Query 015225
Match_columns 411
No_of_seqs 198 out of 2629
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 08:52:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015225.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015225hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3brk_X Glucose-1-phosphate ade 100.0 3.3E-48 1.1E-52 381.4 29.1 344 1-393 10-392 (420)
2 1yp2_A Glucose-1-phosphate ade 100.0 4.8E-48 1.7E-52 383.9 28.3 365 1-401 18-451 (451)
3 3st8_A Bifunctional protein GL 100.0 7.9E-47 2.7E-51 379.4 30.7 373 3-409 12-452 (501)
4 2ggo_A 401AA long hypothetical 100.0 1.7E-46 5.6E-51 367.5 28.1 357 4-409 1-397 (401)
5 4fce_A Bifunctional protein GL 100.0 5.6E-44 1.9E-48 355.7 27.2 362 2-409 7-438 (459)
6 1hm9_A GLMU, UDP-N-acetylgluco 100.0 1.9E-43 6.6E-48 352.6 29.3 342 4-399 12-367 (468)
7 2v0h_A Bifunctional protein GL 100.0 4.9E-42 1.7E-46 341.4 26.3 343 2-399 4-359 (456)
8 3juk_A UDP-glucose pyrophospho 100.0 5.6E-36 1.9E-40 278.7 18.0 240 3-274 2-272 (281)
9 4ecm_A Glucose-1-phosphate thy 100.0 1.1E-34 3.7E-39 268.1 20.4 236 3-273 24-260 (269)
10 2e3d_A UTP--glucose-1-phosphat 100.0 1E-32 3.4E-37 259.3 20.3 239 2-273 7-282 (302)
11 2ux8_A Glucose-1-phosphate uri 100.0 8.7E-33 3E-37 259.1 17.8 242 2-274 13-281 (297)
12 1fxo_A Glucose-1-phosphate thy 100.0 4.6E-32 1.6E-36 252.9 20.5 236 3-272 2-241 (293)
13 1lvw_A Glucose-1-phosphate thy 100.0 1.2E-31 4.3E-36 250.0 22.7 236 3-272 3-242 (295)
14 3pnn_A Conserved domain protei 100.0 2.3E-32 7.8E-37 256.5 16.8 242 1-274 3-293 (303)
15 1mc3_A Glucose-1-phosphate thy 100.0 5.1E-32 1.8E-36 252.7 18.4 237 3-273 3-243 (296)
16 1tzf_A Glucose-1-phosphate cyt 100.0 1.4E-31 4.7E-36 246.0 17.9 229 3-272 2-250 (259)
17 4evw_A Nucleoside-diphosphate- 100.0 2.2E-31 7.6E-36 243.4 16.1 229 6-268 2-243 (255)
18 2pa4_A UTP-glucose-1-phosphate 100.0 2.1E-31 7.1E-36 252.4 16.1 242 2-272 11-282 (323)
19 2qh5_A PMI, ALGA, mannose-6-ph 100.0 4.3E-29 1.5E-33 234.9 18.1 250 1-269 1-281 (308)
20 1jyk_A LICC protein, CTP:phosp 99.9 1.1E-27 3.9E-32 218.9 12.6 224 3-271 25-251 (254)
21 3oam_A 3-deoxy-manno-octuloson 99.9 7.7E-27 2.6E-31 213.2 17.0 228 3-273 2-250 (252)
22 2x65_A Mannose-1-phosphate gua 99.9 1.4E-26 4.8E-31 219.7 14.0 236 4-266 2-270 (336)
23 2cu2_A Putative mannose-1-phos 99.9 3.2E-26 1.1E-30 217.3 13.5 234 1-267 1-266 (337)
24 3tqd_A 3-deoxy-manno-octuloson 99.9 1.1E-24 3.7E-29 198.4 16.1 225 2-268 8-254 (256)
25 3k8d_A 3-deoxy-manno-octuloson 99.9 2.6E-24 9E-29 196.7 16.7 224 2-268 17-261 (264)
26 4fcu_A 3-deoxy-manno-octuloson 99.9 1.9E-22 6.4E-27 183.4 17.2 225 4-273 2-251 (253)
27 2xme_A CTP-inositol-1-phosphat 99.9 1.4E-22 4.8E-27 182.7 14.7 213 1-268 16-230 (232)
28 1vic_A 3-deoxy-manno-octuloson 99.9 1E-21 3.5E-26 180.4 19.1 227 3-272 2-253 (262)
29 2y6p_A 3-deoxy-manno-octuloson 99.9 7.3E-22 2.5E-26 178.2 17.1 220 3-269 2-230 (234)
30 1h7e_A 3-deoxy-manno-octuloson 99.9 1.5E-21 5.2E-26 177.4 18.4 224 3-273 2-240 (245)
31 2icy_A Probable UTP-glucose-1- 99.8 3.4E-19 1.2E-23 174.0 21.4 189 2-198 78-310 (469)
32 3f1c_A Putative 2-C-methyl-D-e 99.8 9.4E-20 3.2E-24 165.6 15.2 227 1-274 1-236 (246)
33 2vsh_A TARI, 2-C-methyl-D-eryt 99.8 5.5E-20 1.9E-24 166.0 12.0 219 4-269 3-232 (236)
34 1ezi_A CMP-N-acetylneuraminic 99.8 8.1E-20 2.8E-24 164.2 12.4 205 3-270 4-223 (228)
35 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.8 2.1E-19 7.1E-24 173.1 13.7 75 109-193 11-89 (374)
36 2dpw_A Hypothetical protein TT 99.8 3.6E-20 1.2E-24 166.8 4.9 221 3-264 2-231 (232)
37 2xwl_A 2-C-methyl-D-erythritol 99.8 9E-19 3.1E-23 156.6 14.0 212 3-270 2-218 (223)
38 2yc3_A 2-C-methyl-D-erythritol 99.8 5.5E-19 1.9E-23 158.7 12.4 219 1-270 2-224 (228)
39 1vgw_A 4-diphosphocytidyl-2C-m 99.8 3.8E-18 1.3E-22 153.5 13.4 214 3-268 6-226 (231)
40 2i5k_A UTP--glucose-1-phosphat 99.8 4E-17 1.4E-21 160.4 21.7 184 3-197 92-322 (488)
41 1qwj_A Cytidine monophospho-N- 99.7 9.9E-18 3.4E-22 150.5 13.2 205 3-272 3-222 (229)
42 2waw_A MOBA relate protein; un 99.7 3.3E-17 1.1E-21 143.6 14.7 122 1-138 1-126 (199)
43 1i52_A 4-diphosphocytidyl-2-C- 99.7 5.3E-17 1.8E-21 146.5 13.1 217 1-271 5-228 (236)
44 1vpa_A 2-C-methyl-D-erythritol 99.7 3.6E-16 1.2E-20 140.8 17.8 209 3-270 13-227 (234)
45 3c8v_A Putative acetyltransfer 99.7 5.2E-18 1.8E-22 166.5 5.0 263 77-406 111-398 (496)
46 2wee_A MOBA-related protein; u 99.7 6.2E-17 2.1E-21 141.7 11.1 115 1-130 1-120 (197)
47 3r8y_A 2,3,4,5-tetrahydropyrid 99.7 4.8E-17 1.6E-21 147.0 10.6 148 241-401 37-208 (240)
48 3q80_A 2-C-methyl-D-erythritol 99.7 7.8E-16 2.7E-20 137.8 15.8 217 3-269 7-228 (231)
49 1e5k_A Molybdopterin-guanine d 99.7 5.7E-16 1.9E-20 136.1 12.5 109 1-130 4-116 (201)
50 2e8b_A Probable molybdopterin- 99.7 9.7E-17 3.3E-21 141.1 7.2 178 1-269 12-197 (201)
51 1jv1_A Glcnac1P uridyltransfer 99.7 3E-15 1E-19 147.7 17.9 188 2-198 101-344 (505)
52 2px7_A 2-C-methyl-D-erythritol 99.6 5.8E-16 2E-20 139.6 11.5 202 4-270 26-231 (236)
53 3mqg_A Lipopolysaccharides bio 99.6 3.6E-15 1.2E-19 130.0 15.5 121 289-409 8-143 (192)
54 3vbi_A ANTD, galactoside O-ace 99.6 3E-15 1E-19 131.9 13.8 66 298-363 34-106 (205)
55 3kwd_A Carbon dioxide concentr 99.6 7.3E-15 2.5E-19 130.2 15.0 105 289-403 50-174 (213)
56 1xhd_A Putative acetyltransfer 99.6 4.6E-15 1.6E-19 127.1 13.2 105 289-402 23-136 (173)
57 3rsb_A Adenosylcobinamide-phos 99.6 4.3E-16 1.5E-20 136.3 6.8 129 4-145 1-136 (196)
58 1v3w_A Ferripyochelin binding 99.6 4.4E-15 1.5E-19 127.1 12.4 104 289-401 21-133 (173)
59 3d5n_A Q97W15_sulso; NESG, SSR 99.6 2.3E-15 7.9E-20 131.8 10.8 114 1-137 1-117 (197)
60 3r3r_A Ferripyochelin binding 99.6 4.6E-15 1.6E-19 128.7 12.3 106 289-403 26-147 (187)
61 3tv0_A Dynactin subunit 6; LEF 99.6 1E-14 3.5E-19 127.3 14.5 106 289-403 23-149 (194)
62 3tv0_A Dynactin subunit 6; LEF 99.6 1.3E-14 4.5E-19 126.6 15.0 113 292-409 8-145 (194)
63 3ixc_A Hexapeptide transferase 99.6 6.5E-15 2.2E-19 128.2 12.6 104 290-402 45-158 (191)
64 1xhd_A Putative acetyltransfer 99.6 1.3E-14 4.4E-19 124.2 14.1 104 295-408 11-132 (173)
65 3ixc_A Hexapeptide transferase 99.6 6.4E-15 2.2E-19 128.2 12.2 105 294-408 31-154 (191)
66 2pig_A Putative transferase; S 99.6 8.9E-15 3E-19 137.1 13.8 145 254-402 26-189 (334)
67 1w55_A ISPD/ISPF bifunctional 99.6 5.6E-15 1.9E-19 140.9 12.0 124 1-145 1-126 (371)
68 1qre_A Carbonic anhydrase; bet 99.6 2.4E-14 8.3E-19 129.7 15.3 104 289-402 70-202 (247)
69 4e6u_A Acyl-[acyl-carrier-prot 99.6 3.1E-14 1.1E-18 130.5 16.0 120 290-409 31-187 (265)
70 3r1w_A Carbonic anhydrase; bet 99.6 1.2E-14 4.1E-19 126.4 12.3 106 289-403 30-151 (189)
71 3r0s_A Acyl-[acyl-carrier-prot 99.6 3.4E-14 1.2E-18 130.2 15.9 120 290-409 28-185 (266)
72 3hsq_A Acyl-[acyl-carrier-prot 99.6 3.3E-14 1.1E-18 129.9 15.1 111 290-409 24-180 (259)
73 4eqy_A Acyl-[acyl-carrier-prot 99.6 4.8E-14 1.6E-18 130.4 15.4 120 290-409 46-202 (283)
74 3bfp_A Acetyltransferase; LEFT 99.6 7.4E-14 2.5E-18 121.8 15.6 92 290-390 81-176 (194)
75 3vbi_A ANTD, galactoside O-ace 99.6 2E-14 7E-19 126.6 12.1 104 289-402 43-178 (205)
76 3r3r_A Ferripyochelin binding 99.6 3.6E-14 1.2E-18 123.1 13.3 103 296-408 15-142 (187)
77 1j2z_A Acyl-[acyl-carrier-prot 99.6 5.4E-14 1.9E-18 129.0 15.0 119 291-409 26-181 (270)
78 1v3w_A Ferripyochelin binding 99.5 7.9E-14 2.7E-18 119.3 13.9 103 296-408 10-130 (173)
79 4ea9_A Perosamine N-acetyltran 99.5 1.2E-13 4E-18 123.1 15.4 93 290-391 105-199 (220)
80 3r1w_A Carbonic anhydrase; bet 99.5 6.3E-14 2.2E-18 121.7 13.3 103 296-408 19-146 (189)
81 3mqg_A Lipopolysaccharides bio 99.5 1E-13 3.5E-18 120.7 14.7 103 290-402 27-146 (192)
82 3r8y_A 2,3,4,5-tetrahydropyrid 99.5 7.4E-14 2.5E-18 126.0 13.9 111 298-409 87-206 (240)
83 2qia_A UDP-N-acetylglucosamine 99.5 1.2E-13 4E-18 126.4 14.9 120 290-409 29-185 (262)
84 3eg4_A 2,3,4,5-tetrahydropyrid 99.5 6.4E-14 2.2E-18 129.9 13.0 92 291-391 130-236 (304)
85 3ngw_A Molybdopterin-guanine d 99.5 1.8E-13 6.3E-18 120.4 15.1 114 4-139 1-116 (208)
86 3gos_A 2,3,4,5-tetrahydropyrid 99.5 7E-14 2.4E-18 128.3 12.9 106 291-406 111-241 (276)
87 3kwd_A Carbon dioxide concentr 99.5 1.6E-13 5.5E-18 121.5 14.7 98 295-401 38-161 (213)
88 3fs8_A QDTC; acetyltransferase 99.5 2.8E-13 9.4E-18 124.8 16.4 78 289-366 13-106 (273)
89 1j2z_A Acyl-[acyl-carrier-prot 99.5 3.3E-13 1.1E-17 123.7 15.9 78 289-366 6-97 (270)
90 4e79_A UDP-3-O-acylglucosamine 99.5 2.5E-13 8.7E-18 129.4 15.5 33 376-408 264-304 (357)
91 4ea9_A Perosamine N-acetyltran 99.5 2.5E-13 8.6E-18 120.9 14.3 105 291-409 100-206 (220)
92 3hsq_A Acyl-[acyl-carrier-prot 99.5 4E-13 1.4E-17 122.6 15.8 78 289-366 5-97 (259)
93 3bfp_A Acetyltransferase; LEFT 99.5 3.2E-13 1.1E-17 117.7 14.4 105 291-409 76-184 (194)
94 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 1.7E-13 5.8E-18 127.4 12.9 108 290-406 145-282 (316)
95 3t57_A UDP-N-acetylglucosamine 99.5 3.9E-13 1.3E-17 125.6 15.4 36 375-410 168-210 (305)
96 3fs8_A QDTC; acetyltransferase 99.5 4.1E-13 1.4E-17 123.6 15.2 120 290-409 82-211 (273)
97 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 6.4E-13 2.2E-17 126.0 16.7 32 375-406 258-296 (341)
98 3r0s_A Acyl-[acyl-carrier-prot 99.5 7.6E-13 2.6E-17 121.2 16.6 78 289-366 9-101 (266)
99 4e79_A UDP-3-O-acylglucosamine 99.5 5.6E-13 1.9E-17 127.0 15.5 73 291-363 109-183 (357)
100 2qia_A UDP-N-acetylglucosamine 99.5 8.9E-13 3E-17 120.6 16.3 99 290-390 11-123 (262)
101 3eh0_A UDP-3-O-[3-hydroxymyris 99.5 9.7E-13 3.3E-17 124.8 17.0 75 290-364 103-179 (341)
102 4eqy_A Acyl-[acyl-carrier-prot 99.5 6.5E-13 2.2E-17 122.8 15.3 78 289-366 27-118 (283)
103 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1.1E-12 3.6E-17 125.6 16.8 34 375-408 280-321 (372)
104 3tk8_A 2,3,4,5-tetrahydropyrid 99.5 4.9E-13 1.7E-17 124.3 13.8 16 233-248 74-90 (316)
105 4e6u_A Acyl-[acyl-carrier-prot 99.5 1.2E-12 4E-17 120.0 15.6 78 289-366 12-103 (265)
106 2oeg_A UTP-glucose-1-phosphate 99.5 6E-13 2.1E-17 130.5 14.4 185 3-197 75-322 (505)
107 2ggo_A 401AA long hypothetical 99.4 5.2E-13 1.8E-17 129.9 13.3 93 289-391 237-330 (401)
108 2v0h_A Bifunctional protein GL 99.4 6.1E-13 2.1E-17 131.6 14.0 118 289-409 276-435 (456)
109 3pmo_A UDP-3-O-[3-hydroxymyris 99.4 1.8E-12 6.1E-17 124.1 16.7 18 348-365 222-239 (372)
110 1qre_A Carbonic anhydrase; bet 99.4 1.2E-12 4.1E-17 118.5 14.3 97 296-401 59-190 (247)
111 3c8v_A Putative acetyltransfer 99.4 6.5E-13 2.2E-17 130.4 13.0 98 295-402 272-380 (496)
112 3t57_A UDP-N-acetylglucosamine 99.4 2E-12 6.9E-17 120.7 15.7 56 291-346 14-70 (305)
113 1hm9_A GLMU, UDP-N-acetylgluco 99.4 7.6E-13 2.6E-17 131.4 13.3 34 376-409 403-443 (468)
114 3gos_A 2,3,4,5-tetrahydropyrid 99.4 1.3E-12 4.5E-17 119.8 13.8 102 290-401 104-216 (276)
115 3jqy_B NEUO, polysialic acid O 99.4 5.3E-13 1.8E-17 121.2 10.9 88 295-391 84-197 (252)
116 3eg4_A 2,3,4,5-tetrahydropyrid 99.4 1.4E-12 4.8E-17 120.9 13.5 99 296-404 158-269 (304)
117 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.4 2E-12 7E-17 124.2 14.9 53 313-365 171-245 (374)
118 3r5d_A Tetrahydrodipicolinate 99.4 5.3E-13 1.8E-17 122.1 9.5 97 289-396 183-294 (347)
119 3q1x_A Serine acetyltransferas 99.4 6.9E-13 2.4E-17 122.7 9.4 91 290-390 163-256 (313)
120 3jqy_B NEUO, polysialic acid O 99.4 1.3E-12 4.4E-17 118.7 11.0 115 295-409 62-204 (252)
121 3fsy_A Tetrahydrodipicolinate 99.4 1.4E-12 4.7E-17 118.5 10.4 105 288-403 159-280 (332)
122 2wlg_A Polysialic acid O-acety 99.4 2.2E-12 7.6E-17 114.3 11.7 112 297-408 37-177 (215)
123 2wlg_A Polysialic acid O-acety 99.4 4E-12 1.4E-16 112.6 11.9 96 297-402 59-181 (215)
124 3nz2_A Hexapeptide-repeat cont 99.3 4.9E-12 1.7E-16 110.2 11.3 71 311-390 73-165 (195)
125 3oc9_A UDP-N-acetylglucosamine 99.3 3E-11 1E-15 114.9 17.6 185 3-196 35-275 (405)
126 2yqc_A UDP-N-acetylglucosamine 99.3 1.5E-11 5.2E-16 120.9 15.9 186 3-197 103-352 (486)
127 3r5d_A Tetrahydrodipicolinate 99.3 1.6E-12 5.3E-17 119.0 8.0 107 298-406 180-292 (347)
128 3hjj_A Maltose O-acetyltransfe 99.3 1.8E-11 6.1E-16 106.2 13.8 70 313-391 77-168 (190)
129 3f1x_A Serine acetyltransferas 99.3 9.4E-12 3.2E-16 114.8 11.9 94 296-404 190-297 (310)
130 3ftt_A Putative acetyltransfer 99.3 7.9E-12 2.7E-16 109.2 10.4 70 314-392 74-165 (199)
131 3fsy_A Tetrahydrodipicolinate 99.3 3.5E-12 1.2E-16 115.8 8.2 108 297-406 156-269 (332)
132 4fce_A Bifunctional protein GL 99.3 1.6E-11 5.5E-16 121.4 13.8 62 333-404 374-443 (459)
133 2pig_A Putative transferase; S 99.3 1.6E-11 5.4E-16 115.1 12.2 93 289-392 76-196 (334)
134 3st8_A Bifunctional protein GL 99.3 2.3E-11 7.9E-16 121.6 13.5 106 289-405 345-458 (501)
135 3mc4_A WW/RSP5/WWP domain:bact 99.3 3.1E-11 1.1E-15 109.9 12.8 81 290-390 164-249 (287)
136 3srt_A Maltose O-acetyltransfe 99.3 2.5E-11 8.6E-16 105.0 11.4 71 313-392 75-167 (188)
137 2p2o_A Maltose transacetylase; 99.3 1.4E-11 4.8E-16 106.1 9.5 79 314-402 74-174 (185)
138 1ocx_A Maltose O-acetyltransfe 99.3 2.1E-11 7.3E-16 104.7 9.9 80 313-402 71-172 (182)
139 3mc4_A WW/RSP5/WWP domain:bact 99.2 2.7E-11 9.1E-16 110.3 10.9 78 289-366 169-252 (287)
140 2rij_A Putative 2,3,4,5-tetrah 99.2 1.3E-11 4.5E-16 116.3 8.7 138 247-396 165-328 (387)
141 3nz2_A Hexapeptide-repeat cont 99.2 2.4E-11 8.2E-16 105.8 9.6 75 291-365 71-167 (195)
142 1krr_A Galactoside O-acetyltra 99.2 5E-11 1.7E-15 103.9 11.1 78 313-400 74-173 (203)
143 3q1x_A Serine acetyltransferas 99.2 6.2E-11 2.1E-15 109.6 12.0 98 293-409 160-264 (313)
144 1ssq_A SAT, serine acetyltrans 99.2 1.4E-10 4.8E-15 104.9 13.9 28 108-135 19-48 (267)
145 4hur_A Virginiamycin A acetylt 99.2 4E-11 1.4E-15 106.4 9.9 100 292-401 25-162 (220)
146 3f1x_A Serine acetyltransferas 99.2 9.4E-11 3.2E-15 108.2 12.3 77 290-366 190-287 (310)
147 1ssq_A SAT, serine acetyltrans 99.2 1.3E-10 4.6E-15 105.0 13.0 76 290-365 137-224 (267)
148 1t3d_A SAT, serine acetyltrans 99.2 2E-10 6.9E-15 104.8 13.9 28 108-135 39-68 (289)
149 1yp2_A Glucose-1-phosphate ade 99.2 4.2E-11 1.4E-15 118.2 10.2 89 290-391 308-415 (451)
150 1t3d_A SAT, serine acetyltrans 99.2 2.3E-10 8E-15 104.3 13.0 81 290-390 157-242 (289)
151 3hjj_A Maltose O-acetyltransfe 99.1 3.7E-10 1.3E-14 97.8 12.5 72 294-365 76-169 (190)
152 3ftt_A Putative acetyltransfer 99.1 5.9E-10 2E-14 97.2 13.2 73 294-366 72-166 (199)
153 3srt_A Maltose O-acetyltransfe 99.1 3.7E-10 1.3E-14 97.6 10.6 73 294-366 74-168 (188)
154 1krr_A Galactoside O-acetyltra 99.1 3.9E-10 1.3E-14 98.3 10.0 72 294-365 73-166 (203)
155 1ocx_A Maltose O-acetyltransfe 99.1 9.1E-10 3.1E-14 94.4 11.4 72 294-365 70-163 (182)
156 2p2o_A Maltose transacetylase; 99.1 5.1E-10 1.7E-14 96.3 9.8 73 293-365 71-165 (185)
157 4hur_A Virginiamycin A acetylt 99.0 3.2E-10 1.1E-14 100.6 7.9 32 376-407 120-158 (220)
158 3brk_X Glucose-1-phosphate ade 99.0 1.4E-09 4.9E-14 106.1 10.2 89 304-404 298-386 (420)
159 2rij_A Putative 2,3,4,5-tetrah 99.0 6.2E-10 2.1E-14 104.9 7.2 102 302-407 217-327 (387)
160 4e8l_A Virginiamycin A acetylt 98.9 3.3E-09 1.1E-13 93.5 8.6 44 348-401 118-161 (219)
161 3eev_A Chloramphenicol acetylt 98.9 3E-09 1E-13 93.7 6.8 44 348-401 111-154 (212)
162 1mr7_A Streptogramin A acetylt 98.8 4.8E-09 1.6E-13 91.9 4.9 87 305-401 51-156 (209)
163 1xat_A Xenobiotic acetyltransf 98.7 2.1E-08 7.1E-13 87.9 8.3 97 295-401 21-153 (212)
164 4e8l_A Virginiamycin A acetylt 98.7 1.4E-08 4.9E-13 89.4 6.7 34 376-409 125-159 (219)
165 1xat_A Xenobiotic acetyltransf 98.7 8.8E-08 3E-12 83.9 9.9 34 376-409 117-151 (212)
166 3eev_A Chloramphenicol acetylt 98.6 1.2E-07 4.2E-12 83.3 10.5 33 376-408 118-151 (212)
167 3r3i_A UTP--glucose-1-phosphat 98.5 3.6E-06 1.2E-10 82.1 17.1 189 2-198 126-365 (528)
168 1mr7_A Streptogramin A acetylt 98.4 2.9E-07 9.8E-12 80.6 5.3 34 376-409 120-154 (209)
169 3gue_A UTP-glucose-1-phosphate 98.0 0.00081 2.8E-08 65.2 21.7 183 2-192 75-313 (484)
170 2i5e_A Hypothetical protein MM 97.6 6.4E-05 2.2E-09 65.7 5.7 105 2-129 2-111 (211)
171 3ogz_A UDP-sugar pyrophosphory 97.2 0.0027 9.3E-08 63.2 12.0 187 3-197 114-375 (630)
172 1qg8_A Protein (spore coat pol 92.1 1.6 5.6E-05 38.0 11.8 94 36-134 13-116 (255)
173 1xhb_A Polypeptide N-acetylgal 90.1 1.1 3.7E-05 43.6 9.3 106 30-138 34-146 (472)
174 3bcv_A Putative glycosyltransf 89.9 1.4 5E-05 37.9 9.1 97 37-139 18-117 (240)
175 3cgx_A Putative nucleotide-dip 89.3 0.75 2.6E-05 40.5 6.7 88 36-132 37-129 (242)
176 2d7i_A Polypeptide N-acetylgal 88.4 3.7 0.00013 41.0 11.9 103 31-137 118-227 (570)
177 2ffu_A Ppgalnact-2, polypeptid 76.4 22 0.00077 34.4 11.9 101 30-138 71-178 (501)
178 2z86_A Chondroitin synthase; G 66.7 22 0.00074 35.6 9.4 100 31-135 381-483 (625)
179 2z86_A Chondroitin synthase; G 65.5 28 0.00097 34.7 10.0 105 30-139 98-207 (625)
180 3ckj_A Putative uncharacterize 64.6 10 0.00034 34.6 6.0 108 31-141 54-168 (329)
181 4fix_A UDP-galactofuranosyl tr 57.4 26 0.00088 35.5 7.9 102 31-137 186-299 (657)
182 3l7i_A Teichoic acid biosynthe 47.1 4 0.00014 42.0 0.0 92 37-132 15-109 (729)
183 4hg6_A Cellulose synthase subu 46.8 69 0.0024 33.2 9.3 100 30-134 145-266 (802)
184 3sho_A Transcriptional regulat 36.6 1.6E+02 0.0056 23.5 9.5 98 35-144 25-122 (187)
185 3f1y_A Mannosyl-3-phosphoglyce 35.2 23 0.00079 33.2 3.2 111 30-143 99-218 (387)
186 2xvy_A Chelatase, putative; me 33.5 34 0.0012 30.0 3.9 17 1-20 6-22 (269)
187 2nxv_A ATP synthase subunits r 31.7 1.8E+02 0.0061 24.8 8.3 40 91-133 61-101 (249)
188 3lyh_A Cobalamin (vitamin B12) 20.1 52 0.0018 25.0 2.2 54 1-58 2-68 (126)
No 1
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=3.3e-48 Score=381.44 Aligned_cols=344 Identities=18% Similarity=0.285 Sum_probs=271.7
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCc-chhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQ-PMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKV 79 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~-pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~ 79 (411)
|++|+||||||| .|+||+|+|..+||+|+|++|+ |||+|++++|.++ ++++|+|+++++.+.+.+++.+. |+.
T Consensus 10 m~~~~avILAaG--~gtRl~plT~~~pK~llpi~gk~pli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~---~~~ 83 (420)
T 3brk_X 10 ARDAMAYVLAGG--RGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNS-GIRRIGVATQYKAHSLIRHLQRG---WDF 83 (420)
T ss_dssp GGGEEEEEEECC--CCGGGGGGGSSSCGGGSEETTTEETHHHHHHHHHHT-TCCEEEEEECTTCHHHHHHHHHH---SCC
T ss_pred hhceEEEEEcCC--CCCccchhhcCCcccccccCCCCcHHHHHHHHHHhC-CCCeEEEEeCCChHHHHHHHhhh---hcc
Confidence 456899999999 9999999999999999999999 9999999999997 89999999988777888888763 332
Q ss_pred -------ceEEeeCC----CC---CCChHHHHHHHHHhhccCCCeEEEEcCCcccCCChHHHHHHHHhcCCeeEEEEEec
Q 015225 80 -------PVRYLKED----KP---HGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFPLPDLLEAHKRYGGMGTMLVIKV 145 (411)
Q Consensus 80 -------~i~~v~~~----~~---~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~~~~~~~ 145 (411)
.+.++... .. .|++++++.+++++.....++|++++||++++.++..+++.|.+.++++++++.+.
