Q 015222 164 YRNHICIVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237 (411)
Q Consensus 164 ~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~d 237 (411)
+....+|++||| ||+|..||++.. ...++..+...++.||++|++||+++++|||||-.+|+|++...
T Consensus 766 ~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r------ 839 (1025)
T KOG1095|consen 766 DSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR------ 839 (1025)
T ss_pred CCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC------
Confidence 999999999999 999999999762 24689999999999999999999999999999999999987654
Q ss_pred cccccccCCCCCccccCCCCCCeeEeecCCcccccCCCccc-----ccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYV-----VSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 238 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~-----~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
.+||+|||+|+.......+. .-...|||||.+..+.++.++|||||||+|||++
T Consensus 840 ---------------------~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif 898 (1025)
T KOG1095|consen 840 ---------------------VVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF 898 (1025)
T ss_pred ---------------------cEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence 78888888888443332221 1235799999999999999999999999999999
Q ss_pred h-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 313 S-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 313 t-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
| |..||.+.++.+.+....+.- .++. ...+++.+- +.|..||...|+.||++..+++
T Consensus 899 slG~~PY~~~~n~~v~~~~~~gg-RL~~--P~~CP~~ly----~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 899 SLGATPYPSRSNFEVLLDVLEGG-RLDP--PSYCPEKLY----QLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred hCCCCCCCCcchHHHHHHHHhCC-ccCC--CCCCChHHH----HHHHHHccCChhhCccHHHHHh
Confidence 9 999999999988887655532 2221 122333344 4555668888999999999998
No 376
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-37 Score=289.09 Aligned_cols=244 Identities=20% Similarity=0.248 Sum_probs=183.7
Q ss_pred eeeccccceEEEEEEeCCC--CcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 98 SKMGEGTFGQVVECFDNEK--KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~--~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
++||+|+||.||+|..... ...+++|.++... ...+.+.+|+.+++.++|+|+ +++++.+......|+|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNI-----LQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcch-----hheEEEecCCCccEEEEe
Confidence 3689999999999975433 3456777766432 345678889999999988877 999999999899999999
Q ss_pred cC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 174 KL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|+ +++|.+++.+.. ...+++..+..++.||+.||+|||+.+|+||||||+|||++.++
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~------------------- 136 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL------------------- 136 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc-------------------
Confidence 99 899999997642 23467778899999999999999999999999999999997766
Q ss_pred cccCCCCCCeeEeecCCcccccC-----CCcccccCCCccccceecC-------CCCCccchhHHHHHHHHHHHh-CCCC
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILG-------LGWNYPCDLWSVGCILVELCS-GEAL 317 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwSlGvil~ellt-g~~p 317 (411)
.++|+|||++..... ......|+..|+|||++.. ..++.++|||||||++|||++ |..|
T Consensus 137 --------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p 208 (268)
T cd05086 137 --------TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQP 208 (268)
T ss_pred --------cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCC
Confidence 466677776543211 1123467889999999853 245789999999999999997 6889
Q ss_pred CCCCChHHHHHHHHHHhC-C-CChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 318 FQTHENLEHLAMMERVLG-P-LPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 318 f~~~~~~~~~~~i~~~~~-~-~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
|...+..+.+..+..... . +.+.+....++.+.+++..|+ .+ |.+||+++++++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~----P~~Rp~~~~i~~~l 266 (268)
T cd05086 209 YSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LS----PEKRATAEEVHRLL 266 (268)
T ss_pred CCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hC----cccCCCHHHHHHHh
Confidence 987777666655433321 1 122222335566677777664 33 99999999998654
No 377
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.1e-39 Score=326.45 Aligned_cols=274 Identities=25% Similarity=0.316 Sum_probs=197.5
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeee---
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--- 163 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~--- 163 (411)
....+|+.++.||+||||.||+++++-+|+.||||.+... ......+.+|+..|.+|+|+|+ |+++..+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNV-----VRYysAWVEs~ 550 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNV-----VRYYSAWVEST 550 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcce-----eeeehhhhccC
Confidence 3456788999999999999999999999999999999754 4455667899999999999998 22221000
Q ss_pred --------------------------------------------------------------------------------
Q 015222 164 -------------------------------------------------------------------------------- 163 (411)
Q Consensus 164 -------------------------------------------------------------------------------- 163 (411)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred ----------------------------cC--------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 015222 164 ----------------------------YR--------NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206 (411)
Q Consensus 164 ----------------------------~~--------~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~a 206 (411)
.+ -.+||-|||| ...|.+++.++... -....+++++++|+.|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEG 709 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEG 709 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHH
Confidence 00 2479999999 55556666665411 1478899999999999
Q ss_pred HHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccc-cCCCcccccCCCcc
Q 015222 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE-HQDHSYVVSTRHYR 285 (411)
Q Consensus 207 L~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~ 285 (411)
|.|+|++|||||||||.||++++++.+||+|||++....... ........+.+.-.-. ....+..+||..|+
T Consensus 710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~-------~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENL-------ESIDQDLSFSTNRAGSNDGDLTSQVGTALYV 782 (1351)
T ss_pred HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhh-------hhHhhccCccccccCCCCcccccccceeeee
Confidence 999999999999999999999999888888887765421100 0001111111111111 11335578999999
Q ss_pred ccceecCCC---CCccchhHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCC
Q 015222 286 APEVILGLG---WNYPCDLWSVGCILVELCSGEALFQTH-ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDW 361 (411)
Q Consensus 286 aPE~~~~~~---~~~~~DiwSlGvil~elltg~~pf~~~-~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~ 361 (411)
|||++.+.. |+.|+||||||||||||+. ||... +....+..+.++..+.+..+...--..-..+|+.||+.|
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hd- 858 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHD- 858 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCC-
Confidence 999998764 9999999999999999984 67542 223344444433334443333334455678999999999
Q ss_pred CCCCCcHHHHHHHHhcCCCCc
Q 015222 362 PDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 362 ~~rp~~R~t~~~il~~~~~~~ 382 (411)
|++|||+.|+|++-|++-
T Consensus 859 ---P~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 859 ---PSKRPTATELLNSELLPP 876 (1351)
T ss_pred ---CccCCCHHHHhhccCCCc
Confidence 999999999999999984
No 378
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=298.41 Aligned_cols=261 Identities=26% Similarity=0.395 Sum_probs=209.9
Q ss_pred eeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--------hhhHHHHHHHHHHHHHhcCCCCCcceE
Q 015222 85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------KYREAAMIEIDVLQRLARHDIGGTRCV 156 (411)
Q Consensus 85 ~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------~~~~~~~~E~~~l~~l~~~~i~~~~iv 156 (411)
.-...++++|-++..||+|||+.||+|.|....+.||||+-.... ...+...+|..|.+.|.|+.| |
T Consensus 456 kDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRI-----V 530 (775)
T KOG1151|consen 456 KDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRI-----V 530 (775)
T ss_pred ccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCccee-----e
Confidence 344567789999999999999999999999999999999975332 233456778888888877766 9
Q ss_pred EEeeeeec-CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCcEEEecCcc
Q 015222 157 QIRNWFDY-RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEY 232 (411)
Q Consensus 157 ~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--givH~Dikp~NIli~~~~~ 232 (411)
++|++|.- .+.+|-|+||| |.+|.-||+.+. .+++.+++.|+.||+.||.||.+. .|||-||||.|||+.+..
T Consensus 531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt- 607 (775)
T KOG1151|consen 531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT- 607 (775)
T ss_pred eeeeeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc-
Confidence 99999975 56899999999 889988888776 799999999999999999999987 499999999999997643
Q ss_pred cccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC----------cccccCCCccccceecCC----CCCcc
Q 015222 233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGL----GWNYP 298 (411)
Q Consensus 233 ~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~----~~~~~ 298 (411)
..+.+||+|||++.+.+... +...||.+|++||.+.-+ ..+.+
T Consensus 608 -----------------------acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnK 664 (775)
T KOG1151|consen 608 -----------------------ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNK 664 (775)
T ss_pred -----------------------ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccc
Confidence 33468888888887755432 235799999999988644 47899
Q ss_pred chhHHHHHHHHHHHhCCCCCCCCChHH-HHHH--H-HHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHH
Q 015222 299 CDLWSVGCILVELCSGEALFQTHENLE-HLAM--M-ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAV 374 (411)
Q Consensus 299 ~DiwSlGvil~elltg~~pf~~~~~~~-~~~~--i-~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~i 374 (411)
+||||+|||+|..+.|+.||...-... ++.. | ......||.. +.++.++++||++||++. -..|....++
T Consensus 665 VDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYR----KeDR~DV~qL 738 (775)
T KOG1151|consen 665 VDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYR----KEDRIDVQQL 738 (775)
T ss_pred eeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC--CccCHHHHHHHHHHHHhh----hhhhhhHHHH
Confidence 999999999999999999997643332 2221 1 1122345543 457889999999999998 8899999999
Q ss_pred HhcCCCCc
Q 015222 375 WKLLRLPV 382 (411)
Q Consensus 375 l~~~~~~~ 382 (411)
-.+|+|.-
T Consensus 739 A~dpyllP 746 (775)
T KOG1151|consen 739 ACDPYLLP 746 (775)
T ss_pred ccCccccc
Confidence 99998764
No 379
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-37 Score=289.29 Aligned_cols=245 Identities=15% Similarity=0.204 Sum_probs=191.0
Q ss_pred eEEEeeeccccceEEEEEEeCC---CCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC-
Q 015222 94 YRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN- 166 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~- 166 (411)
|++.+.||+|+||.||+|.+.. +++.||||++... ....+.+.+|+.+++++.|+++ +++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~ 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNV-----IKLIGVSLRSRA 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccCCC
Confidence 6778899999999999998653 5789999998743 2345567889999999988877 99999875432
Q ss_pred -----eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 015222 167 -----HICIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 167 -----~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
..++++||+ +++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+||+++.++
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~----- 150 (273)
T cd05074 76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENM----- 150 (273)
T ss_pred CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCC-----
Confidence 357899999 899998875321 12578999999999999999999999999999999999997665
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCCCCCccchhHHHHHHHHHH
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVEL 311 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 311 (411)
.++|+|||.+....... ....++..|++||.+.+..++.++|||||||++|+|
T Consensus 151 ----------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el 208 (273)
T cd05074 151 ----------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEI 208 (273)
T ss_pred ----------------------CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHH
Confidence 56677777665432211 123456789999999988899999999999999999
Q ss_pred Hh-CCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 312 CS-GEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 312 lt-g~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
++ |+.||.+.+..+....+..... . ......+..+.+++.+|+..+ |+.||++.++++.
T Consensus 209 ~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~l~~~----p~~Rps~~~~~~~ 268 (273)
T cd05074 209 MTRGQTPYAGVENSEIYNYLIKGNR-L--KQPPDCLEDVYELMCQCWSPE----PKCRPSFQHLRDQ 268 (273)
T ss_pred hhCCCCCCCCCCHHHHHHHHHcCCc-C--CCCCCCCHHHHHHHHHHcCCC----hhhCcCHHHHHHH
Confidence 99 9999987766555444433211 1 111245577899999998888 9999999999875
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.5e-37 Score=313.34 Aligned_cols=256 Identities=18% Similarity=0.230 Sum_probs=174.1
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCC----CcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeee-----
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW----- 161 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~----~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~----- 161 (411)
.++|++.++||+|+||.||+|++..+ +..||||.+...... |..+..++.+... .++..+...
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~------e~~~~e~l~~~~~--~~~~~~~~~~~~~~ 202 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV------EIWMNERVRRACP--NSCADFVYGFLEPV 202 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh------HHHHHHHHHhhch--hhHHHHHHhhhccc
Confidence 46899999999999999999999988 899999987643221 2222222222110 000111111
Q ss_pred -eecCCeEEEEEccC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 015222 162 -FDYRNHICIVFEKL-GPSLYDFLRKNSYR------------------SFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221 (411)
Q Consensus 162 -~~~~~~~~lv~e~~-~~~L~~~l~~~~~~------------------~l~~~~~~~i~~qi~~aL~~LH~~givH~Dik 221 (411)
...+...++||||+ +++|.+++...... ......+..++.||+.||+|||++||+|||||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 23456899999999 88999998754311 11234567899999999999999999999999
Q ss_pred CCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC----CcccccCCCccccceecCC----
Q 015222 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD----HSYVVSTRHYRAPEVILGL---- 293 (411)
Q Consensus 222 p~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~---- 293 (411)
|+|||++.+ +..+||+|||+|...... .....+|+.|+|||++...
T Consensus 283 P~NILl~~~--------------------------~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~ 336 (566)
T PLN03225 283 PQNIIFSEG--------------------------SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTP 336 (566)
T ss_pred HHHEEEeCC--------------------------CCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCC
Confidence 999999752 126788888888654322 2346789999999976432
Q ss_pred ------------------CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC------------CChhHH-
Q 015222 294 ------------------GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGP------------LPHHMV- 342 (411)
Q Consensus 294 ------------------~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~------------~p~~~~- 342 (411)
.++.++|||||||+||||+++..++.. ....+.......+. ......
T Consensus 337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 414 (566)
T PLN03225 337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRR 414 (566)
T ss_pred CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhh
Confidence 234567999999999999997766532 22222211111111 000000
Q ss_pred -----HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 343 -----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 343 -----~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
........+||.+||..| |.+|||+.++++||||.+....
T Consensus 415 ~~~~~d~~~~~~~dLi~~mL~~d----P~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 415 GFEVLDLDGGAGWELLKSMMRFK----GRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred hhhhccccchHHHHHHHHHccCC----cccCCCHHHHhCCcCcCCCCcc
Confidence 001123448999999999 9999999999999999986654
No 381
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=283.11 Aligned_cols=252 Identities=25% Similarity=0.399 Sum_probs=208.8
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-----Ce
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-----NH 167 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-----~~ 167 (411)
-.+.||.|+||.||.++|..+|+.||+|.+... -...+.+.+|+..|...+|.|+ ...+++..-. ..
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNV-----LSaLDILQPph~dfFqE 131 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV-----LSLLDILQPANPSFFQE 131 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccH-----HHHHHhcCCCCchHHHH
Confidence 346899999999999999999999999988532 2345678889999999999887 6666554322 35
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+|+++|++..+|...+-.-. .++.+.++-++.||++||+|||+.||.||||||.|+|++++
T Consensus 132 iYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSN----------------- 192 (449)
T KOG0664|consen 132 LYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSN----------------- 192 (449)
T ss_pred HHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccC-----------------
Confidence 78999999889988877654 79999999999999999999999999999999999998764
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCC----cccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
..+||||||+++..+.+. +..+-|-+|+|||++.|. .|+.++||||.|||+.||+..+..|...+
T Consensus 193 ----------CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 193 ----------CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred ----------ceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 478999999998765443 335678899999999987 79999999999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCChhHHHh------------------------------hhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 323 NLEHLAMMERVLGPLPHHMVIR------------------------------ADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~~~~~~------------------------------~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
..+.++.|....+....+-... -..+...++.+++..+ |.+|.+..
T Consensus 263 PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d----~dkris~~ 338 (449)
T KOG0664|consen 263 PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFD----PDKRISVE 338 (449)
T ss_pred hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCC----CcccccHh
Confidence 9999999988887655432221 1234567788888888 99999999
Q ss_pred HHHhcCCCCcccc
Q 015222 373 AVWKLLRLPVIDL 385 (411)
Q Consensus 373 ~il~~~~~~~~~~ 385 (411)
+.+.|+++.....
T Consensus 339 ~A~~~~~~~e~R~ 351 (449)
T KOG0664|consen 339 EALQHRYLEEGRL 351 (449)
T ss_pred hhcccccccccce
Confidence 9999999887654
No 382
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=5.9e-37 Score=303.58 Aligned_cols=264 Identities=20% Similarity=0.287 Sum_probs=191.3
Q ss_pred CCCeEEEeeeccccceEEEEEEeC----------------CCCcEEEEEEeccchh---------------hhHHHHHHH
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDN----------------EKKELVAIKIVRSINK---------------YREAAMIEI 139 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~----------------~~~~~vavK~~~~~~~---------------~~~~~~~E~ 139 (411)
.++|++.++||+|+||+||+|.+. ..++.||||.+..... ..+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 568999999999999999999752 2346799999864321 112334578
Q ss_pred HHHHHHhcCCCCCcceEEEeeeeec--------CCeEEEEEccC-CCCHHHHHHhcC----------------------C
Q 015222 140 DVLQRLARHDIGGTRCVQIRNWFDY--------RNHICIVFEKL-GPSLYDFLRKNS----------------------Y 188 (411)
Q Consensus 140 ~~l~~l~~~~i~~~~iv~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~----------------------~ 188 (411)
.++.++.|+++.+.+++++++++.. .+..++||||+ +++|.+++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 8888898888878888888887753 35689999999 999999987431 0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCc
Q 015222 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268 (411)
Q Consensus 189 ~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a 268 (411)
..+++..++.++.|++.||.|||+.+|+||||||+|||++.++ .++|+|||++
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~---------------------------~~kL~DFGla 356 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG---------------------------QVKIIDFGAA 356 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC---------------------------cEEEEeCcCc
Confidence 1245678899999999999999999999999999999997665 5677777776
Q ss_pred ccccCCC----cccccCCCccccceecCCC--------------------CC--ccchhHHHHHHHHHHHhCCC-CCCCC
Q 015222 269 TFEHQDH----SYVVSTRHYRAPEVILGLG--------------------WN--YPCDLWSVGCILVELCSGEA-LFQTH 321 (411)
Q Consensus 269 ~~~~~~~----~~~~gt~~y~aPE~~~~~~--------------------~~--~~~DiwSlGvil~elltg~~-pf~~~ 321 (411)
....... ....+|+.|+|||++.... ++ .+.||||+||++|+|++|.. ||.+.
T Consensus 357 ~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~ 436 (507)
T PLN03224 357 VDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI 436 (507)
T ss_pred cccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence 5432211 1124478999999986432 11 34799999999999999875 77542
Q ss_pred ChHH--------HHHHHHHH-hCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 322 ENLE--------HLAMMERV-LGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 322 ~~~~--------~~~~i~~~-~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.... .+...... ............++...+++.++|..++.. +.+|+|+.|+|+||||..
T Consensus 437 ~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~-~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 437 RLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQA-NRGRLSVGQALSHRFFLP 505 (507)
T ss_pred hhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCC-cccCCCHHHHhCCCCcCC
Confidence 2111 01111111 112222234556788999999999987333 478999999999999964
No 383
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-38 Score=278.32 Aligned_cols=250 Identities=28% Similarity=0.445 Sum_probs=214.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-- 165 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-- 165 (411)
..||.-++.+|.|.- .|-.|.|.-+++.||+|.+... ....+...+|...+..++|+|+ ++++.+|.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~ni-----i~l~n~ftP~~~ 89 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNI-----ISLLNVFTPQKT 89 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccce-----eeeeeccCcccc
Confidence 468999999999998 7888999999999999987532 2345667889999999999888 9999998643
Q ss_pred ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 166 ----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 166 ----~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
..+|+|||++..+|.+.+.- .++-+.+..|+.|++.|++|||+.||+||||||+||++..++
T Consensus 90 l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~---------- 155 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC---------- 155 (369)
T ss_pred HHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh----------
Confidence 36899999999999999883 477889999999999999999999999999999999997766
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
.+||.|||+|+..... .+.++.|..|.|||++.+..+...+||||+||++.||++|+..|.
T Consensus 156 -----------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 156 -----------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred -----------------heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 6788888888765544 355788999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhCCCChhHHHhh--------------------------------------hhhhhhhhccCCccCC
Q 015222 320 THENLEHLAMMERVLGPLPHHMVIRA--------------------------------------DRRAEKYFRRGARLDW 361 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~~~p~~~~~~~--------------------------------------~~~~~~li~~~l~~~~ 361 (411)
|.+..++..++.+..+...+++..+. ...+++++.+||..+
T Consensus 219 g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~- 297 (369)
T KOG0665|consen 219 GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID- 297 (369)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC-
Confidence 99988888888877776655543321 245889999999999
Q ss_pred CCCCCcHHHHHHHHhcCCCC
Q 015222 362 PDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 362 ~~rp~~R~t~~~il~~~~~~ 381 (411)
|+.|.+++++|+||+++
T Consensus 298 ---pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 298 ---PEKRISVDDALRHPYIK 314 (369)
T ss_pred ---hhhcccHHHHhcCCeee
Confidence 99999999999999986
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=279.86 Aligned_cols=258 Identities=22% Similarity=0.344 Sum_probs=203.4
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+..+-+..||.|+||+|++-.++.+|+..|||.++... +...++..|.+...+-. + .++||++++..-.++..|
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~--~--cp~IVkfyGa~F~EGdcW 139 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS--N--CPNIVKFYGALFSEGDCW 139 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc--C--CcHHHHHhhhhhcCCcee
Confidence 34566789999999999999999999999999998543 45566677777655432 2 266699999988889999
Q ss_pred EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 170 IVFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 170 lv~e~~~~~L~~~l~---~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
+.||+|..||..+.. ......++|..+-.|+...+.||.||-+ ..||||||||+|||++..|
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-------------- 205 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-------------- 205 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--------------
Confidence 999999888766543 2223479999999999999999999996 4899999999999998877
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCC--CCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGL--GWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
.+||||||.+...... .+.-.|-..|||||.+... .|+.+||+||||++|||+.||+.||.+.
T Consensus 206 -------------~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w 272 (361)
T KOG1006|consen 206 -------------DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW 272 (361)
T ss_pred -------------CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH
Confidence 7888999987654322 2334788899999999754 5899999999999999999999999876
Q ss_pred ChHHHHHHHHHHhCCCChhHH-----HhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccccc
Q 015222 322 ENLEHLAMMERVLGPLPHHMV-----IRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLY 386 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~-----~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~ 386 (411)
+. .++.+..+...-|+.+. -..+..+..||..||.+| -+.||...++++++|...-...
T Consensus 273 ~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd----~~~Rpky~~Lk~~~fyr~y~~~ 336 (361)
T KOG1006|consen 273 DS--VFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKD----RSDRPKYDDLKKFPFYRMYAVE 336 (361)
T ss_pred HH--HHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcc----cccCcchhhhhcCchhhhhhhc
Confidence 54 44444443322222111 235678899999999999 8899999999999998865443
No 385
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=254.25 Aligned_cols=210 Identities=21% Similarity=0.404 Sum_probs=170.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
+....+..||+|++|.|-+.++..+|...|+|.++.. ........+|+.+..+. ...|..|.+++.+.....++
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~----~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT----VDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC----CCCCeEEEeehhhhccccEE
Confidence 3456678999999999999999999999999998743 34445555666665443 34466799999988899999
Q ss_pred EEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~--~~~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+.||.|..||..+..+ ..+..++|..+-+|+..++.||.|||++ .|||||+||+||||+.+|
T Consensus 122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--------------- 186 (282)
T KOG0984|consen 122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--------------- 186 (282)
T ss_pred EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC---------------
Confidence 9999999899877653 1235799999999999999999999986 899999999999998887
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCC-cc-cccCCCccccceecCC----CCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDH-SY-VVSTRHYRAPEVILGL----GWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~-~~gt~~y~aPE~~~~~----~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
++|+||||.+.+..... .+ ..|...|||||.+..+ .|+-+|||||||++++||.+++.||..
T Consensus 187 ------------qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 187 ------------QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred ------------cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 78999999887754432 22 4688899999998643 689999999999999999999999975
Q ss_pred C-ChHHHHHHHHH
Q 015222 321 H-ENLEHLAMMER 332 (411)
Q Consensus 321 ~-~~~~~~~~i~~ 332 (411)
. +..+++..+.+
T Consensus 255 w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 255 WGTPFQQLKQVVE 267 (282)
T ss_pred cCCHHHHHHHHhc
Confidence 4 55666665554
No 386
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=288.69 Aligned_cols=244 Identities=19% Similarity=0.299 Sum_probs=207.9
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEc
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e 173 (411)
.....+||-|.||.||.|.++...-.||||.++.+....++|..|+.+++.++|+|+ |+++++|..+..+|||+|
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNL-----VqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccH-----HHHhhhhccCCCeEEEEe
Confidence 445679999999999999999999999999999888888999999999999999988 999999999999999999
Q ss_pred cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccc
Q 015222 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFK 252 (411)
Q Consensus 174 ~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~ 252 (411)
|| .|+|.+||++.....++.-....++.||..|++||..+++|||||-..|+|++.+.
