Query 015224
Match_columns 411
No_of_seqs 234 out of 866
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 08:51:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gak_A Beta-1,6-N-acetylglucos 100.0 3E-63 1E-67 505.6 23.1 278 53-356 81-388 (391)
2 3bcv_A Putative glycosyltransf 84.2 8.1 0.00028 34.1 10.9 93 55-164 4-98 (240)
3 1qg8_A Protein (spore coat pol 74.0 15 0.0005 32.8 9.2 108 56-175 1-114 (255)
4 4hg6_A Cellulose synthase subu 73.4 27 0.00091 38.0 12.6 116 52-185 136-273 (802)
5 4fix_A UDP-galactofuranosyl tr 72.4 10 0.00036 40.3 8.9 112 52-175 176-294 (657)
6 2d7i_A Polypeptide N-acetylgal 70.2 20 0.00069 37.1 10.3 108 53-175 109-222 (570)
7 2z86_A Chondroitin synthase; G 66.8 34 0.0012 35.3 11.2 105 55-175 92-200 (625)
8 1xhb_A Polypeptide N-acetylgal 63.0 33 0.0011 34.1 9.9 108 53-175 26-140 (472)
9 2z86_A Chondroitin synthase; G 59.0 58 0.002 33.5 11.3 100 54-172 373-474 (625)
10 2ffu_A Ppgalnact-2, polypeptid 49.9 61 0.0021 32.5 9.4 101 53-174 63-168 (501)
11 1ezi_A CMP-N-acetylneuraminic 44.2 1E+02 0.0036 26.9 9.1 90 70-176 30-121 (228)
12 2fy7_A Beta-1,4-galactosyltran 38.5 1.7E+02 0.0058 27.3 10.0 77 54-166 63-145 (287)
13 1qwj_A Cytidine monophospho-N- 29.7 1.8E+02 0.0061 25.6 8.2 25 150-175 94-118 (229)
14 3ckj_A Putative uncharacterize 22.2 3.2E+02 0.011 25.4 8.9 116 54-184 46-166 (329)
15 3gx1_A LIN1832 protein; APC633 20.9 3.5E+02 0.012 22.1 8.4 93 57-164 4-98 (130)
16 3iek_A Ribonuclease TTHA0252; 20.2 29 0.00098 34.6 0.9 46 54-103 367-414 (431)
No 1
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=100.00 E-value=3e-63 Score=505.56 Aligned_cols=278 Identities=22% Similarity=0.339 Sum_probs=237.6
Q ss_pred CCCCeEEEEEEecCCCHHHHHHHHHHHcCCCCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeecCc
Q 015224 53 SYPVTFAYLLSASKGDTIKLKRALLALYHPGNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRGP 132 (411)
Q Consensus 53 ~~~~kiAyLI~~hk~d~~~l~rLl~aLy~p~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg~ 132 (411)
+.+|||||+|++|+ |+++++||++++|||+|.||||+|+|++..+++.+.+.. .+++||+|++++..|.|||+
T Consensus 81 e~~~kiAflil~h~-d~~~l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~------~~f~NV~v~~~~~~v~WGg~ 153 (391)
T 2gak_A 81 EVGFPIAYSIVVHH-KIEMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIA------SCFDNVFVASQLESVVYASW 153 (391)
T ss_dssp HHTSCEEEEEEECS-CHHHHHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHH------HTCTTEEECSSCCCCCTTSH
T ss_pred ccCCCEEEEEEecC-CHHHHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHH------hcCCCEEEeccCcccccCCc
Confidence 34699999999998 999999999999999999999999999988777765432 47899999999999999999
Q ss_pred cHHHHHHHHHHHHHhCCC-CcEEEEccCCcccccChhhHHHHHhcCCCCcceEecccCCCcccccccc--ceeeCCCccc
Q 015224 133 TMLATTLHAIAMLLRCCK-WDWFINLSASDYPLVTQDDLIEAFSDLPRDLNFIQHSSHLGWKMNKRAK--PIIIDPGLYS 209 (411)
Q Consensus 133 S~V~AtL~~~~~lL~~~~-wdyfi~LSgsDyPLkt~~~i~~~fs~~~~~~nFIe~~~~~gwk~~~R~~--~~i~dpgly~ 209 (411)
|||+|+++||+.||+... |||||||||+||||+|+++|.++|+.+ +|+|||++....+|++. |++ +...+++++
T Consensus 154 S~v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~-~~~nFIe~~~~~~~~~~-R~~~~~~~~~~~l~- 230 (391)
T 2gak_A 154 TRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCS-TGENNLETEKMPPNKEE-RWKKRYAVVDGKLT- 230 (391)
T ss_dssp HHHHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHT-TTCCBCCBEECCGGGSH-HHHEEEEEETTEEE-
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhc-CCCceeeccCCCccccc-ceEeeeecccccee-
Confidence 999999999999999774 999999999999999999999999864 78999999888888753 443 333344321
Q ss_pred cCCccceeeeccCCCCccceEEeeCCCCCCCCcceEEecHHHHHHhhhccCCChHHHHHHhcCCCCCCchhHHHHhhcC-
Q 015224 210 LNKSEIWWVIKQRSIPSAFKLYTEDTHPKEHGSAWTILSRPFAEYCIMGWDNLPRSLLLYYTNFVSSPEGYFQTVICNS- 288 (411)