T Consensus 84 ~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~ 163 (420)
T 3brk_X 84 FRPERNESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEV 163 (420)
T ss_dssp CCGGGTCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEE
T ss_pred ccccccCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeec
Confidence 24444322 12 79999999999988533347899999999988899999999998888888888876
Q ss_pred CcccccceeEEEEcCCCCceeEEeccCCCcc-------cCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhh
Q 015225 146 SAESAHQFGELIADPNTKELLHYTEKPETFV-------SDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEAL 217 (411)
Q Consensus 146 ~~~~~~~~g~v~~d~~~~~v~~~~e~~~~~~-------~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (411)
+.+++..||++..| ++++|+.|.|||.... +.+.++|+|+|++++| +.+.+.....
T Consensus 164 ~~~~~~~~g~v~~d-~~g~v~~~~ekp~~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~--------------- 227 (420)
T 3brk_X 164 PRMEATGFGVMHVN-EKDEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAADP--------------- 227 (420)
T ss_dssp ETTGGGGSEEEEEC-TTSBEEEEEESCSSCCCBTTBTTEEEEEEEEEEEEHHHHHHHHTSSCCC----------------
T ss_pred CccccCcccEEEEC-CCCcEEEeEeCCCccccccccccceEEeeeeEEEeHHHHHHHHHHhcccC---------------
Confidence 44567789999988 6899999999986543 6789999999999976 4554322110
Q ss_pred hhcccCCCCceeeeccchhhcccCCCceEEEee-----------cceeeecCCccchhhcchHHHhhhhhcCccccccCC
Q 015225 218 QSATRTLPVDFVRLDQDILSPLAGKKQLYTYET-----------MDFWEQIKTPGMSLKCSSLYLALFKITSPQLLASGN 286 (411)
Q Consensus 218 ~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~-----------~~~~~~I~t~~d~~~a~~~~l~~~~~~~~~~~~~~~ 286 (411)
.+.+.+..++++.++++++++++.. +++|.+|+|+++|+++++.+++.... ..++..
T Consensus 228 --------~~~~~~~~d~l~~li~~g~v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~~~--~~~~~~-- 295 (420)
T 3brk_X 228 --------TSSRDFGKDIIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPD--LDIYDK-- 295 (420)
T ss_dssp -----------------CTTHHHHHSCEEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSSCS--SCTTCC--
T ss_pred --------CccccchHHHHHHHhhhCcEEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCCch--hhcCCC--
Confidence 0112233688888887779999998 88999999999999999888765422 111111
Q ss_pred CCCCcEEcCCcEECCCCEECC-----CCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCc
Q 015225 287 GITSATIAGDVYIHPSAKVHP-----TAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWA 361 (411)
Q Consensus 287 ~~~~~~~~~~~~i~~~~~v~~-----~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~ 361 (411)
...+...+.+++.+.+++ ++.+ .++.||++|+| +++.|.+|+||++|+||++|.|.+|+|+++|.||++|
T Consensus 296 ---~~~i~~~~~i~~~~~i~~~~~~~~~~i-~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~~~i~~~~~i~~~~ 370 (420)
T 3brk_X 296 ---SWPIWTYAEITPPAKFVHDDEDRRGSA-VSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLENAVVLPSVKIGRHA 370 (420)
T ss_dssp ---SSCCCCCCCCCCCCEEECBCSSCBCEE-ESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEEEEECTTCEECTTC
T ss_pred ---CCceeeccccCCCcEEecccccCCcEe-cCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcceEEcCCCEECCCC
Confidence 122334455666666665 7777 48999999999 8999999999999999999999999999999999999
Q ss_pred EEecCCcCCcccceeEECCCCEECCCcEEcce
Q 015225 362 RVQGNGDYNAKLGITILGEAVTVEDEVVVINS 393 (411)
Q Consensus 362 ~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~ 393 (411)
.|.+ |+||+++.|+++++|.++
T Consensus 371 ~i~~----------~~ig~~~~i~~~~~i~~~ 392 (420)
T 3brk_X 371 QLSN----------VVIDHGVVIPEGLIVGED 392 (420)
T ss_dssp EEEE----------EEECTTCEECTTCEESSC
T ss_pred EEec----------eEECCCCEECCCCEEeCC
Confidence 9987 999999999999999443
No 2
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=4.8e-48 Score=383.91 Aligned_cols=365 Identities=16% Similarity=0.284 Sum_probs=267.8
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCc-chhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc-cCC
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQ-PMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN-ELK 78 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~-pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~-~~~ 78 (411)
|++|+||||||| +|+||+|+|..+||+|+|++|+ |||+|++++|.++ ++++|+|++++..+.+.+++.+.+. .++
T Consensus 18 ~~~~~avILAaG--~gtRl~plT~~~pK~llpi~g~~pli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~ 94 (451)
T 1yp2_A 18 SRSVLGIILGGG--AGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNS-NISKIYVLTQFNSASLNRHLSRAYASNMG 94 (451)
T ss_dssp HHHEEEEEC--------CCTTTTTTSCGGGCEETTTEETTHHHHHHHHHT-TCCEEEEEESCCCHHHHHHHHHHCC----
T ss_pred ccceEEEEECCC--CCCcccchhcCCcceeeEECCcceeHHHHHHHHHHC-CCCEEEEEeccCHHHHHHHHhhhhhcccc
Confidence 567999999999 9999999999999999999999 9999999999997 9999999998877778888865210 111
Q ss_pred -----cceEEee--C-----CCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCChHHHHHHHHhcCCeeEEEEEecC
Q 015225 79 -----VPVRYLK--E-----DKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFPLPDLLEAHKRYGGMGTMLVIKVS 146 (411)
Q Consensus 79 -----~~i~~v~--~-----~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~~~~~~~~ 146 (411)
..+.++. + ....|++++++.+++++.....++|++++||++++.++..+++.|++.++++++++.+..
T Consensus 95 ~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~ 174 (451)
T 1yp2_A 95 GYKNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMD 174 (451)
T ss_dssp ----CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEEC
T ss_pred cccccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcC
Confidence 1133432 1 124799999999999885333588999999999888999999999988888898888764
Q ss_pred cccccceeEEEEcCCCCceeEEeccCCCc---------------------ccCcccceEEEeCHHHH-HHhhhhhhcccc
Q 015225 147 AESAHQFGELIADPNTKELLHYTEKPETF---------------------VSDLINCGVYVFTPDFF-TAIQGVLTHRED 204 (411)
Q Consensus 147 ~~~~~~~g~v~~d~~~~~v~~~~e~~~~~---------------------~~~~~~~Giyi~~~~~~-~~l~~~~~~~~~ 204 (411)
.+++..||++..| ++++|+.|.|||... .++++++|+|+|++++| +.+.+..+.
T Consensus 175 ~~~~~~~g~v~~d-~~~~v~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~--- 250 (451)
T 1yp2_A 175 EKRATAFGLMKID-EEGRIIEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRDKFPG--- 250 (451)
T ss_dssp HHHHTTSEEEEEC-TTSBEEEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHTTCTT---
T ss_pred hhhcccCCEEEEC-CCCCEEEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHHHHHHHhhccc---
Confidence 3467789999998 789999999998632 24678999999999987 455543211
Q ss_pred cccccccchhhhhhhcccCCCCceeeeccchhhcccCC-CceEEEeecceeeecCCccchhhcchHHHhhhhhcCccccc
Q 015225 205 RANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSSLYLALFKITSPQLLA 283 (411)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~-~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~~~~~~~~~~~ 283 (411)
..++..++++.++++ .+++++..+++|.+++++++|+++++.++++... ...+..
T Consensus 251 -----------------------~~~~~~~~l~~~i~~g~~v~~~~~~~~w~digt~~~l~~a~~~l~~~~~~-~~~~~~ 306 (451)
T 1yp2_A 251 -----------------------ANDFGSEVIPGATSLGMRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVP-DFSFYD 306 (451)
T ss_dssp -----------------------CCCTTTTHHHHHHHTTCCEEEEECCSCCEECSSHHHHHHHHHGGGCSSSC-SSCSCC
T ss_pred -----------------------ccchHhhHHHHHHhcCCceEEEEeCCEEEECCCHHHHHHHHHHHhccccc-chhccC
Confidence 112335777777765 6899999999999999999999999888765421 011111
Q ss_pred cC-------CCCCCcEEc----CCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCC---------------
Q 015225 284 SG-------NGITSATIA----GDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDD--------------- 337 (411)
Q Consensus 284 ~~-------~~~~~~~~~----~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~--------------- 337 (411)
.. ...+.+.+. .++.||+++.|+. +.|. +++||++|.||++|+|.++++..+
T Consensus 307 ~~~~i~~~~~i~~~~~i~~~~I~~~~Ig~~~~I~~-~~i~-~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
T 1yp2_A 307 RSAPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKN-CKIH-HSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAK 384 (451)
T ss_dssp SSSCCCCCCCCCCCEEEEEEEEEEEEECTTCEEEE-EEEE-SCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTT
T ss_pred CCCeeccCCccCCCeEEcceEEeCeEECCCCEEcc-eEEe-ccEECCCCEECCCCEEcCceEECCCCccccccccccccc
Confidence 10 001222220 2355555555553 5555 899999999999999998888777
Q ss_pred ----CEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcE-E-cceEEcCCCEE
Q 015225 338 ----VEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVV-V-INSIVLPNKVL 401 (411)
Q Consensus 338 ----~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~-v-~~~~i~~~~~v 401 (411)
+.||++|.|.+++||++|.||+++.|.++..- .+...||++++||.+++ | .+++|++|++|
T Consensus 385 g~~~~~Ig~~~~i~~~~Ig~~~~IG~~~~i~~~~~~---~~~~~ig~~~~ig~~~v~Ig~~a~i~agsvv 451 (451)
T 1yp2_A 385 GSVPIGIGKNCHIKRAIIDKNARIGDNVKIINKDNV---QEAARETDGYFIKSGIVTVIKDALIPSGIII 451 (451)
T ss_dssp TCCCSEECTTCEEESEEECTTCEECTTCEECCSSCC---SCEEEGGGTEEEETTEEEECTTCEECTTCBC
T ss_pred CceeEEECCCCEEeccEeCCCcEECCCCEEeCCccc---ccCceeCCCEEEcCCEEEECCCcEECCCccC
Confidence 99999999999999999999999999875221 12246788888888763 3 46777777654
No 3
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=100.00 E-value=7.9e-47 Score=379.43 Aligned_cols=373 Identities=16% Similarity=0.223 Sum_probs=281.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
++.+|||||| +||||+|+| ||+|+||+|+|||+|+|++|.++ |+++|+|++++..+.+++++.+..+.++.++.
T Consensus 12 ~~~vvILAaG--~GtRm~~~~---pK~l~pv~gkp~i~~~l~~~~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~i~ 85 (501)
T 3st8_A 12 DTAVLVLAAG--PGTRMRSDT---PKVLHTLAGRSMLSHVLHAIAKL-APQRLIVVLGHDHQRIAPLVGELADTLGRTID 85 (501)
T ss_dssp CEEEEEEECS--CCGGGCCSS---CGGGCEETTEEHHHHHHHHHHHH-CCSEEEEEECTTHHHHHHHHHHHHHHHTSCCE
T ss_pred CceEEEECCc--CcccCCCCC---CHHHeEECChhHHHHHHHHHHhC-CCCEEEEEeCCCHHHHHHHHHHHHHhcCCcEE
Confidence 4788999999 999999954 99999999999999999999997 99999999999999999999876566788999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcC
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADP 160 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~ 160 (411)
|+.|+++.||++|++.+++++.....+.+++++||.+. ...+..++++|++.++++++++++. +++..||.+..|
T Consensus 86 ~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~--~dp~~yG~i~~~- 162 (501)
T 3st8_A 86 VALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTL--DDPFGYGRILRT- 162 (501)
T ss_dssp EEECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEEC-
T ss_pred EEEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeecc--CCchhccccccc-
Confidence 99999999999999999999975446789999999875 4568999999999999999999998 899999999999
Q ss_pred CCCceeEEeccCCC----cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchh
Q 015225 161 NTKELLHYTEKPET----FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDIL 236 (411)
Q Consensus 161 ~~~~v~~~~e~~~~----~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l 236 (411)
++++|..+.|+++. ...++.++|+|+|+++.|..+.+... ..+...+||+ ++++
T Consensus 163 ~~g~v~~ivEk~~~~~~~~~i~~in~Giy~f~~~~l~~~l~~l~---~~n~~~e~yl-------------------td~i 220 (501)
T 3st8_A 163 QDHEVMAIVEQTDATPSQREIREVNAGVYAFDIAALRSALSRLS---SNNAQQELYL-------------------TDVI 220 (501)
T ss_dssp TTCCEEEEECGGGCCHHHHHCCEEEEEEEEEEHHHHHHHHTTCC---CCSTTCSCCT-------------------THHH
T ss_pred cceeEEeeccccCCChhhccceeeeceeeeecchhHHHhhhhhc---ccccccccch-------------------hhHH
Confidence 89999999998754 34678999999999988765544322 1122233332 6777
Q ss_pred hcccCCC-ceEEEeecceeeecCCc--cchhhcchHHHhhhhh----c-----Ccc-ccccCC--------CCCCcEEcC
Q 015225 237 SPLAGKK-QLYTYETMDFWEQIKTP--GMSLKCSSLYLALFKI----T-----SPQ-LLASGN--------GITSATIAG 295 (411)
Q Consensus 237 ~~l~~~~-~v~~~~~~~~~~~I~t~--~d~~~a~~~~l~~~~~----~-----~~~-~~~~~~--------~~~~~~~~~ 295 (411)
..+...+ .+..+.....|...+.. ..+..+...+..+... . .+. .....+ ......+.+
T Consensus 221 ~~~~~~g~~v~~~~~~~~~~~~g~n~~~~l~~~~~~~~~r~~~~~~~~gv~~~dp~~~~i~~dv~IG~dv~I~~~v~i~g 300 (501)
T 3st8_A 221 AILRSDGQTVHASHVDDSALVAGVNNRVQLAELASELNRRVVAAHQLAGVTVVDPATTWIDVDVTIGRDTVIHPGTQLLG 300 (501)
T ss_dssp HHHHHTTCCEEEEECSSGGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTTCEESCGGGEEECTTCEECTTCEECSSEEEET
T ss_pred HHHHhcCceEEEEeccchhhhcccccHHHHHHHHHHhhhhhhhhhcccCceeeeeccccccCceEECCcceecceeeecC
Confidence 6665444 67777766655544333 2333332222221111 0 000 000000 001111111
Q ss_pred C---------------------------------cEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECC
Q 015225 296 D---------------------------------VYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKE 342 (411)
Q Consensus 296 ~---------------------------------~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~ 342 (411)
. ..+++++.+++.+.|+++++|++++.||.++.+++|+||++|.|++
T Consensus 301 ~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~IG~~v~ik~s~Ig~gskI~~ 380 (501)
T 3st8_A 301 RTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKLGAFVEVKNSTIGTGTKVPH 380 (501)
T ss_dssp TCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEEEETEEEESCEECTTCEEEE
T ss_pred ccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEccccccCCeEEEccceecCCcEEec
Confidence 1 2244555666777777888899999999999999999999999999
Q ss_pred CcEEEeeEECCCCEECCCcEEecCCcCCcccc-eeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 343 NAVVLNSIIGWKSSLGRWARVQGNGDYNAKLG-ITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 343 ~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~-~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
.+++.+++||++|.||+++.+.+.. ...+ .++||++|+||.++.| .+|.|++|++|++++|+..
T Consensus 381 ~~~i~d~~Ig~~v~IG~g~i~~n~d---g~~~~~t~IGd~~~iG~~~~l~~~v~Ig~~~~i~ags~v~~dvp~~~ 452 (501)
T 3st8_A 381 LTYVGDADIGEYSNIGASSVFVNYD---GTSKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVPPGA 452 (501)
T ss_dssp SCEEESEEECSSCEECTTCEEECBC---SSSBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCTTC
T ss_pred cceecCceEcCCCEECCCEEEEccc---CCcccCCEECCCcEECCCCEEcCCcEECCCCEECCCCEECcccCCCC
Confidence 9999999999999999999886621 1111 2788888888887765 6899999999999999864
No 4
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=100.00 E-value=1.7e-46 Score=367.49 Aligned_cols=357 Identities=19% Similarity=0.320 Sum_probs=277.1
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRY 83 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~ 83 (411)
|+||||||| .|+||+|+|...||+|+|++|+|||+|++++|.++ ++++|+|+++++ +++++.+.. .++.+
T Consensus 1 m~aiIlA~G--~g~R~~plt~~~~K~ll~i~g~pli~~~l~~l~~~-~~~~i~vv~~~~---i~~~~~~~~----~~i~~ 70 (401)
T 2ggo_A 1 MKAFILAAG--SGERLEPITHTRPKAFVPILSKPLIEYQIEYLRKC-GIRDITVIVSSK---NKEYFEKKL----KEISI 70 (401)
T ss_dssp CEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECGG---GHHHHHHHC----TTCEE
T ss_pred CeEEEEcCc--CccccCcccCCCCcceeeECCEeHHHHHHHHHHHC-CCCEEEEEeCHH---HHHHhhccC----CcEEE
Confidence 689999999 99999999999999999999999999999999997 899999998765 566766531 14566
Q ss_pred eeCCC-CCCChHHHHHHHHHhhccCCCeEEEEcCCcccC--CChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcC
Q 015225 84 LKEDK-PHGSAGGLYYFRDMIMEENPSHIILLNCDVCCS--FPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADP 160 (411)
Q Consensus 84 v~~~~-~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~ 160 (411)
+.+.. ..|++++++.+.+ .+++++++||+++. .+++.+++ .+++++++.+. .++..|+.+..|
T Consensus 71 ~~~~~~~~g~~~~l~~~~~------~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~--~~~~~~~~v~~~- 136 (401)
T 2ggo_A 71 VTQKDDIKGTGAAILSAKF------NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKV--SNPKDYGVLVLD- 136 (401)
T ss_dssp EECCTTCCBSTTTGGGCCC------SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEEC--SCCSSSCEEEEC-
T ss_pred EeCCCCCCChHHHHHHhcc------CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEc--CCCcceeEEEEC-
Confidence 66655 6789988876654 37899999999975 45666654 35677888777 666778888888
Q ss_pred CCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 161 NTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 161 ~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
+++++..+.|+|..+.+.+.++|+|+|++++|+.+.+.... ..+.+.+ .++++.+
T Consensus 137 ~~g~v~~~~ek~~~~~~~~~~~Giy~~~~~~~~~l~~~~~~-----------------------~~~~~~~-~~~~~~~- 191 (401)
T 2ggo_A 137 NQNNLSKIIEKPEIPPSNLINAGIYKLNSDIFTYLDKISIS-----------------------ERGELEL-TDAINLM- 191 (401)
T ss_dssp TTSSEEEEECSCSSCSCSEEEEEEEEEETHHHHHHHHSCCC-----------------------SSSCBCH-HHHHHHH-
T ss_pred CCCeEEEEEECCCCCCCcEEEEEEEEEcHHHHHHhhhcCcC-----------------------CCCceEH-HHHHHHH-
Confidence 67899999999877778899999999999999887543211 0122334 5677766
Q ss_pred CC-CceEEEeecceeeecCCccchhhcchHHHhhhhhc------CccccccC--------CCCCCcEEcCCcEECCCCEE
Q 015225 241 GK-KQLYTYETMDFWEQIKTPGMSLKCSSLYLALFKIT------SPQLLASG--------NGITSATIAGDVYIHPSAKV 305 (411)
Q Consensus 241 ~~-~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~~~~~------~~~~~~~~--------~~~~~~~~~~~~~i~~~~~v 305 (411)
.. .++..+..+++|.+|+||+||..+++.+++++... ++.....+ .....+.+.++++||+++.|
T Consensus 192 ~~g~~v~~~~~~~~~~dI~t~edl~~a~~~l~~~~~~~~~~~~i~~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I 271 (401)
T 2ggo_A 192 AKDHRVKVIEYEGYWMDIGKPWNIIDVNKWALDNLVFSQNLGNVEDNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEI 271 (401)
T ss_dssp HHHSCEEEEECCSCEEECCSHHHHHHHHHHHHHHTCCCEECSEECSSCEEESCEEECTTCEECTTCEEESSEEECTTCEE
T ss_pred HCCCcEEEEEecceEEcCCCHHHHHHHHHHHHHhcccccccceeCCCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEE
Confidence 44 47888988889999999999999999888765411 11111000 01245666777888888888
Q ss_pred CCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCc----CCcc---------
Q 015225 306 HPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGD----YNAK--------- 372 (411)
Q Consensus 306 ~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~----~~~~--------- 372 (411)
+++|+|+++++||++|.||++|.|.+|+|++++.|++++.+.+++||++|.||+++.+.+... ++..
T Consensus 272 ~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~~i~~~~~~~~ 351 (401)
T 2ggo_A 272 GPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGDSVIAEDVNFGAGTLIANLRFDEKEVKVNVKGKRISSG 351 (401)
T ss_dssp CSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEESCEECTTCEECTTCEECCSCTTCSCCEEEETTEEEECS
T ss_pred CCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcceEECCCcEECCCcEEcCcccCCCceeEEECCceEEec
Confidence 889999888999999999999999999999999999999999999999999999999973111 1100
Q ss_pred --cceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 373 --LGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 373 --~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
.+.++||++|+||.+++| .+|+|++|++|++++|+..
T Consensus 352 ~~~~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~~vp~~~ 397 (401)
T 2ggo_A 352 RRKLGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNRDVGYGE 397 (401)
T ss_dssp CSSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTC
T ss_pred ccccCcEECCCeEECCCcEEcCCcEECCCcEECCCCeEccccCCCc
Confidence 013777777777777766 5788999999999998754
No 5
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=100.00 E-value=5.6e-44 Score=355.67 Aligned_cols=362 Identities=20% Similarity=0.292 Sum_probs=244.2
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
++|.||||||| .|+||++ .+||+|+|++|+|||+|+++.|.++ ++++|+|++++..+.+++++.+. .+
T Consensus 7 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~g~pli~~~l~~l~~~-~~~~i~vv~~~~~~~i~~~~~~~------~~ 74 (459)
T 4fce_A 7 SSMSVVILAAG--KGTRMYS---DLPKVLHPLAGKPMVQHVIDAAMKL-GAQHVHLVYGHGGELLKKTLADP------SL 74 (459)
T ss_dssp CCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHHH-TCSCEEEEESSCHHHHHHHC-----------
T ss_pred CcceEEEECCC--CCccCCC---CCCcccCeeCCeeHHHHHHHHHHhC-CCCcEEEEeCCCHHHHHHHhccC------Cc
Confidence 36899999999 9999997 7899999999999999999999997 89999999988777777777542 34
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEc
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIAD 159 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d 159 (411)
.++.+....|++++++.+++++. ..+++++++||.++ ..++..+++.|.+ .+++++..+. .++..|+++..|
T Consensus 75 ~~v~~~~~~g~~~~i~~~~~~~~--~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~~~g~v~~~ 148 (459)
T 4fce_A 75 NWVLQAEQLGTGHAMQQAAPHFA--DDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKL--DNPSGYGRIVRE 148 (459)
T ss_dssp CEEECSSCCCHHHHHHHHGGGSC--TTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SCCTTSCEEEEE
T ss_pred EEEeCCCCCCcHHHHHHHHHhcC--CCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEec--CCCCcccEEEeC
Confidence 56666777899999999999885 24899999999953 6678899888754 4567777776 777889998887
Q ss_pred CCCCceeEEeccCC----CcccCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccc
Q 015225 160 PNTKELLHYTEKPE----TFVSDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQD 234 (411)
Q Consensus 160 ~~~~~v~~~~e~~~----~~~~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 234 (411)
++++..+.|+|. ...+.+.++|+|+|+++.+ +.+....... ..+.+.+ ++
T Consensus 149 --~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~----------------------~~~~~~~-~d 203 (459)
T 4fce_A 149 --NGDVVGIVEHKDASDAQREINEINTGILVANGRDLKRWLSLLDNNN----------------------AQGEFYI-TD 203 (459)
T ss_dssp --TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHHHHHHHHTCCCCS----------------------TTCSCCT-TH
T ss_pred --CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHHHHHHHHHhCccc----------------------cCCcEEH-HH
Confidence 689999998753 3456789999999999865 5544321110 1122223 77
Q ss_pred hhhcccCC-CceEEEeeccee--eecCCccchhhcchHHHhhhhhcCccccccC---CCCCCcEEcCCcEECCCCEECCC
Q 015225 235 ILSPLAGK-KQLYTYETMDFW--EQIKTPGMSLKCSSLYLALFKITSPQLLASG---NGITSATIAGDVYIHPSAKVHPT 308 (411)
Q Consensus 235 ~l~~l~~~-~~v~~~~~~~~~--~~I~t~~d~~~a~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~~~v~~~ 308 (411)
+++.+.+. .++..+..+++| .+|+||+||..++..+.++.... ++..+ ..+....+.+++.||+++.|+++
T Consensus 204 ~~~~~~~~g~~v~~~~~~~~~~~~~I~tp~Dl~~ae~~l~~~~~~~---l~~~~~~~~~p~~~~~~~~~~ig~~~~i~~~ 280 (459)
T 4fce_A 204 IIALAHADGKKIATVHPTRLSEVEGVNNRLQLSALERVFQTEQAEK---LLLAGVMLLDPSRFDLRGELTHGRDITIDTN 280 (459)
T ss_dssp HHHHHHHTTCCEEEECCSSGGGGCCCSSHHHHHHHHHHHHHHHHHH---HHHHTCEESCGGGEEEEEEEEECSSCEECTT
T ss_pred HHHHHHHCCCeEEEEEcCCHHHhhCCCCHHHHHHHHHHHHHHHHHH---HHhCCcEEeCCCeEEEeCcEEECCCcEECCC
Confidence 88877765 489999988766 56899999999986665443211 00000 01122334444445555555555
Q ss_pred CEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCc--------------------
Q 015225 309 AKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGD-------------------- 368 (411)
Q Consensus 309 ~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~-------------------- 368 (411)
|.|.+++.||++|.|+++|+|.+++||++|.|+.+|+|.+++||++|.||+++.|..+..
T Consensus 281 ~~i~~~~~ig~~~~I~~~~~i~~~~Ig~~~~I~~~~~i~~~~Ig~~~~ig~~~~i~~~~~ig~~~~Ig~~~~i~~~~i~~ 360 (459)
T 4fce_A 281 VIIEGHVILGDRVRIGTGCVLKNCVIGDDSEISPYTVLEDARLDANCTVGPFARLRPGAELAEGAHVGNFVEIKKARLGK 360 (459)
T ss_dssp EEEEEEEEECTTCEECTTCEEESCEECTTCEECSSCEEESCEECTTCEECSSEEECTTCEECTTCEEEEEEEEEEEEECT
T ss_pred eeeccceEECCCCEECCCCEEeccEECCCCEECCCcEEeCCEECCCCEECCccEECCCcEECCCcEECCCeEEeeeEEcC
Confidence 555444455555555555555444444444444444444444444444444443332100
Q ss_pred ----------------CCccc-------------c-eeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 369 ----------------YNAKL-------------G-ITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 369 ----------------~~~~~-------------~-~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
+++.+ + .++||++|+||.+++| .+|+|++|++|++++|+..