T Consensus 344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--------------------- 402 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--------------------- 402 (1157)
T ss_pred cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc---------------------
Confidence 99 99999999987766788888999999999999999999999999999999987655
Q ss_pred cCCCCCCeeEeecCCcccccCCCcc-ccc---CCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCChHHHH
Q 015222 253 NLPKSSAIKLIDFGSTTFEHQDHSY-VVS---TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHENLEHL 327 (411)
Q Consensus 253 ~~~~~~~~kl~Dfg~a~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~~~~~ 327 (411)
.||++|||+++....+..+ -.| .+.|.|||-+..+.++.++|||+|||+|||+.| |-.||.+.+..+.+
T Consensus 403 ------iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY 476 (1157)
T KOG4278|consen 403 ------IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY 476 (1157)
T ss_pred ------eEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHH
Confidence 6788888888876655433 223 568999999999999999999999999999999 99999999888877
Q ss_pred HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 328 AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 328 ~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
..+++...-- -...+++.+-++++.| |+-.|+.||++.++.+
T Consensus 477 ~LLEkgyRM~---~PeGCPpkVYeLMraC----W~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 477 GLLEKGYRMD---GPEGCPPKVYELMRAC----WNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHHhcccccc---CCCCCCHHHHHHHHHH----hcCCcccCccHHHHHH
Confidence 7776543211 1123445555666555 6666999999998864
No 387
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.2e-35 Score=268.38 Aligned_cols=238 Identities=32% Similarity=0.502 Sum_probs=194.9
Q ss_pred cceEEEEEEeCCCCcEEEEEEeccchhh--hHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCHH
Q 015222 104 TFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180 (411)
Q Consensus 104 ~~g~V~~a~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~ 180 (411)
+||.||+|.+..+++.||+|++...... .+.+.+|+..+++++|+++ +++++++......+++||++ +++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNI-----VRLYDVFEDEDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcH-----HHHHhheeeCCEEEEEEeCCCCCCHH
Confidence 5899999999999999999999754322 5778899999999988777 99999998889999999999 66999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCe
Q 015222 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAI 260 (411)
Q Consensus 181 ~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~ 260 (411)
+++.... .+++..+..++.+++.+|.+||+.|++|+||+|+||+++.++ .+
T Consensus 76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~---------------------------~~ 126 (244)
T smart00220 76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDG---------------------------HV 126 (244)
T ss_pred HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCC---------------------------cE
Confidence 9998765 389999999999999999999999999999999999997765 56
Q ss_pred eEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCC-CChHHHHHHHHHHhCCC
Q 015222 261 KLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT-HENLEHLAMMERVLGPL 337 (411)
Q Consensus 261 kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~-~~~~~~~~~i~~~~~~~ 337 (411)
+|+|||.+...... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.. .+.......+.......
T Consensus 127 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~ 206 (244)
T smart00220 127 KLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 206 (244)
T ss_pred EEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC
Confidence 77777777655442 3345678899999999888899999999999999999999999987 33333333333322222
Q ss_pred ChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 338 PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 338 p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
.. .....+..+.+++.+|+..+ |.+||++.++++|+||
T Consensus 207 ~~-~~~~~~~~~~~~i~~~l~~~----p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 207 PP-PEWKISPEAKDLIRKLLVKD----PEKRLTAEEALQHPFF 244 (244)
T ss_pred cc-ccccCCHHHHHHHHHHccCC----chhccCHHHHhhCCCC
Confidence 11 11115677889999998888 9999999999999997
No 388
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=294.06 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=204.0
Q ss_pred CeEEEeeeccccceEEEEEEeCCCC---cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~---~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
+.++.++||+|.||+|++|.+...+ ..||||.++... ....+|.+|+.+|.+|.|+++ +++|++..+ ..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl-----iRLyGvVl~-qp 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL-----IRLYGVVLD-QP 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce-----eEEeeeecc-ch
Confidence 4566789999999999999987643 468999998544 356889999999999999887 999999987 77
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+.+|||++ .|+|.+.|++.....|-......++.||+.|+.||.++++|||||-..|||+....
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--------------- 249 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--------------- 249 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc---------------
Confidence 88999999 99999999985556788899999999999999999999999999999999987644
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccc------cCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV------STRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQ 319 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~ 319 (411)
.|||+|||+.+........++ -...|.|||.+....++.++|+|++||++|||++ |+.||.
T Consensus 250 ------------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 250 ------------TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred ------------eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 678888888877655543322 2457999999999999999999999999999999 999999
Q ss_pred CCChHHHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCC
Q 015222 320 THENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLP 381 (411)
Q Consensus 320 ~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~ 381 (411)
+....++++.+.+... +.|. .+++.+-+++ ..||...|..||++..|.+...+.
T Consensus 318 G~~g~qIL~~iD~~erLpRPk----~csedIY~im----k~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 318 GCRGIQILKNIDAGERLPRPK----YCSEDIYQIM----KNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred CCCHHHHHHhccccccCCCCC----CChHHHHHHH----HHhccCCccccccHHHHHHhHHHH
Confidence 9999999998884321 2222 2344444444 455888899999999997554443
No 389
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=285.11 Aligned_cols=196 Identities=26% Similarity=0.478 Sum_probs=172.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhH---------HHHHHHHHHHHHhcCCCCCcceEEEeeeee
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---------AAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~---------~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~ 163 (411)
.|..++.+|+|+||.|++|.++.....|+||.+.+..-..+ .+-.|++||..++.+ .|+||++++++|+
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--SHENILKLLDFFE 639 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--Cccchhhhhheee
Confidence 59999999999999999999999999999999976543222 234599999999833 3455599999999
Q ss_pred cCCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccc
Q 015222 164 YRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFL 241 (411)
Q Consensus 164 ~~~~~~lv~e~~--~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~ 241 (411)
+++++||+||-- |-+|++++..+. .++|.+++.|++|++.|+++||++||||||||-+|+.++.+|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g---------- 707 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG---------- 707 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC----------
Confidence 999999999987 669999999876 799999999999999999999999999999999999998877
Q ss_pred cccCCCCCccccCCCCCCeeEeecCCcccccCC-CcccccCCCccccceecCCCC-CccchhHHHHHHHHHHHhCCCCCC
Q 015222 242 SRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-HSYVVSTRHYRAPEVILGLGW-NYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwSlGvil~elltg~~pf~ 319 (411)
-+||+|||.|...... ...++||..|+|||++.|.+| +..-|||+||++||.++....||.
T Consensus 708 -----------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 708 -----------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred -----------------eEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 6799999998876544 466899999999999999876 688999999999999999999985
No 390
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=274.42 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=194.0
Q ss_pred CCCceEEeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHH--HHhcCCCCCcce
Q 015222 78 KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ--RLARHDIGGTRC 155 (411)
Q Consensus 78 ~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~--~l~~~~i~~~~i 155 (411)
++...++.+...+...-++.+.||+|.||.||+|.++ |+.||||++...++ ..+.+|.+|.+ .|+|+||
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srdE--~SWfrEtEIYqTvmLRHENI----- 267 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRDE--RSWFRETEIYQTVMLRHENI----- 267 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccch--hhhhhHHHHHHHHHhccchh-----
Confidence 3345566667778889999999999999999999665 78899999976443 44555666655 4678887
Q ss_pred EEEeeeeecC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CceecCCCC
Q 015222 156 VQIRNWFDYR----NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKP 222 (411)
Q Consensus 156 v~~~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------givH~Dikp 222 (411)
..+++.-..+ ..++||++|- .|||+|||.+. .++.+...+++..++.||++||.. .|.|||||.
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 7777654332 2689999999 99999999996 499999999999999999999952 499999999
Q ss_pred CcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC----CCC--
Q 015222 223 ENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL----GWN-- 296 (411)
Q Consensus 223 ~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----~~~-- 296 (411)
.||||..+|.+-|+|+|++.+...+.. ..+...+..+||..|||||++... .+.
T Consensus 345 KNILVKkn~~C~IADLGLAv~h~~~t~--------------------~idi~~N~rVGTKRYMAPEvLdetin~~~Fesy 404 (513)
T KOG2052|consen 345 KNILVKKNGTCCIADLGLAVRHDSDTD--------------------TIDIPPNPRVGTKRYMAPEVLDETINMKHFESY 404 (513)
T ss_pred ccEEEccCCcEEEeeceeeEEecccCC--------------------cccCCCCCccceeeccChHHhhhhcChhhhhhh
Confidence 999998888554444444333332211 111223456899999999999753 122
Q ss_pred ccchhHHHHHHHHHHHhC----------CCCCCCC----ChHHHHHH---HHHHhCCCChhHHHhhhhhhhhhhccCCcc
Q 015222 297 YPCDLWSVGCILVELCSG----------EALFQTH----ENLEHLAM---MERVLGPLPHHMVIRADRRAEKYFRRGARL 359 (411)
Q Consensus 297 ~~~DiwSlGvil~elltg----------~~pf~~~----~~~~~~~~---i~~~~~~~p~~~~~~~~~~~~~li~~~l~~ 359 (411)
..+||||||.|+||++.. +.||.+. ...+.+.. +.+..+.+|..+. +..+..-+.++|.-
T Consensus 405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~---s~~~l~~m~klMke 481 (513)
T KOG2052|consen 405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWK---SDPALRVMAKLMKE 481 (513)
T ss_pred hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccc---cCHHHHHHHHHHHH
Confidence 568999999999999853 5788653 22333333 3444556666653 34455666777888
Q ss_pred CCCCCCCcHHHHHHHHhc
Q 015222 360 DWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 360 ~~~~rp~~R~t~~~il~~ 377 (411)
||..+|+.|.|+-.+.+.
T Consensus 482 CW~~Np~aRltALriKKt 499 (513)
T KOG2052|consen 482 CWYANPAARLTALRIKKT 499 (513)
T ss_pred hhcCCchhhhHHHHHHHH
Confidence 899999999999877653
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=299.85 Aligned_cols=254 Identities=22% Similarity=0.216 Sum_probs=195.6
Q ss_pred eEEEeeeccccceE-EEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 94 YRILSKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 94 y~i~~~lG~G~~g~-V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
|.-.+.+|.|+.|+ ||+|.. .|+.||||.+-. .....+++|+..|+.-. .|+|||++++.-.++.+.||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~--e~~~~A~rEi~lL~eSD----~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE--EFFDFAQREIQLLQESD----EHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh--HhHHHHHHHHHHHHhcc----CCCceEEEEeeccCCceEEEEe
Confidence 33456789999885 799954 578999998743 34456789999998764 2355599999999999999999
Q ss_pred ccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 173 EKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 173 e~~~~~L~~~l~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|.|..+|.+++... ..........+.++.|++.||++||+.+||||||||.||||+...
T Consensus 583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~------------------- 643 (903)
T KOG1027|consen 583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS------------------- 643 (903)
T ss_pred hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC-------------------
Confidence 99999999999874 211122255688999999999999999999999999999998632
Q ss_pred cccCCCCCCeeEeecCCcccccCCC------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCCh
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHEN 323 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~~ 323 (411)
.+...+++|+|||+++...... ....||.+|+|||++....-+.++|||||||++|..++ |..||...-
T Consensus 644 ---~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~- 719 (903)
T KOG1027|consen 644 ---ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL- 719 (903)
T ss_pred ---CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH-
Confidence 1234578999999988755443 34579999999999999888889999999999999999 599997532
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
+.-..|......+-. +......++.++|.+|++.+ |..||++.++|.||+|++..
T Consensus 720 -~R~~NIl~~~~~L~~-L~~~~d~eA~dLI~~ml~~d----P~~RPsa~~VL~HPlFW~~e 774 (903)
T KOG1027|consen 720 -ERQANILTGNYTLVH-LEPLPDCEAKDLISRMLNPD----PQLRPSATDVLNHPLFWDSE 774 (903)
T ss_pred -HhhhhhhcCccceee-eccCchHHHHHHHHHhcCCC----cccCCCHHHHhCCCccCChH
Confidence 222333333222111 11111128999999999999 99999999999999999754
No 392
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=296.99 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=208.1
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCC---cEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~---~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
..-.|.+.||.|.||.|++|+.+..| ..||||.++.. .+.+.+|..|+.||-+..|||| +++.++....+
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNI-----IrLEGVVTks~ 703 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IRLEGVVTKSK 703 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcE-----EEEEEEEecCc
Confidence 35678899999999999999988766 47999999854 4667889999999999999988 99999999999
Q ss_pred eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccC
Q 015222 167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSS 245 (411)
Q Consensus 167 ~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~ 245 (411)
.+.||+||| +|+|..||+.+.+ .|+..+...+++.|+.|++||-+.|+|||||-..||||+++
T Consensus 704 PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsn--------------- 767 (996)
T KOG0196|consen 704 PVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSN--------------- 767 (996)
T ss_pred eeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccc---------------
Confidence 999999999 9999999998874 59999999999999999999999999999999999998654
Q ss_pred CCCCccccCCCCCCeeEeecCCcccccCCCcc----ccc--CCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 015222 246 KDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY----VVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALF 318 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf 318 (411)
...|++|||+++..+++... .-| ...|.|||.+...+++.+|||||+|++|||.++ |..||
T Consensus 768 ------------LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 768 ------------LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred ------------eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 47788888888876544321 112 468999999999999999999999999999888 99999
Q ss_pred CCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 319 QTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 319 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
-+.++.+.+..|++...-.|+ .+++..+-.+.. -||+++=..||.+.+|+.++
T Consensus 836 WdmSNQdVIkaIe~gyRLPpP---mDCP~aL~qLMl----dCWqkdR~~RP~F~qiV~~l 888 (996)
T KOG0196|consen 836 WDMSNQDVIKAIEQGYRLPPP---MDCPAALYQLML----DCWQKDRNRRPKFAQIVSTL 888 (996)
T ss_pred cccchHHHHHHHHhccCCCCC---CCCcHHHHHHHH----HHHHHHhhcCCCHHHHHHHH
Confidence 999999999999887543322 234444444444 45777699999999998753
No 393
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=283.25 Aligned_cols=240 Identities=22% Similarity=0.348 Sum_probs=198.3
Q ss_pred EEEeeeccccceEEEEEEeCCC----CcEEEEEEeccc--hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 95 RILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~----~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
...+.||+|.||.||+|..... .-.||||..+.+ ....+.|..|..+++.+.||+| +++++++.+ ...
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphI-----ikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHI-----IKLIGVCVE-QPM 465 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcch-----hheeeeeec-cce
Confidence 3456899999999999986432 346999999753 3557889999999999988887 999999985 678
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+||||++ -|.|..||+.+. ..++......++.||+.||.|||+..+|||||-..|||+.+..
T Consensus 466 WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~---------------- 528 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ---------------- 528 (974)
T ss_pred eEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc----------------
Confidence 9999999 999999999876 4699999999999999999999999999999999999997654
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcc--ccc--CCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSY--VVS--TRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQTHE 322 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~g--t~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~~~ 322 (411)
.|||+|||++++.+....+ ..| .+.|||||.+.-..++.+||||-|||.+||++. |..||.+-.
T Consensus 529 -----------CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk 597 (974)
T KOG4257|consen 529 -----------CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK 597 (974)
T ss_pred -----------eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence 7899999999987765432 122 568999999999999999999999999999998 999999988
Q ss_pred hHHHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 323 NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 323 ~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
+.+.+..++++.. +.| +++++.+-.+..+|.+++ |.+||.+.++..
T Consensus 598 NsDVI~~iEnGeRlP~P----~nCPp~LYslmskcWaye----P~kRPrftei~~ 644 (974)
T KOG4257|consen 598 NSDVIGHIENGERLPCP----PNCPPALYSLMSKCWAYE----PSKRPRFTEIKA 644 (974)
T ss_pred ccceEEEecCCCCCCCC----CCCChHHHHHHHHHhccC----cccCCcHHHHHH
Confidence 8888877776543 233 345566666666665555 888888877654
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=314.10 Aligned_cols=241 Identities=16% Similarity=0.204 Sum_probs=180.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
..|...+.||+|+||.||+|++..++..||||.++..... ...|++++++++|+|| +++++++.+.+..|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnI-----v~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNI-----VKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCc-----ceEEEEEEcCCCCEEE
Confidence 3566778999999999999999999999999998643322 2346888888888877 9999999999999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH---ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
|||+ +++|.++++. +++..+..++.||+.||+||| +.+|+||||||+||+++.++.
T Consensus 762 ~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~--------------- 821 (968)
T PLN00113 762 HEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDE--------------- 821 (968)
T ss_pred EeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCc---------------
Confidence 9999 9999999953 789999999999999999999 669999999999999976652
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh--HH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN--LE 325 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~--~~ 325 (411)
.++. ||.+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 822 ------------~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~ 887 (968)
T PLN00113 822 ------------PHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGS 887 (968)
T ss_pred ------------eEEE-ecccccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCc
Confidence 2332 343322211 1223688999999999999999999999999999999999999854211 11
Q ss_pred HHHHHHHHh----------CCCCh--hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 326 HLAMMERVL----------GPLPH--HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 326 ~~~~i~~~~----------~~~p~--~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
......... ..... .........+.+++.+|++.+ |++||++.++++..
T Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~----P~~RPt~~evl~~L 948 (968)
T PLN00113 888 IVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATD----PTARPCANDVLKTL 948 (968)
T ss_pred HHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCC----chhCcCHHHHHHHH
Confidence 111111000 00000 011112234556777776666 99999999998774
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-35 Score=274.59 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=184.0
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC----e
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----H 167 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~----~ 167 (411)
...++.+.||+|.||.||+|.. +++.||||++.. ...+.+++|-+|.+.. +..|+||+++++.-+... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~--~~kqs~~~Ek~Iy~lp---~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE--QEKQSFQNEKNIYSLP---GMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCH--HHHHHHHhHHHHHhcc---CccchhHHHhhchhccCCccccc
Confidence 3567889999999999999954 568999999964 3345677777776543 445555699988766544 8
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---------CCceecCCCCCcEEEecCcccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE---------LRLIHTDLKPENILLVSAEYVKVPD 237 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---------~givH~Dikp~NIli~~~~~~~l~d 237 (411)
++||++|. .|+|.+||..+. +++....+|+..+++||+|||+ ..|+|||||..||||.+++
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl------ 353 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL------ 353 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC------
Confidence 99999999 999999999875 9999999999999999999997 2599999999999998877
Q ss_pred cccccccCCCCCccccCCCCCCeeEeecCCcccccCCC-----cccccCCCccccceecCC-CCC-----ccchhHHHHH
Q 015222 238 YKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH-----SYVVSTRHYRAPEVILGL-GWN-----YPCDLWSVGC 306 (411)
Q Consensus 238 f~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~-~~~-----~~~DiwSlGv 306 (411)
+..|+|||+|....... ...+||..|||||++.+. .+. .+.||||+|.
T Consensus 354 ---------------------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgL 412 (534)
T KOG3653|consen 354 ---------------------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGL 412 (534)
T ss_pred ---------------------cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHH
Confidence 56777777776543222 235899999999999875 333 5689999999
Q ss_pred HHHHHHhCCC------------CCCCC-------ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCc
Q 015222 307 ILVELCSGEA------------LFQTH-------ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATS 367 (411)
Q Consensus 307 il~elltg~~------------pf~~~-------~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~ 367 (411)
|||||++... ||+.. ++...+....+..+.+|..+... ...+.+...+.-||+++++.
T Consensus 413 VLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h---~~~~~l~et~EeCWDhDaeA 489 (534)
T KOG3653|consen 413 VLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKH---AGMAVLCETIEECWDHDAEA 489 (534)
T ss_pred HHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcC---ccHHHHHHHHHHHcCCchhh
Confidence 9999998643 34310 12222333345566777777654 23445555556668888999
Q ss_pred HHHHHHHH
Q 015222 368 RDSMRAVW 375 (411)
Q Consensus 368 R~t~~~il 375 (411)
|.|+.=+-
T Consensus 490 RLTA~Cv~ 497 (534)
T KOG3653|consen 490 RLTAGCVE 497 (534)
T ss_pred hhhhHHHH
Confidence 99987553
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-35 Score=280.61 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=214.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.++|+.+..+|.|+||.||+|+++.+++..|+|+++-.. ....-.+.|+-+++..+|+|| +.+++.+.....++
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~ni-----vay~gsylr~dklw 88 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNI-----VAYFGSYLRRDKLW 88 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcCh-----HHHHhhhhhhcCcE
Confidence 468999999999999999999999999999999998543 334556789999999999988 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
++|||| ||+|.+..+-.+ .+++.++..+.+..++||+|||++|-+|||||-.|||+++.|
T Consensus 89 icMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g----------------- 149 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG----------------- 149 (829)
T ss_pred EEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC-----------------
Confidence 999999 899999877665 799999999999999999999999999999999999998888
Q ss_pred CccccCCCCCCeeEeecCCcccccC---CCcccccCCCccccceec---CCCCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTFEHQ---DHSYVVSTRHYRAPEVIL---GLGWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
.+|++|||.+..+.. ....+.||++|||||+.. .+.|...+|||++|++..||-.-++|-....
T Consensus 150 ----------DvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 150 ----------DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred ----------ceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 556666666544332 234578999999999875 3479999999999999999999998876666
Q ss_pred hHHHHHHHHHHhCCCCh-hHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcc
Q 015222 323 NLEHLAMMERVLGPLPH-HMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVI 383 (411)
Q Consensus 323 ~~~~~~~i~~~~~~~p~-~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~ 383 (411)
....+..+.+-....|. .-...+++.+.+|++.+|.++ |.+||+++.+|.|+++...
T Consensus 220 pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altkn----pKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKN----PKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCC----CccCCChhhheeceeeccc
Confidence 66666666654433332 223456788999999999999 9999999999999998864
No 397
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=2.5e-33 Score=258.81 Aligned_cols=282 Identities=22% Similarity=0.324 Sum_probs=201.5
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCC---CCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~---~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~ 165 (411)
.+.+.|.++++||+|+|++||+|.+.. .++.||+|.+..... ...+.+|++.|..+. ++.||+++.+.+..+
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~g----G~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLG----GSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhc----cchhhhcchhhhccC
Confidence 456789999999999999999999887 788999999875433 355888999999986 334569999999999
Q ss_pred CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecC-cccccCCcccccc
Q 015222 166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKFLSR 243 (411)
Q Consensus 166 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~-~~~~l~df~~~~~ 243 (411)
+..++||||+ .....+++.. ++...++.++..++.||.++|.+|||||||||+|+|.+.. +.-.|.|||++-+
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHH
Confidence 9999999999 7777777664 6788999999999999999999999999999999999865 5667889998763
Q ss_pred cCCCC----Ccc-c--cCCCCCCeeEeecCCcc---c---c---c----CCCcccccCCCccccceecCC-CCCccchhH
Q 015222 244 SSKDG----SYF-K--NLPKSSAIKLIDFGSTT---F---E---H----QDHSYVVSTRHYRAPEVILGL-GWNYPCDLW 302 (411)
Q Consensus 244 ~~~~~----~~~-~--~~~~~~~~kl~Dfg~a~---~---~---~----~~~~~~~gt~~y~aPE~~~~~-~~~~~~Diw 302 (411)
..... ... . ....-..-..-.+..+. . . . .......||++|+|||++... .-++++|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 21110 000 0 00000000000011110 0 0 0 011235799999999999876 568999999
Q ss_pred HHHHHHHHHHhCCCCCCCC-ChHHHHHHHHHHh------------CC---------------------C-----------
Q 015222 303 SVGCILVELCSGEALFQTH-ENLEHLAMMERVL------------GP---------------------L----------- 337 (411)
Q Consensus 303 SlGvil~elltg~~pf~~~-~~~~~~~~i~~~~------------~~---------------------~----------- 337 (411)
|.|||+.-+++++.||-.. ++.+.+..+..+. +. +
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 9999999999999998432 2222222111111 11 0
Q ss_pred ---ChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 338 ---PHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 338 ---p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
+.......+..+-+++++||..| |.+|.|++++|+|+||...+
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~n----p~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELN----PQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCC----hhhcccHHHHhcCcCCcchh
Confidence 00011112336788999999999 99999999999999999544
No 398
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2e-33 Score=245.32 Aligned_cols=256 Identities=24% Similarity=0.299 Sum_probs=198.2
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeee-eecCCeE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW-FDYRNHI 168 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~-~~~~~~~ 168 (411)
+.+.|.|.+.||+|.||.+-+|+++.++..+|+|.+........+|.+|..---.|.|| .||+.-|+. |+..+.+
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H----~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPH----QHIIDTYEVAFQTSDAY 97 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccc----hhhhHHHHHHhhcCceE
Confidence 45789999999999999999999999999999999988777788888888665555432 344666654 6777899
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
+++|||+ -|+|..-+...+ +.|...+.++.|+++||.|+|++++||||||.+||||-..+
T Consensus 98 vF~qE~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d---------------- 158 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD---------------- 158 (378)
T ss_pred EEeeccCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC----------------
Confidence 9999999 899988877654 88999999999999999999999999999999999996532
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC-----CCCccchhHHHHHHHHHHHhCCCCCCCCC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-----GWNYPCDLWSVGCILVELCSGEALFQTHE 322 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwSlGvil~elltg~~pf~~~~ 322 (411)
..++||||||.++..+......--+..|.+||+.... ...+.+|||.||+++|.++||++||+...
T Consensus 159 ---------f~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 159 ---------FYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred ---------ccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh
Confidence 3389999999998776655555557789999987532 35789999999999999999999998432
Q ss_pred hH-HHHHHHH----HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH---HHHHHHHhcCCCCc
Q 015222 323 NL-EHLAMME----RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR---DSMRAVWKLLRLPV 382 (411)
Q Consensus 323 ~~-~~~~~i~----~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R---~t~~~il~~~~~~~ 382 (411)
.. ..+.... +.....|. .....++.+..++++-|..+ +..| -+++......|...