Q Consensus 210 ~~k~~~~~~~~~R~lP~~~~l~~~~~~~~~~GS~W~~LsR~fvey~i~~~dnlpr~ll~yf~~~~~pDE~fFqTvl~Ns- 288 (411)
.+..+++.+|.++++|+ |||||+|||+||+||++ |+.++.+++||+++++|||+||||++.|+
T Consensus 231 ------~~~~~k~~~P~~~~~~~--------GSqW~~LtR~~v~~vl~--d~~~~~~~~~~k~t~~pDE~ffqTll~~~~ 294 (391)
T 2gak_A 231 ------NTGIVKAPPPLKTPLFS--------GSAYFVVTREYVGYVLE--NENIQKLMEWAQDTYSPDEFLWATIQRIPE 294 (391)
T ss_dssp ------EEEEECCCCSCSSCCEE--------CCSCCEEEHHHHHHHHH--CHHHHHHHHHHTTSSSGGGTHHHHHTTSTT
T ss_pred ------eecccccCCccccceec--------ccceeEecHHHHHHHHh--CCcHHHHHHHHcCCcCCchhHHHHHhhccC
Confidence 34456788898999999 99999999999999998 55678899999999999999999998764
Q ss_pred --------CCCCCcccCCCeeeEecCCCCC------CCCC----------CCCHHHHHHHhcCCccEEeccCC--ChHHH
Q 015224 289 --------EDYKNTTANHDLHYITWDTPPK------QHPR----------SLGLKDFRRMVLSSRPFARKFKQ--NSPVL 342 (411)
Q Consensus 289 --------~~f~~t~vn~~LRyi~W~~~~~------~~P~----------~l~~~D~~~l~~S~a~FARKF~~--d~~vl 342 (411)
..|+++++|+++|||+|+++.+ .||. +|+.+|++.|.+|+++|||||++ |++|+
T Consensus 295 ~pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl~~l~~s~~lFARKF~~~~d~~~l 374 (391)
T 2gak_A 295 VPGSFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDLSWMLRQHHLFANKFDMDVDPFAI 374 (391)
T ss_dssp STTCCCSSGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGHHHHTTSCCSEEECCCTTTCHHHH
T ss_pred CCCccccccccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHHHHHHHhCCCceEEccCCccCHHHH
Confidence 2345566899999999985322 2443 89999999999999999999998 78999
Q ss_pred HHHHHHHhcccCCC
Q 015224 343 DKIDRDLLKRHRRR 356 (411)
Q Consensus 343 d~Id~~ll~r~~~~ 356 (411)
+|||+.|.+|...+
T Consensus 375 ~~l~~~l~~r~~~~ 388 (391)
T 2gak_A 375 QCLDEHLRRKALEN 388 (391)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhhhcc
Confidence 99999999887543
No 2
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=84.21 E-value=8.1 Score=34.12 Aligned_cols=93 Identities=14% Similarity=0.192 Sum_probs=60.8
Q ss_pred CCeEEEEEEecCCCHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeecCc
Q 015224 55 PVTFAYLLSASKGDTIKLKRALLALYHP--GNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRGP 132 (411)
Q Consensus 55 ~~kiAyLI~~hk~d~~~l~rLl~aLy~p--~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg~ 132 (411)
.|++..+|.+++ ..+.|.+.|+.|... .+.=+|=||-.+++...+.++++.+ ..++|+++... -.|
T Consensus 4 ~p~vsViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~d~t~~~~~~~~~------~~~~i~~i~~~----n~G- 71 (240)
T 3bcv_A 4 IPKVSVIVPIYN-VEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAA------QYPNIKVIHKK----NAG- 71 (240)
T ss_dssp CCSEEEEEEESS-CTTTHHHHHHHHHTCSSSSEEEEEEECCCSSSHHHHHHHHHH------HCSSEEEEECC----CCC-
T ss_pred CCcEEEEEecCC-CHHHHHHHHHHHHhCcCCCeEEEEEECCCCcCHHHHHHHHHh------hCCCEEEEECC----CCC-
Confidence 468999999998 578999999998532 1333566777776665555555432 45788888532 234
Q ss_pred cHHHHHHHHHHHHHhCCCCcEEEEccCCcccc
Q 015224 133 TMLATTLHAIAMLLRCCKWDWFINLSASDYPL 164 (411)
Q Consensus 133 S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPL 164 (411)
...|--.+++ ...-||++.|.+.|++-
T Consensus 72 -~~~a~N~g~~----~a~g~~i~~lD~Dd~~~ 98 (240)
T 3bcv_A 72 -LGMACNSGLD----VATGEYVAFCDSDDYVD 98 (240)
T ss_dssp -HHHHHHHHHH----HCCSSEEEECCTTCCCC
T ss_pred -hHHHHHHHHH----HcCCCEEEEECCCCcCC
Confidence 3333333333 33469999999999863
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=73.97 E-value=15 Score=32.78 Aligned_cols=108 Identities=10% Similarity=0.112 Sum_probs=64.5
Q ss_pred CeEEEEEEecCCCHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCcee---eeec
Q 015224 56 VTFAYLLSASKGDTIKLKRALLALYHP--GNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNL---VTYR 130 (411)
Q Consensus 56 ~kiAyLI~~hk~d~~~l~rLl~aLy~p--~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~---V~Wg 130 (411)
|++..+|.+++ ..+.|.++|+.|... .+.=+|-||-.+++...+.++++. ..++|.++..... ..+.