T Consensus 361 ~~~i~~~~~i~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igagsvV~~~v~~~~ 438 (459)
T 4fce_A 361 GSKAGHLSYLGDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGTTVTRDVAENE 438 (459)
T ss_dssp TCEEEEEEEEEEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTCEECSCBCTTC
T ss_pred CCEECCceEECCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCCEEccccCCCC
Confidence 00111 0 3788888888888776 5899999999999998754
No 6
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=100.00 E-value=1.9e-43 Score=352.60 Aligned_cols=342 Identities=18% Similarity=0.291 Sum_probs=267.5
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRY 83 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~ 83 (411)
-+||||||| .|+||++ .+||+|+|++|+|||+|++++|.++ ++++|+|++++..+.+.+++.+ .+.+
T Consensus 12 ~~~vIlAaG--~g~R~~~---~~pK~l~~i~gkpli~~~l~~l~~~-g~~~iivv~~~~~~~i~~~~~~-------~i~~ 78 (468)
T 1hm9_A 12 NFAIILAAG--KGTRMKS---DLPKVLHKVAGISMLEHVFRSVGAI-QPEKTVTVVGHKAELVEEVLAG-------QTEF 78 (468)
T ss_dssp EEEEEECCC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTT-CCSEEEEEECTTHHHHHHSSSS-------SSEE
T ss_pred CcEEEEcCC--CCccCCC---CCCcEeeEECCccHHHHHHHHHHhc-CCCCEEEEECCCHHHHHHHhCC-------CcEE
Confidence 479999999 9999986 7899999999999999999999997 8999999998776666665542 3566
Q ss_pred eeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcCC
Q 015225 84 LKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADPN 161 (411)
Q Consensus 84 v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~~ 161 (411)
+.+....|++++++.+++++.. ..++|++++||.++ +.+++.+++.|.+.+++++++..+. .++..|+.+..| +
T Consensus 79 v~~~~~~G~~~sl~~a~~~~~~-~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~--~~~~~~g~v~~d-~ 154 (468)
T 1hm9_A 79 VTQSEQLGTGHAVMMTEPILEG-LSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAET--DNPFGYGRIVRN-D 154 (468)
T ss_dssp EECSSCCCHHHHHHTTHHHHTT-CCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEEC--SCCTTSCEEEEC-T
T ss_pred EeCCccCChHHHHHHHHHHhcc-CCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEecc--CCCCceeEEEEC-C
Confidence 6677778999999999998851 24789999999963 6679999999988888888888887 777889998888 6
Q ss_pred CCceeEEeccCC----CcccCcccceEEEeCHH-HHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchh
Q 015225 162 TKELLHYTEKPE----TFVSDLINCGVYVFTPD-FFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDIL 236 (411)
Q Consensus 162 ~~~v~~~~e~~~----~~~~~~~~~Giyi~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l 236 (411)
+++|..+.|+|. ...+.+.++|+|+|+++ +++.+.+..... . .+.+.+ ++++
T Consensus 155 ~g~v~~~~ek~~~~~~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~---------------------~-~~~~~~-~d~~ 211 (468)
T 1hm9_A 155 NAEVLRIVEQKDATDFEKQIKEINTGTYVFDNERLFEALKNINTNN---------------------A-QGEYYI-TDVI 211 (468)
T ss_dssp TCCEEEEECTTTCCTTGGGCCEEEEEEEEEEHHHHHHHHTTCCSCS---------------------T-TCSCCT-THHH
T ss_pred CCCEEEEEECCCCChHHhcCeEEEEEEEEEEHHHHHHHHHhhcccc---------------------C-CCeEEH-HHHH
Confidence 889999999864 23467899999999998 456655432110 0 011223 7888
Q ss_pred hcccCCC-ceEEEeecceeee--cCCccchhhcchHHHhhhhhc----CccccccCCCCCCcEEcCCcEECCCCEECCCC
Q 015225 237 SPLAGKK-QLYTYETMDFWEQ--IKTPGMSLKCSSLYLALFKIT----SPQLLASGNGITSATIAGDVYIHPSAKVHPTA 309 (411)
Q Consensus 237 ~~l~~~~-~v~~~~~~~~~~~--I~t~~d~~~a~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~ 309 (411)
+.+++.+ +++++..+++|.+ +++++||..++..+..+.... ...+.. +..+.+.+++.|++++.|++++
T Consensus 212 ~~l~~~g~~v~~~~~~g~~~~i~i~t~~dl~~a~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~i~~~~~i~~~~ 287 (468)
T 1hm9_A 212 GIFRETGEKVGAYTLKDFDESLGVNDRVALATAESVMRRRINHKHMVNGVSFVN----PEATYIDIDVEIAPEVQIEANV 287 (468)
T ss_dssp HHHHHHTCCEEEEECSSGGGGCCCCSHHHHHHHHHHHHHHHHHHHHHTTCEESC----GGGCEECTTCEECTTCEECSSC
T ss_pred HHHHHCCCEEEEEEcCChHHhhCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEC----CCeeEECCCcEECCCCEECCCc
Confidence 8887654 8999999999987 559999999988776554221 111111 1245677888999999999999
Q ss_pred EECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcE
Q 015225 310 KIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVV 389 (411)
Q Consensus 310 ~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~ 389 (411)
.|.+++.||++|+|+++|.|.++.||++|.|+ ++.|.+++||+++.||+++.|..+ ++||+++.|+.++.
T Consensus 288 ~i~~~~~ig~~~~I~~~~~i~~~~ig~~~~i~-~~~i~~~~Ig~~~~Ig~~~~i~~~---------~~ig~~~~Ig~~~~ 357 (468)
T 1hm9_A 288 ILKGQTKIGAETVLTNGTYVVDSTIGAGAVIT-NSMIEESSVADGVTVGPYAHIRPN---------SSLGAQVHIGNFVE 357 (468)
T ss_dssp EEESSCEECTTCEECTTCEEESCEECTTCEEC-SCEEESCEECTTCEECSSCEECSS---------CEECTTCEEEEEEE
T ss_pred EECCCCEECCCCEECCCCEEeccEEeCCcEEE-EEEEeccccCCCcEECCceEEecC---------cEECCccEECCCcE
Confidence 99999999999999999999999999999999 999999999999999999988865 77777776666555
Q ss_pred EcceEEcCCC
Q 015225 390 VINSIVLPNK 399 (411)
Q Consensus 390 v~~~~i~~~~ 399 (411)
+.++.|++++
T Consensus 358 i~~~~Ig~~~ 367 (468)
T 1hm9_A 358 VKGSSIGENT 367 (468)
T ss_dssp EESCEECTTC
T ss_pred EeeeEEcCCc
Confidence 5444444443
No 7
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=100.00 E-value=4.9e-42 Score=341.38 Aligned_cols=343 Identities=21% Similarity=0.286 Sum_probs=266.8
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
+++.||||||| .|+||++ .+||+|+|++|+|||+|+++.|.++ ++++++|+++++.+.+++++.+. .+
T Consensus 4 ~~~~aiIlA~G--~g~Rl~~---~~pK~l~~i~gkpli~~~l~~l~~~-~~~~iivv~~~~~~~i~~~~~~~------~~ 71 (456)
T 2v0h_A 4 KALSAVILAAG--KGTRMYS---DLPKVLHTIAGKPMVKHVIDTAHQL-GSENIHLIYGHGGDLMRTHLANE------QV 71 (456)
T ss_dssp CCEEEEEECCC--CCGGGCS---SSCGGGSEETTEEHHHHHHHHHHHT-TCSCEEEEECTTHHHHHHHTTTC------CC
T ss_pred CcceEEEECCC--CCcccCC---CCCccccEECCccHHHHHHHHHHhC-CCCcEEEEeCCCHHHHHHHhhcC------Cc
Confidence 46789999999 9999986 7899999999999999999999997 89999999988777777776542 35
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEc
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIAD 159 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d 159 (411)
.++.++...|++++++.+++++.. .+++++++||.++ ..+++.+++.|.+ ++++++..+. .++..|+.+..|
T Consensus 72 ~~v~~~~~~g~~~~~~~~~~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~--~~~~~~g~v~~~ 145 (456)
T 2v0h_A 72 NWVLQTEQLGTAHAVQQAAPFFKD--NENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNL--DNPTGYGRIIRE 145 (456)
T ss_dssp EEEECSCCCCHHHHHHHHGGGCCT--TSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEEC--SSCTTSCEEEEE
T ss_pred EEEeCCCCCCcHHHHHHHHHhcCC--CCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeec--CCCCccceEEEc
Confidence 666667778999999999988742 4789999999964 5678999988765 5677777776 667778988877
Q ss_pred CCCCceeEEeccCCC----cccCcccceEEEeCHHH-HHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccc
Q 015225 160 PNTKELLHYTEKPET----FVSDLINCGVYVFTPDF-FTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQD 234 (411)
Q Consensus 160 ~~~~~v~~~~e~~~~----~~~~~~~~Giyi~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 234 (411)
++++..+.|++.. ....+.++|+|+|+++. ++.+.+..... ..+.+.+ ++
T Consensus 146 --~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~----------------------~~~~~~~-~d 200 (456)
T 2v0h_A 146 --NGNVVAIVEQKDANAEQLNIKEVNTGVMVSDGASFKKWLARVGNNN----------------------AQGEYYL-TD 200 (456)
T ss_dssp --TTEEEEEECTTTCCHHHHTCCEEEEEEEEEEHHHHHHHHTTCCCCS----------------------TTCCCCG-GG
T ss_pred --CCcEEEEEECCCCChhHhcCcEEEEEEEEEEHHHHHHHHHHhcccc----------------------ccccEEH-HH
Confidence 6899999988642 23568899999999985 45554322110 0112223 67
Q ss_pred hhhcccCCC-ceEEEeecce--eeecCCccchhhcchHHHhhhhhcCccccccCC---CCCCcEEcCCcEECCCCEECCC
Q 015225 235 ILSPLAGKK-QLYTYETMDF--WEQIKTPGMSLKCSSLYLALFKITSPQLLASGN---GITSATIAGDVYIHPSAKVHPT 308 (411)
Q Consensus 235 ~l~~l~~~~-~v~~~~~~~~--~~~I~t~~d~~~a~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~v~~~ 308 (411)
+++.+...+ ++..+..+++ |.+|+||+||..++..+..+... .++..+. .+..+.+.+++.||+++.|+++
T Consensus 201 ~~~~~~~~g~~v~~~~~~~~~~~~~I~tpeDl~~a~~~l~~~~~~---~~~~~~~~~~~~~~~~i~~~~~ig~~~~I~~~ 277 (456)
T 2v0h_A 201 LIALANQDNCQVVAVQATDVMEVEGANNRLQLAALERYFQNKQAS---KLLLEGVMIYDPARFDLRGTLEHGKDVEIDVN 277 (456)
T ss_dssp HHHHHHHTTCCEEEEECSCTGGGCCCSSHHHHHHHHHHHHHHHHH---HHHHTTCEESCGGGEEEEEEEEECSSCEECSS
T ss_pred HHHHHHHcCCEEEEEEeCCcceEEeCCCHHHHHHHHHHHHHHHHH---HHHHcCCEEECCCccEEcCceEECCCCEEcCC
Confidence 787776554 7999988664 56889999999998766544321 1111110 1235678888999999999999
Q ss_pred CEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCc
Q 015225 309 AKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEV 388 (411)
Q Consensus 309 ~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~ 388 (411)
|.|++++.||++|.|+++|.|.+++||++|.|+++|+|.+++||+++.|++++.+..+ ++||+++.||+++
T Consensus 278 ~~i~~~~~Ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~---------~~ig~~~~ig~~~ 348 (456)
T 2v0h_A 278 VIIEGNVKLGDRVKIGTGCVLKNVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPG---------AELAAETHVGNFV 348 (456)
T ss_dssp EEEEEEEEECTTCEECTTCEEEEEEECTTCEECSSCEEEEEEECTTCEECSSEEECTT---------CEECTTCEEEEEE
T ss_pred cEEcCCcEECCCCEECCCCEEEeEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCC---------CEECCCCEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999876 7788777777766
Q ss_pred EEcceEEcCCC
Q 015225 389 VVINSIVLPNK 399 (411)
Q Consensus 389 ~v~~~~i~~~~ 399 (411)
.+.++.+++++
T Consensus 349 ~i~~~~i~~~~ 359 (456)
T 2v0h_A 349 EIKKSTVGKGS 359 (456)
T ss_dssp EEESCEECTTC
T ss_pred EEeccEECCCC
Confidence 55444444443
No 8
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=5.6e-36 Score=278.65 Aligned_cols=240 Identities=18% Similarity=0.294 Sum_probs=202.6
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc---c---
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN---E--- 76 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~---~--- 76 (411)
.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.++ |+++|+|++++..+.+++++.+.+. .
T Consensus 2 ~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~~ 78 (281)
T 3juk_A 2 IKKCLFPAAG--YGTRFLPITKTIPKEMLPIVDKPLIQYAVEEAMEA-GCEVMAIVTGRNKRSLEDYFDTSYEIEHQIQG 78 (281)
T ss_dssp CCEEEEECCS--CCGGGTTGGGTSCGGGCBSSSSBHHHHHHHHHHHH-TCCEEEEEECTTHHHHHHHTSCCC--------
T ss_pred ceEEEEECCc--CCcccCccccCCCcccceECCEEHHHHHHHHHHhC-CCCEEEEEecCCHHHHHHHHhcchhhhhhhhc
Confidence 4899999999 99999999999999999999999999999999997 9999999999888889998875311 0
Q ss_pred --------------CCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCC-----hHHHHHHHHhcCCe
Q 015225 77 --------------LKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFP-----LPDLLEAHKRYGGM 137 (411)
Q Consensus 77 --------------~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~-----l~~~l~~~~~~~~~ 137 (411)
++.++.++.+....|++++++.+++++. +++|+|++||++++.+ +..+++.|.+.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~---~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~- 154 (281)
T 3juk_A 79 TNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIG---NEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC- 154 (281)
T ss_dssp CCHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHC---SSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-
T ss_pred ccchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcC---CCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-
Confidence 2456778888888999999999999985 4789999999998777 9999999988777
Q ss_pred eEEEEEecCcccccceeEEEEcCC--CC--ceeEEeccCC--CcccCcccceEEEeCHHHHHHhhhhhhccccccccccc
Q 015225 138 GTMLVIKVSAESAHQFGELIADPN--TK--ELLHYTEKPE--TFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQV 211 (411)
Q Consensus 138 ~~~~~~~~~~~~~~~~g~v~~d~~--~~--~v~~~~e~~~--~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~ 211 (411)
+++++...+.++++.||++..| + ++ +|..+.|||. ...+.+.++|+|+|++++|+.+.+....
T Consensus 155 ~~v~~~~~~~~~~~~~g~v~~~-~~~~g~~~v~~~~Ekp~~~~~~~~~~~~GiYi~~~~~l~~l~~~~~~---------- 223 (281)
T 3juk_A 155 SIVAIEEVALEEVSKYGVIRGE-WLEEGVYEIKDMVEKPNQEDAPSNLAVIGRYILTPDIFEILSETKPG---------- 223 (281)
T ss_dssp CEEEEEECCTTTGGGSEEEEEE-EEETTEEEEEEEEESCCTTTCSCSEEEEEEEEECTTHHHHHHTCCCC----------
T ss_pred CEEEEEEechhhcccCCEEEec-cCCCCceEEeEEEECcCCCCCCcceeEEEEEEECHHHHHHHHhcCCC----------
Confidence 6777777655678899999887 5 67 9999999986 4557889999999999999887653110
Q ss_pred chhhhhhhcccCCCCceeeeccchhhcccCCCceEEEeecceeeecCCccchhhcchHHHhhh
Q 015225 212 SSFEALQSATRTLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSSLYLALF 274 (411)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~~ 274 (411)
..+.+.+ +++++.+++++++++|..+++|.||+||++|+++++.++...
T Consensus 224 -------------~~~e~~l-~d~i~~l~~~~~v~~~~~~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 224 -------------KNNEIQI-TDALRTQAKRKRIIAYQFKGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp -------------GGGSCCH-HHHHHHHHHHSCCEEEECCSEEEETTSHHHHHHHHHHHHHHH
T ss_pred -------------CCCceeH-HHHHHHHHhcCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhch
Confidence 0123335 788888887789999999999999999999999999887654
No 9
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=100.00 E-value=1.1e-34 Score=268.13 Aligned_cols=236 Identities=21% Similarity=0.327 Sum_probs=202.8
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccc-hHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYE-EREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~-~~~i~~~~~~~~~~~~~~i 81 (411)
.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.++ ++++|+|++++. .+.+.+++.+. +.|+.++
T Consensus 24 ~m~aiIlAaG--~g~Rl~~lt~~~pK~ll~i~g~pli~~~l~~l~~~-g~~~iivv~~~~~~~~~~~~~~~~-~~~~~~i 99 (269)
T 4ecm_A 24 AMKGIILAGG--TGSRLYPITKVTNKHLLPVGRYPMIYHAVYKLKQC-DITDIMIITGKEHMGDVVSFLGSG-QEFGVSF 99 (269)
T ss_dssp CEEEEEECCS--CCGGGTTTTSSSCGGGSEETTEEHHHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTS-GGGTCEE
T ss_pred CcEEEEECCC--CccccccccCCCCceecEECCEEHHHHHHHHHHHC-CCCEEEEECChhhHHHHHHHHhhc-cccCceE
Confidence 5899999999 99999999999999999999999999999999997 899999998864 36677887753 4567788
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcCC
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADPN 161 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~~ 161 (411)
.++.+....|++++++.+++++. +++|++++||+++..++..+++.|.+.++++++++.+. .++..||++..|
T Consensus 100 ~~~~~~~~~G~~~al~~a~~~~~---~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~--~~~~~~g~v~~d-- 172 (269)
T 4ecm_A 100 TYRVQDKAGGIAQALGLCEDFVG---NDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSV--DDPERFGVANIQ-- 172 (269)
T ss_dssp EEEECSSCCCHHHHHHTTHHHHT---TSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEEC--SCGGGSEEEEEE--
T ss_pred EEeeCCccCcHHHHHHHHHHhcC---CCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEEC--CCCCCceEEEEc--
Confidence 88888788899999999999885 58999999999999999999999998888899998887 678889999988
Q ss_pred CCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhcccC
Q 015225 162 TKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLAG 241 (411)
Q Consensus 162 ~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~ 241 (411)
+++|+.+.|||..+.+.+.++|+|+|++++|+.+.+..+. ..+.+.+ .++++.+++
T Consensus 173 ~g~v~~~~ekp~~~~~~~~~~Giy~~~~~~l~~l~~~~~~-----------------------~~ge~~l-~d~l~~l~~ 228 (269)
T 4ecm_A 173 NRKIIEIEEKPKEPKSSYAVTGIYLYDSKVFSYIKELKPS-----------------------ARGELEI-TDINNWYLK 228 (269)
T ss_dssp TTEEEEEEESCSSCSCSEEEEEEEEECTTHHHHHTSCCBC-----------------------TTSCBCH-HHHHHHHHH
T ss_pred CCEEEEEEECCCCCCCcEEEEEEEEECHHHHHhhhhcCCC-----------------------CCCeeeH-HHHHHHHHH
Confidence 4899999999977778899999999999999877654211 0122334 788888887
Q ss_pred CCceEEEeecceeeecCCccchhhcchHHHhh
Q 015225 242 KKQLYTYETMDFWEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 242 ~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~ 273 (411)
.+++.++..+++|.+|+||++|.++++.+++.
T Consensus 229 ~g~v~~~~~~~~~~dIgt~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 229 RGVLTYNEMSGWWTDAGTHVSLQRANALARDI 260 (269)
T ss_dssp TTCEEEEECCSCEEECSSHHHHHHHHHHTTTC
T ss_pred cCCEEEEEeCCEEEeCCCHHHHHHHHHHHHhc
Confidence 88999999999999999999999998776543
No 10
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=100.00 E-value=1e-32 Score=259.33 Aligned_cols=239 Identities=18% Similarity=0.264 Sum_probs=193.7
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc------
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN------ 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~------ 75 (411)
+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++..+ |+++|+|++++..+.+.+++...+.
T Consensus 7 ~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 83 (302)
T 2e3d_A 7 KVKKAVIPVAG--LGTRMLPATKAIPKEMLPLVDKPLIQYVVNECIAA-GITEIVLVTHSSKNSIENHFDTSFELEAMLE 83 (302)
T ss_dssp SCCEEEEECCS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECGGGHHHHHHHSCCHHHHHHHC
T ss_pred cccEEEEECCc--CcccCCccccCCCceeeEECCeEHHHHHHHHHHHC-CCCEEEEEeCCCHHHHHHHHhcchhhhhhhh
Confidence 45899999999 99999999999999999999999999999999997 8999999998877888888865210
Q ss_pred ---------------cCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccC-----C---ChHHHHHHHH
Q 015225 76 ---------------ELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCS-----F---PLPDLLEAHK 132 (411)
Q Consensus 76 ---------------~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~-----~---~l~~~l~~~~ 132 (411)
.++.++.++.+....|++++++.+++++. +++|++++||++++ . ++..+++.|.
T Consensus 84 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~ 160 (302)
T 2e3d_A 84 KRVKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVG---DEPVAVILPDVILDEYESDLSQDNLAEMIRRFD 160 (302)
T ss_dssp ----CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHC---SSCEEEECTTEEECTTSSCTTTSTHHHHHHHHH
T ss_pred hccchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcC---CCcEEEEcCCccccCccccchHHHHHHHHHHHH
Confidence 13556777777788899999999999885 47899999999986 2 7999999998
Q ss_pred hcCCeeEEEEEecCcccccceeEEEEcC---CCC---ceeEEeccCC--CcccCcccceEEEeCHHHHHHhhhhhhcccc
Q 015225 133 RYGGMGTMLVIKVSAESAHQFGELIADP---NTK---ELLHYTEKPE--TFVSDLINCGVYVFTPDFFTAIQGVLTHRED 204 (411)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~g~v~~d~---~~~---~v~~~~e~~~--~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~ 204 (411)
+.++ +++++.+. ++++.||++..+. +++ +|..+.|||. ...+.+.++|+|+|++++|+.+.+..+..
T Consensus 161 ~~~~-~~i~~~~~--~~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~-- 235 (302)
T 2e3d_A 161 ETGH-SQIMVEPV--ADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPLLAKTPPGA-- 235 (302)
T ss_dssp HHCC-EEEEEEEC--SCGGGSEEEECTTCCCCTTCEEEECEEEESCCTTTCSCSEEEEEEEEECTTHHHHHTCCCC----
T ss_pred hcCC-cEEEEEEc--cCCCCccEEEecccccCCCCceeEEEEEECCCCCccccceEEEEEEEECHHHHHHHHhhCCCC--
Confidence 7776 67777776 7778899887631 245 8999999985 34567899999999999998876532110
Q ss_pred cccccccchhhhhhhcccCCCCceeeeccchhhcccCCCceEEEeecceeeecCCccchhhcchHHHhh
Q 015225 205 RANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~ 273 (411)
.+.+.+ +++++.+++++++.++..+++|.||+||++|++++..++..
T Consensus 236 ---------------------~~~~~l-~d~i~~l~~~~~v~~~~~~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 236 ---------------------GDEIQL-TDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp -----------------------CCCH-HHHHHHHHHHSCEEEEECCSCEEECSSHHHHHHHHHHHHHH
T ss_pred ---------------------CCceeh-HHHHHHHHHhCCEEEEEeCCeEEcCCCHHHHHHHHHHHHhc
Confidence 011223 67777777667999999999999999999999999666543
No 11
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=100.00 E-value=8.7e-33 Score=259.09 Aligned_cols=242 Identities=18% Similarity=0.249 Sum_probs=177.2
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc------
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN------ 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~------ 75 (411)
+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.++ |+++|+|++++..+.+.+++...+.
T Consensus 13 ~~~~avIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~l~~~l~ 89 (297)
T 2ux8_A 13 PLRKAVFPVAG--LGTRFLPATKAMPKEMLPVVDRPLIQYAVDEAVEA-GIEQMIFVTGRGKSALEDHFDIAYELEATMA 89 (297)
T ss_dssp CCCEEEEEECC--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTCHHHHHHTSCCHHHHHHHH
T ss_pred CccEEEEECCC--CccccCccccCCCceeeeECCeEHHHHHHHHHHhC-CCCEEEEEeCCCHHHHHHHHhhhhhhhhhhh
Confidence 46899999999 99999999999999999999999999999999997 9999999998877788888764210
Q ss_pred -------------cCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccC---CChHHHHHHHHhcCCeeE
Q 015225 76 -------------ELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCS---FPLPDLLEAHKRYGGMGT 139 (411)
Q Consensus 76 -------------~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~---~~l~~~l~~~~~~~~~~~ 139 (411)
..+.++.++.+....|++++++.+++++. +++|++++||++++ .++..+++.|.+.++ .+
T Consensus 90 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~---~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~ 165 (297)
T 2ux8_A 90 ARGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVG---DEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NL 165 (297)
T ss_dssp TTTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHC---SSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EE
T ss_pred hccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcC---CCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CE
Confidence 03456788777778899999999999885 58999999999975 569999999987765 46
Q ss_pred EEEEecCcccccceeEEEEcC-CCC--ceeEEeccCC--CcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchh
Q 015225 140 MLVIKVSAESAHQFGELIADP-NTK--ELLHYTEKPE--TFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSF 214 (411)
Q Consensus 140 ~~~~~~~~~~~~~~g~v~~d~-~~~--~v~~~~e~~~--~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 214 (411)
+++.+.+.++++.||++..|. +++ +|..|.|+|. ...+.+.++|+|+|++++|+.+.+..+..
T Consensus 166 i~~~~~~~~~~~~yg~v~~~~~~~~~~~v~~~~ekp~~~~~~~~~~~~Giyi~~~~~l~~l~~~~~~~------------ 233 (297)
T 2ux8_A 166 ICAEEVPDDQTHRYGIITPGTQDGVLTEVKGLVEKPAPGTAPSNLSVIGRYILQPEVMRILENQGKGA------------ 233 (297)
T ss_dssp EEEC-----------CCCCCCBCSSEEEC--------------CCCEEEEEEECTHHHHHHHHTC---------------
T ss_pred EEEEecCcccCCCCCeEEecccCCCceeEEEEEECCCCCCCCccEEEEEEEEECHHHHHHHHhhCCCC------------
Confidence 666554334667788876651 144 8999999884 34567899999999999988876543210
Q ss_pred hhhhhcccCCCCceeeeccchhhcccCCCceEEEeecceeeecCCccchhhcchHHHhhh
Q 015225 215 EALQSATRTLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSSLYLALF 274 (411)
Q Consensus 215 ~~~~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~~ 274 (411)
.+.+.+ +++++.++++++++++..+++|.||+||++|.+++..++...
T Consensus 234 -----------~~~~~l-~d~i~~l~~~~~v~~~~~~~~w~dIgt~~dl~~a~~~~~~~~ 281 (297)
T 2ux8_A 234 -----------GGEIQL-TDAMQRMIGDQPFHGVTFQGTRYDCGDKAGFIQANLAVALSR 281 (297)
T ss_dssp ----------------C-CTTGGGGTTTSCEEEEECSSEEEETTSHHHHHHHHHHHHHHC
T ss_pred -----------CCeeEH-HHHHHHHHhcCCEEEEEecceEEeCCCHHHHHHHHHHHHhcC
Confidence 012224 678888887789999999999999999999999997776543
No 12
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=100.00 E-value=4.6e-32 Score=252.94 Aligned_cols=236 Identities=18% Similarity=0.281 Sum_probs=195.4
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEec-ccchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIG-FYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~-~~~~~~i~~~~~~~~~~~~~~i 81 (411)
+|+||||||| .|+||+|+|...||+|+|++|+|||+|+++.|..+ |+++|+|++ +++.+.+++++.+. ++|+.++
T Consensus 2 ~~~aIILAgG--~gtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i 77 (293)
T 1fxo_A 2 KRKGIILAGG--SGTRLHPATLAISKQLLPVYDKPMIYYPLSTLMLA-GIREILIISTPQDTPRFQQLLGDG-SNWGLDL 77 (293)
T ss_dssp CEEEEEECCC--CCTTTTTHHHHSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTS-GGGTCEE
T ss_pred CceEEEECCC--CCCcCccccCCCCceeCeECCEeHHHHHHHHHHHC-CCCEEEEEeccccHHHHHHHHhcc-cccCceE
Confidence 4899999999 99999999999999999999999999999999997 899998776 55667788888764 3467778
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcC
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADP 160 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~ 160 (411)
.++.++...|+++++..+++++. +++++++.||.++ +.++..+++.|.+.+..++++..++ .++..||++..|
T Consensus 78 ~~~~~~~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~~g~v~~d- 151 (293)
T 1fxo_A 78 QYAVQPSPDGLAQAFLIGESFIG---NDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHV--LDPERYGVVEFD- 151 (293)
T ss_dssp EEEECSSCCCGGGHHHHTHHHHT---TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEEC--SCGGGSEEEEEC-
T ss_pred EEeeCCCCCCHHHHHHHHHHHhC---CCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEEC--CCcccCcEEEEC-
Confidence 88887778899999999999885 4788888999985 6789999999977777778887777 778889999998
Q ss_pred CCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 161 NTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 161 ~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
+++++..+.|||..+.+.+.++|+|+|++++++.+.+..+.. .+.+.+ +|+++.++
T Consensus 152 ~~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~~-----------------------~ge~~~-td~~~~~l 207 (293)
T 1fxo_A 152 QGGKAISLEEKPLEPKSNYAVTGLYFYDQQVVDIARDLKPSP-----------------------RGELEI-TDVNRAYL 207 (293)
T ss_dssp TTSCEEEEEESCSSCSSSEEEEEEEEECTTHHHHHHHCCCCT-----------------------TSSCCH-HHHHHHHH
T ss_pred CCCcEEEEEECCCCCCCCeEEEEEEEEcHHHHHHHHhcCccc-----------------------CCceeH-HHHHHHHH
Confidence 789999999999777788999999999999988776532110 112223 67777777
Q ss_pred CCCceEEEeec-ce-eeecCCccchhhcchHHHh
Q 015225 241 GKKQLYTYETM-DF-WEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 241 ~~~~v~~~~~~-~~-~~~I~t~~d~~~a~~~~l~ 272 (411)
+.+++.++... ++ |.|++|++||.+++..+..