T Consensus 230 ~~d~~Y~~~~~w~~rk~~~~P~-~F~~fs~~a~r~Fkk~lt~~----~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 230 IMDKPYWEWEQWLKRKNPALPK-KFNPFSEKALRLFKKSLTPR----FKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred ccCchHHHHHHHhcccCccCch-hhcccCHHHHHHHHHhcCCc----ccccchhHHHHHHHHHHHHHh
Confidence 21 1222222 22223343 34567788888999998888 5555 55555555556543
No 399
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.98 E-value=4e-33 Score=295.69 Aligned_cols=210 Identities=17% Similarity=0.177 Sum_probs=161.5
Q ss_pred EEEeeeee-------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEe
Q 015222 156 VQIRNWFD-------YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228 (411)
Q Consensus 156 v~~~~~~~-------~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~ 228 (411)
..++++|. ....++++||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||||+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~ 114 (793)
T PLN00181 36 RSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMS 114 (793)
T ss_pred HHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEc
Confidence 55566552 234678889988889999997543 4699999999999999999999999999999999999999
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC-------------------CcccccCCCccccce
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------------------HSYVVSTRHYRAPEV 289 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------~~~~~gt~~y~aPE~ 289 (411)
..|.+|++|||+++.... +....+|++|||+++..... ....+||+.|||||+
T Consensus 115 ~~~~~k~~d~~~~~~~~~--------~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 115 SFNHVSFIESASCSDSGS--------DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred ccCcEEEeeccccCcccc--------cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 999999999998765432 23457899999998753210 011468999999999
Q ss_pred ecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH
Q 015222 290 ILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD 369 (411)
Q Consensus 290 ~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~ 369 (411)
+.+..++.++|||||||+||||++|..|+.... ..+..+... ..|...... .....+++.+||..+ |.+||
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~L~~~----P~~Rp 257 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHR--VLPPQILLN-WPKEASFCLWLLHPE----PSCRP 257 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHh--hcChhhhhc-CHHHHHHHHHhCCCC----hhhCc
Confidence 999999999999999999999999999875422 122222211 123222222 233557788888888 99999
Q ss_pred HHHHHHhcCCCCcc
Q 015222 370 SMRAVWKLLRLPVI 383 (411)
Q Consensus 370 t~~~il~~~~~~~~ 383 (411)
++.++++|+||...
T Consensus 258 s~~eil~h~~~~~~ 271 (793)
T PLN00181 258 SMSELLQSEFINEP 271 (793)
T ss_pred ChHHHhhchhhhhh
Confidence 99999999999864
No 400
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-32 Score=271.43 Aligned_cols=241 Identities=20% Similarity=0.245 Sum_probs=190.7
Q ss_pred eEEEeeeccccceEEEEEEeCCCC----cEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~----~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.+..++||+|+||+||+|.+...| .+||||++.... +...++.+|+-++.++.|+|+ +++++++....
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl-----~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNL-----LRLLGVCMLST- 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchH-----HHHhhhcccch-
Confidence 445679999999999999986555 478999987543 446788999999999998887 99999987654
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+-||++|+ .|+|.|+++.++ ..+.......|..||++||.|||++++|||||-..||||..-.
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~--------------- 835 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN--------------- 835 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC---------------
Confidence 88999999 999999999876 4688899999999999999999999999999999999997655
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcc-----cccCCCccccceecCCCCCccchhHHHHHHHHHHHh-CCCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY-----VVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS-GEALFQT 320 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~-----~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~pf~~ 320 (411)
.+||.|||+++........ ..-.+.|||-|.+....|+.++|||||||++||++| |..|+.+
T Consensus 836 ------------hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g 903 (1177)
T KOG1025|consen 836 ------------HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG 903 (1177)
T ss_pred ------------eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence 5677777777765443322 122567999999999999999999999999999999 9999999
Q ss_pred CChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHH
Q 015222 321 HENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375 (411)
Q Consensus 321 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il 375 (411)
....++-..++.... ++. .+..+-.+--++.+|+..| +..||+++++.
T Consensus 904 i~~~eI~dlle~geR-Lsq--PpiCtiDVy~~mvkCwmid----~~~rp~fkel~ 951 (1177)
T KOG1025|consen 904 IPAEEIPDLLEKGER-LSQ--PPICTIDVYMVMVKCWMID----ADSRPTFKELA 951 (1177)
T ss_pred CCHHHhhHHHhcccc-CCC--CCCccHHHHHHHHHHhccC----cccCccHHHHH
Confidence 888777666655432 211 1223344555566665555 77777776654
No 401
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=272.73 Aligned_cols=245 Identities=21% Similarity=0.360 Sum_probs=189.8
Q ss_pred CCeEEEeeeccccceEEEEEEeCC-------CCcEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeee
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW 161 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~-------~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~ 161 (411)
++..+.+.||+|.||.|++|.-.. ....||||.++... ...+.+..|+++++.+. |+|+ +.+++.
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~ni-----v~llG~ 370 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNI-----VNLLGA 370 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcch-----hhheee
Confidence 344667799999999999997431 14579999997433 45677889999999986 5554 999999
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEE
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNS------------Y--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL 226 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIl 226 (411)
+...+.+++|+||+ .|+|.++++... . ..++..+...++.||+.|++||++.++|||||-..|||
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 99999999999999 999999998765 1 13889999999999999999999999999999999999
Q ss_pred EecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcc----ccc--CCCccccceecCCCCCccch
Q 015222 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSY----VVS--TRHYRAPEVILGLGWNYPCD 300 (411)
Q Consensus 227 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~----~~g--t~~y~aPE~~~~~~~~~~~D 300 (411)
+..+. .+||+|||+|+........ ..| ...|||||.+....|+.++|
T Consensus 451 i~~~~---------------------------~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSD 503 (609)
T KOG0200|consen 451 ITKNK---------------------------VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSD 503 (609)
T ss_pred ecCCC---------------------------EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccch
Confidence 97765 6788888888754333222 122 23499999999999999999
Q ss_pred hHHHHHHHHHHHh-CCCCCCCCC-hHHHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 301 LWSVGCILVELCS-GEALFQTHE-NLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 301 iwSlGvil~ellt-g~~pf~~~~-~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
||||||+|||+++ |..||.+.. ..+.++.+..+.. ..|. .+++++-+++ ..||+.+|++||++.++.+
T Consensus 504 VWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~----~c~~eiY~iM----~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 504 VWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPE----HCSDEIYDLM----KSCWNADPEDRPTFSECVE 574 (609)
T ss_pred hhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCC----CCCHHHHHHH----HHHhCCCcccCCCHHHHHH
Confidence 9999999999999 999999855 4444444444322 2222 2334444444 4557777999999998875
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=9.5e-31 Score=235.49 Aligned_cols=206 Identities=37% Similarity=0.569 Sum_probs=172.5
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
|.+.+.||.|++|.||++.+..+++.+|+|.+..... ..+.+.+|++.++.+.|+++ +++++++......+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i-----~~~~~~~~~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNI-----VKLYGVFEDPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCh-----hhheeeeecCCceEEE
Confidence 5678999999999999999998899999999975433 46778889999999987776 9999998888999999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+|++ +++|.+++..... .+++..+..++.+++.+|.+||+.|++|+||+|+||+++.++
T Consensus 76 ~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~------------------- 135 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDG------------------- 135 (225)
T ss_pred EeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-------------------
Confidence 9999 7799999987651 188999999999999999999999999999999999997655
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----cccccCCCcccccee-cCCCCCccchhHHHHHHHHHHHhCCCCCCC-CChH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----SYVVSTRHYRAPEVI-LGLGWNYPCDLWSVGCILVELCSGEALFQT-HENL 324 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~~DiwSlGvil~elltg~~pf~~-~~~~ 324 (411)
.++|+|||.+....... ....++..|++||.+ ....++.++||||||+++++|++|+.||.. .+..
T Consensus 136 --------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~ 207 (225)
T smart00221 136 --------LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFT 207 (225)
T ss_pred --------CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhH
Confidence 67788888776654432 345678899999998 566788899999999999999999999976 3333
Q ss_pred -HHHHHHHH
Q 015222 325 -EHLAMMER 332 (411)
Q Consensus 325 -~~~~~i~~ 332 (411)
.....+..
T Consensus 208 ~~~~~~~~~ 216 (225)
T smart00221 208 SLLSDVWSF 216 (225)
T ss_pred HHHHHHHhc
Confidence 44444443
No 403
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=2e-30 Score=229.98 Aligned_cols=207 Identities=36% Similarity=0.573 Sum_probs=179.0
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-C
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G 176 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~ 176 (411)
||+|++|.||++.+..+++.+++|++..... ..+.+.+|+..++.+.|+++ +++++++......+++||++ +
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-----VKLYGVFEDENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-----eeEeeeeecCCeEEEEEecCCC
Confidence 6899999999999988899999999986544 35678899999999988666 99999999889999999999 6
Q ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec-CcccccCCcccccccCCCCCccccCC
Q 015222 177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKFLSRSSKDGSYFKNLP 255 (411)
Q Consensus 177 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~-~~~~~l~df~~~~~~~~~~~~~~~~~ 255 (411)
++|.+++.... ..++...+..++.+++.+|++||+.|++|+||+|.||+++. ++
T Consensus 76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~------------------------ 130 (215)
T cd00180 76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNG------------------------ 130 (215)
T ss_pred CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCC------------------------
Confidence 99999998753 35899999999999999999999999999999999999976 44
Q ss_pred CCCCeeEeecCCcccccCC---CcccccCCCccccceecCC-CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 256 KSSAIKLIDFGSTTFEHQD---HSYVVSTRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 256 ~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
.++|+|||.+...... .....+...|++||.+... .++.++|+|++|+++++|
T Consensus 131 ---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------- 187 (215)
T cd00180 131 ---KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------- 187 (215)
T ss_pred ---cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------
Confidence 6788888877655443 2335678899999999887 788999999999999999
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLL 378 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~ 378 (411)
..+.+++.+|+..+ |+.||++.++++++
T Consensus 188 ---------------~~~~~~l~~~l~~~----p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------PELKDLIRKMLQKD----PEKRPSAKEILEHL 215 (215)
T ss_pred ---------------HHHHHHHHHHhhCC----cccCcCHHHHhhCC
Confidence 45778889998888 99999999999875
No 404
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-28 Score=232.94 Aligned_cols=209 Identities=28% Similarity=0.360 Sum_probs=172.1
Q ss_pred CeEEEeeeccccceEEEEEEeCCCC-cEEEEEEeccchhh-hHHHHHHHHHHHHHhcCCCCCcceEEEeeee-ecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~-~~vavK~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~ 169 (411)
+|++.++||+|+||.||+|.+..++ ..+|+|+....... ...+..|+.++..+.. .....++..+++.. ..+.+.|
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence 8999999999999999999988775 67899988654322 2267889999999985 22234568888888 5778999
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||+.+|.+|.++........++..++..|+.|++.+|++||+.|++||||||+|++++..+
T Consensus 98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~------------------ 159 (322)
T KOG1164|consen 98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS------------------ 159 (322)
T ss_pred EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC------------------
Confidence 99999999999998766667899999999999999999999999999999999999997643
Q ss_pred ccccCCCCCCeeEeecCCcc--ccc-CC----------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTT--FEH-QD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~--~~~-~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
......+.|.|||+++ ... .. .....||..|+++....+...+.+.|+||++.++.||+.|..
T Consensus 160 ----~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~L 235 (322)
T KOG1164|consen 160 ----RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSL 235 (322)
T ss_pred ----CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCC
Confidence 0112368888888887 210 10 123569999999999999999999999999999999999999
Q ss_pred CCCCCChH
Q 015222 317 LFQTHENL 324 (411)
Q Consensus 317 pf~~~~~~ 324 (411)
||.+....
T Consensus 236 PW~~~~~~ 243 (322)
T KOG1164|consen 236 PWEALEMT 243 (322)
T ss_pred CCcccccc
Confidence 99776543
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-29 Score=213.04 Aligned_cols=249 Identities=23% Similarity=0.331 Sum_probs=195.0
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
..++|+++++||.|+||.+|+|....+|+.||||+-.... ....+..|..+...|.+- ..+..+..++...++-.
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g----~GiP~i~~y~~e~~ynv 87 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGG----VGIPHIRHYGTEKDYNV 87 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccC----CCCchhhhhccccccce
Confidence 3578999999999999999999999999999999865432 334567789999988753 22356666777788899
Q ss_pred EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 170 lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
+||+++|.+|.++..-.. +.++..++.-++-|++.-++|+|.+++|||||||+|+|.+-+-
T Consensus 88 lVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr------------------ 148 (341)
T KOG1163|consen 88 LVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR------------------ 148 (341)
T ss_pred eeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc------------------
Confidence 999999999999987554 4799999999999999999999999999999999999986543
Q ss_pred ccccCCCCCCeeEeecCCcccccCC----------CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEHQD----------HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQ 319 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~ 319 (411)
....+.|+|||+|+...+. .....||..|++--...+..-+...|+=|+|.+|..+..|..||+
T Consensus 149 ------h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 149 ------HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred ------ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence 2346889999998754322 234679999999888888788899999999999999999999999
Q ss_pred CCChH---HHHHHHHHHhCCCC-hhHHHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 320 THENL---EHLAMMERVLGPLP-HHMVIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 320 ~~~~~---~~~~~i~~~~~~~p-~~~~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
+.... +..++|.+..-..| +.+-...+.++..++.-|-..-+.+.|+-+
T Consensus 223 glka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 223 GLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred ccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 87554 44444444433333 334445566677777777666666767653
No 406
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=230.68 Aligned_cols=247 Identities=16% Similarity=0.177 Sum_probs=186.1
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCCC-----CcEEEEEEeccch--hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~~-----~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~ 162 (411)
...|++....+.+|.||.||.|.+++. .+.|-+|.++... .....+..|.-.+..+.|+|+ ..+.++.
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nl-----l~V~~V~ 356 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNL-----LSVLGVS 356 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCc-----cceeEEE
Confidence 346788889999999999999977643 2456677665432 233444556666666666655 8887765
Q ss_pred e-cCCeEEEEEccC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 163 D-YRNHICIVFEKL-GPSLYDFLRKN------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 163 ~-~~~~~~lv~e~~-~~~L~~~l~~~------~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
. +....++++.+. -|+|..|+... ..+.++..+...++.|++.|++|||+.||||.||-..|.+|++.
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~---- 432 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQ---- 432 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhh----
Confidence 4 456788999999 88999999822 23457778889999999999999999999999999999998754
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccc-----cCCCccccceecCCCCCccchhHHHHHHHH
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVV-----STRHYRAPEVILGLGWNYPCDLWSVGCILV 309 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 309 (411)
.++||+|-.+++..-....... ....|||||.+.+..|+.++|+|||||+||
T Consensus 433 -----------------------LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW 489 (563)
T KOG1024|consen 433 -----------------------LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW 489 (563)
T ss_pred -----------------------eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence 4778888877775443333222 356799999999999999999999999999
Q ss_pred HHHh-CCCCCCCCChHHHHHHHHHHhC-CCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHh
Q 015222 310 ELCS-GEALFQTHENLEHLAMMERVLG-PLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWK 376 (411)
Q Consensus 310 ellt-g~~pf~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~ 376 (411)
||+| |+.||..-+..+....+..+.. .-|. ++++++-. .|..||.-.|++||+++|+..
T Consensus 490 ELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~----NCPDeLf~----vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 490 ELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPF----NCPDELFT----VMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHhcCCCCccccCHHHHHHHHhccceecCCC----CCcHHHHH----HHHHHHhcCcccCCCHHHHHH
Confidence 9999 9999999999888777766432 1111 23333333 345667777999999999875
No 407
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-28 Score=217.34 Aligned_cols=260 Identities=23% Similarity=0.301 Sum_probs=202.8
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.-.|+|.++||+|+||++++|.+..+++.||||.-.. ......+..|....+.|... ++|..++-+...+.+-.|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g~----~GIP~vYYFGqeG~~NiL 101 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGGT----EGIPQVYYFGQEGKYNIL 101 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcCC----CCCCceeeeccccchhhh
Confidence 3479999999999999999999999999999997532 33345577788888888632 344677767777788999
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
|||++|.+|.|+..-.+ +.|+...+..++.|++.-++|+|++.+|.|||||+|+||+.-+
T Consensus 102 VidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~------------------- 161 (449)
T KOG1165|consen 102 VIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPG------------------- 161 (449)
T ss_pred hhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCC-------------------
Confidence 99999999999988665 6899999999999999999999999999999999999998755
Q ss_pred cccCCCCCCeeEeecCCcccccCCC----------cccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCC
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDH----------SYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQT 320 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~ 320 (411)
..+...+.|+|||+|+...... ....||..||+--...|..-+..-|+=|||-+++..|-|..||.+
T Consensus 162 ---~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG 238 (449)
T KOG1165|consen 162 ---TKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 238 (449)
T ss_pred ---CCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence 2344578999999998754332 346799999999999999999999999999999999999999987
Q ss_pred C---ChHHHHHHHHHHhCC-CChhHHHhhhhhhhhhhccCCccCCCCCCCc---HHHHHHHHhcC
Q 015222 321 H---ENLEHLAMMERVLGP-LPHHMVIRADRRAEKYFRRGARLDWPDGATS---RDSMRAVWKLL 378 (411)
Q Consensus 321 ~---~~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~---R~t~~~il~~~ 378 (411)
. +..+.+++|-..... ....+-...+.++..+++-.-+.++.+.|+- |-.+.++|...
T Consensus 239 LKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 239 LKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred ccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhc
Confidence 5 445555555443332 2333444555566666655555565555653 55566666543
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=1.4e-28 Score=213.61 Aligned_cols=164 Identities=23% Similarity=0.261 Sum_probs=126.4
Q ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCC
Q 015222 177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPK 256 (411)
Q Consensus 177 ~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 256 (411)
|+|.+++..++ ..+++..++.++.||+.||+|||+++ ||+|||++.++
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~------------------------- 48 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDG------------------------- 48 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCcc-------------------------
Confidence 68999998654 36999999999999999999999999 99999998766
Q ss_pred CCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhC
Q 015222 257 SSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENL-EHLAMMERVLG 335 (411)
Q Consensus 257 ~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~-~~~~~i~~~~~ 335 (411)
.+++ ||++....... ..||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+.....
T Consensus 49 --~~~~--fG~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 122 (176)
T smart00750 49 --LLKL--DGSVAFKTPEQ--SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP 122 (176)
T ss_pred --ceee--ccceEeecccc--CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence 4455 67665543322 26899999999999999999999999999999999999999765432 22333322222
Q ss_pred CC-Ch--hHHHhhhh--hhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 336 PL-PH--HMVIRADR--RAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 336 ~~-p~--~~~~~~~~--~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.. +. ......+. .+.+++.+|+..+ |..||++.++++|+|+..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~----p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 123 ADDPRDRSNLESVSAARSFADFMRVCASRL----PQRREAANHYLAHCRALF 170 (176)
T ss_pred cCCccccccHHHHHhhhhHHHHHHHHHhcc----cccccCHHHHHHHHHHHH
Confidence 11 11 11223333 6899999998888 999999999999998753
No 409
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=4.2e-28 Score=245.54 Aligned_cols=262 Identities=22% Similarity=0.315 Sum_probs=198.3
Q ss_pred CCCe-EEEeeeccccceEEEEEEeCCCCcEEEEEEec----cch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee
Q 015222 91 TPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 91 ~~~y-~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~----~~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~ 162 (411)
.+.| .....+|.|++|.|+.+......+.++.|.++ ... .....+..|+-+-..+.|+++ +..+..+
T Consensus 316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~-----~e~l~~~ 390 (601)
T KOG0590|consen 316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNI-----IETLDIV 390 (601)
T ss_pred ccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCch-----hhhHHHH
Confidence 3445 45678999999999888887776666666554 111 111224456666667777766 6666666
Q ss_pred ecCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccc
Q 015222 163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLS 242 (411)
Q Consensus 163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~ 242 (411)
.+.....-+||||.++|+.++.... .+...++..+++||+.|++|+|+.||.|||||++|+++...|
T Consensus 391 ~~~~~~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g----------- 457 (601)
T KOG0590|consen 391 QEIDGILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG----------- 457 (601)
T ss_pred hhcccchhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC-----------
Confidence 5555455559999449999998864 688999999999999999999999999999999999998877
Q ss_pred ccCCCCCccccCCCCCCeeEeecCCcccccCC-------CcccccCCCccccceecCCCCC-ccchhHHHHHHHHHHHhC
Q 015222 243 RSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-------HSYVVSTRHYRAPEVILGLGWN-YPCDLWSVGCILVELCSG 314 (411)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~-~~~DiwSlGvil~elltg 314 (411)
.+||+|||.+...... ....+|+..|+|||++.+..|+ ...||||.|++++.|.+|
T Consensus 458 ----------------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~ 521 (601)
T KOG0590|consen 458 ----------------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILG 521 (601)
T ss_pred ----------------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecC
Confidence 5677777766543221 2336899999999999999987 568999999999999999
Q ss_pred CCCCCCCChHHHH-----HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCCC
Q 015222 315 EALFQTHENLEHL-----AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSAS 389 (411)
Q Consensus 315 ~~pf~~~~~~~~~-----~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~~ 389 (411)
+.||......+.. .........-+..+...++.+.+.+|.+||+.+ |.+|.|+++|++.+||+.+......
T Consensus 522 ~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~----P~~R~ti~~i~~d~W~~~i~~c~v~ 597 (601)
T KOG0590|consen 522 RFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLD----PTKRITIEQILNDEWIRSIECCHVD 597 (601)
T ss_pred CCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCC----hhheecHHHHhhChHhhhcceEEec
Confidence 9999764433221 111111123355667778889999999999999 9999999999999999999876655
Q ss_pred C
Q 015222 390 P 390 (411)
Q Consensus 390 ~ 390 (411)
+
T Consensus 598 ~ 598 (601)
T KOG0590|consen 598 P 598 (601)
T ss_pred c
Confidence 4
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=2.5e-26 Score=218.87 Aligned_cols=159 Identities=19% Similarity=0.171 Sum_probs=121.5
Q ss_pred cCCCeEEEeeeccccceEEEEEEeCC-CCcEEEEEEeccc------hhhhHHHHHHHHHHHHHhcCCCCCcceE-EEeee
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCV-QIRNW 161 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~------~~~~~~~~~E~~~l~~l~~~~i~~~~iv-~~~~~ 161 (411)
+.++|++.+.||+|+||+||+|+++. +++.||||++... ......+.+|+.+|+++.|+++ + .++++
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~i-----v~~l~~~ 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGV-----VPQLLAT 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCC-----CcEEEEc
Confidence 45789999999999999999999876 6788899986532 2235668899999999999887 4 44432
Q ss_pred eecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEecCcccccCCcc
Q 015222 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Di-kp~NIli~~~~~~~l~df~ 239 (411)
+..|+||||+ |++|.. +.. .. ...++.|+++||.|||++||+|||| ||+|||++.++
T Consensus 91 ----~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-------- 149 (365)
T PRK09188 91 ----GKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-------- 149 (365)
T ss_pred ----CCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC--------
Confidence 4579999999 888863 211 11 1467899999999999999999999 99999997666
Q ss_pred cccccCCCCCccccCCCCCCeeEeecCCcccccCC-----------CcccccCCCccccceecCC
Q 015222 240 FLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD-----------HSYVVSTRHYRAPEVILGL 293 (411)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~ 293 (411)
.++|+|||+|+..... -.+..+++.|+|||.+...
T Consensus 150 -------------------~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 150 -------------------EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred -------------------CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 4666666666543221 1345688899999998643
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=4.2e-25 Score=208.80 Aligned_cols=251 Identities=31% Similarity=0.453 Sum_probs=194.1
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh----hhHHHHHHHHHHHHHhcC-CCCCcceEEEeeeeecCCeE
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~~~~~~~ 168 (411)
|.+.+.||.|+||.||++.+. ..+++|.+..... ....+.+|+.++..+.|+ ++ +.+.+.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI-----VKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcce-----eeEEEEEecCCEE
Confidence 788999999999999999887 7799999975432 366788999999999888 45 9999999877788
Q ss_pred EEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
+++++++ ++++.+++..... ..++...+..++.|++.++.|+|+.|++||||||+||+++..+.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~-------------- 139 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGR-------------- 139 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCC--------------
Confidence 9999999 8999977765431 15899999999999999999999999999999999999976551
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCC---------CcccccCCCccccceecC---CCCCccchhHHHHHHHHHHHhC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQD---------HSYVVSTRHYRAPEVILG---LGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~gt~~y~aPE~~~~---~~~~~~~DiwSlGvil~elltg 314 (411)
.++++|||.+...... .....||..|+|||.+.+ ..++...|+||+|++++++++|
T Consensus 140 ------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~ 207 (384)
T COG0515 140 ------------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTG 207 (384)
T ss_pred ------------eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhC
Confidence 4677777776543222 245689999999999988 5788999999999999999999
Q ss_pred CCCCCCCCh----HHHHHHHHHHhCC-CChhHHHhh----hhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 315 EALFQTHEN----LEHLAMMERVLGP-LPHHMVIRA----DRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 315 ~~pf~~~~~----~~~~~~i~~~~~~-~p~~~~~~~----~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
..||..... ......+...... ......... ...+.+++.+++..+ |..|.+..+...+.+...