T Consensus 1 p~vSViIp~yn-~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~-------~~~~i~~i~~~~~~~~~~~~ 72 (255)
T 1qg8_A 1 PKVSVIMTSYN-KSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFL-------NDNRVRFYQSDISGVKERTE 72 (255)
T ss_dssp CCEEEEEEESS-CTTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGG-------GSTTEEEEECCCCSHHHHHS
T ss_pred CeEEEEEEcCC-CHHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHh-------hcCCEEEEeccccccccccc
Confidence 57889999998 578999999988531 133456777777776554444321 2567887753310 0001
Q ss_pred CccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccC-hhhHHHHHh
Q 015224 131 GPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVT-QDDLIEAFS 175 (411)
Q Consensus 131 g~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt-~~~i~~~fs 175 (411)
..+...|--.+++ ...-||++.|.+.|++... .+.+.+.|.
T Consensus 73 n~G~~~a~N~gi~----~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~ 114 (255)
T 1qg8_A 73 KTRYAALINQAIE----MAEGEYITYATDDNIYMPDRLLKMVRELD 114 (255)
T ss_dssp SCHHHHHHHHHHH----HCCCSEEEEEETTEEECTTHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH----HcCCCEEEEeCCCCccChHHHHHHHHHHH
Confidence 2334444444333 3456999999999997432 334445554
No 4
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=73.38 E-value=27 Score=37.96 Aligned_cols=116 Identities=17% Similarity=0.200 Sum_probs=64.5
Q ss_pred CCCCCeEEEEEEecCCCHHHHHHHHHHHc---CCCC-EEEEEEeCCCCHHH---------------HHHHHHHhhccccc
Q 015224 52 SSYPVTFAYLLSASKGDTIKLKRALLALY---HPGN-HYLIHMDREAPEKE---------------QREIAEFVANEPVF 112 (411)
Q Consensus 52 ~~~~~kiAyLI~~hk~d~~~l~rLl~aLy---~p~n-~y~IHvD~ka~~~~---------------~~~l~~~v~~~~~~ 112 (411)
++..|++..+|-+++.+.+.++++|+.+. .|+. .-+|=+|-.+++.. +..++++.+
T Consensus 136 ~~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~----- 210 (802)
T 4hg6_A 136 PEELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCR----- 210 (802)
T ss_dssp TTTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHH-----
T ss_pred ccCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHH-----
Confidence 34457999999999955455588888883 3432 33456676554433 223333322
Q ss_pred cccccEEEeCCceeeeecCccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccChhhH---HHHHhcCCCCcceEe
Q 015224 113 RMVNNVYIVGKPNLVTYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVTQDDL---IEAFSDLPRDLNFIQ 185 (411)
Q Consensus 113 ~~~~NV~vv~~r~~V~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt~~~i---~~~fs~~~~~~nFIe 185 (411)
..++.++.... +++|- . .++..+++...-||++.+.+.|.+ +.+.+ ...|.+ +.+...+.
T Consensus 211 --~~~v~~i~~~~--~~~GK--a----~alN~gl~~a~gd~Il~lDaD~~~--~pd~L~~lv~~~~~-dp~v~~V~ 273 (802)
T 4hg6_A 211 --ELGVVYSTRER--NEHAK--A----GNMSAALERLKGELVVVFDADHVP--SRDFLARTVGYFVE-DPDLFLVQ 273 (802)
T ss_dssp --HHTCEEEECSS--CCSHH--H----HHHHHHHHHCCCSEEEECCTTEEE--CTTHHHHHHHHHHH-SSSCCEEE
T ss_pred --hcCcEEEEecC--CCCcc--h----HHHHHHHHhcCCCEEEEECCCCCc--ChHHHHHHHHHHhc-CCCeEEEe
Confidence 23455553221 12221 1 234445555668999999999987 34444 444432 33344443
No 5
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=72.36 E-value=10 Score=40.30 Aligned_cols=112 Identities=11% Similarity=0.026 Sum_probs=71.5
Q ss_pred CCCCCeEEEEEEecCCCHHHHHHHHHHHcCC-----CCEEEEEEeCCCCHH-HHHHHHHHhhccccccccccEEEeCCce
Q 015224 52 SSYPVTFAYLLSASKGDTIKLKRALLALYHP-----GNHYLIHMDREAPEK-EQREIAEFVANEPVFRMVNNVYIVGKPN 125 (411)
Q Consensus 52 ~~~~~kiAyLI~~hk~d~~~l~rLl~aLy~p-----~n~y~IHvD~ka~~~-~~~~l~~~v~~~~~~~~~~NV~vv~~r~ 125 (411)
++.+|+++.+|.+++ ..+.+.+.|+.|... .+.=+|-||-.+.+. ....+.+.++ ...++|.++...