T Consensus 208 ~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~ 241 (293)
T 1fxo_A 208 ERGQLSVEIMGRGYAWLDTGTHDSLLEAGQFIAT 241 (293)
T ss_dssp HTTCEEEEECCTTSEEEECCSHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeCCCCEEEcCCCHHHHHHHHHHHHH
Confidence 77777777664 65 9999999999999876644
No 13
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=100.00 E-value=1.2e-31 Score=249.98 Aligned_cols=236 Identities=18% Similarity=0.281 Sum_probs=194.4
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecc-cchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGF-YEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~-~~~~~i~~~~~~~~~~~~~~i 81 (411)
.|++|||||| .|+||+|+|...||+|+|++|+|||+|+++.|..+ ++++|+|++. ++.+.+++++.+. ++|+.++
T Consensus 3 ~m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~Iivv~~~~~~~~i~~~l~~g-~~~g~~i 78 (295)
T 1lvw_A 3 HMKGIVLAGG--SGTRLYPITRAVSKQLLPIYDKPMIYYPLSVLMLA-GIRDILIISTPRDLPLYRDLLGDG-SQFGVRF 78 (295)
T ss_dssp SCEEEEECCC--CCSTTTTTTTSSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTS-GGGTSEE
T ss_pred ceEEEEECCC--CCCccccccCCCCceecEECCeeHHHHHHHHHHHC-CCCeEEEEeccchHHHHHHHhhhc-cccCceE
Confidence 4899999999 99999999999999999999999999999999997 8999998764 6667788888764 3467778
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcC
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADP 160 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~ 160 (411)
.++.+....|+++++..+++++. +++++++.||.++ +.++..+++.|.+.+..++++..++ .++..||++..|
T Consensus 79 ~~~~~~~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~~g~v~~d- 152 (295)
T 1lvw_A 79 SYRVQEEPRGIADAFIVGKDFIG---DSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYV--RDPRPFGVVEFD- 152 (295)
T ss_dssp EEEECSSCCCGGGHHHHTHHHHT---TSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEEC--SCCTTSEEEEEC-
T ss_pred EEeeCCCCCChHHHHHHHHHHhC---CCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEEC--CCcccCCEEEEC-
Confidence 88877778899999999999885 4678888899985 6789999999977677778888777 677789999988
Q ss_pred CCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 161 NTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 161 ~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
++++|+.+.|||..+.+.+.++|+|+|++++++.+.+..+. ..+.+.+ +++++.++
T Consensus 153 ~~g~v~~~~ekp~~~~s~~~~~Giy~f~~~~l~~~~~~~~~-----------------------~~ge~~~-td~~~~~l 208 (295)
T 1lvw_A 153 SEGRVISIEEKPSRPKSNYVVPGLYFYDNQVVEIARRIEPS-----------------------DRGELEI-TSVNEEYL 208 (295)
T ss_dssp TTSBEEEEEESCSSCSCSEECCSEEEECTTHHHHHHHCCCC-----------------------TTSCCCH-HHHHHHHH
T ss_pred CCCcEEEEEECCCCCCCCEEEEEeEEEcHHHHHHHHhcCCc-----------------------ccCceeH-HHHHHHHH
Confidence 78999999999977777899999999999998877653211 0112223 67777777
Q ss_pred CCCceEEEeec-ce-eeecCCccchhhcchHHHh
Q 015225 241 GKKQLYTYETM-DF-WEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 241 ~~~~v~~~~~~-~~-~~~I~t~~d~~~a~~~~l~ 272 (411)
+.+++.++... ++ |.|++|++||.+++..+..
T Consensus 209 ~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~ 242 (295)
T 1lvw_A 209 RMGKLRVELMGRGMAWLDTGTHDGLLEASSFIET 242 (295)
T ss_dssp HTTCEEEEEECTTCEECCCSSHHHHHHHHHHHHH
T ss_pred HcCCcEEEEeCCCCeEEeCCCHHHHHHHHHHHHH
Confidence 77777776664 65 9999999999999876644
No 14
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.3e-32 Score=256.47 Aligned_cols=242 Identities=17% Similarity=0.214 Sum_probs=194.5
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCccc--CCcchhHhHHHHhccCCCCcEEEEecccc-hHHHHHHHhhhcccC
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPL--AGQPMIQHPISACKRIPNLAQIFLIGFYE-EREFALYVSSISNEL 77 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi--~g~pli~~~l~~l~~~~gi~~I~Iv~~~~-~~~i~~~~~~~~~~~ 77 (411)
||+|.||||||| .|+||+| ||+|+|+ +|+|||+|+++++..+ ++++|+|++++. .+.+++++.+. ..+
T Consensus 3 ~m~~~~vIlAaG--~g~R~~~-----~K~l~~ig~~g~pli~~~l~~~~~~-~~~~i~vv~~~~~~~~~~~~~~~~-~~~ 73 (303)
T 3pnn_A 3 AMKPTLFVLAAG--MGSRYGS-----LKQLDGIGPGGDTIMDYSVYDAIRA-GFGRLVFVIRHSFEKEFREKILTK-YEG 73 (303)
T ss_dssp CCCCEEEEECTT--CBCTTSS-----BCCCCCCSTTSCCHHHHHHHHHHHH-TCCEEEEEECGGGHHHHHHHTHHH-HTT
T ss_pred CCceEEEEECCC--CcccCCC-----CceEeEcCCCCeeHHHHHHHHHHHC-CCCeEEEEcCchHHHHHHHHHHHH-hcc
Confidence 778999999999 9999998 7999999 5999999999999996 999999999887 47899998864 335
Q ss_pred CcceEEeeCC---------------CCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCC-hHHHHHHHHh---cCCee
Q 015225 78 KVPVRYLKED---------------KPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFP-LPDLLEAHKR---YGGMG 138 (411)
Q Consensus 78 ~~~i~~v~~~---------------~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~---~~~~~ 138 (411)
+.++.++.+. +..|++++++.++++++ ++|+|++||.+++.+ ++.++++|.+ .++++
T Consensus 74 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i~----~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~ 149 (303)
T 3pnn_A 74 RIPVELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAIR----EPFAVINADDFYGRNGFEVLARKLMTLEGKQGEY 149 (303)
T ss_dssp TSCEEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTCC----SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEE
T ss_pred CCcEEEEecccccccccccccccccccCCcHHHHHHHHHhcC----CCEEEEECCeecCHHHHHHHHHHHHHhccccCce
Confidence 6678887765 57899999999999883 789999999998765 8999999976 56788
Q ss_pred EEEEEecCcccc-cce-----eEEEEcCCCCceeEEeccCCC-------------------cccCcccceEEEeCHHHHH
Q 015225 139 TMLVIKVSAESA-HQF-----GELIADPNTKELLHYTEKPET-------------------FVSDLINCGVYVFTPDFFT 193 (411)
Q Consensus 139 ~~~~~~~~~~~~-~~~-----g~v~~d~~~~~v~~~~e~~~~-------------------~~~~~~~~Giyi~~~~~~~ 193 (411)
++++.+. .++ +.| |++..| ++++|+.|.|||.. +.+.++++|+|+|++++|+
T Consensus 150 ~v~~~~~--~~~~~~~g~~~~G~v~~d-~~g~v~~i~Ekp~~~~~~~~~~~~~~~g~~~~~~~~~~i~~GiY~f~~~~~~ 226 (303)
T 3pnn_A 150 CMVGYRV--GNTLSESGGVSRGVCQVD-EKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSMNMWGFTPDYFD 226 (303)
T ss_dssp EEEEEEG--GGSCBTTBCEEEEEEEEC-TTSBEEEEEEEEEEEEETTEEEEECTTSCEEEECTTCEEEEEEEEECTHHHH
T ss_pred EEEEEEC--CCccCccCceeeeeEeeC-CCCcEEEEEECCCCccccccccccccccccccCCCCCEEEEEEEEECHHHHH
Confidence 8888887 555 556 578888 78999999999853 2577999999999999999
Q ss_pred HhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhcccCCC--ceEEEeecceeeecCCccchhhcchHHH
Q 015225 194 AIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLAGKK--QLYTYETMDFWEQIKTPGMSLKCSSLYL 271 (411)
Q Consensus 194 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~~--~v~~~~~~~~~~~I~t~~d~~~a~~~~l 271 (411)
.+.+.+....... ... ..+.+.+ +++++.+++.+ ++.++..+++|.+|++|++|.++++.+.
T Consensus 227 ~l~~~~~~~l~~~--------------~~~-~~~e~~l-~d~i~~li~~g~~~v~~~~~~g~w~dIgt~~dl~~a~~~l~ 290 (303)
T 3pnn_A 227 YSEELFINFLNAH--------------GQE-PKSEFFI-PFVVNDLIRSGRASVEVLDTTARWFGVTYSDDRPGVVAKLR 290 (303)
T ss_dssp HHHHHHHHHHHHH--------------TTC-SSCCCCH-HHHHHHHHHHTSCEEEEEECSCCCBCCSSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--------------CCC-cCCcEEh-HHHHHHHHHcCCCcEEEEEeCCceECCCCHHHHHHHHHHHH
Confidence 8876322110000 000 1122334 78898888776 7999999999999999999999988776
Q ss_pred hhh
Q 015225 272 ALF 274 (411)
Q Consensus 272 ~~~ 274 (411)
+..
T Consensus 291 ~~~ 293 (303)
T 3pnn_A 291 ELT 293 (303)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 15
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.98 E-value=5.1e-32 Score=252.70 Aligned_cols=237 Identities=19% Similarity=0.262 Sum_probs=195.1
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecc-cchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGF-YEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~-~~~~~i~~~~~~~~~~~~~~i 81 (411)
.|++|||||| .|+||+|+|...||+|+|++|+|||+|+++.|..+ ++++|+|++. ++.+.+++++.+. ++++.++
T Consensus 3 ~m~aIILAgG--~GtRl~plT~~~pK~llpi~gkpli~~~l~~l~~~-gi~~I~vv~~~~~~~~i~~~l~~g-~~~g~~i 78 (296)
T 1mc3_A 3 HMKGIILAGG--SGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA-GIREILIITTPEDKGYFQRLLGDG-SEFGIQL 78 (296)
T ss_dssp CCEEEEECCC--CCGGGHHHHTTSCGGGSEETTEETTHHHHHHHHHT-TCCEEEEEECTTTHHHHHHHHTTS-GGGTCEE
T ss_pred ccEEEEECCC--CCCcCCcccCCCCceeeEECCeeHHHHHHHHHHhC-CCCcEEEEechhHHHHHHHHHhcc-cccCceE
Confidence 4899999999 99999999999999999999999999999999997 8999998774 6667788888764 3467778
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcC
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADP 160 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~ 160 (411)
.++.++...|+++++..+++++. +++++++.||.++ +.++..+++.|.+.+..++++..++ .++..||++..|
T Consensus 79 ~~~~~~~~~G~~~al~~a~~~i~---~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v--~dp~~yg~v~~d- 152 (296)
T 1mc3_A 79 EYAEQPSPDGLAQAFIIGETFLN---GEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQV--MDPERFGVVEFD- 152 (296)
T ss_dssp EEEECSSCCCSTHHHHHTHHHHT---TSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEEC--SCCSSSBBCEEE-
T ss_pred EEeccCCCCCHHHHHHHHHHHhC---CCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEEC--CCcccCCEEEEC-
Confidence 88877778899999999999885 4678888899985 6789999999976667778887777 777889999888
Q ss_pred CCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 161 NTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 161 ~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
++++|..+.|||..+.+.+.++|+|+|++++++.+.+..+. ..+.+.+ +++++.++
T Consensus 153 ~~g~v~~~~ekp~~~~s~~~~~Giy~~~~~~l~~~~~~~~~-----------------------~~ge~~~-td~~~~~l 208 (296)
T 1mc3_A 153 DNFRAISLEEKPKQPKSNWAVTGLYFYDSKVVEYAKQVKPS-----------------------ERGELEI-TSINQMYL 208 (296)
T ss_dssp TTEEEEECCBSCSSCSCSEEEEEEEECCTHHHHHHHSCCCC-----------------------SSSSCCH-HHHHHHHH
T ss_pred CCCcEEEEEECCCCCCCCEEEEEEEEEcHHHHHHHHhcCcc-----------------------ccCCccH-HHHHHHHH
Confidence 78999999999977778899999999999998877653211 0122233 67777777
Q ss_pred CCCceEEEeec-ce-eeecCCccchhhcchHHHhh
Q 015225 241 GKKQLYTYETM-DF-WEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 241 ~~~~v~~~~~~-~~-~~~I~t~~d~~~a~~~~l~~ 273 (411)
+.+++.++... ++ |.|++|+++|.+++..+...
T Consensus 209 ~~g~~~v~~~~~g~~w~Digt~edl~~a~~~~~~~ 243 (296)
T 1mc3_A 209 EAGNLTVELLGRGFAWLDTGTHDSLIEASTFVQTV 243 (296)
T ss_dssp HTTCEEEEECCTTCEEEECCSHHHHHHHHHHHHHH
T ss_pred hcCCeEEEEeCCCCEEEeCCCHHHHHHHHHHHHHH
Confidence 77777777665 65 99999999999998766543
No 16
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.97 E-value=1.4e-31 Score=246.00 Aligned_cols=229 Identities=20% Similarity=0.345 Sum_probs=176.3
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc---cCCc
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN---ELKV 79 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~---~~~~ 79 (411)
+|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++.++ ++++|+|+++++.+.+++++.+... .+..
T Consensus 2 ~~~avIlAaG--~gtRl~~lt~~~pK~l~~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~~~~~~~~~~~ 78 (259)
T 1tzf_A 2 ASKAVILAGG--LGTRLSEETIVKPKPMVEIGGKPILWHIMKMYSVH-GIKDFIICCGYKGYVIKEYFANYFLHMSDVTF 78 (259)
T ss_dssp CCEEEEEECS--CC--------CCCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTHHHHHHHHHTHHHHHSCEEE
T ss_pred CcEEEEECCC--CcccCCCccCCCCccccEECCEEHHHHHHHHHHHC-CCCEEEEEcccCHHHHHHHHhhcccccccccc
Confidence 4899999999 99999999999999999999999999999999997 8999999998887888888876321 1110
Q ss_pred -----------------ceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCChHHHHHHHHhcCCeeEEEE
Q 015225 80 -----------------PVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFPLPDLLEAHKRYGGMGTMLV 142 (411)
Q Consensus 80 -----------------~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~~~~ 142 (411)
.+.+..+....|++++++.+++++. .+++|++++||.+++.++.++++.|.+.++.+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~--~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~ 156 (259)
T 1tzf_A 79 HMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVK--DDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTA 156 (259)
T ss_dssp EGGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTT--TSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEE
T ss_pred cccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcC--CCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEE
Confidence 1223334456799999999998883 247899999999988899999999988787777654
Q ss_pred EecCcccccceeEEEEcCCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhccc
Q 015225 143 IKVSAESAHQFGELIADPNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATR 222 (411)
Q Consensus 143 ~~~~~~~~~~~g~v~~d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (411)
. .+++.||++..| +++|..+.|||... ..+.++|+|+|++++|+.+.+.
T Consensus 157 ~----~~~~~~g~v~~~--~g~v~~~~ekp~~~-~~~~~~Giy~~~~~~l~~l~~~------------------------ 205 (259)
T 1tzf_A 157 T----FPPGRFGALDIQ--AGQVRSFQEKPKGD-GAMINGGFFVLNPSVIDLIDND------------------------ 205 (259)
T ss_dssp E----CCCCCSEEEEEE--TTEEEEEEESCSCC-SCCEECCCEEECGGGGGGCCST------------------------
T ss_pred e----cCCCCccEEEEc--CCEEEEEEecCCCC-CceEEEEEEEeCHHHHHhhccc------------------------
Confidence 3 346779988888 68999999998643 5689999999999987544210
Q ss_pred CCCCceeeeccchhhcccCCCceEEEeecceeeecCCccchhhcchHHHh
Q 015225 223 TLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 223 ~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~ 272 (411)
...+..++++.+++++++.++..+++|.+|+|++||.+++..+..
T Consensus 206 -----~~~~~~~~i~~~~~~~~v~~~~~~~~~~dI~t~~d~~~a~~~~~~ 250 (259)
T 1tzf_A 206 -----ATTWEQEPLMTLAQQGELMAFEHPGFWQPMDTLRDKVYLEGLWEK 250 (259)
T ss_dssp -----TCCTTTHHHHHHHHTTCEEEEEECSCEEECCSHHHHHHHHHHHHT
T ss_pred -----ccccHHHHHHHHHHcCCEEEEEeCcEEEeCCCHHHHHHHHHHHhc
Confidence 112336677777767799999999999999999999999877654
No 17
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.97 E-value=2.2e-31 Score=243.43 Aligned_cols=229 Identities=16% Similarity=0.209 Sum_probs=173.2
Q ss_pred EEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhcc-CCCCcEEEEecccchHHHHHHHhhhcccCCcc--eE
Q 015225 6 AVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKR-IPNLAQIFLIGFYEEREFALYVSSISNELKVP--VR 82 (411)
Q Consensus 6 aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~-~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~--i~ 82 (411)
+|||||| .|+||+|+|..+||+|+|++|+|||+|+++++.. + |+++|+|++++..+ +++++.+..+.++.+ ..
T Consensus 2 ~iIlAaG--~GtRl~plt~~~PK~llpv~gkpli~~~l~~l~~~~-gi~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~ 77 (255)
T 4evw_A 2 IVIPMAG--MSSRFFKAGYTQPKYMLEAHGQTLFEHSVNSFAAYF-ASTPFLFIVRNVYD-TAVFVREKATQLGIKQFYI 77 (255)
T ss_dssp EEEECCS--CCHHHHHTTCCSCGGGCEETTEEHHHHHHGGGGGGT-TTSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEE
T ss_pred EEEEcCC--CCcccccCCCCCCccccEECCeEHHHHHHHHHhccC-CCceEEEEECchhh-hHHHHHHHHHHcCCCCceE
Confidence 7999999 9999999999999999999999999999999999 6 89999988887655 555665433333321 24
Q ss_pred EeeCCCCCCChHHHHHHHHHhhc---cCCCeEEEEcCCccc-CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIME---ENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA 158 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~---~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 158 (411)
++.+....|++++++.+++++.+ ..+++|+|++||+++ +.++..+ ..++++++++++. .++ .||++..
T Consensus 78 ~~~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~--~~p-~yG~v~~ 149 (255)
T 4evw_A 78 AELHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQG--GGD-NWSFAKP 149 (255)
T ss_dssp EEESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEEC--CSS-CSCEEEE
T ss_pred EEeCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEec--CCC-ceeEEEE
Confidence 55577889999999999999831 125789999999987 5666553 2456778888887 454 8999999
Q ss_pred cCCCC--ceeEEeccCCCcccCcccceEEEeCHH--HHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccc
Q 015225 159 DPNTK--ELLHYTEKPETFVSDLINCGVYVFTPD--FFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQD 234 (411)
Q Consensus 159 d~~~~--~v~~~~e~~~~~~~~~~~~Giyi~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 234 (411)
| +++ +|+.+.||+ +.++++++|+|+|++. +++.+.+....... . +.+++ +.+ +|
T Consensus 150 d-~~g~~~V~~i~EK~--~~s~~~~~GiY~f~~~~~~~~~l~~~i~~~~~--~---------------~~~gE-~~l-td 207 (255)
T 4evw_A 150 E-HAGSTKVIQTAEKN--PISDLCSTGLYHFNRKEDYLEAYREYVARPSQ--E---------------WERGE-LYI-AP 207 (255)
T ss_dssp S-STTCCBEEEEESSS--CSSSEEEEEEEEESCHHHHHHHHHHHHTSCGG--G---------------CSCSC-CCS-TT
T ss_pred C-CCCCeEEEEEEecc--CccCcEEEeEEEECcHHHHHHHHHHHHhcccc--c---------------ccCCe-Eeh-HH
Confidence 8 667 999999994 3478999999999985 33444443221100 0 00112 223 89
Q ss_pred hhhcccCCC-ceEEEeec-ceeeecCCccchhhcch
Q 015225 235 ILSPLAGKK-QLYTYETM-DFWEQIKTPGMSLKCSS 268 (411)
Q Consensus 235 ~l~~l~~~~-~v~~~~~~-~~~~~I~t~~d~~~a~~ 268 (411)
+++.+++.+ ++.++..+ ++|.++++|++|.++..
T Consensus 208 ~i~~li~~g~~v~~~~~~~~~w~digt~~~l~~~~~ 243 (255)
T 4evw_A 208 LYNELIQKGLNIHYHLIARHEVIFCGVPDEYTDFLR 243 (255)
T ss_dssp HHHHHHHTTCCEEEEECCGGGCEECCSHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEEeccccEEECCCHHHHHHHHh
Confidence 999887665 78999875 89999999999988753
No 18
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.97 E-value=2.1e-31 Score=252.40 Aligned_cols=242 Identities=16% Similarity=0.241 Sum_probs=190.2
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcc------
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISN------ 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~------ 75 (411)
+.|+||||||| .|+||+|+|..+||+|+|++|+|||+|+++++..+ |+++|+|++++..+.+.+++.....
T Consensus 11 ~~~~aVIlAaG--~gtRl~plt~~~pK~ll~i~gkpli~~~l~~l~~~-gi~~iivv~~~~~~~i~~~~~~~~~~~~~l~ 87 (323)
T 2pa4_A 11 AVKTVVVPAAG--LGTRFLPATKTVPKELLPVVDTPGIELIAAEAAEL-GATRLAIITAPNKAGVLAHFERSSELEETLM 87 (323)
T ss_dssp -CCEEEEECCC--CCGGGTTGGGTSCGGGCEETTEEHHHHHHHHHHHT-TCCEEEEEECTTCHHHHHTTSCCHHHHHHHH
T ss_pred cceEEEEECCC--CccccCccccCCCceeeeECCEEHHHHHHHHHHhC-CCCEEEEEecCcHHHHHHHHhccchhhhhhh
Confidence 34899999999 99999999999999999999999999999999997 9999999998877778887754210
Q ss_pred --------------cCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccC--CChHHHHHHHHhcCCeeE
Q 015225 76 --------------ELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCS--FPLPDLLEAHKRYGGMGT 139 (411)
Q Consensus 76 --------------~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~--~~l~~~l~~~~~~~~~~~ 139 (411)
.++.++.++.+....|++++++.+++++.. .++.|++++||++++ .++..+++.|.+.++ .+
T Consensus 88 ~~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~-~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~ 165 (323)
T 2pa4_A 88 ERGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDD-DEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SV 165 (323)
T ss_dssp HTTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCS-SCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EE
T ss_pred ccchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcC-CCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cE
Confidence 023467777777778999999999988752 123499999999985 679999999987665 46
Q ss_pred EEEEecCcccccceeEEEEcC---CCC--ceeEEeccCC--CcccCcccceEEEeCHHHHHHhhhhhhcccccccccccc
Q 015225 140 MLVIKVSAESAHQFGELIADP---NTK--ELLHYTEKPE--TFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVS 212 (411)
Q Consensus 140 ~~~~~~~~~~~~~~g~v~~d~---~~~--~v~~~~e~~~--~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~ 212 (411)
+++.+.+.++.+.||++..|+ +++ +|..|.|||. ...+.+.++|+|+|++++|+.+.+.....
T Consensus 166 i~~~~~~~~~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~~~~~~~~~~GiY~~~~~~~~~l~~~~~~~---------- 235 (323)
T 2pa4_A 166 LCAVEVSEADVSKYGIFEIEADTKDSDVKKVKGMVEKPAIEDAPSRLAATGRYLLDRKIFDALRRITPGA---------- 235 (323)
T ss_dssp EEEEECCGGGGGGSEEEEEEECCSSTTEEEEEEEEESCCTTTCSCSEEEEEEEEEETHHHHHHHHCCCCG----------
T ss_pred EEEEEecccccCCccEEEeCCcccCCCceeEEEEEECCCCccccccEEEEEEEEECHHHHHHHHhhCCCC----------
Confidence 666666445677899887651 233 8999999984 44567889999999999998876542110
Q ss_pred hhhhhhhcccCCCCceeeeccchhhcccCC-CceEEEeecceeeecCCccchhhcchHHHh
Q 015225 213 SFEALQSATRTLPVDFVRLDQDILSPLAGK-KQLYTYETMDFWEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~l~~d~l~~l~~~-~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~ 272 (411)
.+.+.+ +++++.++++ .++.++..+++|.||+||++|.+++..++.
T Consensus 236 -------------~ge~~l-~d~i~~l~~~g~~v~~~~~~g~w~DIgt~~dl~~a~~~~~~ 282 (323)
T 2pa4_A 236 -------------GGELQL-TDAIDLLIDEGHPVHIVIHQGKRHDLGNPGGYIPACVDFGL 282 (323)
T ss_dssp -------------GGCCCH-HHHHHHHHHTTCCEEEEECCSEEEECSSHHHHHHHHHHHHH
T ss_pred -------------CCeEeH-HHHHHHHHHcCCCEEEEEeCCeEEeCCCHHHHHHHHHHHhh
Confidence 012223 6788877766 689999999999999999999999977654
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.96 E-value=4.3e-29 Score=234.93 Aligned_cols=250 Identities=16% Similarity=0.225 Sum_probs=158.5
Q ss_pred CC-ceEEEEEecCCCCCcccccCCC-CCCccCccc-CCcchhHhHHHHhccCCCCcEEEEecccch-HHHHHHHhhhccc
Q 015225 1 ME-KVVAVIMVGGPTKGTRFRPLSF-NTPKPLFPL-AGQPMIQHPISACKRIPNLAQIFLIGFYEE-REFALYVSSISNE 76 (411)
Q Consensus 1 m~-~~~aiIla~G~~~g~rl~plt~-~~pK~llpi-~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~-~~i~~~~~~~~~~ 76 (411)
|+ +|+||||||| .|+||+|+|. ..||+|+|+ +|+|||+|+++++..+ +++|+|++++.. +.+++++.+.
T Consensus 1 m~~~~~avIlAgG--~gtRl~plt~~~~pK~ll~i~gg~pli~~~l~~l~~~--~~~i~vv~~~~~~~~i~~~~~~~--- 73 (308)
T 2qh5_A 1 MSLKIKNILLSGG--SGKRLWPLSRSLYPKQFLKLFDHKSLFELSFKRNASL--VDETLIVCNEKHYFLALEEIKNE--- 73 (308)
T ss_dssp --CCEEEEEECC---------------CCGGGCTTBTTBCHHHHHHHHHHTT--CSEEEEEEEGGGHHHHHHHTTTT---
T ss_pred CCCccEEEEEcCC--CCccCCccCCCCCCCEEEECCCCCCHHHHHHHHHHcc--CCCEEEEEChhHHHHHHHHHHHh---
Confidence 43 5899999999 9999999997 899999999 5999999999999994 899999888753 5677777652
Q ss_pred CCc-ceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc-CCC-hHHHHHH---HHhcCCeeEEEEEecCcccc
Q 015225 77 LKV-PVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC-SFP-LPDLLEA---HKRYGGMGTMLVIKVSAESA 150 (411)
Q Consensus 77 ~~~-~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~-~~~-l~~~l~~---~~~~~~~~~~~~~~~~~~~~ 150 (411)
++. ++.++.++...|++++++.+++++. .++.|++++||.++ +.+ +..+++. |.+.++.+|+.+.+. .++
T Consensus 74 ~~~~~~~~i~~~~~~gt~~al~~a~~~l~--~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~--~~~ 149 (308)
T 2qh5_A 74 IKNKSVGFLLESLSKNTANAIALSALMSD--KEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSID--KPN 149 (308)
T ss_dssp CSSCEEEEEEESSCCCHHHHHHHHHHTSC--TTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECS--SCC
T ss_pred hCCCccEEEeCCCCCChHHHHHHHHHHhC--CCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecC--CCC
Confidence 555 5667767777899999999998873 23459999999997 555 8899887 666777888888776 666
Q ss_pred cceeEEEEcCCCCceeEEeccCCCcc--------cCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhhhcc
Q 015225 151 HQFGELIADPNTKELLHYTEKPETFV--------SDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQSAT 221 (411)
Q Consensus 151 ~~~g~v~~d~~~~~v~~~~e~~~~~~--------~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (411)
+.||++..| ++++|+.|.|||.... +.++++|+|+|+++.| +.+.+..+...+.... ..+...
T Consensus 150 ~~~g~i~~d-~~~~V~~~~Ekp~~~~~~~~~~~g~~~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~-------~~~~~~ 221 (308)
T 2qh5_A 150 TEFGYIESP-NGLDVKRFIEKPSLDKAIEFQKSGGFYFNSGMFVFQAGVFLDELKKHAPTILKGCER-------AFESLE 221 (308)
T ss_dssp TTSEEEECS-SSSBCSEEEESCCHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHHH-------HGGGCE
T ss_pred CCceEEEEC-CCCEEEEEEECCChHHHHHHhhcCCeEEEeEEEEEEHHHHHHHHHHhChHHHHHHHH-------Hhhccc
Confidence 789999877 6789999999986421 4688999999999874 6665543221110000 000000
Q ss_pred cC--CCCceeeeccchhh--------c-ccCC-CceEEEeecceeeecCCccchhhcchH
Q 015225 222 RT--LPVDFVRLDQDILS--------P-LAGK-KQLYTYETMDFWEQIKTPGMSLKCSSL 269 (411)
Q Consensus 222 ~~--~~~~~~~l~~d~l~--------~-l~~~-~~v~~~~~~~~~~~I~t~~d~~~a~~~ 269 (411)
.. ...+..++..++++ . ++++ .+++++..+++|.||+|+++|.+++..
T Consensus 222 ~~~~~e~~~~~~~~~~~~~~~~~sid~~lle~~~~v~~~~~~~~w~digt~~~l~~~~~~ 281 (308)
T 2qh5_A 222 NAYFFEKKIARLSEKSMQDLEDMSIDIALMQQSHKIKMVELNAKWSDLGNFNALFEEAAN 281 (308)
T ss_dssp EECCSSSCEEEECHHHHHTSCCCCHHHHTTTTCSCEEEEECCSCCBC-------------
T ss_pred cccccchhhhhhhHHHHhhCcccceeHHHhcCCCcEEEEECCCceeCCCCHHHHHHHhhc
Confidence 00 00011122233333 2 4544 589999999999999999999988753
No 20
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.95 E-value=1.1e-27 Score=218.92 Aligned_cols=224 Identities=17% Similarity=0.198 Sum_probs=159.2
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
+|.||||||| .|+||+|+|...||+|+|++|+|||+|+++++..+ ++++|+|++++..+.+.++... ++..+.