T Consensus 208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~~ 280 (384)
T COG0515 208 LPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKD----PKNRLSSSSDLSHDLLAH 280 (384)
T ss_pred CCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcC----chhcCCHHHHhhchHhhC
Confidence 999887663 3444444433322 222222111 246788888888887 777777777666644443
No 412
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-26 Score=224.29 Aligned_cols=239 Identities=24% Similarity=0.345 Sum_probs=190.6
Q ss_pred eccccceEEEEEEe---CCCCcEEEEEEeccch---hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 100 MGEGTFGQVVECFD---NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 100 lG~G~~g~V~~a~~---~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
+|+|.||.|++++. ...+..+|+|+.++.. ........|..++..++ |+.+ +.+...|+.+...++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~-----v~lhyafqt~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFL-----VKLHYAFQTDGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCce-----eeeeeeeccccchhHhh
Confidence 69999999997753 3456779999886432 11224455777777776 4544 99999999999999999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
++. |+.|...+.... .+.+.....+...++.|++++|+.||+|||+|++||+++.+|+
T Consensus 77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Gh------------------- 135 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGH------------------- 135 (612)
T ss_pred hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCc-------------------
Confidence 999 889988887765 6888899999999999999999999999999999999998884
Q ss_pred ccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMME 331 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~ 331 (411)
+++.|||.++..-..... +||..|||||++. ....++|.||||+++|||+||..||.+ +....|.
T Consensus 136 --------i~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il 200 (612)
T KOG0603|consen 136 --------IKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRIL 200 (612)
T ss_pred --------cccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHh
Confidence 566666666544333222 8999999999998 567899999999999999999999987 6777777
Q ss_pred HHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHH-----HHHHHHhcCCCCcccccC
Q 015222 332 RVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRD-----SMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~-----t~~~il~~~~~~~~~~~~ 387 (411)
+....+|..++ ..+++++..++..+ |..|. .+.++++|++|+.+++..
T Consensus 201 ~~~~~~p~~l~----~~a~~~~~~l~~r~----p~nrLg~~~~~~~eik~h~f~~~i~~~~ 253 (612)
T KOG0603|consen 201 KAELEMPRELS----AEARSLFRQLFKRN----PENRLGAGPDGVDEIKQHEFFQSIDWNE 253 (612)
T ss_pred hhccCCchhhh----HHHHHHHHHHHhhC----HHHHhccCcchhHHHhccchheeeeHhh
Confidence 77777777765 45666777777777 55554 458999999999999873
No 413
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.92 E-value=7e-26 Score=230.01 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=184.5
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch--hhhHHHH---HHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAM---IEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~---~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.|...+.||.+.|=+|.+|++.+. .|+||++-+.. ...+.+. +|++ ...+++| |++.+..+...+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~p-----n~lPfqk~~~t~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAP-----NCLPFQKVLVTDKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCC-----cccchHHHHHhhHH
Confidence 688899999999999999976543 39999985432 2223333 3333 3334444 55888888777888
Q ss_pred EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 168 ~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
.|+|-+|...+|+|.+..+. .+..-+.+.|+.||+.||..+|..||+|||||.+||||++.+.+.|+||...+-.-.+
T Consensus 96 AylvRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP 173 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP 173 (1431)
T ss_pred HHHHHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence 99999999999999999876 6888899999999999999999999999999999999999999999999755433221
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC----------C-CCccchhHHHHHHHHHHHh-CC
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL----------G-WNYPCDLWSVGCILVELCS-GE 315 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~DiwSlGvil~ellt-g~ 315 (411)
.. -=+||+.-..... .-..|+|||.+... . .+++.||||+||+++||++ |+
T Consensus 174 eD-----------NPadf~fFFDTSr------RRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~ 236 (1431)
T KOG1240|consen 174 ED-----------NPADFTFFFDTSR------RRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR 236 (1431)
T ss_pred CC-----------CcccceEEEecCC------ceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence 11 1146654222111 12359999998641 2 6789999999999999999 89
Q ss_pred CCCCCCChHHHHHHHHHHhCCCChhHHHhh-hhhhhhhhccCCccCCCCCCCcHHHHHHHHhc
Q 015222 316 ALFQTHENLEHLAMMERVLGPLPHHMVIRA-DRRAEKYFRRGARLDWPDGATSRDSMRAVWKL 377 (411)
Q Consensus 316 ~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~-~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~ 377 (411)
+||. ..++-.+..+....++.....+ +..++++|..|++.| |++|.++++.|+.
T Consensus 237 PlF~----LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rd----Ps~RlSAedyL~~ 291 (1431)
T KOG1240|consen 237 PLFT----LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRD----PSKRLSAEDYLQK 291 (1431)
T ss_pred Cccc----HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccC----chhccCHHHHHHh
Confidence 9994 2333334433333333333333 346889999999999 9999999999976
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.91 E-value=2.2e-24 Score=191.54 Aligned_cols=177 Identities=14% Similarity=0.153 Sum_probs=127.3
Q ss_pred CCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhH----------HHHHHHHHHHHHhcCCCCCcceE
Q 015222 87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----------AAMIEIDVLQRLARHDIGGTRCV 156 (411)
Q Consensus 87 ~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~----------~~~~E~~~l~~l~~~~i~~~~iv 156 (411)
.+.+.++|++++.||.|+||.||++.+ ++..+|||+++......+ .+.+|+..+.++.|+++..+...
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 345688999999999999999999755 466799999974322111 25789999999999998444322
Q ss_pred EE---eeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcc
Q 015222 157 QI---RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232 (411)
Q Consensus 157 ~~---~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~ 232 (411)
.. ...+...+..++||||+ |.+|.++. .+++. ...+++.+|..+|+.|++|||+||+||+++.+|
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhh------hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-
Confidence 11 11122245689999999 78998763 23332 456999999999999999999999999997543
Q ss_pred cccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHH
Q 015222 233 VKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELC 312 (411)
Q Consensus 233 ~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell 312 (411)
++|+|||.+......... -.+.....|+.++||||||+++.-+.
T Consensus 173 ---------------------------i~liDfg~~~~~~e~~a~---------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 ---------------------------LRIIDLSGKRCTAQRKAK---------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ---------------------------EEEEECCCcccccchhhH---------HHHHHHhHhcccccccceeEeehHHH
Confidence 688888876544222111 11334446778999999999986553
No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.91 E-value=4.3e-25 Score=224.09 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=177.5
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
..+|..++.|..|+||.||.++++.+.+.+|+|+=++ +. |++. | ..+ .+..+.
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq-~l----------ilRn-----i-----lt~------a~npfv 134 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ-NL----------ILRN-----I-----LTF------AGNPFV 134 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhccccc-ch----------hhhc-----c-----ccc------cCCcce
Confidence 3579999999999999999999999999999965222 11 1111 1 111 111222
Q ss_pred EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 171 v~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
| |+-...++.-+ .++.. ++.+++|||+.||+|||+||+|.+|+.-|++|++|||+.+..-.....
T Consensus 135 v-----gDc~tllk~~g--~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 135 V-----GDCATLLKNIG--PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred e-----chhhhhcccCC--CCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 2 34344444433 34433 278999999999999999999999999998888888875433211100
Q ss_pred cccCCCCCCeeEeecCCccccc-CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEH-QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAM 329 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~ 329 (411)
..+=+ ++..... ......+||+.|+|||++..+.|+..+|+|++|+|+||.+-|..||.+.+.++.+..
T Consensus 200 --------nl~eg--~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~ 269 (1205)
T KOG0606|consen 200 --------NLKEG--HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ 269 (1205)
T ss_pred --------hhhhc--chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhh
Confidence 00000 0000000 112346899999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 330 MERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 330 i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
........|+. ....+.+++++|.++|+.++..|-..- .+-++.+|.+|+.++|.+
T Consensus 270 visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~-ga~evk~h~ff~~LDw~~ 325 (1205)
T KOG0606|consen 270 VISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRLGTG-GALEVKQHGFFQLLDWKS 325 (1205)
T ss_pred hhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhcccc-hhhhhhhccceeecccch
Confidence 88888888887 566788999999999999955444433 788899999999999974
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.91 E-value=7.2e-24 Score=185.89 Aligned_cols=138 Identities=22% Similarity=0.229 Sum_probs=107.1
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchh---h------------------------hHHHHHHHHHHHHHhcCC
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---Y------------------------REAAMIEIDVLQRLARHD 149 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~------------------------~~~~~~E~~~l~~l~~~~ 149 (411)
.+.||+|+||.||+|.+. +|+.||||+++.... . ......|+.++.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999987 899999999975321 0 112345999999999988
Q ss_pred CCCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCCCCcEEE
Q 015222 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILL 227 (411)
Q Consensus 150 i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~givH~Dikp~NIli 227 (411)
+..|.++.. .+ .++||||+ |+++....... ..+++..+..++.|++.+|.++ |+.||+||||||+|||+
T Consensus 81 v~~p~~~~~------~~-~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli 151 (190)
T cd05147 81 IPCPEPILL------KS-HVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY 151 (190)
T ss_pred CCCCcEEEe------cC-CEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 755554321 12 37999999 65665443333 2689999999999999999999 79999999999999999
Q ss_pred ecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 228 VSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 228 ~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
+. + .++|+|||+|....
T Consensus 152 ~~-~---------------------------~v~LiDFG~a~~~~ 168 (190)
T cd05147 152 HD-G---------------------------KLYIIDVSQSVEHD 168 (190)
T ss_pred EC-C---------------------------cEEEEEccccccCC
Confidence 63 3 58999999887543
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89 E-value=1e-22 Score=179.15 Aligned_cols=137 Identities=20% Similarity=0.151 Sum_probs=106.0
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhh---------------------------hHHHHHHHHHHHHHhcCC
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---------------------------REAAMIEIDVLQRLARHD 149 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---------------------------~~~~~~E~~~l~~l~~~~ 149 (411)
.+.||+|+||.||+|.+. +|+.||||+++..... ......|...+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999999987 8999999999753210 122357899999999998
Q ss_pred CCCcceEEEeeeeecCCeEEEEEccC-CCCHHHH-HHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEE
Q 015222 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF-LRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENIL 226 (411)
Q Consensus 150 i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~-l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIl 226 (411)
+..|..+.. . ..++||||+ |+++... +.. ..++...+..++.|++.+|.++|+ .||+||||||+|||
T Consensus 81 i~~p~~~~~-----~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl 150 (190)
T cd05145 81 VPVPEPILL-----K--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL 150 (190)
T ss_pred CCCceEEEe-----c--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence 744443321 1 248999999 5544333 433 258889999999999999999999 99999999999999
Q ss_pred EecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 227 LVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 227 i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
++ ++ .++|+|||++....
T Consensus 151 l~-~~---------------------------~~~liDFG~a~~~~ 168 (190)
T cd05145 151 YH-DG---------------------------KPYIIDVSQAVELD 168 (190)
T ss_pred EE-CC---------------------------CEEEEEcccceecC
Confidence 97 44 67888888877543
No 418
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=2.4e-23 Score=191.26 Aligned_cols=207 Identities=21% Similarity=0.245 Sum_probs=154.1
Q ss_pred CCcceEEEeeeeec---------------------------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Q 015222 151 GGTRCVQIRNWFDY---------------------------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203 (411)
Q Consensus 151 ~~~~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi 203 (411)
.|||||.+...|.+ ...+|+||.-+..+|.+++..+. .+.....-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHH
Confidence 67888999988753 24689999999999999998865 7788889999999
Q ss_pred HHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccC---------C
Q 015222 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ---------D 274 (411)
Q Consensus 204 ~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~ 274 (411)
++|+.|||.+||.|||+|.+||||.-+. |.-..+.|+|||.+-..+. .
T Consensus 351 LEav~hL~~hgvAhRDlKSDNiL~Eldd-----------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~ 407 (598)
T KOG4158|consen 351 LEAVTHLHKHGVAHRDLKSDNILLELDD-----------------------DEIPQLVVADFGCCLADDNHGLQLPYESD 407 (598)
T ss_pred HHHHHHHHHccchhhcccccceEEEecC-----------------------CCCcEEEEcccceeeeccccccccccccc
Confidence 9999999999999999999999996543 2344678888886543222 1
Q ss_pred CcccccCCCccccceecCCC-----CC-ccchhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChhHHHhhh
Q 015222 275 HSYVVSTRHYRAPEVILGLG-----WN-YPCDLWSVGCILVELCSGEALFQTHENLE--HLAMMERVLGPLPHHMVIRAD 346 (411)
Q Consensus 275 ~~~~~gt~~y~aPE~~~~~~-----~~-~~~DiwSlGvil~elltg~~pf~~~~~~~--~~~~i~~~~~~~p~~~~~~~~ 346 (411)
.-..-|...-||||+....+ .+ .++|.|+.|.+.||+++...||.+..+.. ....-+...+.+| ..++
T Consensus 408 ~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp----~~vp 483 (598)
T KOG4158|consen 408 EVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP----SRVP 483 (598)
T ss_pred cccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc----ccCC
Confidence 12235778899999987542 12 58999999999999999999998743221 1111122233343 4467
Q ss_pred hhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 347 RRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 347 ~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
..+++++..+|+.|+++|++-+..+.-+--.+|-..-+...
T Consensus 484 p~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~vka 524 (598)
T KOG4158|consen 484 PVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGEDVKA 524 (598)
T ss_pred hHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchHHHH
Confidence 78899999999999888888888777665566665533333
No 419
>PRK10345 hypothetical protein; Provisional
Probab=99.89 E-value=4.8e-22 Score=176.02 Aligned_cols=126 Identities=21% Similarity=0.253 Sum_probs=103.3
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccc-hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC---eEE-EE
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---HIC-IV 171 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~---~~~-lv 171 (411)
.+.||+|+||.||. +..++.. +||++... ....+.+.+|+.+++.+.|.+..|+||++++++++++. .++ +|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 46899999999995 6777665 69988653 23456789999999999998888999999999998863 434 78
Q ss_pred EccC---CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHhCCceecCCCCCcEEEecC
Q 015222 172 FEKL---GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV-AFMHELRLIHTDLKPENILLVSA 230 (411)
Q Consensus 172 ~e~~---~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL-~~LH~~givH~Dikp~NIli~~~ 230 (411)
|||+ +++|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus 84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI 141 (210)
T ss_pred ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence 9994 58999999764 36665 35688888888 99999999999999999999754
No 420
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.88 E-value=6.7e-23 Score=187.46 Aligned_cols=237 Identities=19% Similarity=0.214 Sum_probs=141.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch----hhhHHHHHHHHHHHHHh----------cCCCCCc-ceEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA----------RHDIGGT-RCVQ 157 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~----------~~~i~~~-~iv~ 157 (411)
.+...+.||.|+++.||.+++..|++.+|||++.... ...+.+.+|.-....+. |-.+.-| -+++
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3567789999999999999999999999999985322 22333444432222211 1011000 1122
Q ss_pred Eee---eeecC---C-----eEEEEEccCCCCHHHHHH---hcCCC--CCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 015222 158 IRN---WFDYR---N-----HICIVFEKLGPSLYDFLR---KNSYR--SFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221 (411)
Q Consensus 158 ~~~---~~~~~---~-----~~~lv~e~~~~~L~~~l~---~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dik 221 (411)
+.+ ++... . ..+++|+-+.++|.+++. ..... .+.......+..|+++.+++||+.||||+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 211 11111 1 247888888889988865 22211 12233345566899999999999999999999
Q ss_pred CCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCC--------
Q 015222 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGL-------- 293 (411)
Q Consensus 222 p~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-------- 293 (411)
|+|++++.+| .+.|+||+.....+........+..|.+||.....
T Consensus 173 ~~nfll~~~G---------------------------~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~ 225 (288)
T PF14531_consen 173 PENFLLDQDG---------------------------GVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNA 225 (288)
T ss_dssp GGGEEE-TTS----------------------------EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred eeeEEEcCCC---------------------------CEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccc
Confidence 9999999888 56666666554433332222345779999977432
Q ss_pred CCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 294 GWNYPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 294 ~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
.++.+.|.|+||+++|.|.+|..||........... .+. ... +.++.++.+|..+|+.+ |.+|
T Consensus 226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~-~C~-~~Pe~v~~LI~~lL~~~----~~~R 288 (288)
T PF14531_consen 226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DFS-RCR-DMPEPVQFLIRGLLQRN----PEDR 288 (288)
T ss_dssp EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GGT-TSS----HHHHHHHHHHT-SS----GGGS
T ss_pred eeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cch-hcC-CcCHHHHHHHHHHccCC----cccC
Confidence 478999999999999999999999975433211110 010 011 45677889999999998 5554
No 421
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=7.7e-22 Score=171.73 Aligned_cols=182 Identities=15% Similarity=0.121 Sum_probs=133.2
Q ss_pred EEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhH-----HHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE-----AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~-----~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.+...|++|+||+||++.. .+..++.+.+........ .+.+|+++|++|.|+ +++.+++++ +..+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~----~~vP~ll~~----~~~~ 74 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGL----PRTPRLLHW----DGRH 74 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCC----CCCCEEEEE----cCEE
Confidence 3567899999999998854 677788887765544333 578999999999763 223666664 3469
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC-CCCcEEEecCcccccCCcccccccCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Di-kp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++|||+ |.+|.+.+.. . ...++.|++.+|+++|++||+|||| ||+|||++.+|
T Consensus 75 lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g---------------- 129 (218)
T PRK12274 75 LDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDG---------------- 129 (218)
T ss_pred EEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCC----------------
Confidence 999999 8888654321 1 1357789999999999999999999 79999997766
Q ss_pred CCccccCCCCCCeeEeecCCcccccCCCc----------------ccccCCCccccceecCC-CCC-ccchhHHHHHHHH
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFEHQDHS----------------YVVSTRHYRAPEVILGL-GWN-YPCDLWSVGCILV 309 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DiwSlGvil~ 309 (411)
.++|+|||++........ ....++.|++|+...-. ..+ ...+.++.|+-+|
T Consensus 130 -----------~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~ 198 (218)
T PRK12274 130 -----------SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVY 198 (218)
T ss_pred -----------CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHH
Confidence 567777777764432221 01357788888765432 334 5678999999999
Q ss_pred HHHhCCCCCCCCC
Q 015222 310 ELCSGEALFQTHE 322 (411)
Q Consensus 310 elltg~~pf~~~~ 322 (411)
.++|+..++-+..
T Consensus 199 ~~~~~~~~~~~~~ 211 (218)
T PRK12274 199 RFVTRRVLHWEDN 211 (218)
T ss_pred HHHhccCCccccC
Confidence 9999999875543
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.2e-21 Score=202.80 Aligned_cols=200 Identities=26% Similarity=0.396 Sum_probs=156.7
Q ss_pred CCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 91 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
..+|.|.+.||+|+||+||+|...+ |+.||||+-+....+.- ..-.+++.+|+ +.+ .+.+..+...+...+.-+|
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEf--YI~~q~~~RLk-~~~-~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEF--YICLQVMERLK-PQM-LPSIMHISSAHVFQNASVL 771 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceee--eehHHHHHhhc-hhh-hcchHHHHHHHccCCccee
Confidence 4579999999999999999999877 99999999876544321 11223444444 111 1223566666666788899
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGS 249 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~ 249 (411)
|+||. -|+|.+++...+ .+++..+..++.|++.-++.||..||||+||||+|.||...- ..|
T Consensus 772 v~ey~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~---~~~------------ 834 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREI---CAD------------ 834 (974)
T ss_pred eeeccccccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeeccc---CCC------------
Confidence 99999 999999999554 799999999999999999999999999999999999996532 111
Q ss_pred ccccCCCCCCeeEeecCCccccc---C--CCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC
Q 015222 250 YFKNLPKSSAIKLIDFGSTTFEH---Q--DHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL 317 (411)
Q Consensus 250 ~~~~~~~~~~~kl~Dfg~a~~~~---~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p 317 (411)
+++..++|+|||.+.... . .....++|-.+-.+|+..|.+++..+|.|.|+.+++.||.|+..
T Consensus 835 -----~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 835 -----SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred -----CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 124579999999875421 1 22345789999999999999999999999999999999998654
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.85 E-value=8.8e-21 Score=171.94 Aligned_cols=142 Identities=24% Similarity=0.182 Sum_probs=109.0
Q ss_pred CeEEEeeeccccceEEEEEE-eCCCCcEEEEEEeccchh-------------------------hhHHHHHHHHHHHHHh
Q 015222 93 RYRILSKMGEGTFGQVVECF-DNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLA 146 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~-~~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l~~l~ 146 (411)
-|++.+.||+|+||.||+|. +..+|+.||||+++.... ....+.+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999998 677899999999874321 1123568999999998
Q ss_pred cCCCCCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCc
Q 015222 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPEN 224 (411)
Q Consensus 147 ~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-ivH~Dikp~N 224 (411)
+..+.. ..++++ . ..++||||+ |.+|........ .+....+..++.||+.+|++||+.| |+||||||+|
T Consensus 109 ~~~i~~---p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPV---PKPIAW---R-RNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN 179 (237)
T ss_pred hcCCCC---CeeeEe---c-CceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence 754422 233332 2 348999999 667766543322 4666778899999999999999999 9999999999
Q ss_pred EEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccc
Q 015222 225 ILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271 (411)
Q Consensus 225 Ili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~ 271 (411)
|+++ ++ .++|+|||.+...
T Consensus 180 Ili~-~~---------------------------~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DG---------------------------KVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CC---------------------------CEEEEEChhhhcc
Confidence 9997 43 6789999987643
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2.6e-22 Score=176.00 Aligned_cols=241 Identities=16% Similarity=0.182 Sum_probs=182.8
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
...++-+|.+...|..|+|++. |..++.|+++.. ......|..|.-.|+...|||| ..+++.+....++.
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpni-----lpvlgacnsppnlv 263 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNI-----LPVLGACNSPPNLV 263 (448)
T ss_pred hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCch-----hhhhhhccCCCCce
Confidence 4556778999999999999775 455788887632 2345678889999999989888 99999999999999
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
++..|+ -|+|+..++.......+..++.+++.++++|+.|||+.. |.---|....++|+++-..
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlta------------- 330 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTA------------- 330 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhh-------------
Confidence 999999 999999999887667888999999999999999999975 4455688899999876432
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCC---ccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWN---YPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
++..+|--++... ....-.+.||+||.++..+-+ .++|+|||++++|||.|...||...+.
T Consensus 331 ------------rismad~kfsfqe----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp 394 (448)
T KOG0195|consen 331 ------------RISMADTKFSFQE----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP 394 (448)
T ss_pred ------------heecccceeeeec----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence 2333343222211 112346889999999887543 689999999999999999999999888
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHH
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVW 375 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il 375 (411)
.+.-.++.- ..+...+.+.++.....++.-|++.| |.+||.+..+.
T Consensus 395 mecgmkial--eglrv~ippgis~hm~klm~icmned----pgkrpkfdmiv 440 (448)
T KOG0195|consen 395 MECGMKIAL--EGLRVHIPPGISRHMNKLMNICMNED----PGKRPKFDMIV 440 (448)
T ss_pred hhhhhhhhh--ccccccCCCCccHHHHHHHHHHhcCC----CCcCCCcceeh
Confidence 776544431 12222333455667777888787777 88888777654
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=1.6e-21 Score=186.04 Aligned_cols=251 Identities=21% Similarity=0.245 Sum_probs=163.2
Q ss_pred CeEEEeeeccccceEEEEEEeCCC---CcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEee-------e
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRN-------W 161 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~-------~ 161 (411)
.+.+.+..+.++++.+....-... .+.++-|..+... .......+++..+....|++. ..+.+ .
T Consensus 245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~-----s~~~d~~~s~~~~ 319 (516)
T KOG1033|consen 245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNR-----SILEDLRPSLFES 319 (516)
T ss_pred cccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCc-----ccccCCCCchhhh
Confidence 455566666666666665543333 2334444333322 223334455555555555543 22222 1
Q ss_pred e-----ecCCeEEEEEccC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccc
Q 015222 162 F-----DYRNHICIVFEKL-GPSLYDFLRKN-SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234 (411)
Q Consensus 162 ~-----~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~ 234 (411)
+ ....++||.|++| ..+|.++|.+. .....+......++.|++.|++| +|.+|+|+||.||++..++.+|
T Consensus 320 ~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 320 SKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred ccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhh
Confidence 1 1134689999999 99999999743 33457778899999999999999 9999999999999988777555
Q ss_pred cCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHh-
Q 015222 235 VPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCS- 313 (411)
Q Consensus 235 l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt- 313 (411)
|.|||+......... ........+..+||..||+||++.+..|+.++||||||++|+||+.
T Consensus 397 IgDFgl~ts~~~~~~------------------~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~ 458 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDET------------------VAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQ 458 (516)
T ss_pred hhhhhheeecccCCc------------------ccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHH
Confidence 555544322222110 0000112344689999999999999999999999999999999997
Q ss_pred CCCCCCCCChHHHHHHHHH-HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCC
Q 015222 314 GEALFQTHENLEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRL 380 (411)
Q Consensus 314 g~~pf~~~~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~ 380 (411)
-...| +....... ..+.+|+.+..+.+ .-..|+..++... |..||++.+.--|.|.