T Consensus 176 ~~~~pkVSVVIptYN-~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~-----~~~~~I~vI~~~- 248 (657)
T 4fix_A 176 APGTANIAVGIPTFN-RPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAA-----RLGSRLSIHDQP- 248 (657)
T ss_dssp CCSCCCEEEECCBSS-CHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHH-----HHGGGEEEEECC-
T ss_pred CCCCCeEEEEEEecC-CHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHH-----hcCCCEEEEECC-
Confidence 455789999999998 689999999999752 232468888877542 1222222221 134689988643
Q ss_pred eeeecCccHHHHHHHHHHHHHhCCCCcEEEEccCCccccc-ChhhHHHHHh
Q 015224 126 LVTYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLV-TQDDLIEAFS 175 (411)
Q Consensus 126 ~V~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLk-t~~~i~~~fs 175 (411)
+- |+ -.|--.+++.+......||+++|.+.+.+-. ..+.+.+++.
T Consensus 249 --N~-G~--a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~ 294 (657)
T 4fix_A 249 --NL-GG--SGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHR 294 (657)
T ss_dssp --CC-HH--HHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHH
T ss_pred --CC-CH--HHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHH
Confidence 22 22 3355566777776556899999998887642 2334455554
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=70.25 E-value=20 Score=37.10 Aligned_cols=108 Identities=11% Similarity=0.150 Sum_probs=69.9
Q ss_pred CCCCeEEEEEEecCCCHHHHHHHHHHHc--CCCC--EEEEEEeCCCCHHH-HHHHHHHhhccccccccccEEEeCCceee
Q 015224 53 SYPVTFAYLLSASKGDTIKLKRALLALY--HPGN--HYLIHMDREAPEKE-QREIAEFVANEPVFRMVNNVYIVGKPNLV 127 (411)
Q Consensus 53 ~~~~kiAyLI~~hk~d~~~l~rLl~aLy--~p~n--~y~IHvD~ka~~~~-~~~l~~~v~~~~~~~~~~NV~vv~~r~~V 127 (411)
...|++..+|.+++...+.|.+.|+.+. .+.+ .=+|-||-.|++.. .+.++++++ .+++|+++....
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~------~~~~v~vi~~~~-- 180 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMA------LFPSVRILRTKK-- 180 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHT------TSTTEEEEECSS--
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHH------hCCeEEEEECCC--
Confidence 3457899999999843488899888884 2223 13566777777665 666666543 357888875321
Q ss_pred eecCccHHHHHHHHHHHHHhCCCCcEEEEccCCccccc-ChhhHHHHHh
Q 015224 128 TYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLV-TQDDLIEAFS 175 (411)
Q Consensus 128 ~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLk-t~~~i~~~fs 175 (411)
......|-..+++.+ .-||++.|.+.|.+-. -.+.+.+.+.
T Consensus 181 ---n~G~~~A~N~G~~~A----~gd~i~fLD~D~~~~p~~L~~ll~~l~ 222 (570)
T 2d7i_A 181 ---REGLIRTRMLGASVA----TGDVITFLDSHCEANVNWLPPLLDRIA 222 (570)
T ss_dssp ---CCCHHHHHHHHHHHC----CSSEEEECCSSEEECTTCSHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHhc----CCCEEEEEcCCccccccHHHHHHHHHH
Confidence 234666666666554 3599999999998732 2234555554
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=66.81 E-value=34 Score=35.33 Aligned_cols=105 Identities=15% Similarity=0.147 Sum_probs=63.8
Q ss_pred CCeEEEEEEecCCCHHHHHHHHHHHcCC---CCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeecC
Q 015224 55 PVTFAYLLSASKGDTIKLKRALLALYHP---GNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRG 131 (411)
Q Consensus 55 ~~kiAyLI~~hk~d~~~l~rLl~aLy~p---~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg 131 (411)
.|++..+|.+++ ..+.+.++|+.|... .+.=+|=||-.+++...+.++++ ....+|.++... -.|
T Consensus 92 ~p~vsviIp~~n-~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~-------~~~~~i~~i~~~----~~~ 159 (625)
T 2z86_A 92 IDGLSIVIPTYN-RAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREF-------ESLLNIKYVRQK----DYG 159 (625)
T ss_dssp CCCEEEEEEESS-CHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTT-------TTTSCEEEEEEC----CCS
T ss_pred CCcEEEEEecCC-cHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHh-------hhcCCeEEEEeC----CCC
Confidence 378999999998 689999999999532 23334556655555444434322 123567776422 234
Q ss_pred ccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccC-hhhHHHHHh
Q 015224 132 PTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVT-QDDLIEAFS 175 (411)
Q Consensus 132 ~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt-~~~i~~~fs 175 (411)
.+...|.-.+++. ..-||++.|.+.+.+-.. .+.+...|.