T Consensus 25 ~~~aiIlAaG--~gtRl~plt~~~pK~l~~i~gkpli~~~l~~l~~~-g~~~i~vv~~~~~~~i~~~~~~----~~~~iv 97 (254)
T 1jyk_A 25 RVKAIILAAG--LGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEK-GINDIIIIVGYLKEQFDYLKEK----YGVRLV 97 (254)
T ss_dssp CCEEEEEECS--CCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHT-TCCCEEEEECTTGGGGTHHHHH----HCCEEE
T ss_pred CceEEEECCC--CcccCCcccCCCCCEEeeECCEEHHHHHHHHHHHC-CCCeEEEEeCCcHHHHHHHHHh----CCcEEE
Confidence 5889999999 99999999999999999999999999999999997 8999999988765555544332 343333
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCC-hHHHHHHHHhcCCeeEEEEEecCcccc-cceeEEEEcC
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFP-LPDLLEAHKRYGGMGTMLVIKVSAESA-HQFGELIADP 160 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~ 160 (411)
...+....|++++++.+++.+. ++++++||+++..+ +..++ +.+..+++ .. .++ ..|+++ .|
T Consensus 98 ~~~~~~~~g~~~al~~a~~~~~-----~~lv~~~D~~~~~~~~~~~~----~~~~~~t~---~~--~~~~~~~~v~-~d- 161 (254)
T 1jyk_A 98 FNDKYADYNNFYSLYLVKEELA-----NSYVIDADNYLFKNMFRNDL----TRSTYFSV---YR--EDCTNEWFLV-YG- 161 (254)
T ss_dssp ECTTTTTSCTHHHHHTTGGGCT-----TEEEEETTEEESSCCCCSCC----CSEEEEEC---EE--SSCSSCCEEE-EC-
T ss_pred ECCCccCCCcHHHHHHHHHHCC-----CEEEEeCCcccCHHHHHHHH----hCCceEEE---Ec--ccCCCCeEEE-EC-
Confidence 2222345789999998888763 48899999997444 33322 22222222 22 222 357754 77
Q ss_pred CCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 161 NTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 161 ~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
++++|+.+.|++. ..+.++|+|+|+++.++.+.+..+.........+++ + .++++.+.
T Consensus 162 ~~g~v~~~~e~~~---~~~~~~Giy~~~~~~~~~l~~~l~~~~~~~~~~e~~------------------~-~d~~~~l~ 219 (254)
T 1jyk_A 162 DDYKVQDIIVDSK---AGRILSGVSFWDAPTAEKIVSFIDKAYVSGEFVDLY------------------W-DNMVKDNI 219 (254)
T ss_dssp TTCBEEEEECCCS---SEEBCCSEEEECHHHHHHHHHHHHHHHTTTCCTTCC------------------T-THHHHTTG
T ss_pred CCCeEEEEEECCC---CCcEEEEEEEEcHHHHHHHHHHHHHHHhcCCccccC------------------H-HHHHHHHH
Confidence 6889999999753 468899999999986665555443221111111111 2 66777776
Q ss_pred CCCceEEEeec-ceeeecCCccchhhcchHHH
Q 015225 241 GKKQLYTYETM-DFWEQIKTPGMSLKCSSLYL 271 (411)
Q Consensus 241 ~~~~v~~~~~~-~~~~~I~t~~d~~~a~~~~l 271 (411)
++.++.++..+ ++|.+|+|++||.++++.+.
T Consensus 220 ~~~~v~~~~~~~~~~~~Idt~edl~~a~~~l~ 251 (254)
T 1jyk_A 220 KELDVYVEELEGNSIYEIDSVQDYRKLEEILK 251 (254)
T ss_dssp GGCCEEEEECCTTSEEECCSHHHHHHHHHHHC
T ss_pred hhCCeEEEEecCCeEEEcCCHHHHHHHHHHhh
Confidence 77789998877 69999999999999987553
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.95 E-value=7.7e-27 Score=213.18 Aligned_cols=228 Identities=14% Similarity=0.152 Sum_probs=174.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
++.||||||| .|+|| | ||+|+|++|+|||+|+++.+..+ ++++|+|++. .+.+.+++.+ ++.++.
T Consensus 2 ~~~aiIlA~G--~stRl-p-----~K~L~~i~GkPli~~~l~~l~~~-~~~~ivVv~~--~~~i~~~~~~----~g~~v~ 66 (252)
T 3oam_A 2 SFTVVIPARY--QSTRL-P-----GKPLADIGGKPMIQWVYEQAMQA-GADRVIIATD--DERVEQAVQA----FGGVVC 66 (252)
T ss_dssp CEEEEEECCC--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEES--CHHHHHHHHH----TTCEEE
T ss_pred ceEEEEecCc--CCCCC-C-----CcceeeECCEEHHHHHHHHHHhC-CCCeEEEECC--HHHHHHHHHH----cCCEEE
Confidence 5899999999 99999 3 79999999999999999999997 8999999885 3567777764 566777
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccce-----eE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQF-----GE 155 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----g~ 155 (411)
+..++...|+++ +..+.+.+.....+.|++++||.++ ..++..+++.|.+.++++++++++. +++..| +.
T Consensus 67 ~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v--~~~~~~~~p~~g~ 143 (252)
T 3oam_A 67 MTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEI--EDEAEVFNPNAVK 143 (252)
T ss_dssp ECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEE--CCHHHHTCTTSCE
T ss_pred EcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeec--CCHHHhhCCCceE
Confidence 766677788887 5566666631125789999999964 6679999999988888889898887 666667 88
Q ss_pred EEEcCCCCceeEEeccCCC-------------cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhccc
Q 015225 156 LIADPNTKELLHYTEKPET-------------FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATR 222 (411)
Q Consensus 156 v~~d~~~~~v~~~~e~~~~-------------~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (411)
|..| ++++++.|.++|-. +.+.+.++|+|+|++++|+.+.+..+....+
T Consensus 144 vv~d-~~g~v~~fsr~~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~~~~~~e~----------------- 205 (252)
T 3oam_A 144 VITD-KSGYALYFSRATIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDWQPSQLEK----------------- 205 (252)
T ss_dssp EEEC-TTSBEEEEESSCSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHSCCCHHHH-----------------
T ss_pred EEEC-CCCeEEEEeCCCCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcCCCCcccc-----------------
Confidence 9999 78999999987521 2367899999999999998877643221000
Q ss_pred CCCCceeeeccchhhcccCCCceEEEeec-ceeeecCCccchhhcchHHHhh
Q 015225 223 TLPVDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 223 ~~~~~~~~l~~d~l~~l~~~~~v~~~~~~-~~~~~I~t~~d~~~a~~~~l~~ 273 (411)
.+ . -+.+..+..+.++.++... .+|.+||||+|+.++++.+.++
T Consensus 206 ---~E--~--le~lr~l~~G~~i~~~~~~~~~~~~idt~~dl~~a~~~~~~r 250 (252)
T 3oam_A 206 ---IE--C--LEQLRVLWHGEKIHVAVALEAPPAGVDTPEDLEVVRRIVAER 250 (252)
T ss_dssp ---HH--T--CTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHHT
T ss_pred ---cc--h--hHHHHHHHCCCeEEEEEecCCCCCCCCCHHHHHHHHHHHHhh
Confidence 00 0 1233434455689988654 4789999999999998766543
No 22
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.94 E-value=1.4e-26 Score=219.66 Aligned_cols=236 Identities=15% Similarity=0.249 Sum_probs=168.9
Q ss_pred eEEEEEecCCCCCcccccCC-CCCCccCcccCC-cchhHhHHHHhccCCCCcEEEEecccc-hHHHHHHHhhhcccCCcc
Q 015225 4 VVAVIMVGGPTKGTRFRPLS-FNTPKPLFPLAG-QPMIQHPISACKRIPNLAQIFLIGFYE-EREFALYVSSISNELKVP 80 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt-~~~pK~llpi~g-~pli~~~l~~l~~~~gi~~I~Iv~~~~-~~~i~~~~~~~~~~~~~~ 80 (411)
|++|||||| .|+||+|+| ...||+|+|++| +|||+|+++++..+.++++|+|++++. .+.+.+++.+.. .
T Consensus 2 m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~~~i~~~l~~~~-~---- 74 (336)
T 2x65_A 2 MKALILAGG--SGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYVERTKKELPELP-D---- 74 (336)
T ss_dssp CEEEEECCC--BCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGHHHHHHHCTTSC-G----
T ss_pred eEEEEECCC--CCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHHHHHHHHhhccc-c----
Confidence 789999999 999999999 679999999999 999999999999854799999998876 356777776531 1
Q ss_pred eEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcccCC--Ch----HHHHHHHHhcCCeeEEEEEecCccccccee
Q 015225 81 VRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSF--PL----PDLLEAHKRYGGMGTMLVIKVSAESAHQFG 154 (411)
Q Consensus 81 i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~--~l----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 154 (411)
..++.++...|+++++..+...+. .++.+++++||+++.. ++ ..+++.|.+.++.+|+...+. ...+.||
T Consensus 75 ~~ii~e~~~~gta~ai~~a~~~~~--~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~--~~~~~yG 150 (336)
T 2x65_A 75 ENIIAEPMKKNTAPACFIGTKLAD--DDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPT--RPETGYG 150 (336)
T ss_dssp GGEEEESSCCCHHHHHHHHHTTSC--TTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCC--SCCSSSE
T ss_pred ceEEeCCCCCCcHHHHHHHHHhhC--CCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeecc--cCCCCce
Confidence 123445567899999998887552 2467999999999743 44 444455666567777777665 4557899
Q ss_pred EEEEcCCC-----CceeEEeccCCCcc--------cCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhhhc
Q 015225 155 ELIADPNT-----KELLHYTEKPETFV--------SDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQSA 220 (411)
Q Consensus 155 ~v~~d~~~-----~~v~~~~e~~~~~~--------~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (411)
++..| ++ ++|..|.|||.... ..++++|+|+|+++.| +.+.+..+...+.....
T Consensus 151 ~I~~~-~~~~~~~~~V~~f~EKp~~~~a~~~~~~g~y~~n~Giy~~~~~~ll~~l~~~~p~~~~~~~~~----------- 218 (336)
T 2x65_A 151 YIEIG-EELEEGVHKVAQFREKPDLETAKKFVESGRFLWNSGMFLWKAREFIEEVKVCEPSIYENLKDV----------- 218 (336)
T ss_dssp EEEEE-EEEETTEEEEEEEEESCCHHHHHHHHHHTCEEEEEEEEEEEHHHHHHHHHHHCHHHHHHHTTC-----------
T ss_pred EEEEC-CccCCCccEEEEEEECCChHHHHHHHhcCCeEEEeeeEEEEHHHHHHHHHHHCHHHHHHHHHh-----------
Confidence 99877 33 68999999986421 2478999999999876 67665433211100000
Q ss_pred ccCCCCceeeeccchhhc---------ccC-CCceEEEeecceeeecCCccchhhc
Q 015225 221 TRTLPVDFVRLDQDILSP---------LAG-KKQLYTYETMDFWEQIKTPGMSLKC 266 (411)
Q Consensus 221 ~~~~~~~~~~l~~d~l~~---------l~~-~~~v~~~~~~~~~~~I~t~~d~~~a 266 (411)
...+. .|..+.++. +.+ ..++++++.+++|.|++++++|+++
T Consensus 219 ---~~~~e-~~~~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DiGt~~~l~~~ 270 (336)
T 2x65_A 219 ---DPRNF-EELKKAYEKVPSISVDYAVMEKSKKVRVVKADFEWSDLGNWSSVREI 270 (336)
T ss_dssp ---CTTCH-HHHHHHHHHSCCCCHHHHTTTTCSCEEEEECSSCCBCCCSHHHHHHH
T ss_pred ---hhhhh-hHHHHHHHhCccccHHHHHhcCCCeEEEEEecCCCcCCCCHHHHHhh
Confidence 00010 111333332 333 4689999999999999999999887
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.93 E-value=3.2e-26 Score=217.31 Aligned_cols=234 Identities=16% Similarity=0.234 Sum_probs=164.2
Q ss_pred CCceEEEEEecCCCCCcccccCC-CCCCccCcccCC-cchhHhHHHHhccCCCCcEEEEecccch-HHHHHHHhhhcccC
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLS-FNTPKPLFPLAG-QPMIQHPISACKRIPNLAQIFLIGFYEE-REFALYVSSISNEL 77 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt-~~~pK~llpi~g-~pli~~~l~~l~~~~gi~~I~Iv~~~~~-~~i~~~~~~~~~~~ 77 (411)
|+ |.+|||||| .|+||+|+| ...||+|+|++| +|||+|+++++..+.++++++|++++.. +.+.+++.+
T Consensus 1 M~-m~~VILAgG--~GtRl~Pls~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~~~i~~~l~~----- 72 (337)
T 2cu2_A 1 MK-TYALVMAGG--RGERLWPLSREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQEAVARPYADG----- 72 (337)
T ss_dssp CC-EEEEEECCC--CCGGGTTTCBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGHHHHGGGCSS-----
T ss_pred CC-eEEEEEcCC--CcccCCccCCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHHHHHHHHhcc-----
Confidence 54 899999999 999999999 589999999999 9999999999998547999999988653 344444432
Q ss_pred CcceEEeeCCCCCCChHHHHHHHHHhhcc-CCCeEEEEcCCcccCC--ChHHHHHH----HHhcCCeeEEEEEecCcccc
Q 015225 78 KVPVRYLKEDKPHGSAGGLYYFRDMIMEE-NPSHIILLNCDVCCSF--PLPDLLEA----HKRYGGMGTMLVIKVSAESA 150 (411)
Q Consensus 78 ~~~i~~v~~~~~~g~~~~l~~~~~~i~~~-~~~~~lv~~~D~i~~~--~l~~~l~~----~~~~~~~~~~~~~~~~~~~~ 150 (411)
..+ +.++...|++.++..+.. +... .++.+++++||+++.. .+..+++. |.+ ++.+|+...+. ...
T Consensus 73 -~~~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~--~~~ 145 (337)
T 2cu2_A 73 -IRL--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPT--RPE 145 (337)
T ss_dssp -SEE--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCS--SCC
T ss_pred -Cce--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccC--CCC
Confidence 122 334567799999988877 5321 2578999999999743 35444443 433 56777777665 566
Q ss_pred cceeEEEEcCCC----CceeEEeccCCCcc------c-CcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhh
Q 015225 151 HQFGELIADPNT----KELLHYTEKPETFV------S-DLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQ 218 (411)
Q Consensus 151 ~~~g~v~~d~~~----~~v~~~~e~~~~~~------~-~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~ 218 (411)
+.||++..| ++ ++|..|.|||.... + .++++|+|+|+++.| +.+.+..+......... .
T Consensus 146 t~yG~I~~~-~~~~~~~~V~~f~EKp~~~~a~~~~~~g~~~n~Giy~f~~~~ll~~l~~~~p~~~~~~~~~-------~- 216 (337)
T 2cu2_A 146 TEYGYIRLG-PREGAWYRGEGFVEKPSYAEALEYIRKGYVWNGGVFAFAPATMAELFRRHLPSHHEALERL-------L- 216 (337)
T ss_dssp SSSCEEEEE-EEETTEEEEEEEECCCCHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHH-------H-
T ss_pred CCceEEEEC-CcccccCeEEEEEeCCChHHHHHHhhcCCEEEEEEEEEeHHHHHHHHHHHCHHHHHHHHHH-------h-
Confidence 789999877 44 78999999986321 1 688999999999876 77766543221100000 0
Q ss_pred hcccCCCCceeeeccchhh--------c-cc-CCCceEEEeecceeeecCCccchhhcc
Q 015225 219 SATRTLPVDFVRLDQDILS--------P-LA-GKKQLYTYETMDFWEQIKTPGMSLKCS 267 (411)
Q Consensus 219 ~~~~~~~~~~~~l~~d~l~--------~-l~-~~~~v~~~~~~~~~~~I~t~~d~~~a~ 267 (411)
.++ .+ .+.++ + ++ +..++++++.+++|.|++++++|+++.
T Consensus 217 ------~~~--~~-~~~~~~~~~~sidy~vme~~~~v~v~~~~~~W~DvGt~~~l~~~~ 266 (337)
T 2cu2_A 217 ------AGA--SL-EEVYAGLPKISIDYGVMEKAERVRVVLGRFPWDDVGNWRALERVF 266 (337)
T ss_dssp ------TTC--CH-HHHHHTSCCCCHHHHTGGGCSSEEEEEECSCEECCCSTTHHHHHH
T ss_pred ------cCC--cH-HHHHhhCccchHHHHHhhCCCcEEEEEeCCcEEcCCCHHHHHHHh
Confidence 000 00 11111 1 23 345899999999999999999988774
No 24
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.92 E-value=1.1e-24 Score=198.36 Aligned_cols=225 Identities=14% Similarity=0.119 Sum_probs=161.1
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
|++.||||||| .|+||. ||+|+|++|+|||+|+++.+.++ ++++|+|++. .+.+.++++. ++.++
T Consensus 8 M~~~aIIlA~G--~stRl~------~K~L~~i~GkPli~~~l~~l~~~-~i~~VvVvt~--~~~i~~~~~~----~g~~v 72 (256)
T 3tqd_A 8 MEFRVIIPARF--DSTRLP------GKALVDIAGKPMIQHVYESAIKS-GAEEVVIATD--DKRIRQVAED----FGAVV 72 (256)
T ss_dssp -CCEEEEECCC--C---CT------TGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEES--CHHHHHHHHH----TTCEE
T ss_pred CCceEEEEcCC--CCCCCC------CCCeeeECCchHHHHHHHHHHhC-CCCEEEEECC--HHHHHHHHHH----cCCeE
Confidence 46789999999 999994 79999999999999999999997 8999999875 3556777654 56666
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhc-CCeeEEEEEecCc----cccccee
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRY-GGMGTMLVIKVSA----ESAHQFG 154 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~-~~~~~~~~~~~~~----~~~~~~g 154 (411)
.+..++...|+++ +..+.+.+.....+.++++.||.++ ...+..+++.+.+. ++++++++.+... .++...+
T Consensus 73 ~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vk 151 (256)
T 3tqd_A 73 CMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTK 151 (256)
T ss_dssp EECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCE
T ss_pred EEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccE
Confidence 6666666677765 7777777732235889999999975 56799999998764 5566666666521 1222333
Q ss_pred EEEEcCCCCceeEEeccCCC-c-------------ccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhc
Q 015225 155 ELIADPNTKELLHYTEKPET-F-------------VSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSA 220 (411)
Q Consensus 155 ~v~~d~~~~~v~~~~e~~~~-~-------------~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (411)
|..| ++++++.|.++|.. + .+.+...|+|.|++++++.+.+..+...+.
T Consensus 152 -vv~d-~~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~s~lE~--------------- 214 (256)
T 3tqd_A 152 -VVLN-RRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDACPAEK--------------- 214 (256)
T ss_dssp -EEEC-TTSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHHH---------------
T ss_pred -EEEC-CCCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCCCcccc---------------
Confidence 5678 78999999998641 1 256889999999999999887653221000
Q ss_pred ccCCCCceeeeccchhhcccCCCceEEEeecce-eeecCCccchhhcch
Q 015225 221 TRTLPVDFVRLDQDILSPLAGKKQLYTYETMDF-WEQIKTPGMSLKCSS 268 (411)
Q Consensus 221 ~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~-~~~I~t~~d~~~a~~ 268 (411)
... -+.++.|..+.++.++..+++ |.+||||+||.++++
T Consensus 215 -------~e~--leqlr~le~G~~i~~~~~~~~~~~~idtpeDl~~a~~ 254 (256)
T 3tqd_A 215 -------MEA--LEQLRILWHGGRIHMVVAKSKCPPGVDTEEDLERVRA 254 (256)
T ss_dssp -------HHT--CTTHHHHHTTCCCEEEECSSCCCCCCSSHHHHHHHHT
T ss_pred -------hhh--hHHHHHHHCCCeEEEEEeCCCCCCCcCCHHHHHHHHH
Confidence 000 123444556669999998874 899999999988864
No 25
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.92 E-value=2.6e-24 Score=196.72 Aligned_cols=224 Identities=15% Similarity=0.111 Sum_probs=165.7
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
|++.||||||| .|+||. +|+|+|++|+|||+|+++.+.++ ++++|+|++. .+.+.++++. ++.++
T Consensus 17 M~~~aIIlA~G--~stRlp------~K~L~~i~GkPmi~~~l~~l~~~-~i~~IvV~t~--~~~i~~~~~~----~g~~v 81 (264)
T 3k8d_A 17 MSFVVIIPARY--ASTRLP------GKPLVDINGKPMIVHVLERARES-GAERIIVATD--HEDVARAVEA----AGGEV 81 (264)
T ss_dssp -CCEEEEECCS--CCSSST------TGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEES--CHHHHHHHHH----TTCEE
T ss_pred CceEEEEEcCC--CCCCCC------CcceeeECCeEHHHHHHHHHHhC-CCCEEEEECC--HHHHHHHHHH----cCCEE
Confidence 45889999999 999992 49999999999999999999997 8999999884 3456666654 46666
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCccccccee-----
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFG----- 154 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g----- 154 (411)
.+..+....|++. +..+.+.+.....+.++++.||.++ ...+..+++.+.+.++++++++.+. +++..++
T Consensus 82 ~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v--~d~~~~~~p~~v 158 (264)
T 3k8d_A 82 CMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPI--HNAEEAFNPNAV 158 (264)
T ss_dssp EECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEEC--CSHHHHTCTTSC
T ss_pred EEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEc--CCHHHccCCCce
Confidence 6655666677766 7777777632235889999999975 5679999999988788888888887 4433332
Q ss_pred EEEEcCCCCceeEEeccCCC-------------cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcc
Q 015225 155 ELIADPNTKELLHYTEKPET-------------FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSAT 221 (411)
Q Consensus 155 ~v~~d~~~~~v~~~~e~~~~-------------~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (411)
.|..| ++++++.|.++|.. +.+.+.++|+|.|++++++.+....+...+
T Consensus 159 kVv~d-~~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~~~lE----------------- 220 (264)
T 3k8d_A 159 KVVLD-AEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLE----------------- 220 (264)
T ss_dssp EEEEC-TTSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCCCHHH-----------------
T ss_pred EEEEC-CCCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCCChhh-----------------
Confidence 36678 79999999998631 125688999999999999887653211100
Q ss_pred cCCCCceeeeccchhhcccCCCceEEEee-cceeeecCCccchhhcch
Q 015225 222 RTLPVDFVRLDQDILSPLAGKKQLYTYET-MDFWEQIKTPGMSLKCSS 268 (411)
Q Consensus 222 ~~~~~~~~~l~~d~l~~l~~~~~v~~~~~-~~~~~~I~t~~d~~~a~~ 268 (411)
.... -+.+..+..+.++.++.. ..+|.+|+||+|+.+++.
T Consensus 221 -----~~e~--leqlr~le~G~~I~~~~~~~~~~~~IdtpeDl~~a~~ 261 (264)
T 3k8d_A 221 -----HIEM--LEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLERVRA 261 (264)
T ss_dssp -----HHHT--CTTHHHHHTTCCEEEEECSCCCSCCCCSHHHHHHHHH
T ss_pred -----hHHH--HHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 0000 123444455668999855 447899999999998865
No 26
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.89 E-value=1.9e-22 Score=183.38 Aligned_cols=225 Identities=12% Similarity=0.071 Sum_probs=161.7
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHH-HHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPI-SACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l-~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
..||||||| .|+||. +|+|++++|+|||+|++ +.+.+. ++++|+|++++ +.+.+++.. ++.++.
T Consensus 2 ~~aiIlA~G--~stR~~------~K~L~~i~GkPli~~~i~~~~~~~-~~~~vvVvt~~--~~i~~~~~~----~g~~v~ 66 (253)
T 4fcu_A 2 KHIVIPARF--SSSRLP------GKPLLLIHDRPMILRVVDQAKKVE-GFDDLCVATDD--ERIAEICRA----EGVDVV 66 (253)
T ss_dssp EEEEEECCS--CCTTST------TGGGSEETTEEHHHHHHHHHHTCT-TCCEEEEEESC--HHHHHHHHT----TTCCEE
T ss_pred eEEEEEeCC--CCCCCC------CCceeeECCeEhHHHHHHHHHHhc-CCCEEEEECCH--HHHHHHHHH----cCCeEE
Confidence 469999999 999996 49999999999999999 999996 89999998863 456666643 566666
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcC-Ce-eEEEEEecC---cccccceeE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYG-GM-GTMLVIKVS---AESAHQFGE 155 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~-~~-~~~~~~~~~---~~~~~~~g~ 155 (411)
+..+....|+ +++..+.+.+.....+.++++.||.++ ...+..+++.+.+.. .. +|+++.-.. ..++..+ .
T Consensus 67 ~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~~~-k 144 (253)
T 4fcu_A 67 LTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIV-K 144 (253)
T ss_dssp ECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTTSC-E
T ss_pred EeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCCcc-E
Confidence 5555555565 477888887742235789999999975 567999999998763 33 444443111 1344443 4
Q ss_pred EEEcCCCCceeEEeccCC----C---------cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhccc
Q 015225 156 LIADPNTKELLHYTEKPE----T---------FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATR 222 (411)
Q Consensus 156 v~~d~~~~~v~~~~e~~~----~---------~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (411)
|..| ++|+++.|.++|- . +...+.++|+|+|++++|..+.+..+.
T Consensus 145 vv~d-~~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~~~~~~--------------------- 202 (253)
T 4fcu_A 145 VVMS-KQNEALYFSRATIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYVTWEMG--------------------- 202 (253)
T ss_dssp EEEC-TTSBEEEEESSCCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHTTSCCC---------------------
T ss_pred EEEC-CCCeEEEecCCCCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHHhCCCC---------------------
Confidence 6777 7899999998752 1 234578999999999999887643111
Q ss_pred CCCCceeeeccc---hhhcccCCCceEEEeecce-eeecCCccchhhcchHHHhh
Q 015225 223 TLPVDFVRLDQD---ILSPLAGKKQLYTYETMDF-WEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 223 ~~~~~~~~l~~d---~l~~l~~~~~v~~~~~~~~-~~~I~t~~d~~~a~~~~l~~ 273 (411)
. +.+ .+ .+..+..+.+++++..+++ |.+|+||+|+.++++.+.++
T Consensus 203 ----~-le~-~e~le~lr~l~~G~~I~~~~~~~~~~~~IdtpeDL~~a~~~l~~r 251 (253)
T 4fcu_A 203 ----K-LEK-LESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVES 251 (253)
T ss_dssp ----H-HHH-HHTCTTHHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHTSCGGG
T ss_pred ----c-ccc-hhHHHHHHHHHCCCceEEEEeCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 1 101 22 2333345669999999998 99999999999998655443
No 27
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.89 E-value=1.4e-22 Score=182.72 Aligned_cols=213 Identities=15% Similarity=0.215 Sum_probs=135.8
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
|++|.||||||| .|+||+|+ ||+|+|++|+|||+|+++.+..+ +++|+|++ +..+.+.+++. +.++.+
T Consensus 16 m~~~~~iIlA~G--~g~R~~~~----~K~l~~i~g~pli~~~l~~l~~~--~~~i~vv~-~~~~~~~~~~~---~~~~~~ 83 (232)
T 2xme_A 16 IKLMKAVILAAG--LGTRLGGV----PKPLVRVGGCEIILRTMKLLSPH--VSEFIIVA-SRYADDIDAFL---KDKGFN 83 (232)
T ss_dssp CCCEEEEEEECC--------CC----CGGGCEETTEEHHHHHHHHHGGG--EEEEEEEE-STTHHHHHHHH---TTSCCC
T ss_pred cccceEEEECCc--CcCcCCCC----CcEEeEECCEEHHHHHHHHHHHh--CCEEEEEe-CChHHHHHHHH---HhcCCc
Confidence 677999999999 99999885 99999999999999999999984 89999888 55555666643 235556
Q ss_pred eEEeeCCC-CCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEc
Q 015225 81 VRYLKEDK-PHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIAD 159 (411)
Q Consensus 81 i~~v~~~~-~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d 159 (411)
+.++.+.. ..|++++++.+++.+. +++++++||.+++.+ +++...+.. . +++.......+...++.+..+
T Consensus 84 ~~~v~~~~~~~g~~~~i~~a~~~~~----~~~lv~~~D~p~~~~---~~~~l~~~~-~-~~~~~~~~~~~~~~~~~v~~~ 154 (232)
T 2xme_A 84 YKIVRHDRPEKGNGYSLLVAKNHVE----DRFILTMGDHVYSQQ---FIEKAVRGE-G-VIADREPRFVDIGEATKIRVE 154 (232)
T ss_dssp EEEEECSCGGGCHHHHHHTTGGGCC----SSEEEEETTEEECHH---HHHHHTTCC-E-EEEESSCSSSCTTTSCEEEEE
T ss_pred EEEEECCCCCCCcHHHHHHHHHHCC----CCEEEEcCCcccCHH---HHHHHHhCC-C-cEEEccccccCCCcceEEEEc
Confidence 77776544 3689999999988774 679999999987322 233322221 2 222211111223445666666
Q ss_pred CCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhcc
Q 015225 160 PNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPL 239 (411)
Q Consensus 160 ~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l 239 (411)
++++..+.+++. .+++.++|+|++++++|+.+.+.... +...+ .++++
T Consensus 155 --~g~v~~~~~~~~--~~~~~~~g~~~~~~~~~~~l~~~~~~-------------------------g~~~l-~~ll~-- 202 (232)
T 2xme_A 155 --DGRVAKIGKDLR--EFDCVDTGFFVLDDSIFEHAEKLRDR-------------------------EEIPL-SEIVK-- 202 (232)
T ss_dssp --TTEEEEEETTCS--SCSEEEEEEEEECTTHHHHHGGGTTS-------------------------SCCCH-HHHHH--
T ss_pred --CCEEEEeecCCC--CcceEEEEEEEECHHHHHHHHHHHhc-------------------------ChhHH-HHHHH--
Confidence 689999988764 35677899999999999877654311 11112 33333
Q ss_pred cCCCceEEEeec-ceeeecCCccchhhcch
Q 015225 240 AGKKQLYTYETM-DFWEQIKTPGMSLKCSS 268 (411)
Q Consensus 240 ~~~~~v~~~~~~-~~~~~I~t~~d~~~a~~ 268 (411)
.+++..+..+ ++|.+|+||+||.+++.