T Consensus 459 f~T~~------er~~t~~d~r~g~ip~~~~~d~p-~e~~ll~~lls~~----p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 459 FSTQF------ERIATLTDIRDGIIPPEFLQDYP-EEYTLLQQLLSPS----PEERPSAIEVALHEFL 515 (516)
T ss_pred hccHH------HHHHhhhhhhcCCCChHHhhcCc-HHHHHHHHhcCCC----cccCchHHHHhhhhhc
Confidence 33333 22222222 24577766666554 3457888999888 8888887777777664
No 426
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=3.2e-19 Score=159.52 Aligned_cols=132 Identities=25% Similarity=0.307 Sum_probs=105.5
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch---------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
+.||+|++|.||+|.+ .+..|++|+..... .....+.+|+.++..+.++++..|.+ ++.+.+..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~-----~~~~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAV-----YFVDPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeE-----EEEeCCCC
Confidence 5789999999999976 66779999865321 11245678999999999988744433 33345678
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
++||||+ |++|.+++.... . ....++.+++.+|.++|+.|++|+|++|+|||++ ++
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~---------------- 131 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GG---------------- 131 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CC----------------
Confidence 8999999 889999987543 2 7889999999999999999999999999999997 33
Q ss_pred CCccccCCCCCCeeEeecCCccc
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTF 270 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~ 270 (411)
.++|+|||.+..
T Consensus 132 -----------~~~liDf~~a~~ 143 (211)
T PRK14879 132 -----------KIYLIDFGLAEF 143 (211)
T ss_pred -----------CEEEEECCcccC
Confidence 578899988764
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=1.4e-18 Score=153.94 Aligned_cols=136 Identities=25% Similarity=0.249 Sum_probs=103.5
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchh-----------------------hhHHHHHHHHHHHHHhcCCC
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-----------------------YREAAMIEIDVLQRLARHDI 150 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~E~~~l~~l~~~~i 150 (411)
|.+.+.||+|+||.||++... +|+.||||+++.... .......|..++..+.+.++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 888899999999999999875 789999998764220 11235678999999988754
Q ss_pred CCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
.- ...++ ....++||||+ |++|.+.... .....++.+++.++.++|+.||+||||||+||+++.
T Consensus 96 ~v---~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~ 160 (198)
T cd05144 96 PV---PKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD 160 (198)
T ss_pred CC---Cceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence 22 33332 23458999999 8788654321 345678899999999999999999999999999976
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
++ .++|+|||.+....
T Consensus 161 ~~---------------------------~~~liDfg~~~~~~ 176 (198)
T cd05144 161 DE---------------------------KIYIIDWPQMVSTD 176 (198)
T ss_pred CC---------------------------cEEEEECCccccCC
Confidence 55 67888888775443
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78 E-value=1.4e-18 Score=153.96 Aligned_cols=128 Identities=23% Similarity=0.252 Sum_probs=99.7
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEeccch---------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.||+|+||.||+|.. ++..|++|+..... .....+.+|+.++..+.++++..|.+ +. ...+..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~---~~--~~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVV---YD--VDPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE---EE--EECCCCE
Confidence 379999999999974 56789999864321 11255678999999999887644332 22 2345678
Q ss_pred EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCC
Q 015222 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDG 248 (411)
Q Consensus 170 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~ 248 (411)
+||||+ |++|.+++.... . .++.|++.+|.+||+.|++|+|++|+||+++ ++
T Consensus 74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~----------------- 126 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DD----------------- 126 (199)
T ss_pred EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CC-----------------
Confidence 999999 899998876532 1 7899999999999999999999999999997 44
Q ss_pred CccccCCCCCCeeEeecCCccc
Q 015222 249 SYFKNLPKSSAIKLIDFGSTTF 270 (411)
Q Consensus 249 ~~~~~~~~~~~~kl~Dfg~a~~ 270 (411)
.++++|||.+..
T Consensus 127 ----------~~~liDfg~a~~ 138 (199)
T TIGR03724 127 ----------KLYLIDFGLGKY 138 (199)
T ss_pred ----------cEEEEECCCCcC
Confidence 678889988764
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.77 E-value=6.1e-19 Score=171.46 Aligned_cols=197 Identities=18% Similarity=0.241 Sum_probs=145.3
Q ss_pred CcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCCCCcEEEec
Q 015222 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-IHTDLKPENILLVS 229 (411)
Q Consensus 152 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi-vH~Dikp~NIli~~ 229 (411)
|.|+.++++...++...++|.+|| .|+|.|.+.... ..++......++++|+.||+|||...| .|+.++..|.+++.
T Consensus 6 h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~ 84 (484)
T KOG1023|consen 6 HDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDS 84 (484)
T ss_pred hhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeee
Confidence 444599999999999999999999 999999998744 578889999999999999999998766 89999999999876
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccC-----CCcccccCCCccccceecCC---C----CCc
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-----DHSYVVSTRHYRAPEVILGL---G----WNY 297 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~----~~~ 297 (411)
.- .+||+|||+...... ......-..-|.|||.+.+. . .+.
T Consensus 85 ~w---------------------------~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~ 137 (484)
T KOG1023|consen 85 RW---------------------------VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQ 137 (484)
T ss_pred eE---------------------------EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccc
Confidence 54 667777776655432 11112234569999999874 1 467
Q ss_pred cchhHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHH-HhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHH
Q 015222 298 PCDLWSVGCILVELCSGEALFQTH----ENLEHLAMMER-VLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR 372 (411)
Q Consensus 298 ~~DiwSlGvil~elltg~~pf~~~----~~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~ 372 (411)
+.||||||++++|+++...||... +..+.+..+.+ ....+.+.+.... ++.+-+..+++.||.+.|..||+++
T Consensus 138 ~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~ 215 (484)
T KOG1023|consen 138 KGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIE 215 (484)
T ss_pred cCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHH
Confidence 899999999999999999999763 22344444444 2222222222111 3333444555667999999999999
Q ss_pred HHHhcC
Q 015222 373 AVWKLL 378 (411)
Q Consensus 373 ~il~~~ 378 (411)
++....
T Consensus 216 ~i~~~~ 221 (484)
T KOG1023|consen 216 QIRSKL 221 (484)
T ss_pred HHHhhh
Confidence 987654
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.77 E-value=7.9e-18 Score=171.04 Aligned_cols=142 Identities=23% Similarity=0.226 Sum_probs=107.0
Q ss_pred EeeCCccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEec-cc---h-----hhhHHHHHHHHHHHHHhcCCCCCcc
Q 015222 84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SI---N-----KYREAAMIEIDVLQRLARHDIGGTR 154 (411)
Q Consensus 84 ~~~~~~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~-~~---~-----~~~~~~~~E~~~l~~l~~~~i~~~~ 154 (411)
..........|...+.||+|+||+||++.+.... +++|+.. +. . ...+.+.+|+++++.+.|+++
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i---- 398 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGV---- 398 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCC----
Confidence 3334444556678899999999999999765443 4444321 11 0 123557789999999999887
Q ss_pred eEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCccc
Q 015222 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233 (411)
Q Consensus 155 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~ 233 (411)
+....+..+.+..++||||+ |++|.+++. ....++.|++.+|.+||+.||+||||||+|||++ ++
T Consensus 399 -~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~-- 464 (535)
T PRK09605 399 -PTPVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DD-- 464 (535)
T ss_pred -CeeEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CC--
Confidence 44444444556678999999 999998875 3467899999999999999999999999999993 33
Q ss_pred ccCCcccccccCCCCCccccCCCCCCeeEeecCCccc
Q 015222 234 KVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270 (411)
Q Consensus 234 ~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~ 270 (411)
.++|+|||+++.
T Consensus 465 -------------------------~~~liDFGla~~ 476 (535)
T PRK09605 465 -------------------------RLYLIDFGLGKY 476 (535)
T ss_pred -------------------------cEEEEeCccccc
Confidence 678999998875
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.74 E-value=2.1e-17 Score=144.89 Aligned_cols=135 Identities=26% Similarity=0.249 Sum_probs=94.8
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhh---hH----------------------HHHHHHHHHHHHhcCCCC
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---RE----------------------AAMIEIDVLQRLARHDIG 151 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~---~~----------------------~~~~E~~~l~~l~~~~i~ 151 (411)
.+.||+|+||+||+|.+. +++.||||+++..... .. ....|...+..+.+..+.
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999876 7899999998743211 11 113577777777665432
Q ss_pred CcceEEEeeeeecCCeEEEEEccC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEe
Q 015222 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLY-DFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV 228 (411)
Q Consensus 152 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~ 228 (411)
- .+.+.. ...++||||+ ++++. ..+.... .. ..+..++.+++.++.++|. .||+|+||||+||+++
T Consensus 81 ~---~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 81 V---PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred C---CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 2 222222 2358999999 53322 1122111 11 6678999999999999999 9999999999999997
Q ss_pred cCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccc
Q 015222 229 SAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFE 271 (411)
Q Consensus 229 ~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~ 271 (411)
++ .++|+|||.+...
T Consensus 150 -~~---------------------------~~~liDfg~a~~~ 164 (187)
T cd05119 150 -DG---------------------------KVYIIDVPQAVEI 164 (187)
T ss_pred -CC---------------------------cEEEEECcccccc
Confidence 54 5788888877643
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1.5e-19 Score=183.49 Aligned_cols=254 Identities=19% Similarity=0.236 Sum_probs=191.9
Q ss_pred CeEEEeeeccccceEEEEEEeCC-CCcEEEEEEeccch---hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecCCe
Q 015222 93 RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~~~ 167 (411)
.|.+.+.||+|+|+.|-++.... ....+|.|.+.... ...+....|..+-+.+. |.|+ +.+++...+.+.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~-----~~~~~~~~~~~~ 95 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNT-----VHMIEPSSSPRS 95 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccc-----cccCCccCCCcc
Confidence 57888889999999998887643 34567777765332 33344455777777776 5555 999999999999
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCc-ccccCCccccccc
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE-YVKVPDYKFLSRS 244 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dikp~NIli~~~~-~~~l~df~~~~~~ 244 (411)
.++++++. |+++.+.+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++..+ ..
T Consensus 96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l----------- 164 (601)
T KOG0590|consen 96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSAL----------- 164 (601)
T ss_pred cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcc-----------
Confidence 99999999 999998884222225778889999999999999999 99999999999999998776 44
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccccC-C-----Cccccc-CCCccccceecCC-CCCccchhHHHHHHHHHHHhCCC
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFEHQ-D-----HSYVVS-TRHYRAPEVILGL-GWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~-----~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwSlGvil~elltg~~ 316 (411)
++.|||+|..... . ....+| ++.|+|||...+. ...+..|+||.|+++..+++|..
T Consensus 165 ----------------~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~ 228 (601)
T KOG0590|consen 165 ----------------KIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGEL 228 (601)
T ss_pred ----------------cCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCC
Confidence 5555555543322 1 122467 9999999999985 55789999999999999999999
Q ss_pred CCCCCChHHHH-HHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 317 LFQTHENLEHL-AMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 317 pf~~~~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
|+......... .........+-...+...+....+++.+++..+ |..|.+.+++..++|+..
T Consensus 229 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~----~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 229 PWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKEN----PSNRLSIEELKLDNWLSS 291 (601)
T ss_pred CccccccccccceeecccccccccCccccCChhhhhcccccccCC----chhccccccccccccccc
Confidence 98754433211 111111122234455677788899999998866 999999999999999998
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.71 E-value=2e-16 Score=143.75 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=98.2
Q ss_pred eeec-cccceEEEEEEeCCCCcEEEEEEeccch--------------hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeee
Q 015222 98 SKMG-EGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF 162 (411)
Q Consensus 98 ~~lG-~G~~g~V~~a~~~~~~~~vavK~~~~~~--------------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~ 162 (411)
..|| .||.|+||.+... +..++||.+.... .....+.+|+.++.+|.+.++.-| ..+++.
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP---~pl~~~ 111 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVP---RPIAAR 111 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCc---eeEeee
Confidence 3566 7888888888653 6779999885311 123457789999999999886433 333332
Q ss_pred ec-CC---eEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccC
Q 015222 163 DY-RN---HICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 163 ~~-~~---~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
.. .. ..++|||++ | .+|.+++... .+++.. +.||+.+|.+||++||+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~----- 179 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDG----- 179 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC-----
Confidence 22 12 346999999 5 5899888653 356543 57899999999999999999999999997654
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCccc
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~ 270 (411)
.++|+|||.+..
T Consensus 180 ----------------------~v~LIDfg~~~~ 191 (239)
T PRK01723 180 ----------------------KFWLIDFDRGEL 191 (239)
T ss_pred ----------------------CEEEEECCCccc
Confidence 688999997764
No 434
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=2.5e-17 Score=160.31 Aligned_cols=267 Identities=19% Similarity=0.212 Sum_probs=196.4
Q ss_pred CccCCCeEEEeeecc--ccceEEEEEEe--CCCCcEEEEEEeccc---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEee
Q 015222 88 ENLTPRYRILSKMGE--GTFGQVVECFD--NEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN 160 (411)
Q Consensus 88 ~~~~~~y~i~~~lG~--G~~g~V~~a~~--~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~ 160 (411)
+.+...+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. ......-.+|+.-...+. .|.+.++.+.
T Consensus 110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~----~~~~~v~~~~ 185 (524)
T KOG0601|consen 110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKID----SHENPVRDSP 185 (524)
T ss_pred chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccC----ccccccccCc
Confidence 345567889999999 99999999998 889999999984321 112222233444433332 2455688888
Q ss_pred eeecCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHhCCceecCCCCCcEEEecC-ccccc
Q 015222 161 WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE----SVAFMHELRLIHTDLKPENILLVSA-EYVKV 235 (411)
Q Consensus 161 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~----aL~~LH~~givH~Dikp~NIli~~~-~~~~l 235 (411)
.++..+..++-+|+|+.+|..+..... ..++...++.++.+..+ ||.++|+.+++|-|+||+||++..+ ...++
T Consensus 186 ~~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 186 AWEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred ccccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeec
Confidence 899999999999999999999887654 35889999999999999 9999999999999999999999888 77777
Q ss_pred CCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCC
Q 015222 236 PDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGE 315 (411)
Q Consensus 236 ~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~ 315 (411)
+||+++. +|.|.+++...... ....|...|++||...+ -++.+.||||+|.++.+..+|.
T Consensus 265 ~df~~v~------------------~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~ 324 (524)
T KOG0601|consen 265 TDFGLVS------------------KISDGNFSSVFKVS-KRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGS 324 (524)
T ss_pred CCcceeE------------------EccCCccccceeee-ecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhc
Confidence 7777543 33333333222211 12245667999999876 7789999999999999999987
Q ss_pred CCCCCC--ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCcccccCC
Q 015222 316 ALFQTH--ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVIDLYSA 388 (411)
Q Consensus 316 ~pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~~~~~ 388 (411)
.++... +.-..+. .+.+|.++....+..+...+..|+..+ +-.|++.+.+.++.++.....+-.
T Consensus 325 ~~~~~g~~~~W~~~r-----~~~ip~e~~~~~s~~l~~~~~~~~d~~----~~~~~~~q~~~~l~~i~s~~~~~~ 390 (524)
T KOG0601|consen 325 HLPSVGKNSSWSQLR-----QGYIPLEFCEGGSSSLRSVTSQMLDED----PRLRLTAQILTALNVIHSKLFVHL 390 (524)
T ss_pred ccccCCCCCCccccc-----cccCchhhhcCcchhhhhHHHHhcCcc----hhhhhHHHHHhccccccchhhhcc
Confidence 776544 2212111 122566666566666666888888877 999999999999998886554443
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.68 E-value=4.4e-16 Score=130.83 Aligned_cols=121 Identities=25% Similarity=0.272 Sum_probs=97.5
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
+++.||.|.++.||++.... ..+++|....... ...+..|+.+++.+.+.+ .++.+++.++...+..+++|||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~---~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKG---LPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcC---CCCCeEEEEcCCCCccEEEEEec
Confidence 45789999999999998754 6799999865443 567889999999998862 23477777777778899999999
Q ss_pred -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCcEEEecCc
Q 015222 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAE 231 (411)
Q Consensus 176 -~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dikp~NIli~~~~ 231 (411)
+..+..+ +......++.+++.+|.+||.. +++|+|++|+||+++..+
T Consensus 76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~ 126 (155)
T cd05120 76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGK 126 (155)
T ss_pred CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCc
Confidence 6655443 4566677899999999999985 799999999999997644
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.62 E-value=1.3e-16 Score=162.92 Aligned_cols=296 Identities=18% Similarity=0.150 Sum_probs=207.3
Q ss_pred CCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 92 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
+.+.+.+-+-+|.++.++.+.-..+|...++|+..........-.+++.--+.+.+ ...+|.++...-.+......+|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i-~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILI-TPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccc-cCCCCceecccCCCCCCCCcchh
Confidence 45778889999999999999877778777777665433221111111110011110 01123334443334556789999
Q ss_pred EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
++|+ +++|...++..+ ..+.+-++.....+.+++++||+..++|+|++|.|+|+..+|+.+++||+..+....-...
T Consensus 883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~ 960 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPT 960 (1205)
T ss_pred hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCc
Confidence 9999 889999988766 5777888888999999999999999999999999999999999999999865544322111
Q ss_pred cccCCCCCCeeEeecCCccccc-------CCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCCh
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEH-------QDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHEN 323 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~ 323 (411)
.........+..-+++-+.... .......||+.|.+||...+......+|+|++|++++|.++|.+||.....
T Consensus 961 ~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen 961 TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence 0000000011111222111110 112346799999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHH---HHHhcCCCCcccccCCCCCchhhH
Q 015222 324 LEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMR---AVWKLLRLPVIDLYSASPNCLCKF 396 (411)
Q Consensus 324 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~---~il~~~~~~~~~~~~~~~~~~~~~ 396 (411)
......+.....+.|.. ....+.++++++.+.+..+ +.+|..+. ++-.|++|+.++|... ...+|.|
T Consensus 1041 q~~f~ni~~~~~~~p~g-~~~~s~~aq~~~~~ll~~~----~~qr~~a~~~~e~k~~~~~~~~~~~~l-~~q~~~~ 1110 (1205)
T KOG0606|consen 1041 QQIFENILNRDIPWPEG-PEEGSYEAQDLINRLLTEE----PTQRLGAKGAAEVKGHPFFQDVDWENL-ALQKAEF 1110 (1205)
T ss_pred hhhhhccccCCCCCCCC-ccccChhhhhhhhhhhccC----chhccCcccccccccCCccCCCCcccc-ccccCcc
Confidence 88888777765555543 2346778999999999888 89998888 8999999999987553 3334444
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.56 E-value=6.1e-14 Score=138.29 Aligned_cols=128 Identities=17% Similarity=0.183 Sum_probs=85.9
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchhh-----------------------------------------hHHHH
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-----------------------------------------REAAM 136 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-----------------------------------------~~~~~ 136 (411)
+.||.|++|.||+|+.+ +|+.||||+.+..-.. .-++.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 57999999999999865 6889999998642100 00234
Q ss_pred HHHHHHHHHhcCCCCCcceEEEeeee-ecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHhC
Q 015222 137 IEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE-SVAFMHEL 213 (411)
Q Consensus 137 ~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~-aL~~LH~~ 213 (411)
+|+..+.++....-.+++ +.+-.++ +.....++||||+ |++|.++...... ... ...++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~-v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPG-VYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCC-EEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhC
Confidence 566666666543222222 3333333 2234579999999 8899887654221 122 3456666665 47889999
Q ss_pred CceecCCCCCcEEEecCc
Q 015222 214 RLIHTDLKPENILLVSAE 231 (411)
Q Consensus 214 givH~Dikp~NIli~~~~ 231 (411)
|++|+|+||.||+++.+|
T Consensus 277 g~~H~D~hPgNilv~~~g 294 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDG 294 (437)
T ss_pred CceeCCCCcccEEECCCC
Confidence 999999999999997766
No 438
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.51 E-value=3.4e-13 Score=117.53 Aligned_cols=137 Identities=19% Similarity=0.223 Sum_probs=99.8
Q ss_pred eeeccccceEEEEEEeCC------CCcEEEEEEeccch-----------------------hhhHH----HHHHHHHHHH
Q 015222 98 SKMGEGTFGQVVECFDNE------KKELVAIKIVRSIN-----------------------KYREA----AMIEIDVLQR 144 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~------~~~~vavK~~~~~~-----------------------~~~~~----~~~E~~~l~~ 144 (411)
..||.|--+.||.|.... .+..+|||+++... ..... ..+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999997653 35789999985210 01122 3489999999
Q ss_pred HhcCCCCCcceEEEeeeeecCCeEEEEEccCCC-CHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HhCCceecCCC
Q 015222 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLY-DFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLK 221 (411)
Q Consensus 145 l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~-~~l~~~~~~~l~~~~~~~i~~qi~~aL~~L-H~~givH~Dik 221 (411)
+...++.-|..+ ++ ..-+|||||+++ .+. ..+... .++...+..+..+++.+|..| |+.||||+||+
T Consensus 83 l~~~Gv~vP~pi---~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVV---VL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEE---Ee----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 999887555444 32 446899999954 332 223221 356667788899999999998 89999999999
Q ss_pred CCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 222 PENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 222 p~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
+.|||+.. | .+.|+|||.+....
T Consensus 153 ~~NIL~~~-~---------------------------~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWHD-G---------------------------KVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEEC-C---------------------------cEEEEECCCceeCC
Confidence 99999963 2 57899999876543
No 439
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=5.8e-15 Score=133.44 Aligned_cols=242 Identities=17% Similarity=0.201 Sum_probs=160.1
Q ss_pred EEEEEEeCCCCcEEEEEEec----cchh-hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC-----CeEEEEEccC-
Q 015222 107 QVVECFDNEKKELVAIKIVR----SINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-----NHICIVFEKL- 175 (411)
Q Consensus 107 ~V~~a~~~~~~~~vavK~~~----~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~-----~~~~lv~e~~- 175 (411)
.||++.+...|.+|+--.++ +... ..+....-..-|.++.|.|+ ++++.|+.+. ....+++||+
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnl-----vkfH~yw~d~K~~e~~rviFiteyms 155 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNL-----VKFHKYWTDKKYEEKPRVIFITEYMS 155 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHH-----HHHHHhhcccccccccceEEEEeccc
Confidence 46777777777666544332 1111 11222223344556667766 9999888764 3578999999
Q ss_pred CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 176 GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 176 ~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g--ivH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
.|+|.++|++.. ...+....-++++.||+.||.|||+.. |+|+++..+-|++..+|.+|+..-....
T Consensus 156 sgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s--------- 226 (458)
T KOG1266|consen 156 SGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS--------- 226 (458)
T ss_pred chhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc---------
Confidence 999999998532 346888889999999999999999985 9999999999999988755442110000
Q ss_pred ccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCC-CCCCChHHHHHHH
Q 015222 252 KNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEAL-FQTHENLEHLAMM 330 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p-f~~~~~~~~~~~i 330 (411)
-...++.+ .........+-++|.|||.=..-..+.++|||+||+...||..|..- -.+.+..+.-..+
T Consensus 227 ----~h~s~~~~-------~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~i 295 (458)
T KOG1266|consen 227 ----THPSVNST-------REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENI 295 (458)
T ss_pred ----cchhhhhh-------hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhh
Confidence 00000000 00111123456789999987666778899999999999999887654 3333333333334
Q ss_pred HHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 331 ERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
.+...... ...-++++.+|++-. |..||++++++.||-+-++.
T Consensus 296 a~~i~~le-------n~lqr~~i~kcl~~e----P~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 296 ANVIIGLE-------NGLQRGSITKCLEGE----PNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred hhheeecc-------CccccCcCcccccCC----CCCCcchhhhhcCceeeecc
Confidence 33322221 223457888898888 99999999999999877665
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.50 E-value=1.7e-13 Score=117.98 Aligned_cols=114 Identities=18% Similarity=0.128 Sum_probs=84.2
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL- 175 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~- 175 (411)
++.|+.|.++.||+++.. ++.|++|+............+|+.+++.+.+.++ +.+++.+.. ...++|||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~----~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGI----GPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCC----CCceEEEeC--CCCeEEEEecC
Confidence 467899999999999764 7789999986544333456789999999987654 234444333 2347999999
Q ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----eecCCCCCcEEEe
Q 015222 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-----IHTDLKPENILLV 228 (411)
Q Consensus 176 ~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi-----vH~Dikp~NIli~ 228 (411)
|.++.+. . . ....++.+++.+|..||+.++ +|+|++|.||+++
T Consensus 75 G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~ 122 (170)
T cd05151 75 GSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD 122 (170)
T ss_pred CCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE
Confidence 7666542 0 1 123456899999999999885 9999999999997
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.49 E-value=2.7e-13 Score=135.46 Aligned_cols=130 Identities=17% Similarity=0.216 Sum_probs=84.3
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-----------------------------------hhhH----
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------------------KYRE---- 133 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----------------------------------~~~~---- 133 (411)
.|.. +.||+|++|.||+|+.+.+|+.||||+.+..- +..+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 78999999999999998889999999997431 0011
Q ss_pred --HHHHHHHHHHHHhcCCCCCcceEEEeeeeec-CCeEEEEEccC-CCCHHHHH--HhcCC--CCCCHHHHHHHHHHHHH
Q 015222 134 --AAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICIVFEKL-GPSLYDFL--RKNSY--RSFPIDLVRELGRQLLE 205 (411)
Q Consensus 134 --~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~~lv~e~~-~~~L~~~l--~~~~~--~~l~~~~~~~i~~qi~~ 205 (411)
++.+|+..+.++..... +...+.+-.++.+ ....++||||+ |+.+.++- ...+. ..+.+..+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~-~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFE-DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHcc-CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 23445555666653221 2222444343332 45678999999 88998753 22220 023334444444444
Q ss_pred HHHHHHhCCceecCCCCCcEEEecCc
Q 015222 206 SVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 206 aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
+..|++|+|+||.||+++.+|
T Consensus 277 -----f~~GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 277 -----FRDGFFHADMHPGNIFVSYDP 297 (537)
T ss_pred -----HhCCeeeCCCChHHeEEecCC
Confidence 458999999999999998765
No 442
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.38 E-value=1.3e-11 Score=103.74 Aligned_cols=145 Identities=24% Similarity=0.209 Sum_probs=110.1
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEec-c--------chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCC
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVR-S--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN 166 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~-~--------~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~ 166 (411)
.+..|-+|+-+.|+++. ..|+..+||.=- + ..-......+|+.+|.++..-.|..|.+ +|.+..