T Consensus 160 ~g~~~a~N~g~~~----a~g~~v~~lD~D~~~~~~~l~~~~~~~~ 200 (625)
T 2z86_A 160 YQLCAVRNLGLRA----AKYNYVAILDCDMAPNPLWVQSYMELLA 200 (625)
T ss_dssp CCHHHHHHHHHHH----CCSSEEEEECTTEEECTTHHHHHHHHHH
T ss_pred cchhHHHHHHHHh----CCcCEEEEECCCCCCCHHHHHHHHHHHh
Confidence 4455554444443 357999999999998322 234444553
No 8
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=63.01 E-value=33 Score=34.09 Aligned_cols=108 Identities=12% Similarity=0.137 Sum_probs=67.7
Q ss_pred CCCCeEEEEEEecCCCHHHHHHHHHHHcC--CCC--EEEEEEeCCCCHH-HHHHHHHHhhccccccccc-cEEEeCCcee
Q 015224 53 SYPVTFAYLLSASKGDTIKLKRALLALYH--PGN--HYLIHMDREAPEK-EQREIAEFVANEPVFRMVN-NVYIVGKPNL 126 (411)
Q Consensus 53 ~~~~kiAyLI~~hk~d~~~l~rLl~aLy~--p~n--~y~IHvD~ka~~~-~~~~l~~~v~~~~~~~~~~-NV~vv~~r~~ 126 (411)
...|++..+|.+|+...+.|.++|+.|.. +.+ .=+|-||-.+++. ..+.++++++ .++ +|+++.....
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~------~~~~~v~vi~~~~n 99 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVK------KLKVPVHVIRMEQR 99 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHH------SSSSCEEEEECSSC
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHH------HCCCcEEEEECCCC
Confidence 35688999999998433899999998853 223 2356778777653 5555665543 355 7888753221
Q ss_pred eeecCccHHHHHHHHHHHHHhCCCCcEEEEccCCccccc-ChhhHHHHHh
Q 015224 127 VTYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLV-TQDDLIEAFS 175 (411)
Q Consensus 127 V~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLk-t~~~i~~~fs 175 (411)
.....|-..+++. ..-||++.|.+.|.+-. -.+.+.+.+.
T Consensus 100 -----~G~~~a~N~g~~~----A~gd~i~flD~D~~~~p~~L~~ll~~~~ 140 (472)
T 1xhb_A 100 -----SGLIRARLKGAAV----SRGQVITFLDAHCECTAGWLEPLLARIK 140 (472)
T ss_dssp -----CCHHHHHHHHHHH----CCSSEEEEEESSEEECTTCHHHHHHHHH
T ss_pred -----CChHHHHHHHHHh----ccCCeEEEECCCeEeCccHHHHHHHHHH
Confidence 2245555554444 34699999999988532 2344555554
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=58.97 E-value=58 Score=33.54 Aligned_cols=100 Identities=13% Similarity=0.138 Sum_probs=61.8
Q ss_pred CCCeEEEEEEecCCCHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeecC
Q 015224 54 YPVTFAYLLSASKGDTIKLKRALLALYHP--GNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRG 131 (411)
Q Consensus 54 ~~~kiAyLI~~hk~d~~~l~rLl~aLy~p--~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg 131 (411)
..|+++.+|.+++ ..+.+.+.|+.+... .+.=+|-||-.+++...+.++++.+ ..++|.++... -.|
T Consensus 373 ~~~~vsiii~~yn-~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~------~~~~i~~~~~~----n~G 441 (625)
T 2z86_A 373 RVPLVSIYIPAYN-CSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYA------NHPRVRFISQK----NKG 441 (625)
T ss_dssp SSCSEEEEEEESS-CTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHT------TCTTEEEEEEC----CCC
T ss_pred cCCeEEEEEeCCC-CHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHh------hCCcEEEEeCC----CCC
Confidence 3578999999998 578899999888531 2333455666566554555554432 35678887422 234
Q ss_pred ccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccChhhHHH
Q 015224 132 PTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVTQDDLIE 172 (411)
Q Consensus 132 ~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt~~~i~~ 172 (411)
...|.-.+++ ...-||+..|.+.|++ ..+.|..