T Consensus 203 --~~~v~~~~~~~~~~~dI~tpeDl~~a~~ 230 (232)
T 2xme_A 203 --LARLPVTYVDGELWMDVDTKEDVRRANR 230 (232)
T ss_dssp --HHTCBEEECCSCCEEEEECC--------
T ss_pred --cCCEEEEEECCCCEEeCCCHHHHHHHHh
Confidence 2345555554 68999999999988764
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.88 E-value=1e-21 Score=180.38 Aligned_cols=227 Identities=14% Similarity=0.138 Sum_probs=157.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
++.||||||| .|+||. +|+|+|++|+|||+|+++.+..+ ++++|+|++++ +.+.+++.. ++..+.
T Consensus 2 ~~~aiIlA~G--~g~R~~------~K~l~~~~gkpli~~~l~~l~~~-~~~~ivvv~~~--~~i~~~~~~----~~~~~~ 66 (262)
T 1vic_A 2 SFTVIIPARF--ASSRLP------GKPLADIKGKPMIQHVFEKALQS-GASRVIIATDN--ENVADVAKS----FGAEVC 66 (262)
T ss_dssp CCEEEEECCC--CCSSST------TGGGCEETTEEHHHHHHHHHHHT-TCSEEEEEESC--HHHHHHHHH----TTCEEE
T ss_pred CcEEEEEcCC--CCCCCC------CCccccCCCeEHHHHHHHHHHhC-CCceEEEECCc--HHHHHHHHh----cCCEEE
Confidence 4899999999 999994 49999999999999999999997 88999998874 346666654 344442
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccc-----cceeE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESA-----HQFGE 155 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~g~ 155 (411)
..++....|++ .+..+.+.+.....+.+++++||.++ ..++..+++.+.+.++++++++.+. .++ ..+..
T Consensus 67 ~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 143 (262)
T 1vic_A 67 MTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKI--HDAEELFNPNAVK 143 (262)
T ss_dssp ECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEEC--CCHHHHTCTTSCE
T ss_pred ECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEec--CCHHHhcCCCceE
Confidence 22223344554 45566666642235789999999974 5678999999888777877777776 332 34455
Q ss_pred EEEcCCCCceeEEeccC-----------------CCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhh
Q 015225 156 LIADPNTKELLHYTEKP-----------------ETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQ 218 (411)
Q Consensus 156 v~~d~~~~~v~~~~e~~-----------------~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 218 (411)
+..| ++++++.|.+++ +.+...+.++|+|+|+++.+..+........
T Consensus 144 ~~~~-~~g~v~~f~~~~~~~~r~~~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~~~~~~~~--------------- 207 (262)
T 1vic_A 144 VLTD-KDGYVLYFSRSVIPYDRDQFMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYVQWAPTQL--------------- 207 (262)
T ss_dssp EEEC-TTSBEEEEESSCSSCCHHHHTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHHHSCCCHH---------------
T ss_pred EEEC-CCCCEeeeecCCCCcCCccccccccccccccccceEEEEEEEEeeHHHHHHHHhCCCCch---------------
Confidence 5556 678998887754 2233467899999999988876543211100
Q ss_pred hcccCCCCceeeeccchhhcccCCCceEEEeec-ceeeecCCccchhhcchHHHh
Q 015225 219 SATRTLPVDFVRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 219 ~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~-~~~~~I~t~~d~~~a~~~~l~ 272 (411)
+...+... +..+..+.++.++..+ ++|.+|+||+||..++..+..
T Consensus 208 --------~~~e~~~~-~~~l~~g~~v~~~~~~~~~~~dI~tpeDl~~a~~~l~~ 253 (262)
T 1vic_A 208 --------ENLEKLEQ-LRVLYNGERIHVELAKEVPAVGVDTAEDLEKVRAILAA 253 (262)
T ss_dssp --------HHHHTCTT-HHHHHTTCCEEEEECSSCCCCCCCSHHHHHHHHHHHHH
T ss_pred --------hhhhhHHH-HHHHHCCCeEEEEEeCCCCCCCCCCHHHHHHHHHHHHh
Confidence 00001012 2222245689999988 799999999999999876644
No 29
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.88 E-value=7.3e-22 Score=178.22 Aligned_cols=220 Identities=17% Similarity=0.181 Sum_probs=151.4
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
++.||||||| .|+||+ ||+|+|++|+|||+|+++.+.++ +++|+|++++ +.+.++++. + .++.
T Consensus 2 ~~~aiIlA~G--~g~R~~------~K~l~~i~g~pli~~~l~~~~~~--~~~i~v~~~~--~~i~~~~~~----~-~~~~ 64 (234)
T 2y6p_A 2 RRAVIIPARL--GSTRLK------EKPLKNLLGKPLIRWVVEGLVKT--GERVILATDS--ERVKEVVED----L-CEVF 64 (234)
T ss_dssp CEEEEEECCS--CCTTTT------TGGGCEETTEEHHHHHHHHHHTT--TSCEEEEESC--HHHHHHHTT----T-SEEE
T ss_pred ceEEEEEcCC--CCCCCC------CCcceeECCEEHHHHHHHHHHHh--CCEEEEECCh--HHHHHHHHh----c-eEEE
Confidence 4899999999 999996 79999999999999999999984 8999988875 456676654 2 3444
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCcc-cC-CChHHHHHHHHhcCCeeEEEEEecC-cccccceeEEEEc
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVC-CS-FPLPDLLEAHKRYGGMGTMLVIKVS-AESAHQFGELIAD 159 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i-~~-~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~g~v~~d 159 (411)
+..+....|+++++ .+++.+. .+.+++++||.+ .+ .++..+++.|.+.+..++++..... ..++..++ +..|
T Consensus 65 ~~~~~~~~g~~~~~-~~~~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 139 (234)
T 2y6p_A 65 LTPSDLPSGSDRVL-YVVRDLD---VDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKEAYERPEDVK-VVLD 139 (234)
T ss_dssp ECCTTCCSHHHHHH-HHHTTCC---CSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSGGGGCTTSCE-EEEC
T ss_pred ECCcccccchHHHH-HHHHhCC---CCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHHHhcCCCceE-EEEc
Confidence 44344456677655 4555443 578999999995 44 6799999999877644454444210 01233333 4456
Q ss_pred CCCCceeEEeccCCC-cc-----cCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeecc
Q 015225 160 PNTKELLHYTEKPET-FV-----SDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQ 233 (411)
Q Consensus 160 ~~~~~v~~~~e~~~~-~~-----~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (411)
+++++..+.++|.. .. ..+.++|+|+|+++.+..+.+....... . .+. + .
T Consensus 140 -~~g~v~~~~e~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~~~~~~~~---~-----------------~d~--~-~ 195 (234)
T 2y6p_A 140 -REGYALYFSRSPIPYFRKNDTFYPLKHVGIYGFRKETLMEFGAMPPSKLE---Q-----------------IEG--L-E 195 (234)
T ss_dssp -TTSBEEEEESSCCSCCSSCCSSCCEEEEEEEEEEHHHHHHHHHSCCCHHH---H-----------------HHT--C-T
T ss_pred -CCCCEeeeecCCCCcccccccceeeEEEEEEEcCHHHHHHHHhCCCCccc---h-----------------hhH--H-H
Confidence 67899999998632 11 3567999999999987665532110000 0 000 1 1
Q ss_pred chhhcccCCCceEEEeecceeeecCCccchhhcchH
Q 015225 234 DILSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSSL 269 (411)
Q Consensus 234 d~l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~ 269 (411)
.+..+.++.++.++..+++|.+|+||+||..++..
T Consensus 196 -~~~~~~~g~~v~~~~~~~~~~dI~t~~dl~~a~~~ 230 (234)
T 2y6p_A 196 -QLRLLENGIKIKVLITENYYHGVDTEEDLKIVEEK 230 (234)
T ss_dssp -HHHHHHTTCCCEEEECCSCCCCCCSHHHHHHHHHH
T ss_pred -HHHHHHCCCeEEEEEeCCcccCCCCHHHHHHHHHH
Confidence 12333456689999999999999999999988654
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.88 E-value=1.5e-21 Score=177.41 Aligned_cols=224 Identities=19% Similarity=0.221 Sum_probs=154.8
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCC-cEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNL-AQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi-~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
++.||||||| .|+|| | ||+|+|++|+|||+|+++.+.++ ++ ++|+|++++ +.+.+++.. ++.++
T Consensus 2 ~~~aiIlA~G--~~~R~-~-----~K~l~~i~g~pli~~~i~~~~~~-~~~~~ivvv~~~--~~i~~~~~~----~~~~~ 66 (245)
T 1h7e_A 2 KAVIVIPARY--GSSRL-P-----GKPLLDIVGKPMIQHVYERALQV-AGVAEVWVATDD--PRVEQAVQA----FGGKA 66 (245)
T ss_dssp CEEEEEECCS--CCSSS-T-----TGGGCEETTEEHHHHHHHHHHTC-TTCCEEEEEESC--HHHHHHHHH----TTCEE
T ss_pred CeEEEEEcCC--cCCCC-C-----CCcccccCCchHHHHHHHHHHhC-CCCCeEEEECCc--HHHHHHHHH----cCCeE
Confidence 4899999999 99999 5 89999999999999999999997 75 999999875 456666654 34444
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhc-CCeeEEEEEecCccc--ccceeEE
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRY-GGMGTMLVIKVSAES--AHQFGEL 156 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~--~~~~g~v 156 (411)
....++...|+++ +..+.+.+. .+.+++++||.++ ...+..+++.+.+. ++++++++.+..... ...+-.+
T Consensus 67 ~~~~~~~~~g~~~-~~~~~~~~~---~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (245)
T 1h7e_A 67 IMTRNDHESGTDR-LVEVMHKVE---ADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAISAAEAAEPSTVKV 142 (245)
T ss_dssp EECCSCCSSHHHH-HHHHHHHSC---CSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEECHHHHTCTTSCEE
T ss_pred EeCCCccCCcHHH-HHHHHHhCC---CCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCCHHHhcCCCCcEE
Confidence 3322344556654 445555553 5789999999975 55689999998877 677776666541010 1112223
Q ss_pred EEcCCCCceeEEeccCCC-c-----ccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceee
Q 015225 157 IADPNTKELLHYTEKPET-F-----VSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVR 230 (411)
Q Consensus 157 ~~d~~~~~v~~~~e~~~~-~-----~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (411)
..+ +++++..+.+++.. . .+.+.++|+|+|+++.+..+.+. . .+.+.
T Consensus 143 ~~~-~~g~~~~~~~~~~~~~r~~~~~~~~~~~g~y~~~~~~l~~~~~~-~-------------------------~~~~~ 195 (245)
T 1h7e_A 143 VVN-TRQDALYFSRSPIPYPRNAEKARYLKHVGIYAYRRDVLQNYSQL-P-------------------------ESMPE 195 (245)
T ss_dssp EEC-TTCBEEEEESSCSSCCTTGGGCCEEEEEEEEEEEHHHHHHGGGS-C-------------------------CCHHH
T ss_pred EEC-CCCcEEEeecCCCCCCcccccCceeEEEEEEEcCHHHHHHHHhC-C-------------------------CCccc
Confidence 335 57899988876321 1 12567999999999877544321 1 01111
Q ss_pred eccchhhcc---cCCCceEEEeecceeeecCCccchhhcchHHHhh
Q 015225 231 LDQDILSPL---AGKKQLYTYETMDFWEQIKTPGMSLKCSSLYLAL 273 (411)
Q Consensus 231 l~~d~l~~l---~~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~ 273 (411)
+ +|.++.+ ..+.++.++..++.|.+|+||+||..++..+.++
T Consensus 196 ~-td~~~~~~~~~~g~~v~~~~~~~~~~dIdtp~Dl~~a~~~l~~~ 240 (245)
T 1h7e_A 196 Q-AESLEQLRLMNAGINIRTFEVAATGPGVDTPACLEKVRALMAQE 240 (245)
T ss_dssp H-HHTCTTHHHHHTTCCEEEEECCCCCCCSSSHHHHHHHHHHHHHH
T ss_pred c-chhhHHHHHHHCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHh
Confidence 2 4444433 2356899999889999999999999998766544
No 31
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.83 E-value=3.4e-19 Score=173.99 Aligned_cols=189 Identities=15% Similarity=0.176 Sum_probs=143.8
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccC-CcchhHhHHHHhccCC---C--CcEEEEecccchHHHHHHHhhhcc
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA-GQPMIQHPISACKRIP---N--LAQIFLIGFYEEREFALYVSSISN 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~~---g--i~~I~Iv~~~~~~~i~~~~~~~~~ 75 (411)
.++.+|||||| .||||+. ..||+|+|+. |+|++++.++++..+. | +..+++.+.+..+.+++|++++ +
T Consensus 78 ~k~~vviLAGG--lGTRLg~---~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t~e~t~~~f~~~-~ 151 (469)
T 2icy_A 78 DKLVVLKLNGG--LGTTMGC---TGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNTHDDTHKIVEKY-T 151 (469)
T ss_dssp TTEEEEEEECC--BSGGGTC---CSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTTHHHHHHHHGGG-T
T ss_pred ccceEEEEcCC--ccccCCC---CCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCCHHHHHHHHHhc-c
Confidence 46899999999 9999964 8899999999 9999999999998751 2 6666666667688899999875 5
Q ss_pred cCCcceEEeeC------------------------CCCCCChHHHHHH-----HHHhhccCCCeEEEEcCCcccCCChHH
Q 015225 76 ELKVPVRYLKE------------------------DKPHGSAGGLYYF-----RDMIMEENPSHIILLNCDVCCSFPLPD 126 (411)
Q Consensus 76 ~~~~~i~~v~~------------------------~~~~g~~~~l~~~-----~~~i~~~~~~~~lv~~~D~i~~~~l~~ 126 (411)
.++.++.+..| ..+.|+++.+... ++.+.....++++|.++|.+.......
T Consensus 152 ~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ 231 (469)
T 2icy_A 152 NSNVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLT 231 (469)
T ss_dssp TSSSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHH
T ss_pred cCCceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHH
Confidence 67888886644 2467999988754 333322335899999999987654457
Q ss_pred HHHHHHhcCCeeEEEEEecCcccc-cceeEEEEcCCCCceeEEeccCCC--------cccCcccceEEEeCHHHHHHhhh
Q 015225 127 LLEAHKRYGGMGTMLVIKVSAESA-HQFGELIADPNTKELLHYTEKPET--------FVSDLINCGVYVFTPDFFTAIQG 197 (411)
Q Consensus 127 ~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~~~~~v~~~~e~~~~--------~~~~~~~~Giyi~~~~~~~~l~~ 197 (411)
++.+|.++++++++.+++. ..+ ..+|.+.......+++++.|+|.. ....+.|+|+|+|++++++.+.+
T Consensus 232 ll~~~~~~~a~~t~~v~~k--~~~~~~~Gvl~~~dg~~~vvE~~e~p~~~~~e~k~~~~~~~~N~g~y~~~~~~L~~i~~ 309 (469)
T 2icy_A 232 ILKHLIQNKNEYCMEVTPK--TLADVKGGTLISYEGKVQLLEIAQVPDEHVNEFKSIEKFKIFNTNNLWVNLKAIKKLVE 309 (469)
T ss_dssp HHHHHHHHTCSEEEEEEEC--CTTCCSSCEEEEETTEEEEECGGGSCGGGHHHHHSSSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHcCCCeeEEEEEe--ccCCCceeEEEEECCEEEEEEEeccChhhhhhhccccccceeeEEEEEEcHHHHHHHHh
Confidence 8899999999999998886 554 468887754122246777777643 23457799999999999887765
Q ss_pred h
Q 015225 198 V 198 (411)
Q Consensus 198 ~ 198 (411)
.
T Consensus 310 ~ 310 (469)
T 2icy_A 310 A 310 (469)
T ss_dssp T
T ss_pred c
Confidence 4
No 32
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.82 E-value=9.4e-20 Score=165.58 Aligned_cols=227 Identities=15% Similarity=0.104 Sum_probs=148.4
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchH-HHHHHHhhhcccCCc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEER-EFALYVSSISNELKV 79 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~-~i~~~~~~~~~~~~~ 79 (411)
|+++.||||||| .|+||++ ..+||+|+|++|+|||+|+++.+..++.+++|+|+++.... .+++.+..+. ++.
T Consensus 1 M~~~~aIIlAaG--~g~Rm~~--~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~~~~~~~~~~~~--~~~ 74 (246)
T 3f1c_A 1 MSLIYAQILAGG--KGTRMGN--VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYI--SDD 74 (246)
T ss_dssp -CCEEEEEECC-------C-C--SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGHHHHHHHHHHHC--CCT
T ss_pred CCccEEEEECCc--cccccCC--CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHHHHHHHHHHHhC--CCC
Confidence 888999999999 9999986 46799999999999999999999997339999998886543 3445554421 223
Q ss_pred ceEEeeCCCCCCChHHHHHHHHHhhcc----CCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccce
Q 015225 80 PVRYLKEDKPHGSAGGLYYFRDMIMEE----NPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQF 153 (411)
Q Consensus 80 ~i~~v~~~~~~g~~~~l~~~~~~i~~~----~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (411)
.+.++. ...+..++++.+++.+... ..+.++++.||.++ ...+..+++.+.+.++. +.+.+. .+
T Consensus 75 ~~~~~~--~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~--i~~~~~--~d---- 144 (246)
T 3f1c_A 75 RIVVIE--GGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAV--DTVIEA--LD---- 144 (246)
T ss_dssp TEEEEE--CCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEE--EEEEEC--SS----
T ss_pred CEEEEC--CCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCE--EEEEec--cc----
Confidence 455554 2346788999999988631 25789999999975 55699999999876543 344444 33
Q ss_pred eEEEEcCCCCceeEEeccCCCcccCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhhhcccCCCCceeeec
Q 015225 154 GELIADPNTKELLHYTEKPETFVSDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLD 232 (411)
Q Consensus 154 g~v~~d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (411)
..+..+ +++.+..+.+++.. +..-.-++|+.+.+ +.+.+.... +.+.+
T Consensus 145 ~i~~~~-~~~~v~~~~~r~~l----~~~qtpq~f~~~~L~~a~~~~~~~-------------------------~~~~~- 193 (246)
T 3f1c_A 145 TIVESS-NHEVITDIPVRDHM----YQGQTPQSFNMKKVFNHYQNLTPE-------------------------KKQIL- 193 (246)
T ss_dssp CEEECS-SSSBCCBCCCGGGE----EEEEEEEEEEHHHHHHHHHTSCHH-------------------------HHHHC-
T ss_pred eEEEec-CCCeEEEecChHHh----hhhcCCceeEHHHHHHHHHHHHHc-------------------------CCCcc-
Confidence 233444 45566665555321 11124568887654 444332110 01112
Q ss_pred cchhhcccC-CCceEEEeecceeeecCCccchhhcchHHHhhh
Q 015225 233 QDILSPLAG-KKQLYTYETMDFWEQIKTPGMSLKCSSLYLALF 274 (411)
Q Consensus 233 ~d~l~~l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l~~~ 274 (411)
+|.+..+.. +.++..+..+..|.+|++|+|+..++..+.++.
T Consensus 194 TD~~~~~~~~g~~v~~v~~~~~~~~Itt~~Dl~~ae~~l~~~~ 236 (246)
T 3f1c_A 194 TDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERI 236 (246)
T ss_dssp CCHHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHcCCCEEEEeCCCCccCcCCHHHHHHHHHHHhccc
Confidence 566665544 448999998889999999999999987665444
No 33
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.82 E-value=5.5e-20 Score=165.99 Aligned_cols=219 Identities=14% Similarity=0.070 Sum_probs=136.0
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccch-HHHHHHHhhhcccCCcceE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEE-REFALYVSSISNELKVPVR 82 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~-~~i~~~~~~~~~~~~~~i~ 82 (411)
|.||||||| .|+||++ ..+||+|+|++|+|||+|+++.+.+++++++|+|++++.. +.+++++....-.......
T Consensus 3 ~~~iIlA~G--~g~R~~~--~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (236)
T 2vsh_A 3 IYAGILAGG--TGTRMGI--SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWVSHAEDLVDKYLPLYKERII 78 (236)
T ss_dssp EEEEEEEC---------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGHHHHHHHHHHHCGGGGGGEE
T ss_pred eEEEEeCCc--cccccCC--CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHHHHHHHHHHhccccccCceE
Confidence 789999999 9999987 6789999999999999999999998635999999988765 5566666542100111223
Q ss_pred EeeCCCCCCChHHHHHHHHHhhc--c--CCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIME--E--NPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGEL 156 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~--~--~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v 156 (411)
+.. ...|..++++.+++.+.. . ..+.+++++||.++ ..++..+++.|.+.++ .+++.+. .++.
T Consensus 79 ~~~--~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~--~~~~~~~--~~~~----- 147 (236)
T 2vsh_A 79 ITK--GGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA--VDTVVEA--VDTI----- 147 (236)
T ss_dssp EEE--CCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE--EEEEEEC--CSCE-----
T ss_pred EEC--CCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc--EEEEEec--cccE-----
Confidence 322 235778899999887742 1 23678899999964 5579999999877654 2444454 3322
Q ss_pred EEcCCCC-ceeEEeccCCCcccCccc-ceEEEeCHHHHHH-hhhhhhcccccccccccchhhhhhhcccCCCCceeeecc
Q 015225 157 IADPNTK-ELLHYTEKPETFVSDLIN-CGVYVFTPDFFTA-IQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQ 233 (411)
Q Consensus 157 ~~d~~~~-~v~~~~e~~~~~~~~~~~-~Giyi~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (411)
..+ +++ ++..+.+++. +.. ...|+|+++.+.. +...... +.+.+ .
T Consensus 148 ~~~-~~g~~~~~~~~~~~-----~~~~~~p~~f~~~~l~~~~~~~~~~-------------------------g~~~~-~ 195 (236)
T 2vsh_A 148 VES-TNGQFITDIPNRAH-----LYQGQTPQTFRCKDFMDLYGSLSDE-------------------------EKEIL-T 195 (236)
T ss_dssp EEC-SSSSBCCBCCCGGG-----EEEEEEEEEEEHHHHHHHHHTCCHH-------------------------HHHHC-C
T ss_pred EEe-CCCCeeeeecChHH-----heeecCCcEecHHHHHHHHHHHHhc-------------------------CCCcC-C
Confidence 223 466 7777766532 122 2478899876653 3321110 11112 3
Q ss_pred chhhcccC-CCceEEEeecceeeecCCccchhhcchH
Q 015225 234 DILSPLAG-KKQLYTYETMDFWEQIKTPGMSLKCSSL 269 (411)
Q Consensus 234 d~l~~l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~ 269 (411)
+.++.+.. ..++..+..+++|.+|+||+||..++..
T Consensus 196 ~~~~~l~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~ 232 (236)
T 2vsh_A 196 DACKIFVIKGKDVALAKGEYSNLKITTVTDLKIAKSM 232 (236)
T ss_dssp SHHHHHHHTTCCEEEEECCTTCCCCCSHHHHHHHHHH
T ss_pred CHHHHHHHcCCCEEEEECCccccCcCCHHHHHHHHHH
Confidence 33333333 3478888877899999999999888653
No 34
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.81 E-value=8.1e-20 Score=164.15 Aligned_cols=205 Identities=15% Similarity=0.063 Sum_probs=140.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCC-CcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPN-LAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~g-i~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
++.||||||| .|+||+ ||+|+|++|+|||+|+++.+.++ + +++|+|++++ +.+.+++.. ++.++
T Consensus 4 ~~~aiIlA~G--~g~R~~------~K~l~~i~gkpll~~~l~~~~~~-~~~~~ivvv~~~--~~i~~~~~~----~~~~~ 68 (228)
T 1ezi_A 4 QNIAVILARQ--NSKGLP------LKNLRKMNGISLLGHTINAAISS-KCFDRIIVSTDG--GLIAEEAKN----FGVEV 68 (228)
T ss_dssp EEEEEEECCS--SCSSST------TTTTCEETTEEHHHHHHHHHHHH-CCCSEEEEEESC--HHHHHHHHH----TTCEE
T ss_pred ceEEEEecCC--CCCCCC------CcccceeCCcCHHHHHHHHHHhC-CCCCEEEEECCC--HHHHHHHHH----cCCEE
Confidence 4669999999 999997 79999999999999999999986 6 7999998863 345555543 34444
Q ss_pred EEeeCC----CCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeE
Q 015225 82 RYLKED----KPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGE 155 (411)
Q Consensus 82 ~~v~~~----~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 155 (411)
+..+. ...|+.++++.+++.+. ...+.+++++||.++ ...+..+++.+.+.++++++.+.+. .+. .++.
T Consensus 69 -~~~~~~~~~~~~g~~~sv~~~l~~~~-~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~--~~~-p~~~ 143 (228)
T 1ezi_A 69 -VLRPAELASDTASSISGVIHALETIG-SNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPM--EHH-PLKT 143 (228)
T ss_dssp -EECCC------CHHHHHHHHHHHHHT-CCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEEC--SSC-TTSC
T ss_pred -EeCchHHcCCCCChHHHHHHHHHHhC-CCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEec--CCC-ccee
Confidence 22222 34567889999998883 124789999999975 4568899888876677777777776 331 1233
Q ss_pred EEEcCCCCceeEEec-c---CC--C-cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCce
Q 015225 156 LIADPNTKELLHYTE-K---PE--T-FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDF 228 (411)
Q Consensus 156 v~~d~~~~~v~~~~e-~---~~--~-~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (411)
...| +++++..+.+ + +. . ......++|+|++++..+....+
T Consensus 144 ~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~giy~~~~~~l~~~~~------------------------------- 191 (228)
T 1ezi_A 144 LLQI-NNGEYAPMRHLSDLEQPRQQLPQAFRPNGAIYINDTASLIANNC------------------------------- 191 (228)
T ss_dssp EEEC-C--CEEESSCHHHHTCCGGGSCCEEEEEEEEEEEEHHHHHHHTS-------------------------------
T ss_pred eEEc-CCCcEeeccccccccCCcccCchhheeeeEEEEEeHHHHhhCCc-------------------------------
Confidence 3346 6788888865 2 11 1 11234578999999876533110
Q ss_pred eeeccchhhcccCCCceEEEeec-ceeeecCCccchhhcchHH
Q 015225 229 VRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSSLY 270 (411)
Q Consensus 229 ~~l~~d~l~~l~~~~~v~~~~~~-~~~~~I~t~~d~~~a~~~~ 270 (411)
+ ...++..+... ..|.+|+||+||..+...+
T Consensus 192 ------~-----~g~~v~~~~~~~~~~~dIdtpeDl~~a~~~l 223 (228)
T 1ezi_A 192 ------F-----FIAPTKLYIMSHQDSIDIDTELDLQQAENIL 223 (228)
T ss_dssp ------S-----CCSSCEEEECCTGGGCCCCSHHHHHHHHHHH
T ss_pred ------c-----cCCceEEEEeCcccccCCCCHHHHHHHHHHH
Confidence 0 03355666655 5899999999998886543
No 35
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.80 E-value=2.1e-19 Score=173.11 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=47.2
Q ss_pred CeEEEEcCCcccCC--ChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcCC-CCceeEEeccCCCccc-CcccceE
Q 015225 109 SHIILLNCDVCCSF--PLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADPN-TKELLHYTEKPETFVS-DLINCGV 184 (411)
Q Consensus 109 ~~~lv~~~D~i~~~--~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~~-~~~v~~~~e~~~~~~~-~~~~~Gi 184 (411)
..=|+-.+|+++.. +|.+++++|. +++.. . ++...+|....|.. .++| .|.|||..... .+.++|+
T Consensus 11 ~~~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~--~~~~~~Gv~~ld~a~~g~I-~F~ekPk~~~~~~~~~aGi 80 (374)
T 2iu8_A 11 SSGLVPRGSHMSQSTYSLEQLADFLK-----VEFQG--N--GATLLSGVEEIEEAKTAHI-TFLDNEKYAKHLKSSEAGA 80 (374)
T ss_dssp ----------CCSCCEEHHHHHHHTT-----CEEES--C--TTCEECEECCTTTCCTTEE-EECCSSSTHHHHHTCCCSE
T ss_pred ccCcccCccccccCcCcHHHHHHhhC-----CEEEC--C--CcceEEEEeccccCCCCeE-EEEeCchhhhhhhcCCcEE
Confidence 34477789999976 8999999885 35543 2 56677888777632 3456 99999875332 5678999
Q ss_pred EEeCHHHHH
Q 015225 185 YVFTPDFFT 193 (411)
Q Consensus 185 yi~~~~~~~ 193 (411)
|+|++++++
T Consensus 81 yI~~~~~l~ 89 (374)
T 2iu8_A 81 IIISRTQFQ 89 (374)
T ss_dssp EEEEHHHHH
T ss_pred EEeChhHhh
Confidence 999998764
No 36
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.79 E-value=3.6e-20 Score=166.84 Aligned_cols=221 Identities=11% Similarity=0.111 Sum_probs=141.6
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
+|.+|||||| . +||.+.+...||+|+|++|+|||+|+++.+..+ +. +|+|+++. +.+.++ . .+.