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l-----~~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRL-----IFIDTY 83 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE-----EEEecC
Confidence 56788899999999995 457777787531 1 1123456778999999998888744433 334455
Q ss_pred eEEEEEccCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCccccccc
Q 015222 167 HICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRS 244 (411)
Q Consensus 167 ~~~lv~e~~~~--~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~ 244 (411)
.-+|+|||+.| ++.+++...............++++|-..+.-||..+|||+||..+||++.++|
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~------------- 150 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG------------- 150 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC-------------
Confidence 66899999955 899999876544444444478899999999999999999999999999998876
Q ss_pred CCCCCccccCCCCCCeeEeecCCcccc
Q 015222 245 SKDGSYFKNLPKSSAIKLIDFGSTTFE 271 (411)
Q Consensus 245 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~ 271 (411)
....+.++|||++...
T Consensus 151 -----------~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 151 -----------NQITPILIDFGLSSVS 166 (229)
T ss_pred -----------CcCceEEEeecchhcc
Confidence 4456789999988653
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.37 E-value=4.2e-13 Score=131.10 Aligned_cols=249 Identities=18% Similarity=0.100 Sum_probs=168.5
Q ss_pred cCCCeEEEeeeccccceEEEEEEeC-CCCcEEEEEEeccch---hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeec
Q 015222 90 LTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY 164 (411)
Q Consensus 90 ~~~~y~i~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~ 164 (411)
...+|..+..||.|.|+.|+.+... .++..+++|.+.+.. ........|+.+...+. |.++ +.....+..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~-----~g~~~~W~~ 337 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPS-----VGKNSSWSQ 337 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccccc-----CCCCCCccc
Confidence 4467889999999999999988755 677889999875432 12222345666666654 3333 666666666
Q ss_pred CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
....|+-.||| ++++...+.-. ..+.+...+++..|++.++.++|+..++|+|+||+||++.++|
T Consensus 338 ~r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~------------ 403 (524)
T KOG0601|consen 338 LRQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG------------ 403 (524)
T ss_pred cccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch------------
Confidence 66777999999 88776665332 3688899999999999999999999999999999999998763
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCcc--ccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYR--APEVILGLGWNYPCDLWSVGCILVELCSGEALFQTH 321 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~ 321 (411)
...+++|||.............+...+. +++......+..++|++|||..+.+.++|...-...
T Consensus 404 --------------~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~ 469 (524)
T KOG0601|consen 404 --------------FFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG 469 (524)
T ss_pred --------------hhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCccc
Confidence 1346666666543222222222333344 555555667889999999999999999986543322
Q ss_pred ChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCccCCCCCCCcHHHHHHHHhcCCCCc
Q 015222 322 ENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARLDWPDGATSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 322 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~ 382 (411)
.. ...+.....+... .....+..+.+.++..+ +..|+.+.++..|.-|..
T Consensus 470 ~~---~~~i~~~~~p~~~----~~~~~~q~~~kv~~~~~----~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 470 VQ---SLTIRSGDTPNLP----GLKLQLQVLLKVMINPD----RKRRPSAVELSLHSEFYR 519 (524)
T ss_pred cc---ceeeecccccCCC----chHHhhhhhhhhhcCCc----cccchhhhhhcccchhhh
Confidence 21 1222222111111 11245667777777777 888899988888776654
No 444
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.34 E-value=8.5e-12 Score=123.26 Aligned_cols=182 Identities=17% Similarity=0.271 Sum_probs=130.2
Q ss_pred eEEEeeeccccceEEE-EEEeCCCCcEEEEEEeccchh-hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 94 YRILSKMGEGTFGQVV-ECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~-~a~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
|.+ ...+-++.+ +| .|..+.++.+|.|.+++.... ..+...+-++.|+.++||+| +++++.++.++.+|||
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~I-----l~yL~t~e~~~~~ylv 87 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNI-----LSYLDTTEEEGTLYLV 87 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchh-----hhhhhhhcccCceEEE
Confidence 444 333334433 34 466788889999999875443 34556778899999999988 9999999999999999
Q ss_pred EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 172 ~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+|-+. .|..++.+ +....+...+.||+.||.||| +.+++|++|.-+.|+|+..|..||.+|.+++..+.-+.
T Consensus 88 TErV~-Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~- 160 (690)
T KOG1243|consen 88 TERVR-PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA- 160 (690)
T ss_pred eeccc-cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-
Confidence 99883 35566665 336778888999999999998 56899999999999999999766666655433322110
Q ss_pred cccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhC
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSG 314 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 314 (411)
......--..|..|+.+.... -..|.|-|||+++|++.|
T Consensus 161 -----------------------~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 -----------------------PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred -----------------------ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 001111112356666554322 457999999999999999
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.26 E-value=4.2e-11 Score=107.57 Aligned_cols=108 Identities=17% Similarity=0.157 Sum_probs=77.2
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC---CeEEEEE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---NHICIVF 172 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~---~~~~lv~ 172 (411)
+.|+.|..+.||++.... |+.+++|+...... ....+..|+.+++.+.+.++..| +++.+.... +..++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp---~~~~~~~~~~~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVP---KVLALCEDPSVLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCC---CEEEECCCCCccCCceEEE
Confidence 678999999999998643 57899999865433 35678899999999988655334 344444332 3678999
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 212 (411)
||+ |.++.+.+.. ..+++.....++.+++.+|..||+
T Consensus 80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHS 117 (223)
T ss_pred EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhC
Confidence 999 7777665432 146677777777888888877773
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=1.2e-10 Score=98.44 Aligned_cols=130 Identities=22% Similarity=0.223 Sum_probs=93.9
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEec-cc--------hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVR-SI--------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~-~~--------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
..+++|+-+.+|.+.. -|..+++|.=- +. .-..+...+|+.++.++....+..| .+++ .+.+..
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P---~v~d--vD~~~~ 74 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVP---IVYD--VDPDNG 74 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCC---eEEE--EcCCCC
Confidence 3578899999999855 34456777532 11 1233556789999999998877333 3333 344567
Q ss_pred EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCC
Q 015222 169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKD 247 (411)
Q Consensus 169 ~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~ 247 (411)
.|+|||+ |..|.+.+.... ..++..+-.-+.-||..||||+||.++||++...
T Consensus 75 ~I~me~I~G~~lkd~l~~~~---------~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~----------------- 128 (204)
T COG3642 75 LIVMEYIEGELLKDALEEAR---------PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG----------------- 128 (204)
T ss_pred EEEEEEeCChhHHHHHHhcc---------hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-----------------
Confidence 8999999 667777887641 3455666666778999999999999999999654
Q ss_pred CCccccCCCCCCeeEeecCCcccc
Q 015222 248 GSYFKNLPKSSAIKLIDFGSTTFE 271 (411)
Q Consensus 248 ~~~~~~~~~~~~~kl~Dfg~a~~~ 271 (411)
.+.++|||++...
T Consensus 129 -----------~i~~IDfGLg~~s 141 (204)
T COG3642 129 -----------RIYFIDFGLGEFS 141 (204)
T ss_pred -----------cEEEEECCccccc
Confidence 4899999998743
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.18 E-value=1.3e-09 Score=100.37 Aligned_cols=140 Identities=18% Similarity=0.051 Sum_probs=98.2
Q ss_pred EEEEEeCCCCcEEEEEEeccchh------------hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCeEEEEEc
Q 015222 108 VVECFDNEKKELVAIKIVRSINK------------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVFE 173 (411)
Q Consensus 108 V~~a~~~~~~~~vavK~~~~~~~------------~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~e 173 (411)
|+++.. .|+.|.||....... ....+.+|...+.++...+|..|..|-+...-.. ...-++|||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 555532 466788886643221 1124789999999999999877765554321111 235789999
Q ss_pred cC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCcc
Q 015222 174 KL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYF 251 (411)
Q Consensus 174 ~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~ 251 (411)
++ +. +|.+++........+......++.+++..+.-||..||+|+|+++.|||++.+...
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~------------------ 177 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPG------------------ 177 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccC------------------
Confidence 99 43 79999864322346677888999999999999999999999999999999752000
Q ss_pred ccCCCCCCeeEeecCCcc
Q 015222 252 KNLPKSSAIKLIDFGSTT 269 (411)
Q Consensus 252 ~~~~~~~~~kl~Dfg~a~ 269 (411)
.++...+.|+||+.+.
T Consensus 178 --~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 178 --REEDLKLSVIDLHRAQ 193 (268)
T ss_pred --CCCCceEEEEECCccc
Confidence 0123478999999765
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.13 E-value=1.8e-10 Score=100.09 Aligned_cols=127 Identities=28% Similarity=0.336 Sum_probs=81.5
Q ss_pred EEEEEEeCCCCcEEEEEEeccch---------------------------hhhHHHHHHHHHHHHHhcCCCCCcceEEEe
Q 015222 107 QVVECFDNEKKELVAIKIVRSIN---------------------------KYREAAMIEIDVLQRLARHDIGGTRCVQIR 159 (411)
Q Consensus 107 ~V~~a~~~~~~~~vavK~~~~~~---------------------------~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~ 159 (411)
.||.|.. ..|..+|||+.+... .......+|...|.++...++.-| +++
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP---~p~ 76 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVP---KPY 76 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS-----EE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCC---cEE
Confidence 3888876 456789999985210 112446789999999988876444 333
Q ss_pred eeeecCCeEEEEEccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHhCCceecCCCCCcEEEecCcccccC
Q 015222 160 NWFDYRNHICIVFEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF-MHELRLIHTDLKPENILLVSAEYVKVP 236 (411)
Q Consensus 160 ~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~-LH~~givH~Dikp~NIli~~~~~~~l~ 236 (411)
++. .-+|||||++ |.....+.... ++.+....++.+++..+.. +|+.||+|+||.+.|||++.+
T Consensus 77 ~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~------ 143 (188)
T PF01163_consen 77 DYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG------ 143 (188)
T ss_dssp EEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT------
T ss_pred EEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc------
Confidence 332 2369999996 64444444332 2245567788888886555 679999999999999999754
Q ss_pred CcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 237 DYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 237 df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
.+.|+|||.+....
T Consensus 144 ----------------------~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 144 ----------------------KVYIIDFGQAVDSS 157 (188)
T ss_dssp ----------------------CEEE--GTTEEETT
T ss_pred ----------------------eEEEEecCcceecC
Confidence 58899999876543
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.08 E-value=1.7e-11 Score=121.53 Aligned_cols=167 Identities=14% Similarity=0.258 Sum_probs=118.3
Q ss_pred HHHHHHHHHHhC-CceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCCccccc
Q 015222 202 QLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVS 280 (411)
Q Consensus 202 qi~~aL~~LH~~-givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g 280 (411)
+++.||.|+|.. ++||++|.|++|.++..|.+|++.|+++........ .-...-|+++... ..-
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~--------~p~~~yd~~lp~~-------~~~ 171 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTE--------YPFSEYDPPLPLL-------LQP 171 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCc--------cccccCCCCCChh-------hcc
Confidence 344999999965 899999999999999999888777776543332221 1122233333221 223
Q ss_pred CCCccccceecCCCCCccchhHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhhhhhhhhhccCCcc
Q 015222 281 TRHYRAPEVILGLGWNYPCDLWSVGCILVELC-SGEALFQTHENLEHLAMMERVLGPLPHHMVIRADRRAEKYFRRGARL 359 (411)
Q Consensus 281 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell-tg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~li~~~l~~ 359 (411)
...|.|||.+.+...+.++|+|||||++|.+. .|+..+...........-......--.....+++.++++-+.+++..
T Consensus 172 ~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 172 HLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred CcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcC
Confidence 55799999999988899999999999999999 57777766544333322222222222233456778899999999999
Q ss_pred CCCCCCCcHHHHHHHHhcCCCCcccccC
Q 015222 360 DWPDGATSRDSMRAVWKLLRLPVIDLYS 387 (411)
Q Consensus 360 ~~~~rp~~R~t~~~il~~~~~~~~~~~~ 387 (411)
+ ...||++.+++..+||.+.....
T Consensus 252 ~----~~~rp~~~~l~~~~ff~D~~~~a 275 (700)
T KOG2137|consen 252 D----SAVRPTLDLLLSIPFFSDPGLKA 275 (700)
T ss_pred C----cccCcchhhhhcccccCCchhhh
Confidence 9 88999999999999999865443
No 450
>PRK09902 hypothetical protein; Provisional
Probab=98.96 E-value=3.7e-08 Score=86.21 Aligned_cols=128 Identities=13% Similarity=0.118 Sum_probs=96.6
Q ss_pred ccccceEEEEEEeCCCCcEEEEEEecc----c---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec--CCeEEEE
Q 015222 101 GEGTFGQVVECFDNEKKELVAIKIVRS----I---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIV 171 (411)
Q Consensus 101 G~G~~g~V~~a~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv 171 (411)
|+||.+-|+..... |+.+=+|.-.. . ......+.+|+..|++|...++.-|.++ ..+.-.. .-..+||
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 67888999887543 33577776531 0 2356778999999999999988655544 2222211 2357899
Q ss_pred EccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 172 FEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 172 ~e~~~--~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
+|-++ .+|.+++........+......++.+++..+.-||+.|+.|+|+-+.|||++.+|
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g 165 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG 165 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC
Confidence 99885 6999998775534567888889999999999999999999999999999997544
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.93 E-value=3.5e-08 Score=95.27 Aligned_cols=167 Identities=18% Similarity=0.255 Sum_probs=123.8
Q ss_pred cceEEEEEEeCCCCcEEEEEEeccch-hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec----CCeEEEEEccC--C
Q 015222 104 TFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHICIVFEKL--G 176 (411)
Q Consensus 104 ~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~----~~~~~lv~e~~--~ 176 (411)
.-.+.|++....+|..|++|.+.-.. ........-+++++++.|.|+ |++.++|.. +..+++|++|. .
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~Nv-----V~frevf~t~tF~D~SlvlvYDYyP~s 362 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNV-----VPFREVFLTYTFGDLSLVLVYDYYPSS 362 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCce-----eehhhhhhhhccCcceEEEEEecCCCC
Confidence 34578999999999999999994222 112233445788999999887 999998873 45799999998 6
Q ss_pred CCHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccc
Q 015222 177 PSLYDFLRKN-------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSR 243 (411)
Q Consensus 177 ~~L~~~l~~~-------------~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~ 243 (411)
++|.++.-.. .+.+.++..+|.++.||..||.++|+.|+.-+-|.|.+||++.+.
T Consensus 363 ~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~------------ 430 (655)
T KOG3741|consen 363 PTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKM------------ 430 (655)
T ss_pred chHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcc------------
Confidence 6888875321 124578899999999999999999999999999999999986543
Q ss_pred cCCCCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCC
Q 015222 244 SSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEA 316 (411)
Q Consensus 244 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~ 316 (411)
+++|..-|.......+.. |.+.+ -.+-|.=.||.+++.|.||..
T Consensus 431 ---------------RIriS~C~i~Dvl~~d~~-----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 431 ---------------RIRISGCGIMDVLQEDPT-----------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred ---------------eEEEecccceeeecCCCC-----------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 566666665544332220 11111 245688999999999999854
No 452
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.92 E-value=1.7e-08 Score=89.81 Aligned_cols=113 Identities=29% Similarity=0.328 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcceEEEeeeeec-CCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 015222 132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208 (411)
Q Consensus 132 ~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~-~~~~~lv~e~~-~-~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~ 208 (411)
.....+|...+..|...+|.-|..+-+...-.. ....++|+|++ + .+|.+++.... ..+......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence 456788999999999999876665554332111 13568999999 4 37999988754 3667788899999999999
Q ss_pred HHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccc
Q 015222 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTF 270 (411)
Q Consensus 209 ~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~ 270 (411)
-||+.||+|+|+++.|||++.++ +...+.|+||+-+..
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~------------------------~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDD------------------------GQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCC------------------------CceeEEEEcchhcee
Confidence 99999999999999999998754 234678888886653
No 453
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.87 E-value=2.6e-08 Score=89.38 Aligned_cols=123 Identities=28% Similarity=0.293 Sum_probs=89.1
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccc-----------------------hhhhHHHHHHHHHHHHHhcCCC
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----------------------NKYREAAMIEIDVLQRLARHDI 150 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~-----------------------~~~~~~~~~E~~~l~~l~~~~i 150 (411)
+.+..+||-|--|.||.|.+. .|.++|||.=+-. ...+..+++|.++|++|...+.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999876 6778999975310 0134557889999999976633
Q ss_pred CCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
.- .+.++ -+...+|||++ |..|... ++..+.+..++..|+.-+.-+-..||||+|+.+=||+++.
T Consensus 172 ~V---P~P~~----~nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 172 KV---PKPIA----WNRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CC---CCccc----cccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence 11 23222 35678999999 6555432 2234556666777777777666899999999999999988
Q ss_pred Cc
Q 015222 230 AE 231 (411)
Q Consensus 230 ~~ 231 (411)
+|
T Consensus 238 dg 239 (304)
T COG0478 238 DG 239 (304)
T ss_pred CC
Confidence 77
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.75 E-value=1.7e-07 Score=82.49 Aligned_cols=131 Identities=17% Similarity=0.230 Sum_probs=87.4
Q ss_pred ccCCCeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhh----------HHHHHHHHHHHHHhcCCCCCcc---e
Q 015222 89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----------EAAMIEIDVLQRLARHDIGGTR---C 155 (411)
Q Consensus 89 ~~~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~----------~~~~~E~~~l~~l~~~~i~~~~---i 155 (411)
.+.++|.+.+.+-......|.+.. -.|+.+++|..+...... ....+++..+.++...+...++ +
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 457889999999888888887764 456789999986432111 2234455556666555443221 2
Q ss_pred EEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 156 v~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
+...-.+......+++|||+ |..|.++.. +++ .+...|.+++.-||+.|+.|+|..|.|++++.++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~ 172 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG 172 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc
Confidence 22222233345678999999 777766532 333 2446677889999999999999999999997553
No 455
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.72 E-value=5.7e-08 Score=91.65 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=121.3
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHH-hcCCCCCcceEEEee--eeec-CCeEEEEE
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN--WFDY-RNHICIVF 172 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~iv~~~~--~~~~-~~~~~lv~ 172 (411)
...||+|+-+.+|-.-.. ...+-|++....-..+.- -+..|... .|+.+. ..++--.. +.-+ +..+.+.|
T Consensus 16 gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~aq--k~a~la~~p~~p~~~-~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQAQ--KVAELAATPDAPLLN-YRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CccccCCccceeeecchh---hchhheeecCCCchHHHH--HHHHhccCCCCcchh-hhhcccHHHhhCCCccceeEEec
Confidence 357899999999965322 224568876433221111 11112111 122110 00110000 0111 23478899
Q ss_pred ccC-CC-CHHHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCC
Q 015222 173 EKL-GP-SLYDFLR----KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSK 246 (411)
Q Consensus 173 e~~-~~-~L~~~l~----~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~ 246 (411)
..+ |. .+.+++. ++......+....++++.|+.+...||..|.+-+|+.++|+|+++++.+.|.|-.
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsD------- 162 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSD------- 162 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEccc-------
Confidence 988 43 4444443 3334457889999999999999999999999999999999999998866655421
Q ss_pred CCCccccCCCCCCeeEeecCCcccccCCCcccccCCCccccceec-----CCCCCccchhHHHHHHHHHHHhC-CCCCCC
Q 015222 247 DGSYFKNLPKSSAIKLIDFGSTTFEHQDHSYVVSTRHYRAPEVIL-----GLGWNYPCDLWSVGCILVELCSG-EALFQT 320 (411)
Q Consensus 247 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwSlGvil~elltg-~~pf~~ 320 (411)
...|+|-|.- ....+|...|.+||.-. +..-+...|.|.|||++|+|+.| +.||.+
T Consensus 163 ------------sfqi~~ng~~------~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 163 ------------SFQINANGTL------HLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred ------------ceeeccCCce------EecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 1222222211 12247888999999765 33456789999999999999985 999976
Q ss_pred C
Q 015222 321 H 321 (411)
Q Consensus 321 ~ 321 (411)
.
T Consensus 225 I 225 (637)
T COG4248 225 I 225 (637)
T ss_pred c
Confidence 3
No 456
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.70 E-value=2.8e-07 Score=81.95 Aligned_cols=136 Identities=19% Similarity=0.161 Sum_probs=95.0
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchh-------------------------hhHHHHHHHHHHHHHhcCCCCC
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLARHDIGG 152 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~E~~~l~~l~~~~i~~ 152 (411)
..|..|--+.||+|.. .++..||+|+++.... ......+|..-|+++...++..
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3556677778999974 5678899999863211 1122357999999998877633
Q ss_pred cceEEEeeeeecCCeEEEEEccCCCC--HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCcEEEec
Q 015222 153 TRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVS 229 (411)
Q Consensus 153 ~~iv~~~~~~~~~~~~~lv~e~~~~~--L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~givH~Dikp~NIli~~ 229 (411)
.+.+.+. .-.|||||+|.. -.-.|..- .+..+++..+..++++.+.-|-. .|+||+||..=|||+.
T Consensus 133 ---P~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~- 201 (268)
T COG1718 133 ---PEPIAFR----NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH- 201 (268)
T ss_pred ---CCceeec----CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-
Confidence 3333332 347999999544 11122221 24444788889999999988887 8999999999999997
Q ss_pred CcccccCCcccccccCCCCCccccCCCCCCeeEeecCCccccc
Q 015222 230 AEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 230 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
+| .+.++|||.|....
T Consensus 202 ~~---------------------------~p~iID~~QaV~~~ 217 (268)
T COG1718 202 DG---------------------------EPYIIDVSQAVTID 217 (268)
T ss_pred CC---------------------------eEEEEECccccccC
Confidence 33 68999999887554
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.68 E-value=4.2e-07 Score=82.02 Aligned_cols=82 Identities=21% Similarity=0.268 Sum_probs=59.3
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL- 175 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~- 175 (411)
++.|+.|..+.||++.... ..+++|+.... .....+..|..+++.+....+..|.++............+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4788999999999998765 47999998665 5567788999999999988763344333222223345689999999
Q ss_pred CCCHHH
Q 015222 176 GPSLYD 181 (411)
Q Consensus 176 ~~~L~~ 181 (411)
|..+..
T Consensus 79 g~~~~~ 84 (239)
T PF01636_consen 79 GRPLDD 84 (239)
T ss_dssp SEEHHH
T ss_pred cccccc
Confidence 777766
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.65 E-value=2.1e-07 Score=92.90 Aligned_cols=136 Identities=18% Similarity=0.225 Sum_probs=85.0
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchh-----------------------------------h------hHHHH
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-----------------------------------Y------REAAM 136 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-----------------------------------~------~~~~~ 136 (411)
+.|+.++-|.||+|+.+. |+.||||+.+..-. . .-++.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 578999999999999765 89999999753110 0 01134
Q ss_pred HHHHHHHHHhcCCCCCcceEEEeeee-ecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH-HHHHHhC
Q 015222 137 IEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES-VAFMHEL 213 (411)
Q Consensus 137 ~E~~~l~~l~~~~i~~~~iv~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~a-L~~LH~~ 213 (411)
+|..-+.++.+..-..+. +++-.++ +..+.-.++|||+ |..+.+...-.. ..++...+. ..++++ +..+-..