T Consensus 442 --~~~a~n~g~~----~a~g~~i~~ld~D~~~--~~~~l~~ 474 (625)
T 2z86_A 442 --IGSASNTAVR----LCRGFYIGQLDSDDFL--EPDAVEL 474 (625)
T ss_dssp --HHHHHHHHHH----HCCSSEEEECCTTCEE--CTTHHHH
T ss_pred --HHHHHHHHHH----hcCCCEEEEECCCccc--ChhHHHH
Confidence 3333333333 3356999999999986 3444433
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=49.89 E-value=61 Score=32.52 Aligned_cols=101 Identities=9% Similarity=0.112 Sum_probs=61.8
Q ss_pred CCCCeEEEEEEecCCCHH-HHHHHHHHHc--CCCC--EEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceee
Q 015224 53 SYPVTFAYLLSASKGDTI-KLKRALLALY--HPGN--HYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLV 127 (411)
Q Consensus 53 ~~~~kiAyLI~~hk~d~~-~l~rLl~aLy--~p~n--~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V 127 (411)
...|++..+|.+|+ ..+ .|.+.|+.+. .+.+ .=+|-||-.|++..... .+ ...++|+++....
T Consensus 63 ~~~p~vSVIIp~yN-~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~---~~------~~~~~v~vi~~~~-- 130 (501)
T 2ffu_A 63 VDLPATSVVITFHN-EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGA---LL------GKIEKVRVLRNDR-- 130 (501)
T ss_dssp SSCCCEEEEEEESS-CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHH---GG------GGBTTEEEEECSS--
T ss_pred cCCCCEEEEEEeCc-CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHH---HH------hcCCCEEEEECCC--
Confidence 35678999999998 455 7888888874 2222 23566777666543222 12 2467888875221
Q ss_pred eecCccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccChhhHHHHH
Q 015224 128 TYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVTQDDLIEAF 174 (411)
Q Consensus 128 ~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt~~~i~~~f 174 (411)
......|-..+++.+ .-||++.|.+.|.+ +.+.|...+
T Consensus 131 ---n~G~~~A~N~G~~~A----~gd~i~flD~D~~~--~p~~L~~ll 168 (501)
T 2ffu_A 131 ---REGLMRSRVRGADAA----QAKVLTFLDSHCEC--NEHWLEPLL 168 (501)
T ss_dssp ---CCHHHHHHHHHHHHC----CSSEEEECCSSEEE--CTTCHHHHH
T ss_pred ---CcCHHHHHHHHHHhc----CCCEEEEECCCccc--CccHHHHHH
Confidence 223555555555543 46999999998876 344444333
No 11
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=44.21 E-value=1e+02 Score=26.94 Aligned_cols=90 Identities=21% Similarity=0.184 Sum_probs=50.2
Q ss_pred HHHHHHHHHHcC-C-CCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeecCccHHHHHHHHHHHHHh
Q 015224 70 IKLKRALLALYH-P-GNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRGPTMLATTLHAIAMLLR 147 (411)
Q Consensus 70 ~~l~rLl~aLy~-p-~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg~S~V~AtL~~~~~lL~ 147 (411)
..+.+.++++.. + -..++|-.+. . + ++++++ .+ ++.++........+|.++..+..++++.+ .
T Consensus 30 pll~~~l~~~~~~~~~~~ivvv~~~---~-~---i~~~~~------~~-~~~~~~~~~~~~~~~~g~~~sv~~~l~~~-~ 94 (228)
T 1ezi_A 30 SLLGHTINAAISSKCFDRIIVSTDG---G-L---IAEEAK------NF-GVEVVLRPAELASDTASSISGVIHALETI-G 94 (228)
T ss_dssp EHHHHHHHHHHHHCCCSEEEEEESC---H-H---HHHHHH------HT-TCEEEECCC------CHHHHHHHHHHHHH-T
T ss_pred CHHHHHHHHHHhCCCCCEEEEECCC---H-H---HHHHHH------Hc-CCEEEeCchHHcCCCCChHHHHHHHHHHh-C
Confidence 577777777752 3 2456666652 2 1 222222 11 23333323334456777888877777766 2
Q ss_pred CCCCcEEEEccCCcccccChhhHHHHHhc
Q 015224 148 CCKWDWFINLSASDYPLVTQDDLIEAFSD 176 (411)
Q Consensus 148 ~~~wdyfi~LSgsDyPLkt~~~i~~~fs~ 176 (411)
...|+++.+ ..|.|+.+.+.|.+.+..