T Consensus 2 ~~~~vIlAaG--~-tRl~~r~~~~~K~l~~i~g~pll~~~l~~l~~~-~~-~ivvv~~~--~~i~~~-------~--~~~ 65 (232)
T 2dpw_A 2 RPSAIVLAGG--K-EAWAERFGVGSKALVPYRGRPMVEWVLEALYAA-GL-SPVYVGEN--PGLVPA-------P--ALT 65 (232)
T ss_dssp CCEEEEECCC--B-CSGGGTTTCSBGGGSEETTEETHHHHHHHHHHT-TC-EEEEESCC--SSCSSC-------C--SEE
T ss_pred ceeEEEECCC--C-CccccccCCCCceeeEECCEEHHHHHHHHHHhc-CC-EEEEEeCh--HHHhhh-------c--CeE
Confidence 4899999999 9 777665556899999999999999999999997 77 88887654 222221 1 234
Q ss_pred EeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccc-cceeEEEEc
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESA-HQFGELIAD 159 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d 159 (411)
+ ....|++++++.+++.+. +++++++||.++ ...+..+++ | +.++++++...+. ++. ..|+.+
T Consensus 66 ~---~~~~g~~~~i~~a~~~~~----~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~~--~~~~~~~~~~--- 131 (232)
T 2dpw_A 66 L---PDRGGLLENLEQALEHVE----GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVPK--EAVEARFPRT--- 131 (232)
T ss_dssp E---CCCSSHHHHHHHHHHTCC----SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEEH--HHHHHHCTTC---
T ss_pred e---cCCCCHHHHHHHHHHHcC----CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEeec--cchhhhCCCc---
Confidence 4 456799999999988773 789999999964 556888888 6 5566777666653 222 234322
Q ss_pred CCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhh--hcccCCCCceeeeccchhh
Q 015225 160 PNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQ--SATRTLPVDFVRLDQDILS 237 (411)
Q Consensus 160 ~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~d~l~ 237 (411)
..++..+.|+| ..++|+|+|+++.+..+.+........ ...+..+...+. +-.+... +.+.+ +++++
T Consensus 132 --~~~v~~~~ek~------~~~~g~~~~~~~~l~~~~~~~~~~~~~-~~~P~~~~~~~~~~~l~~~~~-ge~~l-~~~~~ 200 (232)
T 2dpw_A 132 --KRTYARLREGT------FTGGNLLLLDKSLFRKALPLARRVVAL-RKRPLALARLVGWDVLLKLLL-GRLSL-AEVEA 200 (232)
T ss_dssp --CCCCEEETTEE------EEECSEEEEEHHHHTTTHHHHHHHHHT-TTCHHHHHHHHCHHHHHHHHH-TCCCH-HHHHH
T ss_pred --ceeEEEEecCc------eeeeeEEEEcHHHHHHHHHHHHHHHHh-ccCHHHHHHHHCHHHHHHHHh-ccCCH-HHHHH
Confidence 23567777764 378999999999876665433221000 000000000000 0000000 12223 56665
Q ss_pred cccC--CCceEEEee--cceeeecCCccchh
Q 015225 238 PLAG--KKQLYTYET--MDFWEQIKTPGMSL 264 (411)
Q Consensus 238 ~l~~--~~~v~~~~~--~~~~~~I~t~~d~~ 264 (411)
.+.. +.++..+.. .+.|.+|+||+||.
T Consensus 201 ~~~~~~g~~v~~v~~~~~~~~~dIdtpeDl~ 231 (232)
T 2dpw_A 201 RAQRILGVEARALVTPYPEVGVDVDREEDLV 231 (232)
T ss_dssp HHHHHHSSCEEEEECSCGGGTCCCCSHHHHC
T ss_pred HHHHHhCcEEEEEecCChhhccCCCChhhcc
Confidence 5542 357777776 45799999999974
No 37
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.79 E-value=9e-19 Score=156.62 Aligned_cols=212 Identities=15% Similarity=0.133 Sum_probs=144.3
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCC-CcEEEEecccch-HHHHHHHhhhcccCCcc
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPN-LAQIFLIGFYEE-REFALYVSSISNELKVP 80 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~g-i~~I~Iv~~~~~-~~i~~~~~~~~~~~~~~ 80 (411)
+|.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+..+ + +++|+|++++.. +.+.+++. +..
T Consensus 2 ~~~~vIlA~G--~g~R~~~---~~~K~l~~~~g~pli~~~l~~l~~~-~~~~~i~vv~~~~~~~~~~~~~~------~~~ 69 (223)
T 2xwl_A 2 ATVAVVPAAG--SGERLRA---GRPKAFVTLGGTPLLEHALSGLRAS-GVIDRIVIAVPPALTDESKLVFG------GED 69 (223)
T ss_dssp CEEEEEECCC--CCGGGTS---SSCGGGSEETTEEHHHHHHHHHHHH-SCCSEEEEEECGGGHHHHHHHTC------BTT
T ss_pred ceEEEEECCc--cCcccCC---CCCCeeeEECCeEHHHHHHHHHhcC-CCCCeEEEEEcccHHHHHHHHhc------cCC
Confidence 4899999999 9999983 6799999999999999999999986 6 899999988664 33444432 224
Q ss_pred eEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE
Q 015225 81 VRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA 158 (411)
Q Consensus 81 i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 158 (411)
+.++... .+.+++++.+++.+. ..+.+++++||.++ ..++..+++.+. .+.++++.+.+. .++..+ .
T Consensus 70 v~~~~~~--~~~~~~i~~al~~~~--~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~~~~--~d~~~~----~ 138 (223)
T 2xwl_A 70 SVIVSGG--VDRTESVALALEAAG--DAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPGLAP--ADTIKA----V 138 (223)
T ss_dssp EEEEECC--SSHHHHHHHHHTTCT--TCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEEECC--SSCEEE----E
T ss_pred eEEEcCC--CCHHHHHHHHHHhcC--CCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEEEec--ccceEE----E
Confidence 5555532 456888998888772 25678899999974 446899998883 234556666655 343222 2
Q ss_pred cCCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhc
Q 015225 159 DPNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSP 238 (411)
Q Consensus 159 d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~ 238 (411)
| +++++..+.+++.. ......|+|+++.+..+.+... + +.+ .+....
T Consensus 139 ~-~~g~~~~~~e~~~l----~~~~~p~~f~~~~l~~~~~~~~--------------------------~-~~~-~~~~~~ 185 (223)
T 2xwl_A 139 D-ANGAVLGTPERAGL----RAVQTPQGFHADVLRRAYARAT--------------------------A-GGV-TDDASL 185 (223)
T ss_dssp C-TTSBEEECCCGGGE----EEECSCEEEEHHHHHHHHTTCC--------------------------S-CCC-CCHHHH
T ss_pred c-CCCcEEeecChHHh----eeeeCCcccCHHHHHHHHHHhh--------------------------C-CCC-ccHHHH
Confidence 6 57888888776421 1112457888876654432110 0 001 233333
Q ss_pred ccC-CCceEEEeecceeeecCCccchhhcchHH
Q 015225 239 LAG-KKQLYTYETMDFWEQIKTPGMSLKCSSLY 270 (411)
Q Consensus 239 l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~~ 270 (411)
+.. +.++..+..++.|.+|+||+||..+...+
T Consensus 186 ~~~~~~~v~~~~~~~~~~dIdtpeDl~~a~~~l 218 (223)
T 2xwl_A 186 VEQLGTPVQIVDGDPLAFKITTPLDLVLAEAVL 218 (223)
T ss_dssp HHTTTCCCEEEECCGGGCCCCSHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCcccccccCHHHHHHHHHHH
Confidence 332 34788888788999999999999886544
No 38
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.79 E-value=5.5e-19 Score=158.65 Aligned_cols=219 Identities=15% Similarity=0.208 Sum_probs=137.7
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
|+++.||||||| .|+||+. ..||+|+|++|+|||+|+++.+.+++++++|+|++++..+.+.+++.. .++.+
T Consensus 2 ~~~~~aiIlAaG--~g~R~~~---~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~~~~~---~~~~~ 73 (228)
T 2yc3_A 2 EKSVSVILLAGG--QGKRMKM---SMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFFRDIFEEYEE---SIDVD 73 (228)
T ss_dssp TTCEEEEEECCC--CC----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGGHHHHHTTTT---TSSSE
T ss_pred CcceEEEEECCc--cccccCC---CCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHHHHHHHHHHH---hCCCc
Confidence 357999999999 9999973 579999999999999999999998647999999998766555444432 34445
Q ss_pred eEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE
Q 015225 81 VRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA 158 (411)
Q Consensus 81 i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 158 (411)
+.++.. ..|..++++.+++.+.. ..+.++++.||.++ ...+..+++.|.+.++ ++++.+. .+. ....
T Consensus 74 v~~~~~--~~~~~~sv~~al~~~~~-~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~--~i~~~~~--~~~----~~~~ 142 (228)
T 2yc3_A 74 LSFAIP--GKERQDSVYSGLQEIDV-NSELVCIHDSARPLVNTEDVEKVLKDGSAVGA--AVLGVPA--KAT----IKEV 142 (228)
T ss_dssp EEEECC--CSSHHHHHHHHHTTSCT-TCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE--EEEEEEC--CSC----CCCB
T ss_pred EEEECC--CCCHHHHHHHHHHhhcc-CCCEEEEecCCCccCCHHHHHHHHHHHHhcCc--eEEEEec--cce----EEEE
Confidence 666542 35788999999887742 23678889999864 4568999998876553 4444444 221 1112
Q ss_pred cCCCCceeEEeccCCCcccCcccceEEEeCHHHH-HHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhh
Q 015225 159 DPNTKELLHYTEKPETFVSDLINCGVYVFTPDFF-TAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILS 237 (411)
Q Consensus 159 d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~ 237 (411)
| +++.+..+.+++. ..... ..|+|+++.+ +.+.+.... + +.+ ++.++
T Consensus 143 ~-~~~~v~~~~~~~~---~~~~~-~~~~f~~~~l~~~~~~~~~~-------------------------~-~~~-~~~~~ 190 (228)
T 2yc3_A 143 N-SDSLVVKTLDRKT---LWEMQ-TPQVIKPELLKKGFELVKSE-------------------------G-LEV-TDDVS 190 (228)
T ss_dssp C-TTSCBCCCCSCCC---CEEEE-EEEEECHHHHHHHHHHHHHH-------------------------T-CCC-CSTTH
T ss_pred c-CCCceEEecCccc---eEEEe-CCcEEEHHHHHHHHHHHHhc-------------------------C-CCc-ccHHH
Confidence 4 3445544333211 11222 4899998644 444332110 0 111 44444
Q ss_pred cccC-CCceEEEeecceeeecCCccchhhcchHH
Q 015225 238 PLAG-KKQLYTYETMDFWEQIKTPGMSLKCSSLY 270 (411)
Q Consensus 238 ~l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~~ 270 (411)
.+.+ +.++..+.....|.+|+||+||..++..+
T Consensus 191 ~l~~~g~~v~~~~~~~~~~dIdtpeDl~~a~~~l 224 (228)
T 2yc3_A 191 IVEYLKHPVYVSQGSYTNIKVTTPDDLLLAERIL 224 (228)
T ss_dssp HHHHSSSCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred HHHHcCCceEEEeCCccccCcCCHHHHHHHHHHH
Confidence 4433 34676665556799999999998886543
No 39
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.76 E-value=3.8e-18 Score=153.46 Aligned_cols=214 Identities=14% Similarity=0.158 Sum_probs=129.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceE
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVR 82 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~ 82 (411)
+|.||||||| .|+||++ ..||+|+|++|+|||+|+++.+..++++++|+|+++++.+.+.+ +.... ...+.
T Consensus 6 ~~~aiIlA~G--~g~R~~~---~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~~~~~~-~~~~~---~~~i~ 76 (231)
T 1vgw_A 6 KNIALIPAAG--IGVRFGA---DKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPEDTFADK-VQTAF---PQVRV 76 (231)
T ss_dssp CEEEEEECC---------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTCSTHHH-HHHHC---TTSEE
T ss_pred ceEEEEEccc--ccccCCC---CCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccHHHHHH-HHhcC---CCceE
Confidence 5889999999 9999987 68999999999999999999999863499999998865555555 44321 12355
Q ss_pred EeeCCCCCCChHHHHHHHHHhhcc----CCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEE
Q 015225 83 YLKEDKPHGSAGGLYYFRDMIMEE----NPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGEL 156 (411)
Q Consensus 83 ~v~~~~~~g~~~~l~~~~~~i~~~----~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v 156 (411)
++ ....|++++++.+++.+... ..+.+++++||.++ ...+..+++.+.+.+.. .+++.+. .+...
T Consensus 77 ~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~~~-~~~~~~~--~~~~~---- 147 (231)
T 1vgw_A 77 WK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAAEG-GILAVPV--ADTLK---- 147 (231)
T ss_dssp EC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCTTC-EEEEEEC--CSCEE----
T ss_pred EE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCe-EEEEeec--ccceE----
Confidence 54 34568899999998877421 25789999999975 45588999888655423 3444444 22211
Q ss_pred EEcCCCCceeEEeccCCCcccCc-ccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccch
Q 015225 157 IADPNTKELLHYTEKPETFVSDL-INCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDI 235 (411)
Q Consensus 157 ~~d~~~~~v~~~~e~~~~~~~~~-~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~ 235 (411)
..+ ++++....++ ..+ ...+.|+|+++.+..+.+.... .+.... ..+
T Consensus 148 ~~~--~g~i~~~~~~-----~~~~~~~~p~~f~~~~l~~~~~~~~~------------------------~g~~~~-~~~ 195 (231)
T 1vgw_A 148 RAE--SGQISATVDR-----SGLWQAQTPQLFQAGLLHRALAAENL------------------------GGITDE-ASA 195 (231)
T ss_dssp EES--SSBEEEEECC-----TTEEEEEEEEEEEHHHHHHHHHC----------------------------CCCSH-HHH
T ss_pred EeC--CCceEecCCh-----HHheeeeCCcEecHHHHHHHHHHHhh------------------------cCCCcH-HHH
Confidence 123 4555543322 111 1224889998766543322100 010000 122
Q ss_pred hhcccCCCceEEEeecceeeecCCccchhhcch
Q 015225 236 LSPLAGKKQLYTYETMDFWEQIKTPGMSLKCSS 268 (411)
Q Consensus 236 l~~l~~~~~v~~~~~~~~~~~I~t~~d~~~a~~ 268 (411)
+..+ ..++..+...+.|.+|+||+||..+..
T Consensus 196 ~~~~--~~~v~~v~~~~~~~dIdtpeDl~~a~~ 226 (231)
T 1vgw_A 196 VEKL--GVRPLLIQGDARNLKLTQPQDAYIVRL 226 (231)
T ss_dssp HHTT--TCCCEEEECCTTCCCCCSHHHHHHHHH
T ss_pred HHHc--CCCEEEEECCccccCcCCHHHHHHHHH
Confidence 2221 346777777778999999999988754
No 40
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.76 E-value=4e-17 Score=160.37 Aligned_cols=184 Identities=15% Similarity=0.218 Sum_probs=136.7
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccC-CcchhHhHHHHhccCC---C--CcEEEEecccchHHHHHHHhhhccc
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA-GQPMIQHPISACKRIP---N--LAQIFLIGFYEEREFALYVSSISNE 76 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~~---g--i~~I~Iv~~~~~~~i~~~~~~~~~~ 76 (411)
++.+|||||| .||||+. ..||+|+||. |+||++|+++.+..+. | +.-+++++.+..+.++++++++ ..
T Consensus 92 k~avViLAGG--~GTRmgs---~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t~e~t~~~~~~~-~~ 165 (488)
T 2i5k_A 92 KLAVLKLNGG--LGTSMGC---VGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNTDKDTEHLIKKY-SA 165 (488)
T ss_dssp GEEEEEECCC--BSGGGTC---CSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTTHHHHHHHHGGG-CS
T ss_pred CceEEEEcCC--CcccCCC---CCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCCHHHHHHHHHhc-cc
Confidence 5788999999 9999986 8899999999 9999999999987751 2 3334445547778899999874 45
Q ss_pred CCcceEEeeCC------------------------CCCCChHHHHHH-----HHHhhccCCCeEEEEcCCcccC-CChHH
Q 015225 77 LKVPVRYLKED------------------------KPHGSAGGLYYF-----RDMIMEENPSHIILLNCDVCCS-FPLPD 126 (411)
Q Consensus 77 ~~~~i~~v~~~------------------------~~~g~~~~l~~~-----~~~i~~~~~~~~lv~~~D~i~~-~~l~~ 126 (411)
++.++.++.|. .+.|+++++... ++.+.....++++|+++|.+.. .++.
T Consensus 166 fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~- 244 (488)
T 2i5k_A 166 NRIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK- 244 (488)
T ss_dssp SSCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-
T ss_pred cCceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-
Confidence 67778877665 677999998733 4555323368999999999764 5776
Q ss_pred HHHHHHhcCCeeEEEEEecCcccccc-eeEEEEcCCCCc--eeEEeccCCC--------cccCcccceEEEeCHHHHHHh
Q 015225 127 LLEAHKRYGGMGTMLVIKVSAESAHQ-FGELIADPNTKE--LLHYTEKPET--------FVSDLINCGVYVFTPDFFTAI 195 (411)
Q Consensus 127 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~~d~~~~~--v~~~~e~~~~--------~~~~~~~~Giyi~~~~~~~~l 195 (411)
++.+|.+.++++++.+.+. .++.. ||.+..+ +++ ++++.+.+.. ......|+|+|+|+.+.++.+
T Consensus 245 ~L~~~~~~~a~~t~~v~~~--~~p~~~yG~Iv~~--dG~~~iVE~~e~~~e~~~~~~~~~~~~~~Ntgi~~f~~~~L~~~ 320 (488)
T 2i5k_A 245 ILNHMIETGAEYIMELTDK--TRADVKGGTLISY--DGQVRLLEVAQVPKEHIDEFKNIRKFTNFNTNNLWINLKAVKRL 320 (488)
T ss_dssp HHHHHHHSCCSEEEEEEEC--CGGGSSSCEEEEE--TTEEEEECGGGSCTTSHHHHTCTTTCCEEEEEEEEEEHHHHHHH
T ss_pred HHHHHHhcCCcEEEEEEEe--cCCCCceeEEEEE--CCcEEEEEeccCCHHHHhhcccccccCEEEEEEEEEeHHHHHHH
Confidence 5688888999999888876 56654 9988765 454 4444444432 124577999999999877654
Q ss_pred hh
Q 015225 196 QG 197 (411)
Q Consensus 196 ~~ 197 (411)
.+
T Consensus 321 l~ 322 (488)
T 2i5k_A 321 IE 322 (488)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 41
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.74 E-value=9.9e-18 Score=150.54 Aligned_cols=205 Identities=13% Similarity=0.083 Sum_probs=133.4
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCC-CcEEEEecccchHHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPN-LAQIFLIGFYEEREFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~g-i~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i 81 (411)
++.||||||| .|+||. +|+|+|++|+|||+|+++.+.++ + +++|+|++. .+.+.+++.. ++.++
T Consensus 3 ~~~aiIlA~G--~s~R~~------~K~l~~i~Gkpli~~~i~~~~~~-~~~~~ivv~~~--~~~i~~~~~~----~g~~~ 67 (229)
T 1qwj_A 3 HLAALVLARG--GSKGIP------LKNIKRLAGVPLIGWVLRAALDA-GVFQSVWVSTD--HDEIENVAKQ----FGAQV 67 (229)
T ss_dssp CEEEEEECCS--CCSSSS------CTTTSEETTEEHHHHHHHHHHHH-TCCSEEEEEES--CHHHHHHHHH----TTCEE
T ss_pred cEEEEEEcCC--CCCCCC------CcccceECCEEHHHHHHHHHHhC-CCcCEEEEECC--hHHHHHHHHH----cCCEE
Confidence 5889999999 999994 49999999999999999999996 6 699998884 3456666643 34444
Q ss_pred EEeeC---CCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEE
Q 015225 82 RYLKE---DKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGEL 156 (411)
Q Consensus 82 ~~v~~---~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v 156 (411)
..... ....+..+++..+++.+. ..+.+++++||.++ ..++..+++.+.+.++++++.+.+. .++..++.
T Consensus 68 ~~~~~~~~~~~~~~~~~v~~al~~~~--~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~~~--~~p~~~~v- 142 (229)
T 1qwj_A 68 HRRSSETSKDSSTSLDAIVEFLNYHN--EVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVVRR--HQFRWSEI- 142 (229)
T ss_dssp EECCGGGSSTTCCHHHHHHHHHTTCT--TCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEEEE--CCCEECCC-
T ss_pred EeChhhhcCCCCcHHHHHHHHHHhcC--CCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEeec--cChhHhhc-
Confidence 22111 112233477888877762 25789999999985 4579999999987777655555433 34433332
Q ss_pred EEcCCCCceeE--Eecc------CCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCce
Q 015225 157 IADPNTKELLH--YTEK------PETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDF 228 (411)
Q Consensus 157 ~~d~~~~~v~~--~~e~------~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (411)
.| ....+.. +.+. .+.+.....++|+|+++++.| +..
T Consensus 143 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~giY~~~~~~l--~~~------------------------------- 187 (229)
T 1qwj_A 143 -QK-GVREVTEPLNLNPAKRPRRQDWDGELYENGSFYFAKRHLI--EMG------------------------------- 187 (229)
T ss_dssp -CS-STTCCCCBSSSBTTBCCCTTTSCCEEEEEEEEEEEEHHHH--HTT-------------------------------
T ss_pred -cc-cccccccccccccccccCCCCCCceEEEeeEEEEEEHHHh--ccc-------------------------------
Confidence 22 1001111 1111 112234467999999999887 110
Q ss_pred eeeccchhhcccCCCceEEEeec-ceeeecCCccchhhcchHHHh
Q 015225 229 VRLDQDILSPLAGKKQLYTYETM-DFWEQIKTPGMSLKCSSLYLA 272 (411)
Q Consensus 229 ~~l~~d~l~~l~~~~~v~~~~~~-~~~~~I~t~~d~~~a~~~~l~ 272 (411)
+.....+..+... ++|.+|+||+||..++..+.+
T Consensus 188 ----------~~~g~~~~~~~~~~~~~~dIdt~~Dl~~a~~~~~~ 222 (229)
T 1qwj_A 188 ----------YLQGGKMAYYEMRAEHSVDIDVDIDWPIAEQRVLR 222 (229)
T ss_dssp ----------CSSCSSEEEEECCGGGCCCHHHHCSHHHHHHHHHH
T ss_pred ----------cccCCeEEEEECCcccccCCCCHHHHHHHHHHHHH
Confidence 0112233331433 689999999999999776544
No 42
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.73 E-value=3.3e-17 Score=143.63 Aligned_cols=122 Identities=19% Similarity=0.229 Sum_probs=93.4
Q ss_pred CCc--eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCC
Q 015225 1 MEK--VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELK 78 (411)
Q Consensus 1 m~~--~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~ 78 (411)
|++ +.+|||||| .|+||+ .||+|+|++|+|||+|+++.+..+ ++++|+|++++..+.+.+++.. ++
T Consensus 1 m~~~~~~~iIlA~G--~~~R~g-----~~K~l~~~~g~pli~~~l~~l~~~-~~~~i~vv~~~~~~~~~~~~~~----~~ 68 (199)
T 2waw_A 1 MLRSRVTGVVLAAG--YSRRLG-----TPKQLLPLGDTTLLGATLAMARRC-PFDQLIVTLGGAADEVLEKVEL----DG 68 (199)
T ss_dssp -CCCCEEEEEEESS--CCTTTT-----SCGGGCEETTEEHHHHHHHHHHTS-SCSEEEEEECTTHHHHHHHSCC----TT
T ss_pred CCCCceEEEEECCC--CCCCCC-----CCEEeCEeCccCHHHHHHHHHHhC-CCCcEEEEeCCCHHHHHHHhcc----CC
Confidence 544 789999999 999995 499999999999999999999997 7999999988766666666543 34
Q ss_pred cceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCee
Q 015225 79 VPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMG 138 (411)
Q Consensus 79 ~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~ 138 (411)
.++.. .+....|++++++.+++.+. ...+.+++++||.++ ...+..+++. +.++++
T Consensus 69 ~~~~~-~~~~~~g~~~~i~~al~~~~-~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~ 126 (199)
T 2waw_A 69 LDIVL-VDDAGLGCSSSLKSALTWVD-PTAEGIVLMLGDQPGITASAVASLIAG--GRGATI 126 (199)
T ss_dssp SEEEE-CCCCCTTCCCHHHHHHHTSC-TTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSE
T ss_pred CEEEE-CCCcccCHHHHHHHHHHhhh-ccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCE
Confidence 43332 23445689999999998873 125789999999986 5568888876 344443
No 43
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.71 E-value=5.3e-17 Score=146.47 Aligned_cols=217 Identities=15% Similarity=0.169 Sum_probs=135.0
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCc-
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKV- 79 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~- 79 (411)
|++|.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+..++.+++|+|++++..+.+.+ +.. ++.
T Consensus 5 ~~~~~~iIlA~G--~g~R~~~---~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~~~~~~-~~~----~~~~ 74 (236)
T 1i52_A 5 HLDVCAVVPAAG--FGRRMQT---ECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQ-LPL----ANHP 74 (236)
T ss_dssp CCCEEEEEEECC--CCGGGCC---SSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTCCSGGG-SGG----GGCT
T ss_pred CCceeEEEECCc--CccccCC---CCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccHHHHHH-HHh----cCCC
Confidence 567999999999 9999973 57999999999999999999999863389999998765433433 322 222
Q ss_pred ceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEE
Q 015225 80 PVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELI 157 (411)
Q Consensus 80 ~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~ 157 (411)
.+.++.. ..|..++++.+++.+. ..+.+++++||.++ ...+..+++.+.+.++.+ +++.+. .+.. ..
T Consensus 75 ~v~~~~~--~~g~~~~i~~al~~~~--~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~-~~~~~~--~~~~----~~ 143 (236)
T 1i52_A 75 QITVVDG--GDERADSVLAGLKAAG--DAQWVLVHDAARPCLHQDDLARLLALSETSRTGG-ILAAPV--RDTM----KR 143 (236)
T ss_dssp TEEEEEC--CSSHHHHHHHHHHTST--TCSEEEECCTTCTTCCHHHHHHHHGGGGTCSSCE-EEEEEC--CSCE----EE
T ss_pred CEEEECC--CCCHHHHHHHHHHhcC--CCCEEEEEcCccccCCHHHHHHHHHHHHhcCCeE-EEEEec--cccE----EE
Confidence 4555543 2578899999888773 24789999999975 345788888776554232 333343 2221 11
Q ss_pred EcCCC-CceeEEeccCCCcccCcccc-eEEEeCHHHHH-HhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccc
Q 015225 158 ADPNT-KELLHYTEKPETFVSDLINC-GVYVFTPDFFT-AIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQD 234 (411)
Q Consensus 158 ~d~~~-~~v~~~~e~~~~~~~~~~~~-Giyi~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d 234 (411)
.+ ++ +++....+. ...... +.++|+.+.+. .+...... +.. + ++
T Consensus 144 ~~-~~~~~i~~~~~~-----~~i~~~~~p~~f~~~~l~~~~~~~~~~-------------------------g~~-~-td 190 (236)
T 1i52_A 144 AE-PGKNAIAHTVDR-----NGLWHALTPQFFPRELLHDCLTRALNE-------------------------GAT-I-TD 190 (236)
T ss_dssp EC-TTSSSEEEEECC-----TTCEEEEEEEEEEHHHHHHHHHHHHHT-------------------------TCC-C-CS
T ss_pred Ec-CCCCceeeccCh-----HhheeeeCCceecHHHHHHHHHHHHhc-------------------------CCC-c-cc
Confidence 24 23 455443211 111111 45577775543 33221110 100 1 11
Q ss_pred hhhccc-CCCceEEEeecceeeecCCccchhhcchHHH
Q 015225 235 ILSPLA-GKKQLYTYETMDFWEQIKTPGMSLKCSSLYL 271 (411)
Q Consensus 235 ~l~~l~-~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~l 271 (411)
....+. ...++..+..++.|.+|+||+||..+...+.
T Consensus 191 ~~~~~~~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~~~ 228 (236)
T 1i52_A 191 EASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLT 228 (236)
T ss_dssp HHHHHHHTTCCCEEEECCTTCCCCCSHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCEEEEecCccccccCCHHHHHHHHHHHH
Confidence 111111 1346777777778999999999998876553
No 44
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.71 E-value=3.6e-16 Score=140.78 Aligned_cols=209 Identities=13% Similarity=0.181 Sum_probs=129.8
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCC-CcEEEEecccchHH-HHHHHhhhcccCCcc
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPN-LAQIFLIGFYEERE-FALYVSSISNELKVP 80 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~g-i~~I~Iv~~~~~~~-i~~~~~~~~~~~~~~ 80 (411)
.|.||||||| .|+||+. ..||+|+|++|+|||+|+++.+.++ + +++|+|++++.... +++++. ++..