T Consensus 210 ~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia---~~~~~~f~~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPD-VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELA---ELLVRAFLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCC-eEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHH---HHHHHHHHHHHHhc
Confidence 566666676654333333 3333333 3456678999999 778888743222 235533332 222222 3344458
Q ss_pred CceecCCCCCcEEEecCcccccCCcc
Q 015222 214 RLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 214 givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
|+.|.|.+|.||++..+|.+.+.|||
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfG 310 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFG 310 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCc
Confidence 99999999999999988744333333
No 459
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.54 E-value=3.7e-06 Score=73.74 Aligned_cols=124 Identities=17% Similarity=0.305 Sum_probs=94.8
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch-----------------hhhHHHHHHHHHHHHHh-cCCCCCcceEEEe
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------KYREAAMIEIDVLQRLA-RHDIGGTRCVQIR 159 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----------------~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~ 159 (411)
..||+|+.-.||.- .. .....||+++... .......+|+.....+. ..++.+.++.+++
T Consensus 7 ~~i~~G~~R~cy~H--P~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--PD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--CC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 47899999999954 33 3347899987544 23466778999888888 8888888999999
Q ss_pred eeeecCCeEEEEEccC-C------CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCc
Q 015222 160 NWFDYRNHICIVFEKL-G------PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 160 ~~~~~~~~~~lv~e~~-~------~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~ 231 (411)
++.+++.-..+|+|.+ . .+|.+++.... ++. .... .+-.-.+||-+.+|+.+|++|.||++...+
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~ 155 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRD 155 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence 9999998889999975 2 37888886653 655 3333 333334688899999999999999998754
No 460
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.54 E-value=7e-09 Score=102.30 Aligned_cols=243 Identities=14% Similarity=0.029 Sum_probs=159.6
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
.|...+.+++|+++.+++.+...+...+ .+++... ....-++++|.+++|||. .+..++.++.+.+.+++|
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~~----~v~~~~d~~~E~~~~i~~ 313 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPNP----VVRYLEDYDGEDYLWIPM 313 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCCC----cccccccCCcccccchhh
Confidence 4556677899999999999877666555 7776543 345558899999999982 267777777788999999
Q ss_pred ccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEecCcccccCCcccccccCCCCCc
Q 015222 173 EKL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 173 e~~-~~-~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
+++ ++ +......... ..+.+.+...+.+.-.++|++||+.-=+|+| ||+..+
T Consensus 314 ~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~--------------------- 367 (829)
T KOG0576|consen 314 RICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE--------------------- 367 (829)
T ss_pred hhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----cccccc---------------------
Confidence 999 44 2222111111 1244455566677778899999998878998 887544
Q ss_pred cccCCCCCCeeEeecCCcccccCC--CcccccCCCccccceecCCCCCccchhHHHHHHHHHHHhCCCCCCCCChHHHHH
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEHQD--HSYVVSTRHYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALFQTHENLEHLA 328 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf~~~~~~~~~~ 328 (411)
...++.||+........ ..+..+|+.++|||+...+.+....|.||+|+--.++.-|.+|-... .....
T Consensus 368 -------~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~ 438 (829)
T KOG0576|consen 368 -------EEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLP 438 (829)
T ss_pred -------cccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCC--ccccC
Confidence 25688888877665544 55678999999999999999999999999999877887777765331 00000
Q ss_pred HHHHHhCCCChhHH-Hhhhhhh-hhhhccCCccCCCCCCCcHHHHHHHHhcCCCCccc
Q 015222 329 MMERVLGPLPHHMV-IRADRRA-EKYFRRGARLDWPDGATSRDSMRAVWKLLRLPVID 384 (411)
Q Consensus 329 ~i~~~~~~~p~~~~-~~~~~~~-~~li~~~l~~~~~~rp~~R~t~~~il~~~~~~~~~ 384 (411)
.+..... .+.-.. ..++... .++...|+..- |..++....++.+.+|....
T Consensus 439 ~~g~~p~-s~~L~~~~aw~~~~~~~~~~~~~~g~----P~~pkv~mgacfsKvfngCp 491 (829)
T KOG0576|consen 439 MIGNGPN-SPMLTDKSAWSPVFHRDFPAPCLNGL----PPTPKVHMGACFSKVFNGCP 491 (829)
T ss_pred CCCCCCC-ccccchhhhcCcccccCCcccccCCC----CCCCcchhhHHHHHHhccCc
Confidence 0000000 000000 0011111 13555555555 77777777787777776543
No 461
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.51 E-value=1.7e-06 Score=77.92 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=52.9
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-C
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G 176 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~ 176 (411)
..||.|..+.||+. .+..+++|+..... ......+|.++++.+...++..| +.+.+.+..+...+|||++ |
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~glpvP---~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLGIPTP---HPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcCCCCC---ceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 24457899986533 34557889999999987666444 4455556667788999999 5
Q ss_pred C
Q 015222 177 P 177 (411)
Q Consensus 177 ~ 177 (411)
.
T Consensus 79 ~ 79 (226)
T TIGR02172 79 K 79 (226)
T ss_pred c
Confidence 4
No 462
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.47 E-value=3.8e-06 Score=73.11 Aligned_cols=118 Identities=21% Similarity=0.289 Sum_probs=85.8
Q ss_pred CCeEEEeeeccccc-eEEEEEEeCCCCcEEEEEEecc----c--------h----------hhhHHHHHHHHHHHHHhcC
Q 015222 92 PRYRILSKMGEGTF-GQVVECFDNEKKELVAIKIVRS----I--------N----------KYREAAMIEIDVLQRLARH 148 (411)
Q Consensus 92 ~~y~i~~~lG~G~~-g~V~~a~~~~~~~~vavK~~~~----~--------~----------~~~~~~~~E~~~l~~l~~~ 148 (411)
.+++.++.||.|.. |.||+++. .|+.+|||+++. . . .....+..|.+...+|+..
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 57899999999999 99999965 577999999431 0 0 1234577899999999877
Q ss_pred CCCCcceEEEeeeeecC------------------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 015222 149 DIGGTRCVQIRNWFDYR------------------NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209 (411)
Q Consensus 149 ~i~~~~iv~~~~~~~~~------------------~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~ 209 (411)
+-.+.-.++.++|..-. ....||.||. ... .++... +.+|++-|..
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~~----~~~~~~dl~~ 179 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIRD----IPQMLRDLKI 179 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchhH----HHHHHHHHHH
Confidence 55333358888887321 1346788876 322 133333 4567778889
Q ss_pred HHhCCceecCCCCCcEE
Q 015222 210 MHELRLIHTDLKPENIL 226 (411)
Q Consensus 210 LH~~givH~Dikp~NIl 226 (411)
+|..||+-+|+|+.|..
T Consensus 180 ~~k~gI~~~Dv~~~ny~ 196 (207)
T PF13095_consen 180 LHKLGIVPRDVKPRNYR 196 (207)
T ss_pred HHHCCeeeccCcccccc
Confidence 99999999999999987
No 463
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.37 E-value=4e-06 Score=70.71 Aligned_cols=133 Identities=24% Similarity=0.269 Sum_probs=89.9
Q ss_pred CeEEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEE
Q 015222 93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF 172 (411)
Q Consensus 93 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~ 172 (411)
.-++.+.||+|++|.||++.+. |..+|+|+-+. +..+..++.|+++|..+.-.++ ..+++.+-. .++.|
T Consensus 23 ~~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~~----~p~vy~yg~----~~i~m 91 (201)
T COG2112 23 ELRVEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEGV----TPEVYFYGE----DFIRM 91 (201)
T ss_pred hhhhhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcCC----CceEEEech----hhhhh
Confidence 3456789999999999999764 56899998653 4556788999999999987765 134444433 34559
Q ss_pred ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC-CCcEEEecCcccccCCcccccccCCCCCc
Q 015222 173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK-PENILLVSAEYVKVPDYKFLSRSSKDGSY 250 (411)
Q Consensus 173 e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dik-p~NIli~~~~~~~l~df~~~~~~~~~~~~ 250 (411)
||+ |..|.+.-... . ++-...++.+-.-|-..||-|+.|. |..++|..++
T Consensus 92 e~i~G~~L~~~~~~~-----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~------------------- 143 (201)
T COG2112 92 EYIDGRPLGKLEIGG-----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDR------------------- 143 (201)
T ss_pred hhhcCcchhhhhhcc-----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCC-------------------
Confidence 999 76887654321 1 2223445555455667899999886 4444443322
Q ss_pred cccCCCCCCeeEeecCCccccc
Q 015222 251 FKNLPKSSAIKLIDFGSTTFEH 272 (411)
Q Consensus 251 ~~~~~~~~~~kl~Dfg~a~~~~ 272 (411)
.+.|+||..|+...
T Consensus 144 --------~~~iIDFd~At~k~ 157 (201)
T COG2112 144 --------DVYIIDFDSATFKK 157 (201)
T ss_pred --------cEEEEEccchhhcc
Confidence 67899999887443
No 464
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.26 E-value=1.4e-05 Score=73.03 Aligned_cols=75 Identities=15% Similarity=0.092 Sum_probs=51.6
Q ss_pred eeccccc-eEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-C
Q 015222 99 KMGEGTF-GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G 176 (411)
Q Consensus 99 ~lG~G~~-g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~ 176 (411)
.|-.|.+ +.||++... +..+.||+..... .....+|+.+++.+... +. +.+++.+....+..++|||++ |
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-~~---vP~v~~~~~~~~~~~lv~e~i~G 76 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-LP---VPEVIDYGSDDGRAWLLTSAVPG 76 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-CC---CCeEEEEEecCCccEEEEEeeCC
Confidence 4445555 789998653 3578899875433 34567899999999755 43 345666666556789999999 7
Q ss_pred CCHHH
Q 015222 177 PSLYD 181 (411)
Q Consensus 177 ~~L~~ 181 (411)
.+|.+
T Consensus 77 ~~l~~ 81 (244)
T cd05150 77 VPAAA 81 (244)
T ss_pred ccHhH
Confidence 66653
No 465
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.23 E-value=9.9e-06 Score=73.55 Aligned_cols=76 Identities=14% Similarity=0.073 Sum_probs=46.6
Q ss_pred eeeccccce-EEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcC-CCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 98 SKMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 98 ~~lG~G~~g-~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
+.|+.|+.. .||+.. ..+++|+... ......+.+|.+++..+... .+..|.++..-..-+.....+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 567767666 599762 2477888654 23345788999999999753 444444333211111123458899998
Q ss_pred -CCCH
Q 015222 176 -GPSL 179 (411)
Q Consensus 176 -~~~L 179 (411)
|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 6555
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.17 E-value=2.4e-05 Score=83.96 Aligned_cols=78 Identities=15% Similarity=0.126 Sum_probs=53.6
Q ss_pred EeeeccccceEEEEEEeCCCC--cEEEEEEeccch--hhhHHHHHHHHHHHHHh-cCCCCCcceEEEeeeeecC---CeE
Q 015222 97 LSKMGEGTFGQVVECFDNEKK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR---NHI 168 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~--~~vavK~~~~~~--~~~~~~~~E~~~l~~l~-~~~i~~~~iv~~~~~~~~~---~~~ 168 (411)
++.++.|.++.+|+......+ ..+++|+..... .....+.+|+.+++.+. |.++..| +++.++.+. +..
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP---~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVP---KVYCLCTDASVIGTA 119 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCC---cEEEEecCCCcCCCc
Confidence 577899999999998765432 357788764322 22356789999999997 5666444 444444442 467
Q ss_pred EEEEccC-CC
Q 015222 169 CIVFEKL-GP 177 (411)
Q Consensus 169 ~lv~e~~-~~ 177 (411)
|+|||++ |.
T Consensus 120 flVME~v~G~ 129 (822)
T PLN02876 120 FYIMEYLEGR 129 (822)
T ss_pred eEEEEecCCc
Confidence 8999999 54
No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.09 E-value=5.4e-05 Score=68.59 Aligned_cols=75 Identities=15% Similarity=0.329 Sum_probs=49.9
Q ss_pred EeeeccccceEEEEEEeCC-CCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC
Q 015222 97 LSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~ 175 (411)
++.|..|-...+|++.... .++.|++|+............+|+.+++.+...++ . .+++..+.. .++|||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl-~---P~v~~~~~~----~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL-A---PKLYATFQN----GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC-C---CeEEEEeCC----cEEEEee
Confidence 4677788888999996543 35679999876433322344579999999987765 2 334433321 3799999
Q ss_pred -CCCH
Q 015222 176 -GPSL 179 (411)
Q Consensus 176 -~~~L 179 (411)
|.++
T Consensus 75 ~G~~l 79 (235)
T cd05157 75 PGRTL 79 (235)
T ss_pred CCCcC
Confidence 6554
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.08 E-value=3.6e-05 Score=76.89 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=88.4
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccch--------------------------------hhhH------HHHHHH
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------------------------------KYRE------AAMIEI 139 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--------------------------------~~~~------~~~~E~ 139 (411)
+.||.-+.|.||+|+.+. |+.||||+-+..- +..+ ++.+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 579999999999999776 9999999965311 0011 123344
Q ss_pred HHHHHH----hcCCCCCcceEEEeeeee-cCCeEEEEEccC-CCCHHH--HHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015222 140 DVLQRL----ARHDIGGTRCVQIRNWFD-YRNHICIVFEKL-GPSLYD--FLRKNSYRSFPIDLVRELGRQLLESVAFMH 211 (411)
Q Consensus 140 ~~l~~l----~~~~i~~~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~--~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH 211 (411)
+-..+. .|-+. ..-|.+-.++. ....-.|+|||+ |..+.| .+.+.+ ++...+..-+.+.. ++-+-
T Consensus 246 ~Nae~~~~~f~~~~~--~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~--~~qIf 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSL--LTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAY--LEQIF 318 (538)
T ss_pred HhHHHHHHHHHhccc--ccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHH--HHHHH
Confidence 333333 33221 01122333322 234678999999 765544 455544 66664444333332 23344
Q ss_pred hCCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCC
Q 015222 212 ELRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQD 274 (411)
Q Consensus 212 ~~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~ 274 (411)
..|++|+|=+|.||++..++ ..+..+.+-|||+.......
T Consensus 319 ~~GffHaDPHPGNilv~~~~-----------------------~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNP-----------------------EGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred hcCCccCCCCCCcEEEecCC-----------------------CCCccEEEEcccccccccHH
Confidence 57899999999999998542 13457899999987765443
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.98 E-value=0.00022 Score=69.38 Aligned_cols=75 Identities=20% Similarity=0.217 Sum_probs=52.0
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccc--------hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeE
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI 168 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~--------~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~ 168 (411)
.+.||.|.+..||++.+...++.|+||.-... ....+....|.+.|+.+.... ..++.+++.+ +.+..
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~--p~~VPkV~~~--D~~~~ 106 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYV--PDLVPKVYHY--DEELA 106 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhC--CCCCCeEEEE--CCCCC
Confidence 46899999999999998655468999984311 123456777888998875421 1234566655 33567
Q ss_pred EEEEccC
Q 015222 169 CIVFEKL 175 (411)
Q Consensus 169 ~lv~e~~ 175 (411)
++|||++
T Consensus 107 ~lVME~L 113 (401)
T PRK09550 107 VTVMEDL 113 (401)
T ss_pred EEEEecC
Confidence 8999999
No 470
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.91 E-value=0.00012 Score=68.91 Aligned_cols=79 Identities=14% Similarity=0.123 Sum_probs=52.3
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee---eeecCCeEEEEEc
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFE 173 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e 173 (411)
++.|..|....+|+... .+..+++|+... ........|+.++..+.+.++.-+.++...+ +....+..++|++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 56777788789998854 234689999865 3345677899999999877664333332211 1233456789999
Q ss_pred cC-CCCH
Q 015222 174 KL-GPSL 179 (411)
Q Consensus 174 ~~-~~~L 179 (411)
++ |..+
T Consensus 95 ~i~G~~~ 101 (296)
T cd05153 95 FLAGEHL 101 (296)
T ss_pred eCCCCCC
Confidence 99 6543
No 471
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.80 E-value=0.00023 Score=67.15 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=49.9
Q ss_pred EeeeccccceEEEEEEeCC------CCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 97 LSKMGEGTFGQVVECFDNE------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~------~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
++.|..|-...||++.... .++.+++|+............+|..+++.+...++ . .+++..+.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-~---P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-G---PKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-C---CceEEEeCC----Cc
Confidence 3556667777899887543 25789999987654444567789999999987765 2 344444432 35
Q ss_pred EEccC-CCCH
Q 015222 171 VFEKL-GPSL 179 (411)
Q Consensus 171 v~e~~-~~~L 179 (411)
|+||+ |..+
T Consensus 75 v~e~i~G~~l 84 (302)
T cd05156 75 IEEFIPSRTL 84 (302)
T ss_pred hhheeCCCcC
Confidence 78888 5554
No 472
>PRK05231 homoserine kinase; Provisional
Probab=97.80 E-value=0.00059 Score=64.91 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=50.5
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee---eeecCCeEEEEEc
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFE 173 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e 173 (411)
++.|+.|....+|+.... +| .+++|++. ....+....|..++..|...++..|.++.-.+ +....+..+++++
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~--~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFE--RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEec--cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 456777887899998643 33 58999876 22334556688889998877775555443211 1223567899999
Q ss_pred cC-CC
Q 015222 174 KL-GP 177 (411)
Q Consensus 174 ~~-~~ 177 (411)
++ |.
T Consensus 103 ~l~G~ 107 (319)
T PRK05231 103 FLEGK 107 (319)
T ss_pred ecCCC
Confidence 99 54
No 473
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.77 E-value=0.0004 Score=65.47 Aligned_cols=139 Identities=24% Similarity=0.270 Sum_probs=99.9
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEeccc---------------------------hhhhHHHHHHHHHHHHHhcC
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLARH 148 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~---------------------------~~~~~~~~~E~~~l~~l~~~ 148 (411)
|-..|..|--+.||.|.. .+|..+|||+++.+ ....-.+..|+.-|++|+..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345677888889999974 56777999998521 01123356799999999999
Q ss_pred CCCCcceEEEeeeeecCCeEEEEEccCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcE
Q 015222 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSL--YDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENI 225 (411)
Q Consensus 149 ~i~~~~iv~~~~~~~~~~~~~lv~e~~~~~L--~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dikp~NI 225 (411)
+|..|--+-+. ...|||+|+|.+= .-.|... .++...+..+-.|++.-+.-|- ..++||.||.-=|+
T Consensus 227 GIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~ 296 (520)
T KOG2270|consen 227 GIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNL 296 (520)
T ss_pred CCCCCCceeee-------cceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhh
Confidence 88776544442 3469999995432 2233332 4888888888899988887765 46999999999999
Q ss_pred EEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccC
Q 015222 226 LLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQ 273 (411)
Q Consensus 226 li~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~ 273 (411)
|+-.. .+.++|.+.+...+.
T Consensus 297 LyhdG----------------------------~lyiIDVSQSVE~DH 316 (520)
T KOG2270|consen 297 LYHDG----------------------------KLYIIDVSQSVEHDH 316 (520)
T ss_pred eEECC----------------------------EEEEEEccccccCCC
Confidence 98543 688999887765443
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.76 E-value=0.00044 Score=65.42 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=51.5
Q ss_pred EEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee---eeecCCeEEEE
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIV 171 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv 171 (411)
..++.++.|....+|++.. .++ .+++|+..... ..+....|.+++..|...++..+.++...+ +....+..+++
T Consensus 25 ~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l 101 (307)
T TIGR00938 25 LSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACL 101 (307)
T ss_pred eeccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEE
Confidence 3456777887789998864 334 57889876532 234566788899999877664444443221 11234678999
Q ss_pred EccC-CC
Q 015222 172 FEKL-GP 177 (411)
Q Consensus 172 ~e~~-~~ 177 (411)
|+++ |.
T Consensus 102 ~e~i~G~ 108 (307)
T TIGR00938 102 VEFLQGL 108 (307)
T ss_pred EEeCCCC
Confidence 9998 53
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.75 E-value=0.00014 Score=77.19 Aligned_cols=204 Identities=20% Similarity=0.265 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 015222 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212 (411)
Q Consensus 134 ~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 212 (411)
....|...+..+.|.|++.+....+...+.. -...+..++| ..++...++... ..+...++.+..+++.||.|+|+
T Consensus 228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 228 TTEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHH
Confidence 3445777788888888743333333222221 1223445677 778888887765 68889999999999999999999
Q ss_pred CCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEe--ecCCcccccCCCcc--cccCCCccccc
Q 015222 213 LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLI--DFGSTTFEHQDHSY--VVSTRHYRAPE 288 (411)
Q Consensus 213 ~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~--~~gt~~y~aPE 288 (411)
... .|+.+..... + ....+....+.++ ||+.+......... ..-+..+.++|
T Consensus 305 ~~l-------~~v~L~~s~~-----~------------~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e 360 (1351)
T KOG1035|consen 305 LSL-------EHVVLSASSS-----K------------ESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADE 360 (1351)
T ss_pred hcc-------ceeEEecccc-----c------------ccccCccceeecchhhhcccccCCCcccchhhcCcccccccc
Confidence 843 4444432210 0 0001223344444 77776655443322 23455688888
Q ss_pred eecCCCCCc--cchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHHHhhh-hhhhhhhccCCccCCCCCC
Q 015222 289 VILGLGWNY--PCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPHHMVIRAD-RRAEKYFRRGARLDWPDGA 365 (411)
Q Consensus 289 ~~~~~~~~~--~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~-~~~~~li~~~l~~~~~~rp 365 (411)
......++. ..|+|.+|..+..+..|..+-.-. ..... +..... ....+.+.+|+.-+ .
T Consensus 361 ~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~------~~~~~--------~l~~~~~~~~~d~~~~~~~~~----~ 422 (1351)
T KOG1035|consen 361 DLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS------AVPVS--------LLDVLSTSELLDALPKCLDED----S 422 (1351)
T ss_pred ccccccchhhhhhHHHHHHHHHhhhhhcCcccccc------cchhh--------hhccccchhhhhhhhhhcchh----h
Confidence 887765554 479999999999998876543211 11111 111111 13456667776666 8
Q ss_pred CcHHHHHHHHhcCCCCc
Q 015222 366 TSRDSMRAVWKLLRLPV 382 (411)
Q Consensus 366 ~~R~t~~~il~~~~~~~ 382 (411)
+.|.++.+++.|+++.-
T Consensus 423 ~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 423 EERLSALELLTHPFLRF 439 (1351)
T ss_pred hhccchhhhhhchhccc
Confidence 99999999999998763
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.73 E-value=0.00023 Score=65.53 Aligned_cols=71 Identities=13% Similarity=0.073 Sum_probs=45.6
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEeccchhhh-HHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-C
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G 176 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~-~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~ 176 (411)
.+..|-.+.+|+.. .+++.+++|+........ -...+|..+++.+...++ .|.++. ... -++||||+ |
T Consensus 3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~-~P~~i~---~~~----~~~v~e~i~G 72 (256)
T TIGR02721 3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL-APKPIL---VNE----HWLLVEWLEG 72 (256)
T ss_pred cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC-CCceEE---EeC----CEEEEEeccC
Confidence 34567778899886 446678899865432221 235779999999987665 344332 222 26899999 6
Q ss_pred CCH
Q 015222 177 PSL 179 (411)
Q Consensus 177 ~~L 179 (411)
..+
T Consensus 73 ~~~ 75 (256)
T TIGR02721 73 EVI 75 (256)
T ss_pred ccc
Confidence 544
No 477
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.44 E-value=0.00019 Score=66.44 Aligned_cols=130 Identities=20% Similarity=0.222 Sum_probs=90.5
Q ss_pred eEEEeeeccccceEEEEEEeCCCCcEEEEEEeccch-----------------------hhhHHHHHHHHHHHHHhcCCC
Q 015222 94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI 150 (411)
Q Consensus 94 y~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----------------------~~~~~~~~E~~~l~~l~~~~i 150 (411)
+.+.++||-|--+.||.+-+. .|.+.++|+-+... -.+-.+.+|...|+.|..+..
T Consensus 94 ~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 677889999999999999764 46678888643100 122345789999999987765
Q ss_pred CCcceEEEeeeeecCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCcEEEec
Q 015222 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229 (411)
Q Consensus 151 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dikp~NIli~~ 229 (411)
.-| +.++ .+..|+|||++ |..|.+.-+- . .+..+...+..-+--|-..|+||+|..-=||+|.+
T Consensus 173 pVP---kpiD----~~RH~Vvmelv~g~Pl~~v~~v-----~---d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~d 237 (465)
T KOG2268|consen 173 PVP---KPID----HNRHCVVMELVDGYPLRQVRHV-----E---DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKD 237 (465)
T ss_pred CCC---Cccc----ccceeeHHHhhcccceeeeeec-----C---ChHHHHHHHHHHHHHHHHcCceecccchheeEEec
Confidence 332 2222 35678999999 7777654322 1 22334444555556777899999999999999998
Q ss_pred CcccccCCcc
Q 015222 230 AEYVKVPDYK 239 (411)
Q Consensus 230 ~~~~~l~df~ 239 (411)
++.++++||-
T Consensus 238 d~~i~vIDFP 247 (465)
T KOG2268|consen 238 DDKIVVIDFP 247 (465)
T ss_pred CCCEEEeech
Confidence 8877777764
No 478
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.41 E-value=0.0026 Score=60.75 Aligned_cols=82 Identities=21% Similarity=0.187 Sum_probs=51.5
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEecc--------chhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEE
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~--------~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~l 170 (411)
.||.|.-..||++.+..+++.|+||.-.. -....++...|...|+....- . ...+.+++. .+.+...+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~-~-P~~vP~vy~--~D~e~~~~ 77 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEH-V-PHLVPRIFH--FDTEMAVT 77 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhcc-C-ccccCeEEE--Ecccccee
Confidence 57999999999999765446799997531 122345566788888776432 1 113344443 23456679
Q ss_pred EEccC--CCCHHHHHH
Q 015222 171 VFEKL--GPSLYDFLR 184 (411)
Q Consensus 171 v~e~~--~~~L~~~l~ 184 (411)
|||++ ...|.+.|.