T Consensus 95 -~~~d~vlv~-~~D~P~~~~~~i~~l~~~ 121 (228)
T 1ezi_A 95 -SNSGTVTLL-QPTSPLRTGAHIREAFSL 121 (228)
T ss_dssp -CCSEEEEEC-CTTCTTCCHHHHHHHHTT
T ss_pred -CCCCEEEEE-cCCCCcCCHHHHHHHHHH
Confidence 236777655 569999999999888764
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=38.46 E-value=1.7e+02 Score=27.35 Aligned_cols=77 Identities=12% Similarity=0.062 Sum_probs=49.7
Q ss_pred CCCeEEEEEEecCCCHHHHHHHHHHHc------CCCCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceee
Q 015224 54 YPVTFAYLLSASKGDTIKLKRALLALY------HPGNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLV 127 (411)
Q Consensus 54 ~~~kiAyLI~~hk~d~~~l~rLl~aLy------~p~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V 127 (411)
+.++++.+|.+++ ..+.|.++|+.|. .++.. +|-||-.. +
T Consensus 63 ~~~~VSIIIP~yN-~~~~L~~~L~sl~~~l~q~~~~~E-IiVVdds~-d------------------------------- 108 (287)
T 2fy7_A 63 SPHKVAIIIPFRN-RQEHLKYWLYYLHPVLQRQQLDYG-IYVINQAG-D------------------------------- 108 (287)
T ss_dssp CSCEEEEEEEESS-CHHHHHHHHHHHHHHHHHTTCEEE-EEEEEECS-S-------------------------------
T ss_pred cCCcEEEEEeeCC-CHHHHHHHHHHHHHHHHHhcCCce-EEEEEeCC-C-------------------------------
Confidence 4579999999998 6899999999886 11111 22233211 0
Q ss_pred eecCccHHHHHHHHHHHHHhCCCCcEEEEccCCcccccC
Q 015224 128 TYRGPTMLATTLHAIAMLLRCCKWDWFINLSASDYPLVT 166 (411)
Q Consensus 128 ~Wgg~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPLkt 166 (411)
+++....|.=.++..+++.+..||++.|.+.+.|...
T Consensus 109 --~~f~~a~a~N~G~~~al~~A~gd~i~flD~D~i~~~d 145 (287)
T 2fy7_A 109 --TIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMND 145 (287)
T ss_dssp --SCCCHHHHHHHHHHHHHHHSCCCEEEEECTTEEESBT
T ss_pred --CccchhhhhhhHHHHHHHhCCCCEEEEECCCcccCCC
Confidence 1223333333445456666679999999999998776
No 13
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=29.72 E-value=1.8e+02 Score=25.60 Aligned_cols=25 Identities=20% Similarity=0.222 Sum_probs=18.9
Q ss_pred CCcEEEEccCCcccccChhhHHHHHh
Q 015224 150 KWDWFINLSASDYPLVTQDDLIEAFS 175 (411)
Q Consensus 150 ~wdyfi~LSgsDyPLkt~~~i~~~fs 175 (411)
..|+++.+. .|.|+.+.+.|.+.+.
T Consensus 94 ~~d~vlv~~-~D~Pli~~~~i~~l~~ 118 (229)
T 1qwj_A 94 EVDIVGNIQ-ATSPCLHPTDLQKVAE 118 (229)
T ss_dssp TCSEEEEEC-TTCTTCCHHHHHHHHH
T ss_pred CCCEEEEec-CCCCcCCHHHHHHHHH
Confidence 368877775 5999998888777664
No 14
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=22.23 E-value=3.2e+02 Score=25.40 Aligned_cols=116 Identities=11% Similarity=0.048 Sum_probs=64.1
Q ss_pred CCCeEEEEEEecCCCHHHHHHHHHHHcC---CCCEEEEEEeCCCCHHHHHHHHHHhhccccccccccEEEeCCceeeeec
Q 015224 54 YPVTFAYLLSASKGDTIKLKRALLALYH---PGNHYLIHMDREAPEKEQREIAEFVANEPVFRMVNNVYIVGKPNLVTYR 130 (411)
Q Consensus 54 ~~~kiAyLI~~hk~d~~~l~rLl~aLy~---p~n~y~IHvD~ka~~~~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wg 130 (411)
..|++..+|-+++ ..+.|.++|+.+.. +...=+|-||-.|++...+.++++.. ....++.++.. . -.-.