T Consensus 78 vMEdL~~~~ilR~~Li 93 (370)
T TIGR01767 78 VMEDLSHHKIARKGLI 93 (370)
T ss_pred hHhhCccchHHHHHHH
Confidence 99998 334545443
No 479
>PLN02236 choline kinase
Probab=97.34 E-value=0.0034 Score=60.37 Aligned_cols=76 Identities=16% Similarity=0.065 Sum_probs=49.1
Q ss_pred EEeeeccccceEEEEEEeCC----CCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEE
Q 015222 96 ILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV 171 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~----~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv 171 (411)
-+..|-.|-...+|++.... .++.|++|+........-...+|..+++.+...+++ .++++.+..+ .|
T Consensus 40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~----P~~~~~~~~g----~v 111 (344)
T PLN02236 40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQG----PRLLGRFPNG----RV 111 (344)
T ss_pred EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCC----CceEEEECCc----eE
Confidence 34455557788999986432 346799999865433333346799999999887762 3444555332 47
Q ss_pred EccC-CCCH
Q 015222 172 FEKL-GPSL 179 (411)
Q Consensus 172 ~e~~-~~~L 179 (411)
.+|+ +.+|
T Consensus 112 ~efi~g~~l 120 (344)
T PLN02236 112 EEFIHARTL 120 (344)
T ss_pred EEeeCCCCC
Confidence 8888 5454
No 480
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.28 E-value=0.0013 Score=64.58 Aligned_cols=83 Identities=19% Similarity=0.244 Sum_probs=56.5
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh--------hHHHhhhhhhhhhhccCCccCCCCCCCcH
Q 015222 297 YPCDLWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPH--------HMVIRADRRAEKYFRRGARLDWPDGATSR 368 (411)
Q Consensus 297 ~~~DiwSlGvil~elltg~~pf~~~~~~~~~~~i~~~~~~~p~--------~~~~~~~~~~~~li~~~l~~~~~~rp~~R 368 (411)
+|+||||+|.++.|+..|...+......+.+..+.+....... .+....+....++..+|+-.. |..|
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~----~~ir 185 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLE----PIIR 185 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccc----cccc
Confidence 5999999999999999999998877777777666654322111 122233444555556665444 8888
Q ss_pred HHHHHHHhcCCCCcc
Q 015222 369 DSMRAVWKLLRLPVI 383 (411)
Q Consensus 369 ~t~~~il~~~~~~~~ 383 (411)
|...+..+++-|..+
T Consensus 186 ~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 186 PLPMELSKRCSFTEV 200 (725)
T ss_pred cchhHHhcCccHHHH
Confidence 888777777766654
No 481
>PRK12396 5-methylribose kinase; Reviewed
Probab=97.20 E-value=0.0039 Score=60.32 Aligned_cols=83 Identities=23% Similarity=0.237 Sum_probs=53.7
Q ss_pred EeeeccccceEEEEEEeCCCCcEEEEEEecc----c---hhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS----I---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 97 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~----~---~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.+.||.|.-..||++.+...++.|+||.-.. . ....++...|.++|+....-.. ..+.+++.+ +.+...
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P--~~VP~vy~~--D~e~~~ 109 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAP--GLVPKVYLF--DSVMNC 109 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCC--CcCCeEEEE--CcHHhh
Confidence 6788999999999998854456799997531 1 2344666778889887754211 123455433 345677
Q ss_pred EEEccC-C-CCHHHHH
Q 015222 170 IVFEKL-G-PSLYDFL 183 (411)
Q Consensus 170 lv~e~~-~-~~L~~~l 183 (411)
+|||++ . ..|.+.|
T Consensus 110 ~vMEdL~~~~ilR~~L 125 (409)
T PRK12396 110 CVMEDLSDHTILRTAL 125 (409)
T ss_pred HHHHhCcccHHHHHHH
Confidence 899998 3 3444444
No 482
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.19 E-value=0.001 Score=58.08 Aligned_cols=94 Identities=21% Similarity=0.176 Sum_probs=68.6
Q ss_pred HHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015222 136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF---LRKNSYRSFPIDLVRELGRQLLESVAFMH 211 (411)
Q Consensus 136 ~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~---l~~~~~~~l~~~~~~~i~~qi~~aL~~LH 211 (411)
..|.-+++.+.+.. ++.+++|++-. ++|.||. .+++... +... ..-++..+.+|+.++++.+++|+
T Consensus 7 ~~E~lll~~l~~~~----~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~--~~~~w~~R~~iA~~lL~~l~~l~ 76 (188)
T PF12260_consen 7 NNEPLLLQLLQGSE----PFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQF--LQSPWEQRAKIALQLLELLEELD 76 (188)
T ss_pred ccHHHHHHHcCCCC----CCCCeeeECCC----EEEEEeecCccccccccccccc--cccCHHHHHHHHHHHHHHHHHHh
Confidence 34777888887642 45899998843 5688998 4555421 1111 14679999999999999999999
Q ss_pred h---CCceecCCCCCcEEEecCcccccCCcc
Q 015222 212 E---LRLIHTDLKPENILLVSAEYVKVPDYK 239 (411)
Q Consensus 212 ~---~givH~Dikp~NIli~~~~~~~l~df~ 239 (411)
. ..+.-.|++++|+-++++|.+|+.|..
T Consensus 77 ~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld 107 (188)
T PF12260_consen 77 HGPLGFFYLCDVSPDNFGVNDDGRLKLIDLD 107 (188)
T ss_pred cCCCCcEEEeecchHHeEEeCCCcEEEEech
Confidence 7 348889999999999988755554443
No 483
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.19 E-value=0.0048 Score=58.98 Aligned_cols=74 Identities=12% Similarity=0.240 Sum_probs=46.9
Q ss_pred eeeccccceEEEEEEeCCC---CcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~---~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
+.|..|-...+|++..... +..|++|+........-...+|..+++.+...++. .+++.++.. + +|.+|
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~----P~~l~~~~~-G---~i~~f 91 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG----AKLLGVFGN-G---MIQSF 91 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC----CceeEEeCC-c---Eeehh
Confidence 4444477778898865432 34799998865443333456799999999887773 344544432 2 47888
Q ss_pred C-CCCH
Q 015222 175 L-GPSL 179 (411)
Q Consensus 175 ~-~~~L 179 (411)
+ |..|
T Consensus 92 i~g~~l 97 (330)
T PLN02421 92 INARTL 97 (330)
T ss_pred hcCCCC
Confidence 7 5443
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.15 E-value=0.0049 Score=57.29 Aligned_cols=46 Identities=24% Similarity=0.098 Sum_probs=30.3
Q ss_pred eccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhc
Q 015222 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147 (411)
Q Consensus 100 lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~ 147 (411)
.++|-...|+.+. ...|+.+++|.-+.. .......+|..+|+.+..
T Consensus 19 ~~~g~~~~v~~i~-~~~g~~~VlR~p~~~-~~~~~l~rE~~vL~~L~~ 64 (276)
T cd05152 19 NESGLDFQVVFAK-DTDGVPWVLRIPRRP-DVSERAAAEKRVLALVRK 64 (276)
T ss_pred cCCcceeEEEEEE-cCCCCeEEEEecCCH-HHHHHHHHHHHHHHHHHh
Confidence 3455555666653 234677889987532 234567889999999975
No 485
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.10 E-value=0.0001 Score=80.10 Aligned_cols=151 Identities=13% Similarity=0.018 Sum_probs=106.2
Q ss_pred HHHHHHHHHHhcCCCCCcceEEEeeeeec--CCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHH
Q 015222 136 MIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSY--RSFPIDLVRELGRQLLESVAFM 210 (411)
Q Consensus 136 ~~E~~~l~~l~~~~i~~~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~L 210 (411)
..|...++...|.++ .....-... ....+.+++++ +|.+.+.+-+... ..+...-+.....+.+.+..-+
T Consensus 1277 l~e~de~~~~~h~~~-----~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ 1351 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLT-----EVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVI 1351 (2724)
T ss_pred hhhhhhhhhhhceee-----ecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchh
Confidence 344445555666654 333222221 34568999999 9999999875432 2344455555555657777777
Q ss_pred HhC-----CceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCcccccCCC---cccccCC
Q 015222 211 HEL-----RLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGSTTFEHQDH---SYVVSTR 282 (411)
Q Consensus 211 H~~-----givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~ 282 (411)
|++ -.+|+++|+-|.+|..+. .++++++|+.+...... ...++++
T Consensus 1352 ls~tnlg~T~v~~~Lkf~lpmIVtny---------------------------~v~~gk~gLdKIknp~~sf~Gl~l~sp 1404 (2724)
T KOG1826|consen 1352 LSLTNLGNTNVSKSLKFTLPMIVTNY---------------------------NVKLGKGGLDKIKNPVLSFFGLELCSP 1404 (2724)
T ss_pred hhcccCCccchhhhhhhhccceecCC---------------------------cccccccccccccCchHhhhhhhhCCH
Confidence 764 278999999999986554 67777777777433222 3357788
Q ss_pred CccccceecCCCCCccchhHHHHHHHHHHHhCCCCC
Q 015222 283 HYRAPEVILGLGWNYPCDLWSVGCILVELCSGEALF 318 (411)
Q Consensus 283 ~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~pf 318 (411)
.|++|++...-.++.++|||+.|+.+|++..|..+|
T Consensus 1405 ~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1405 IYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 999999998888998899999999999998888776
No 486
>PRK10593 hypothetical protein; Provisional
Probab=97.10 E-value=0.0043 Score=58.35 Aligned_cols=106 Identities=17% Similarity=0.138 Sum_probs=73.1
Q ss_pred EEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCC-CCCcceEEEeeeee---cCCeEEE
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFD---YRNHICI 170 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~~~iv~~~~~~~---~~~~~~l 170 (411)
.-.+.||.|..+.||+..... + .+.+|+.+. ......+..|...|+.|.... +.. .++++++. ..+..++
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpV---P~V~~~~~~~~~~g~~~L 90 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQ-G-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTVRM---PTVYGVMTHEQSPGPDVL 90 (297)
T ss_pred heeeecCCccceeEEEEEcCC-C-CEEEEEecc-cccchHHHHHHHHHHHHccCCCCCc---CcEEEEeccCCcCCCeEE
Confidence 345789999999999985432 3 477787543 223467889999999997643 433 44554443 3467899
Q ss_pred EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 015222 171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213 (411)
Q Consensus 171 v~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 213 (411)
|||++ |.++.+. ..+......+..+++++|.-||+.
T Consensus 91 VmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 91 LLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred EEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 99999 7666541 133445567778888999999984
No 487
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.94 E-value=0.036 Score=52.87 Aligned_cols=74 Identities=16% Similarity=0.095 Sum_probs=46.9
Q ss_pred ccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee--eeecCCeEEEEEccC-CC
Q 015222 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKL-GP 177 (411)
Q Consensus 103 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~--~~~~~~~~~lv~e~~-~~ 177 (411)
+.-..||+... .++..+++|+.+........+..|+..+..|....+.-+-.+..-+ ....++..+.+++++ |.
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G~ 112 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRRGGR 112 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeeeCCC
Confidence 34457888864 3456699999875444566778899999999876653211111112 123356788899998 44
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.94 E-value=0.025 Score=53.48 Aligned_cols=67 Identities=10% Similarity=0.237 Sum_probs=42.1
Q ss_pred EEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee---eeecCCeEEEEEccC-CCC
Q 015222 107 QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVFEKL-GPS 178 (411)
Q Consensus 107 ~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~---~~~~~~~~~lv~e~~-~~~ 178 (411)
.||++.. ..| .+++|++... ......|+.++..|...++.-+.++...+ +...++..+++++++ |.+
T Consensus 11 ~v~~v~t-~~g-~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~ 81 (313)
T TIGR02906 11 NVYKVET-DSG-NKCLKKINYP---PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRE 81 (313)
T ss_pred cEEEEEe-CCC-CeEEEEcCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCcC
Confidence 4888763 233 5889987532 24456688888888877764344443321 122356789999999 533
No 489
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.82 E-value=0.011 Score=55.59 Aligned_cols=77 Identities=13% Similarity=0.039 Sum_probs=44.3
Q ss_pred EEEeeeccccceEEEEEEeCCCCcEEEEEEec--cchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecC--CeEEE
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NHICI 170 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~--~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~--~~~~l 170 (411)
.+++.+..|....+|...+. ++.+++..-. ..........+|..+++.+..-.+.. ...++.+..+ +..+.
T Consensus 28 ~~v~~~~~G~sn~t~~~~~~--~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~---p~~~~~~~~~~~g~pf~ 102 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGDT--GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPV---PRAFGLCGEGYLGTPFY 102 (321)
T ss_pred ceeeeccCCcccceEEEecC--CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCC---cccccccccCCCCCceE
Confidence 34455544444455655443 6778887211 11234455677888888886644422 3344444444 37799
Q ss_pred EEccC-C
Q 015222 171 VFEKL-G 176 (411)
Q Consensus 171 v~e~~-~ 176 (411)
||+++ |
T Consensus 103 v~~~veG 109 (321)
T COG3173 103 VMEWVEG 109 (321)
T ss_pred EEEEecc
Confidence 99999 5
No 490
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.79 E-value=0.026 Score=55.03 Aligned_cols=74 Identities=16% Similarity=0.149 Sum_probs=48.1
Q ss_pred EEeeeccccceEEEEEEeCCCCcEEEEEEecc-----ch---hhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-----IN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~-----~~---~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
..+.||.|....||+..+. +..|+||.-.. .. ........|...|+.+.... ..++.+++.+.. +.
T Consensus 36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~ 109 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TM 109 (418)
T ss_pred eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CC
Confidence 3678899999999999863 44589997541 11 13344555777777765321 123466666665 44
Q ss_pred EEEEEccC
Q 015222 168 ICIVFEKL 175 (411)
Q Consensus 168 ~~lv~e~~ 175 (411)
.+++||++
T Consensus 110 ~vlvME~L 117 (418)
T PLN02756 110 ALIGMRYL 117 (418)
T ss_pred CEEEEeec
Confidence 67889999
No 491
>PTZ00384 choline kinase; Provisional
Probab=96.50 E-value=0.062 Score=52.36 Aligned_cols=76 Identities=20% Similarity=0.244 Sum_probs=46.6
Q ss_pred EEeeeccccceEEEEEEeCCCC------cEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEE
Q 015222 96 ILSKMGEGTFGQVVECFDNEKK------ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC 169 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~~------~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~ 169 (411)
.++.|..|-...+|++...... +.|++++........-...+|..+++.+...+++ .++++.+.. +
T Consensus 54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glg----P~l~~~f~~----g 125 (383)
T PTZ00384 54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFG----PKIIGRFGD----F 125 (383)
T ss_pred EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCC----CeEEEecCC----E
Confidence 3455655888899998654321 2255555432222223346699999999887762 466666643 5
Q ss_pred EEEccC-CCCH
Q 015222 170 IVFEKL-GPSL 179 (411)
Q Consensus 170 lv~e~~-~~~L 179 (411)
+|.||+ |.+|
T Consensus 126 ~l~efIeGr~l 136 (383)
T PTZ00384 126 TIQEWVEGNTM 136 (383)
T ss_pred EEEEEeccccC
Confidence 888988 5544
No 492
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.38 E-value=0.0098 Score=52.89 Aligned_cols=54 Identities=20% Similarity=0.183 Sum_probs=35.1
Q ss_pred CcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCC
Q 015222 117 KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPS 178 (411)
Q Consensus 117 ~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~ 178 (411)
++.|+||+........-....|..+++.+...+++ .++++.+..+ .|.+|+ |.+
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~----p~~~~~~~~g----~v~e~i~g~~ 56 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLG----PKIIYFFENG----RVEEFIEGRT 56 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSS----S-EEEEETTE----EEEE--SSEE
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCC----CeEEEEcCCC----cEEEEecccc
Confidence 46789999887655566777899999999887762 4555555432 455777 444
No 493
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.07 E-value=0.043 Score=51.21 Aligned_cols=75 Identities=16% Similarity=0.213 Sum_probs=50.1
Q ss_pred EEEeeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEcc
Q 015222 95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174 (411)
Q Consensus 95 ~i~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~ 174 (411)
+-.+.++.|....+|+.. .+++.+.||+-. ......+..|..-|+.|...+- ..+.+++.+....+..+|||||
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~--~~vP~vi~~G~~~~~~fLlle~ 93 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP--IRVPKVIAWGEYDDDAFLLLEF 93 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT--SBS--EEEEEE-SSCCEEEEE-
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC--CCCCeEEEEEeecCCceEEEEe
Confidence 345678889999999886 667789999865 4445678889999999954322 3456777777766677999999
Q ss_pred C
Q 015222 175 L 175 (411)
Q Consensus 175 ~ 175 (411)
+
T Consensus 94 l 94 (288)
T PF03881_consen 94 L 94 (288)
T ss_dssp -
T ss_pred e
Confidence 8
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=96.04 E-value=0.027 Score=49.71 Aligned_cols=112 Identities=16% Similarity=0.184 Sum_probs=70.3
Q ss_pred ccceEEEEEEeCCCCcEEEEEEeccchh--hhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCeEEEEEccC-CCCH
Q 015222 103 GTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL 179 (411)
Q Consensus 103 G~~g~V~~a~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L 179 (411)
|+.++.-.+..+- | +..+|.+..... ....+..+.+++.++ ++| +++..- ....+.++.|.| ....
T Consensus 73 ~gNsTl~~~kt~i-G-~L~lKKi~slp~~~~~~~y~nky~v~Arm--hGi-----lrL~ND--n~~~yGvIlE~Cy~~~i 141 (308)
T PF07387_consen 73 NGNSTLLIGKTKI-G-PLFLKKIRSLPCCINDALYFNKYRVFARM--HGI-----LRLKND--NNYKYGVILERCYKIKI 141 (308)
T ss_pred CCceEEEEecccc-c-hhhhhhccCCCcccchhhhhhhhhHHHHh--hhe-----eEeecC--CCceeEEEEeeccCccc
Confidence 4455555554333 3 355666654332 334567788899888 344 887743 445688999998 3221
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCCCCcEEEecCcccccCCccc
Q 015222 180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKF 240 (411)
Q Consensus 180 ~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--~givH~Dikp~NIli~~~~~~~l~df~~ 240 (411)
.. ..++.-=+.+|.-.|+ .+.+|+|-.|+|||-+..|++|+.|.+.
T Consensus 142 -----------~~----~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~ 189 (308)
T PF07387_consen 142 -----------NF----SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC 189 (308)
T ss_pred -----------ch----hHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence 11 1111222467888894 4799999999999999988777766653
No 495
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=95.97 E-value=0.034 Score=53.53 Aligned_cols=61 Identities=25% Similarity=0.367 Sum_probs=45.5
Q ss_pred EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-hCCceecCCCCCcEEEecCc
Q 015222 168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE 231 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH-~~givH~Dikp~NIli~~~~ 231 (411)
..++-+|. |-++..++.... .+++..++++.--.+||--+- -.+++|.|+.|.||++.-..
T Consensus 320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~ 382 (565)
T KOG1236|consen 320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK 382 (565)
T ss_pred ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence 45555677 889999988764 666777777777777765443 46899999999999996543
No 496
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.86 E-value=0.16 Score=48.39 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=50.3
Q ss_pred eeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcc-eEEEeee--eecCC--eEEEEEc
Q 015222 99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRNW--FDYRN--HICIVFE 173 (411)
Q Consensus 99 ~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~-iv~~~~~--~~~~~--~~~lv~e 173 (411)
.|.+ .-..||+....+ |+ +++|+.+.. .....+..|...+..|...++.-+- +...-+- ....+ +.+-+++
T Consensus 33 ~l~s-~eN~~f~~~~~~-g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~ 108 (331)
T COG2334 33 GLNS-EENSNFRVQTED-GR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE 108 (331)
T ss_pred cccc-ccCceEEEEecC-CC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence 4444 456788886543 33 499999887 6777888899999999887763321 1111111 11234 7888999
Q ss_pred cC-CCCHH
Q 015222 174 KL-GPSLY 180 (411)
Q Consensus 174 ~~-~~~L~ 180 (411)
|+ |..+.
T Consensus 109 ~l~G~~~~ 116 (331)
T COG2334 109 YLPGRPLE 116 (331)
T ss_pred ecCCcCcC
Confidence 99 65555
No 497
>PTZ00296 choline kinase; Provisional
Probab=95.82 E-value=0.11 Score=51.57 Aligned_cols=74 Identities=20% Similarity=0.172 Sum_probs=49.1
Q ss_pred EEeeeccccceEEEEEEeCCC--------CcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEeeeeecCCe
Q 015222 96 ILSKMGEGTFGQVVECFDNEK--------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH 167 (411)
Q Consensus 96 i~~~lG~G~~g~V~~a~~~~~--------~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~~~~~~~~ 167 (411)
-++.|..|-...+|++..... ++.|.+++........-....|..+++.+...+++ .++++.+..
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~----P~l~~~f~g--- 181 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIA----PQLLNTFSG--- 181 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCC----CceEEEeCC---
Confidence 456666677778898875421 46799999865444333456799999999888773 345555532
Q ss_pred EEEEEccC-CC
Q 015222 168 ICIVFEKL-GP 177 (411)
Q Consensus 168 ~~lv~e~~-~~ 177 (411)
+.|.||+ |.
T Consensus 182 -g~I~efi~g~ 191 (442)
T PTZ00296 182 -GRIEEWLYGD 191 (442)
T ss_pred -CEEEEeeCCc
Confidence 3467887 54
No 498
>PRK06148 hypothetical protein; Provisional
Probab=95.79 E-value=0.14 Score=56.33 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=48.9
Q ss_pred eeeccccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcC--CCCCcceEEEee-----eeec-CC--e
Q 015222 98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--DIGGTRCVQIRN-----WFDY-RN--H 167 (411)
Q Consensus 98 ~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~--~i~~~~iv~~~~-----~~~~-~~--~ 167 (411)
+.|+ |..-.+|+... .+|..+++|+.+.. ........|...|..|... .+.-|.++...+ .... ++ +
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~-~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPS-EPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCc-cchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 4564 44567888763 45667999999754 2334555677788777653 554555554332 1111 22 5
Q ss_pred EEEEEccC-CCCHHH
Q 015222 168 ICIVFEKL-GPSLYD 181 (411)
Q Consensus 168 ~~lv~e~~-~~~L~~ 181 (411)
.+.+++|+ |..+.+
T Consensus 108 ~vrLl~~l~G~~l~~ 122 (1013)
T PRK06148 108 LLRLLSWLPGTPLAE 122 (1013)
T ss_pred EEEEEeccCCCcHHh
Confidence 77889999 666654
No 499
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.70 E-value=0.17 Score=47.77 Aligned_cols=66 Identities=14% Similarity=0.225 Sum_probs=40.1
Q ss_pred ccceEEEEEEeCCCCcEEEEEEeccchhhhHHHHHHHHHHHHHhcCCCCCcceEEEee------eeecCCeEEEEEccC
Q 015222 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN------WFDYRNHICIVFEKL 175 (411)
Q Consensus 103 G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~iv~~~~------~~~~~~~~~lv~e~~ 175 (411)
|.-+.||++.- ..| .+++|.+... .+.+...+.++..|...++. .++.++. +...++..+++|+++
T Consensus 17 ~~~~~v~~v~T-~~G-~~~Lk~~~~~---~~~l~~~~~~~~~L~~~G~~--~~~~~~~t~~G~~~~~~~~~~~~L~~wi 88 (309)
T TIGR02904 17 QVTGKLFKVYT-DQG-VFALKKLYAD---RNTIESFVSQIQVLSEKGFS--RIVPVYPTKDGSYYLFHGHFLYYLMPWL 88 (309)
T ss_pred cccCcEEEEEe-CCC-CEEEEEeccc---hHhHHHHHHHHHHHHHcCCC--cCCceeecCCCCeeeEECCEEEEEeCCc
Confidence 33568998854 344 5889988632 33445566777788766652 2233321 223356679999998
No 500
>PHA03111 Ser/Thr kinase; Provisional
Probab=95.34 E-value=0.019 Score=53.62 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHh----CCceecCCCCCcEEEecCcccccCCcccccccCCCCCccccCCCCCCeeEeecCCc
Q 015222 193 IDLVRELGRQLLESVAFMHE----LRLIHTDLKPENILLVSAEYVKVPDYKFLSRSSKDGSYFKNLPKSSAIKLIDFGST 268 (411)
Q Consensus 193 ~~~~~~i~~qi~~aL~~LH~----~givH~Dikp~NIli~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a 268 (411)
.+.++.++.||+.-.-..-+ ...+|-||||+||||-+........++-..-. ..+-...+|.||.+|
T Consensus 278 ~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~v---------F~Epi~~~LnDFDfS 348 (444)
T PHA03111 278 VEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYV---------FNEPIKACLNDFDFS 348 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEE---------eccchhhhhcccCHH
Confidence 46678888898765433433 36999999999999977653322222211000 123447789999988
Q ss_pred ccccCC
Q 015222 269 TFEHQD 274 (411)
Q Consensus 269 ~~~~~~ 274 (411)
...+-.
T Consensus 349 qv~~i~ 354 (444)
T PHA03111 349 QVANII 354 (444)
T ss_pred HHccch
Confidence 765543
Done!