T Consensus 46 ~~~~vSViIp~yN-~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~-----~~~~~~~~~~~-~-~~n~ 117 (329)
T 3ckj_A 46 AGRTISVVLPALD-EEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGA-----RVVSREQALPE-V-PIRP 117 (329)
T ss_dssp TTCCEEEEEEESS-CTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTC-----EEEEHHHHCTT-S-CCCC
T ss_pred cCCcEEEEEeeCC-CHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhh-----hhccceeeecc-C-CCCC
Confidence 4588999999998 67889999888863 43233455787776654444443210 00122222210 1 1123
Q ss_pred CccHHHHHHHHHHHHHhCCCCcEEEEccCCcccc--cChhhHHHHHhcCCCCcceE
Q 015224 131 GPTMLATTLHAIAMLLRCCKWDWFINLSASDYPL--VTQDDLIEAFSDLPRDLNFI 184 (411)
Q Consensus 131 g~S~V~AtL~~~~~lL~~~~wdyfi~LSgsDyPL--kt~~~i~~~fs~~~~~~nFI 184 (411)
| ...|.-.+++. ..-||++.|.+.|..+ .....+.+.+.. +.+...+
T Consensus 118 G--~~~a~n~g~~~----a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~-~~~~~~v 166 (329)
T 3ckj_A 118 G--KGEALWRSLAA----SRGDIVVFVDSDLINPHPMFVPWLVGPLLT-GDGVHLV 166 (329)
T ss_dssp S--HHHHHHHHHHH----CCCSEEEECCTTEESCCTTHHHHHHHHHHS-CSSCCEE
T ss_pred C--HHHHHHHHHHh----CCCCEEEEECCCCCCcChHHHHHHHHHHHh-CCCccEE
Confidence 3 34444444433 3469999999999833 334566666532 3334444
No 15
>3gx1_A LIN1832 protein; APC63308.2, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Listeria innocua CLIP11262}
Probab=20.87 E-value=3.5e+02 Score=22.14 Aligned_cols=93 Identities=12% Similarity=0.074 Sum_probs=60.6
Q ss_pred eEEEEEEecCC-CHHHHHHHHHHHcCCCCEEEEEEeCCCCHH-HHHHHHHHhhccccccccccEEEeCCceeeeecCccH
Q 015224 57 TFAYLLSASKG-DTIKLKRALLALYHPGNHYLIHMDREAPEK-EQREIAEFVANEPVFRMVNNVYIVGKPNLVTYRGPTM 134 (411)
Q Consensus 57 kiAyLI~~hk~-d~~~l~rLl~aLy~p~n~y~IHvD~ka~~~-~~~~l~~~v~~~~~~~~~~NV~vv~~r~~V~Wgg~S~ 134 (411)
++..+|.+|.. =...+....+.+..+.+...|=+....+.+ ..+++.+.++... ....|-|+-+- |.++.
T Consensus 4 ~igiiivsHG~~~A~~l~~~a~~i~G~~~~~aid~~~~~~~~~~~~~i~~~i~~~d---~~~GVLiL~Dm-----GSp~n 75 (130)
T 3gx1_A 4 QVEVIVMMHGRSTATSMVETVQELLSIESGIALDMPLTVEVKAMYEKLKQTVVKLN---PVKGVLILSDM-----GSLTS 75 (130)
T ss_dssp SCEEEEEEESSSHHHHHHHHHHHHHTCCCCEEEEECTTSCHHHHHHHHHHHHHTSC---CTTCEEEEECS-----GGGGT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHHHcCccCEEEEEecCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEeC-----CCHHH
Confidence 46788999984 368899999998877777777666665544 4677777775422 24567776432 88877
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEccCCcccc
Q 015224 135 LATTLHAIAMLLRCCKWDWFINLSASDYPL 164 (411)
Q Consensus 135 V~AtL~~~~~lL~~~~wdyfi~LSgsDyPL 164 (411)
+...+.. . . . .-+..++|-..|+
T Consensus 76 ~a~~l~~--~-~--~--~~v~vI~gvnlpm 98 (130)
T 3gx1_A 76 FGNILTE--E-L--G--IRTKTVTMVSTPV 98 (130)
T ss_dssp HHHHHHH--H-H--C--CCEEEECSCCHHH
T ss_pred HHHHHHH--h-c--C--CCEEEEeCCCHHH
Confidence 7664431 1 0 1 1256678888875
No 16
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=20.19 E-value=29 Score=34.65 Aligned_cols=46 Identities=17% Similarity=0.057 Sum_probs=35.7
Q ss_pred CCCeEEEE--EEecCCCHHHHHHHHHHHcCCCCEEEEEEeCCCCHHHHHHHH
Q 015224 54 YPVTFAYL--LSASKGDTIKLKRALLALYHPGNHYLIHMDREAPEKEQREIA 103 (411)
Q Consensus 54 ~~~kiAyL--I~~hk~d~~~l~rLl~aLy~p~n~y~IHvD~ka~~~~~~~l~ 103 (411)
-.+++.++ .+||. |..+|.++++.+. +.++||=|.++....++.|+
T Consensus 367 v~a~v~~~~~~saHa-d~~~l~~~~~~~~---~v~lvHge~~~~~~l~~~l~ 414 (431)
T 3iek_A 367 LRASVHTLGGFSGHA-GQDELLDWLQGEP---RVVLVHGEEEKLLALGKLLA 414 (431)
T ss_dssp CCSEEEECGGGCSSC-CHHHHHHHHTTCS---EEEEESSCHHHHHHHHHHHH
T ss_pred EEEEEEEECCccccC-CHHHHHHHHHhCC---eEEEECCCHHHHHHHHHHHH
Confidence 45788887 89999 9999999999763 79999987766555555554
Done!