T Consensus 13 ~~~aiILAaG--~s~Rm~~---~~~K~l~~i~Gkpli~~~i~~l~~~-~~~~~ivVv~~~~~~~~~~~~~~-----~~~~ 81 (234)
T 1vpa_A 13 MNVAILLAAG--KGERMSE---NVPKQFLEIEGRMLFEYPLSTFLKS-EAIDGVVIVTRREWFEVVEKRVF-----HEKV 81 (234)
T ss_dssp CEEEEEEECC--CCGGGCC---SSCGGGCEETTEETTHHHHHHHHHC-TTCSEEEEEECGGGHHHHHTTCC-----CTTE
T ss_pred cCeEEEEcCc--chhhcCC---CCCceEEEECCeEHHHHHHHHHHcC-CCCCeEEEEEChHHHHHHHHHhc-----cCCc
Confidence 4789999999 9999974 5799999999999999999999996 6 89999998866532 233221 2223
Q ss_pred eEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE
Q 015225 81 VRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA 158 (411)
Q Consensus 81 i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 158 (411)
+.+.. ...+..++++.+++.+.....+.+++++||.++ ...+..+++.+.+.+ +.+++.+. .+. ....
T Consensus 82 ~~~~~--gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~--~~i~~~~~--~~~----~~~~ 151 (234)
T 1vpa_A 82 LGIVE--GGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETG--AATLALKN--SDA----LVRV 151 (234)
T ss_dssp EEEEE--CCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHS--EEEEEEEC--CSE----EEEE
T ss_pred eEEeC--CCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcC--CEEEEEec--CCc----EEEE
Confidence 33322 223467788888887742124678888999975 456888988876554 23334443 222 1223
Q ss_pred cCCCCceeEEeccCCCcccCccc-ceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhh
Q 015225 159 DPNTKELLHYTEKPETFVSDLIN-CGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILS 237 (411)
Q Consensus 159 d~~~~~v~~~~e~~~~~~~~~~~-~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~ 237 (411)
+ +++ + .+.++ ..+.. -.-++|+.+.+..+.+. + +.+ .+...
T Consensus 152 ~-~~g-v-~~~~r-----~~~~~~~~p~~f~~~~l~~~~~~----------------------------~-~~~-~~~~~ 193 (234)
T 1vpa_A 152 E-NDR-I-EYIPR-----KGVYRILTPQAFSYEILKKAHEN----------------------------G-GEW-ADDTE 193 (234)
T ss_dssp E-TTE-E-EEECC-----TTEEEEEEEEEEEHHHHHHHHTT----------------------------C-CCC-SSSHH
T ss_pred C-CCC-c-ccCCh-----hHeeeecCCccccHHHHHHHHHh----------------------------c-CCC-CcHHH
Confidence 4 455 5 55443 11110 12237777665443321 0 000 11111
Q ss_pred cccC-CCceEEEeecceeeecCCccchhhcchHH
Q 015225 238 PLAG-KKQLYTYETMDFWEQIKTPGMSLKCSSLY 270 (411)
Q Consensus 238 ~l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~~ 270 (411)
.+.. ..++..+..++.|.+|+||+||..++..+
T Consensus 194 ~~~~~g~~v~~v~~~~~~~dIdtpeDl~~a~~~l 227 (234)
T 1vpa_A 194 PVQKLGVKIALVEGDPLCFKVTFKEDLELARIIA 227 (234)
T ss_dssp HHHTTTCCCEEEECCGGGCCCCSTTHHHHHHHHH
T ss_pred HHHHcCCcEEEEECCchhcCCCCHHHHHHHHHHH
Confidence 1111 34666666667899999999999887644
No 45
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.70 E-value=5.2e-18 Score=166.54 Aligned_cols=263 Identities=11% Similarity=0.024 Sum_probs=166.8
Q ss_pred CCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEc----CCcccCCChHHHHHHHHhc--CC---------eeEEE
Q 015225 77 LKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLN----CDVCCSFPLPDLLEAHKRY--GG---------MGTML 141 (411)
Q Consensus 77 ~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~----~D~i~~~~l~~~l~~~~~~--~~---------~~~~~ 141 (411)
++.+++++.++..+++++.++.+.+.+ ..++|+. +|.+...++.+++..|.+. +. ..++.
T Consensus 111 ~g~~vt~~~~~~pL~~a~~i~~~d~~~-----~~t~V~~~~~kpd~~~~~~l~~l~~~h~~~~~g~~~~~~~ig~~~ti~ 185 (496)
T 3c8v_A 111 KGQHFVCDGKMIPLHDDEVITIKDSFL-----NKTLVHSNSHDPESPEEFTIRNTVAMPYANIHGSLTEGSFIGSFATVD 185 (496)
T ss_dssp TTCEEEETTEEEECSSCCEEEEESCEE-----ESCEEESCCCCTTCTTEEEEESCEECTTCEEESCCEESCEECTTCEEE
T ss_pred cCCEEEEEecccchhHhhhHHhhhhcC-----CceEEeccccCCCCccccchHHHHHHHHHhhcCCcccceEecccceee
Confidence 566788877777788887754433322 1237888 5887766677776666542 21 22333
Q ss_pred EEecCcccc--cceeEEEEcCCCCceeEEeccCCC--cccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhh
Q 015225 142 VIKVSAESA--HQFGELIADPNTKELLHYTEKPET--FVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEAL 217 (411)
Q Consensus 142 ~~~~~~~~~--~~~g~v~~d~~~~~v~~~~e~~~~--~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 217 (411)
+... .++ ..++.+ + .+++....++|.. ..++.....+|.|.++.++.+......
T Consensus 186 L~~l--~d~li~~~~~~--~--~g~i~~~~~~pg~~~i~~~~~lnf~Y~f~~~~L~~~l~~~~~---------------- 243 (496)
T 3c8v_A 186 LSTI--HNSVVRYFSYV--Q--TGELVGKCVEPGQIWIKSGDELEFHYSFDKAILDKYISQEAG---------------- 243 (496)
T ss_dssp SCEE--ESCEECTTCEE--E--SSEEESCEECTTEEEEECTTSEEEEEECCHHHHTTTCBCCTT----------------
T ss_pred HHHH--HHHHHHHHhhh--c--CCceEEeeecCCceecccccccceEEEcCHHHHHHHHhhccC----------------
Confidence 3333 333 344444 2 4566666666643 123445567999988766532211000
Q ss_pred hhcccCCCCceeeeccchhhcccCCCceEEEeecceeeec--CCccchhhcchHHHh-hhhhcCccccccCCCCCCcEEc
Q 015225 218 QSATRTLPVDFVRLDQDILSPLAGKKQLYTYETMDFWEQI--KTPGMSLKCSSLYLA-LFKITSPQLLASGNGITSATIA 294 (411)
Q Consensus 218 ~~~~~~~~~~~~~l~~d~l~~l~~~~~v~~~~~~~~~~~I--~t~~d~~~a~~~~l~-~~~~~~~~~~~~~~~~~~~~~~ 294 (411)
.. .++.|.|+ ..++++++....... ......+.. ...+.+.+.
T Consensus 244 -------------------------~n-----~~g~~~Dll~~~~~d~~~i~~~~~~~~~~~I~~~a----~I~p~a~i~ 289 (496)
T 3c8v_A 244 -------------------------SC-----PTGVLMEFVEVRQEDFEEVFASGHMASGAGSASGA----SVSGYAVIK 289 (496)
T ss_dssp -------------------------SC-----CBSHHHHHHHTTTHHHHHHHHC--------CCTTC----EECTTSEEE
T ss_pred -------------------------cc-----ccceeeehhccchHHHHHHhhccccccCcccCCCc----EECCCcEEe
Confidence 00 01222222 122333222110000 000001111 112356677
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccc
Q 015225 295 GDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLG 374 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~ 374 (411)
+++.||+++.|+++|.| ++++||++|.|+++|+|.+|+||++|.|++++.|.+++||++|.||++|.|.++.. .
T Consensus 290 g~v~IG~~~~I~~~a~I-~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~gv~IGd~v~IG~~a~I~~~~~-----~ 363 (496)
T 3c8v_A 290 GDTVIGENVLVSQRAYL-DNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIINAHLGDMIFTGFNSFLQGSES-----S 363 (496)
T ss_dssp SSCEECTTCEECTTCEE-EEEEECTTCEECTTCEEEEEEEEESCEECTTCEEESEEEEETCEECTTCEEECCSS-----S
T ss_pred CCeEECCCCEECCCcEE-eceEecCCCEECCCceEeceEeCCCCEECCCcEEcCceECCCcEECCCCEEeCCCC-----c
Confidence 88899999999999999 68999999999999999999999999999999999999999999999999988421 2
Q ss_pred eeEECCCCEECCCcEEc---ceEEcCCCEEcCCCC
Q 015225 375 ITILGEAVTVEDEVVVI---NSIVLPNKVLNVSVQ 406 (411)
Q Consensus 375 ~~~i~~~~~i~~~~~v~---~~~i~~~~~v~~~~~ 406 (411)
.++||++|.||++++|. +..|++++.+...+.
T Consensus 364 ~v~IG~~a~IGagsvV~~~~~~~I~~~s~v~G~v~ 398 (496)
T 3c8v_A 364 PLKIGDGCVVMPHTIIDLEEPLEIPAGHLVWGYIR 398 (496)
T ss_dssp CEEECTTCEECTTCEEECSSCEEECSSEEECSEES
T ss_pred ceEECCCCEECCCCEEecCCCcEeCCCCEEEEEec
Confidence 36999999999999987 899999999886544
No 46
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.70 E-value=6.2e-17 Score=141.69 Aligned_cols=115 Identities=17% Similarity=0.255 Sum_probs=87.6
Q ss_pred CCc--eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCC
Q 015225 1 MEK--VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELK 78 (411)
Q Consensus 1 m~~--~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~ 78 (411)
|++ |.+|||||| .|+||. .||+|+|++|+|||+|+++.+..+ ++++|+|++++..+.+.+++.. ++
T Consensus 1 m~~~~~~~iIlA~G--~~~R~g-----~~K~l~~~~g~pll~~~l~~l~~~-~~~~i~vv~~~~~~~~~~~~~~----~~ 68 (197)
T 2wee_A 1 MTATQITGVVLAAG--RSNRLG-----TPKQLLPYRDTTVLGATLDVARQA-GFDQLILTLGGAASAVRAAMAL----DG 68 (197)
T ss_dssp -CCSEEEEEEEECC--CCTTTS-----SCGGGSEETTEEHHHHHHHHHHHT-TCSEEEEEECTTHHHHHHHSCC----TT
T ss_pred CCCCceEEEEECCC--CcccCC-----CCeEcCeeCCccHHHHHHHHHHhc-CCCcEEEEeCCCHHHHHHHhcc----CC
Confidence 544 679999999 999994 599999999999999999999997 7999999988766666666543 33
Q ss_pred cceEEee-CCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHH
Q 015225 79 VPVRYLK-EDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEA 130 (411)
Q Consensus 79 ~~i~~v~-~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~ 130 (411)
. .++. +....|++++++.+++.+. ...+.+++++||.++ ...+..+++.
T Consensus 69 ~--~~~~~~~~~~g~~~~i~~al~~~~-~~~~~vlv~~~D~P~~~~~~i~~l~~~ 120 (197)
T 2wee_A 69 T--DVVVVEDVERGCAASLRVALARVH-PRATGIVLMLGDQPQVAPATLRRIIDV 120 (197)
T ss_dssp S--EEEECC----CCHHHHHHHHTTSC-TTEEEEEEEETTCTTCCHHHHHHHHHH
T ss_pred C--EEEECCCcccCHHHHHHHHHHHhc-ccCCeEEEEeCCcCCCCHHHHHHHHhh
Confidence 3 3333 2344689999999998773 124789999999975 4567888876
No 47
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.70 E-value=4.8e-17 Score=147.04 Aligned_cols=148 Identities=21% Similarity=0.236 Sum_probs=96.4
Q ss_pred CCCceEEEeecce----eeecCCccchhhcchHHHhhhhhcCcccccc-------C---CCCCCcEEcCCcEECCCCEEC
Q 015225 241 GKKQLYTYETMDF----WEQIKTPGMSLKCSSLYLALFKITSPQLLAS-------G---NGITSATIAGDVYIHPSAKVH 306 (411)
Q Consensus 241 ~~~~v~~~~~~~~----~~~I~t~~d~~~a~~~~l~~~~~~~~~~~~~-------~---~~~~~~~~~~~~~i~~~~~v~ 306 (411)
...+++.+...++ |.++++ ++.+++.++..+.......... + ...+++.+.+++.||+++.|+
T Consensus 37 ~~~~~~~~~~~~~~~g~w~di~~---~l~~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~I~~~a~I~~~v~Ig~~~~I~ 113 (240)
T 3r8y_A 37 ETVQAFVNKKSGVLFGEWSEIKT---ILDENSKYIVDYVVENDRRNSAIPMLDLKGIKARIEPGAIIRDHVEIGDNAVIM 113 (240)
T ss_dssp TTSEEEECSSEEEEEEEHHHHHH---HHHHTTTTEEEEEEEECCBSBCSCBCCCTTCSSEECTTCEEBSSCEECTTCEEC
T ss_pred CcceEEEcCCCeEEEccHHHHHH---HHHhccceechhhhhhhhhhhccchhhccCCCCEECCCCEECCCcEECCCCEEC
Confidence 4456666666655 888877 6667766664443221111000 0 012455666667777777777
Q ss_pred CCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEe---------eEECCCCEECCCcEEecCCcCCccccee
Q 015225 307 PTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLN---------SIIGWKSSLGRWARVQGNGDYNAKLGIT 376 (411)
Q Consensus 307 ~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~~~~~~~~~ 376 (411)
++++|.++++||++|.|+.+|.|. +++||++|.|++++.+.+ ++|+++|.||.++.|..+ +
T Consensus 114 ~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~~~---------~ 184 (240)
T 3r8y_A 114 MNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVLEG---------V 184 (240)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEECTT---------C
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEECCC---------c
Confidence 777776677777777777777775 678888888888887765 788888888888887666 7
Q ss_pred EECCCCEECCCcEEcceEEcCCCEE
Q 015225 377 ILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 377 ~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
.||++++|+++++|.+. +.+++++
T Consensus 185 ~Ig~~~~I~~gsvV~~~-vp~~~v~ 208 (240)
T 3r8y_A 185 TVGKGAVVAAGAVVTED-VPPYTVV 208 (240)
T ss_dssp EECTTCEECTTCEECSC-BCTTEEE
T ss_pred EECCCCEECCCCEECCC-cCCCcEE
Confidence 77888888777777443 4444444
No 48
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.68 E-value=7.8e-16 Score=137.77 Aligned_cols=217 Identities=14% Similarity=0.135 Sum_probs=144.0
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccch-HHHHHHHhhhcccCCcce
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEE-REFALYVSSISNELKVPV 81 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~-~~i~~~~~~~~~~~~~~i 81 (411)
++.||||||| .|+||+. ..||+|++++|+|||+|+++.|.+.+.+++|+|++++.. +.+++++.. .+
T Consensus 7 ~~~aIIlAaG--~g~Rmg~---~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~~~~~~~~~~-------~v 74 (231)
T 3q80_A 7 EVVAIVPAAG--SGERLAV---GVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRTDEARQILGH-------RA 74 (231)
T ss_dssp CEEEEEECCC--CCTTTCS---SSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGHHHHHHHHGG-------GC
T ss_pred ceEEEEECCC--CCccCCC---CCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHHHHHHHHhcC-------Ce
Confidence 3689999999 9999975 689999999999999999999998645899999988665 445544432 34
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhcc-CCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE
Q 015225 82 RYLKEDKPHGSAGGLYYFRDMIMEE-NPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA 158 (411)
Q Consensus 82 ~~v~~~~~~g~~~~l~~~~~~i~~~-~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~ 158 (411)
.++.. ..+..++++.+++.+... ..+.++++.||.++ ...+..+++.+.+ +.++.+.+.++ .++..+ .
T Consensus 75 ~~v~g--g~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~-~~~~~i~~~p~--~dt~~~----~ 145 (231)
T 3q80_A 75 MIVAG--GSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD-GYAAVVPVLPL--SDTIKA----V 145 (231)
T ss_dssp EEEEC--CSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT-TCSEEEEEECC--SSCEEE----E
T ss_pred EEEcC--CCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh-cCCeEEEEEec--cCCEEE----E
Confidence 55542 234578999998887521 13688999999986 4568899888765 34566666666 554332 3
Q ss_pred cCCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhc
Q 015225 159 DPNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSP 238 (411)
Q Consensus 159 d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~ 238 (411)
| +++.|....+. ..-....+ -+.|+.+.+....+..... + .+ +.+ +|....
T Consensus 146 ~-~~g~v~~~~~r---~~l~~~qT-Pq~F~~~~L~~a~~~~~~~---n-------------------~~-~~~-TD~~~~ 196 (231)
T 3q80_A 146 D-ANGVVLGTPER---AGLRAVQT-PQGFTTDLLLRSYQRGSLD---L-------------------PA-AEY-TDDASL 196 (231)
T ss_dssp C-TTSBEEECCCG---GGEEEECS-CEEEEHHHHHHHHHHHTC----------------------------CC-SSSHHH
T ss_pred c-CCCcEEEecch---hheEEEcC-CcEEEHHHHHHHHHHHHhh---c-------------------CC-CCC-CcHHHH
Confidence 5 56777766443 11222344 4788887654333221100 0 01 112 555554
Q ss_pred ccC-CCceEEEeecceeeecCCccchhhcchH
Q 015225 239 LAG-KKQLYTYETMDFWEQIKTPGMSLKCSSL 269 (411)
Q Consensus 239 l~~-~~~v~~~~~~~~~~~I~t~~d~~~a~~~ 269 (411)
+.. +.++..+.-...+..|++|+|+..+...
T Consensus 197 ~~~~g~~v~~v~g~~~n~kIt~p~Dl~~ae~~ 228 (231)
T 3q80_A 197 VEHIGGQVQVVDGDPLAFKITTKLDLLLAQAI 228 (231)
T ss_dssp HHHTTCCCEEEECCGGGCCCCSHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCccccCcCCHHHHHHHHHH
Confidence 433 4578877766678889999999887653
No 49
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.66 E-value=5.7e-16 Score=136.07 Aligned_cols=109 Identities=18% Similarity=0.308 Sum_probs=84.6
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
|+++.+|||||| .|+||+ ..||+|+|++|+|||+|+++.+.. ++++|+|++++..+.+ . .++..
T Consensus 4 mm~~~~iILAgG--~s~Rmg----~~~K~ll~i~G~pli~~~l~~l~~--~~~~ivvv~~~~~~~~----~----~~~~~ 67 (201)
T 1e5k_A 4 MTTITGVVLAGG--KARRMG----GVDKGLLELNGKPLWQHVADALMT--QLSHVVVNANRHQEIY----Q----ASGLK 67 (201)
T ss_dssp CCSEEEEEECCC--CCSSSC----SSCGGGSEETTEEHHHHHHHHHHH--HCSCEEEECSSSHHHH----H----TTSCC
T ss_pred CCcceEEEEcCC--CCCcCC----CCCCceeeECceeHHHHHHHHHHh--hCCEEEEEcCCcHHHH----h----hcCCe
Confidence 667999999999 999996 369999999999999999999985 5899999988765332 1 13333
Q ss_pred eEEeeCC-CC-CCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHH
Q 015225 81 VRYLKED-KP-HGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEA 130 (411)
Q Consensus 81 i~~v~~~-~~-~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~ 130 (411)
++... .. .|+.++++.+++.+. .+.+++++||.++ ...+..+++.
T Consensus 68 --~v~~~~~~~~G~~~si~~~l~~~~---~~~vlv~~~D~P~i~~~~i~~l~~~ 116 (201)
T 1e5k_A 68 --VIEDSLADYPGPLAGMLSVMQQEA---GEWFLFCPCDTPYIPPDLAARLNHQ 116 (201)
T ss_dssp --EECCCTTCCCSHHHHHHHHHHHCC---SSEEEEEETTCTTCCTTHHHHHHHT
T ss_pred --EEecCCCCCCCHHHHHHHHHHhCC---CCcEEEEeCCcCcCCHHHHHHHHhh
Confidence 34332 22 689999999998875 5789999999964 4457777765
No 50
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.66 E-value=9.7e-17 Score=141.06 Aligned_cols=178 Identities=15% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
|+++.+|||||| .|+||+ .||+|+|++|+|||+|+++.+..+ +++|+|++++... +++. +
T Consensus 12 ~~~~~~iILA~G--~g~Rmg-----~~K~ll~i~g~pll~~~l~~l~~~--~~~i~vv~~~~~~---~~~~------~-- 71 (201)
T 2e8b_A 12 SKVNTCYVLAGG--KSKRFG-----EDKLLYEIKGKKVIERVYETAKSV--FKEVYIVAKDREK---FSFL------N-- 71 (201)
T ss_dssp CSCCEEEEEEES--SCCCCS-----TTHHHHHHHHHHHHHHHHHHHHTT--CSEEEEEESCSGG---GGGG------T--
T ss_pred ccCceEEEECCC--CCccCC-----CCcccceECceEHHHHHHHHHHHh--CCEEEEEeCcHHH---hhcC------C--
Confidence 445789999999 999996 599999999999999999999984 8999998876543 1111 2
Q ss_pred eEEee-CCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc-C-CChHH-HHHHHHhcCCeeEEEEEecCcccccceeEE
Q 015225 81 VRYLK-EDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC-S-FPLPD-LLEAHKRYGGMGTMLVIKVSAESAHQFGEL 156 (411)
Q Consensus 81 i~~v~-~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~-~-~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v 156 (411)
+.++. +....|++++++.+++.+. .+.+++++||.++ + ..+.. ++ +.++++.
T Consensus 72 ~~~v~~~~~~~g~~~~i~~al~~~~---~~~~lv~~~D~P~i~~~~i~~~l~------~~~~~v~--------------- 127 (201)
T 2e8b_A 72 APVVLDEFEESASIIGLYTALKHAK---EENVFVLSGDLPLMKKETVLYVLE------NFKEPVS--------------- 127 (201)
T ss_dssp CCEEECCCSSCCHHHHHHHHHHHCS---SSEEEEEETTCTTCCHHHHHHHHH------TCCSSEE---------------
T ss_pred ceEEecCCCCCCcHHHHHHHHHHcC---CCCEEEEeCCcCcCCHHHHHHHHh------cCCEEEE---------------
Confidence 34444 3345799999999998874 5889999999985 3 23455 44 1222111
Q ss_pred EEcCCCCceeEEeccCCCcccCcccceEEEeCHHHHHHhhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchh
Q 015225 157 IADPNTKELLHYTEKPETFVSDLINCGVYVFTPDFFTAIQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDIL 236 (411)
Q Consensus 157 ~~d~~~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l 236 (411)
..+ ++ ....+|+| |++++++.+.+.... +.+.+ .+++
T Consensus 128 ~~~---g~-------------~~p~~giy-~~~~~~~~l~~~~~~-------------------------g~~~~-~~~l 164 (201)
T 2e8b_A 128 VAK---TE-------------KLHTLVGV-YSKKLLEKIEERIKK-------------------------GDYRI-WALL 164 (201)
T ss_dssp EEE---SS-------------SEEEEEEE-EEGGGHHHHHHHHHT-------------------------TCCCH-HHHH
T ss_pred ecC---Cc-------------eeeEEEEE-eChhHHHHHHHHHHc-------------------------CCchH-HHHH
Confidence 001 11 13457999 999988877753211 11112 3444
Q ss_pred hcccCCCceEEEee--cceee--ecCCccchhhcchH
Q 015225 237 SPLAGKKQLYTYET--MDFWE--QIKTPGMSLKCSSL 269 (411)
Q Consensus 237 ~~l~~~~~v~~~~~--~~~~~--~I~t~~d~~~a~~~ 269 (411)
+.+ ++..+.. .+.|. ||+||+||.++...
T Consensus 165 ~~~----~~~~~~~~~~~~~~~~dintpedl~~~~~~ 197 (201)
T 2e8b_A 165 KDV----GYNEVEIPEELRYTLLNMNTKEDLKRILAI 197 (201)
T ss_dssp HHH----CCEEEECCGGGGGGGCCSCCC---------
T ss_pred HHC----CeEEeccccccchhhcCCCCHHHHHHHHHH
Confidence 432 3444444 35788 99999999887653
No 51
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.65 E-value=3e-15 Score=147.65 Aligned_cols=188 Identities=14% Similarity=0.217 Sum_probs=142.2
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCccc---CCcchhHhHHHHhcc--------CCC----CcEEEEecccchHHH
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPL---AGQPMIQHPISACKR--------IPN----LAQIFLIGFYEEREF 66 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi---~g~pli~~~l~~l~~--------~~g----i~~I~Iv~~~~~~~i 66 (411)
.+|.+|||||| .||||+. ..||+|+|| .|+|+++++++.+.. . | +..+++.+.+..+.+
T Consensus 101 ~kvavViLAGG--~GTRLg~---~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~-G~~~~ip~vImtS~~t~e~t 174 (505)
T 1jv1_A 101 NKVAVLLLAGG--QGTRLGV---AYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYY-GNKCIIPWYIMTSGRTMEST 174 (505)
T ss_dssp TCEEEEEECCC--CCCTTSC---SSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHH-SSCCCCCEEEEECTTTHHHH
T ss_pred CceEEEEEcCC--ccccCCC---CCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhc-CCCccceEEEEecCCCHHHH
Confidence 46899999999 9999964 789999999 799999999999766 2 4 777777777778889
Q ss_pred HHHHhhhcccCCc---ceEEeeCC---------------------CCCCChHHHHHHHH-----HhhccCCCeEEEEcCC
Q 015225 67 ALYVSSISNELKV---PVRYLKED---------------------KPHGSAGGLYYFRD-----MIMEENPSHIILLNCD 117 (411)
Q Consensus 67 ~~~~~~~~~~~~~---~i~~v~~~---------------------~~~g~~~~l~~~~~-----~i~~~~~~~~lv~~~D 117 (411)
.+++++. +.+|. +|.+..|. .+.|+++.+..+.. .+.....++++|+++|
T Consensus 175 ~~~f~~~-~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~D 253 (505)
T 1jv1_A 175 KEFFTKH-KYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVD 253 (505)
T ss_dssp HHHHHHT-GGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETT
T ss_pred HHHHHhh-hhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECC
Confidence 9999874 44565 46655432 46788988866542 3322235899999999
Q ss_pred cc-cCCChHHHHHHHHhcCCeeEEEEEe-cCcccccceeEEEEcCCCCceeEEeccCCC----------cccCcccceEE
Q 015225 118 VC-CSFPLPDLLEAHKRYGGMGTMLVIK-VSAESAHQFGELIADPNTKELLHYTEKPET----------FVSDLINCGVY 185 (411)
Q Consensus 118 ~i-~~~~l~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~g~v~~d~~~~~v~~~~e~~~~----------~~~~~~~~Giy 185 (411)
.+ ...+...++.+|.++++++++.+++ . .....+|.+..+....++++|.|.|.. ...++.|+|+|
T Consensus 254 n~L~~~~d~~~lg~~~~~~~~~~~~v~~k~--~~~e~~Gvl~~~dg~~~vvEy~E~p~~~~~~~~~~g~~~~~~~N~~~~ 331 (505)
T 1jv1_A 254 NILVKVADPRFIGFCIQKGADCGAKVVEKT--NPTEPVGVVCRVDGVYQVVEYSEISLATAQKRSSDGRLLFNAGNIANH 331 (505)
T ss_dssp BTTCCTTCHHHHHHHHHTTCSEEEEEEECC--STTCSCCEEEEETTEEEEECGGGSCHHHHHCBCTTSSBSSCEEEEEEE
T ss_pred ccccccchHHHHHHHHHcCCCEEEEEEEcc--CCccCcceEEEECCeEEEEEEeeCCHHHhhhcccccccccceeeEEEE
Confidence 97 6677778999999999999988876 4 567789988775122245666666531 12467899999
Q ss_pred EeCHHHHHHhhhh
Q 015225 186 VFTPDFFTAIQGV 198 (411)
Q Consensus 186 i~~~~~~~~l~~~ 198 (411)
+|+.++++.+.+.
T Consensus 332 ~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 332 FFTVPFLRDVVNV 344 (505)
T ss_dssp EEEHHHHHHHHHT
T ss_pred EecHHHHHHHHHh
Confidence 9999998877653
No 52
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.65 E-value=5.8e-16 Score=139.57 Aligned_cols=202 Identities=13% Similarity=0.103 Sum_probs=122.2
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRY 83 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~ 83 (411)
+.||||||| .|+||++ . ||+|+|++|+|||+|+++. .. ++++|+|+++. . +.+ +.. . .+.+
T Consensus 26 ~~aiILAgG--~s~Rm~~---~-~K~l~~i~gkpli~~~l~~--~~-~~~~ivvv~~~-~--~~~-~~~----~--~v~~ 86 (236)
T 2px7_A 26 VSVLIPAAG--NGLRLGR---G-PKAFLQVGGRTLLEWTLAA--FR-DAAEVLVALPP-G--AEP-PKG----L--GAVF 86 (236)
T ss_dssp CEEEEECCC------------C-CGGGCBCSSSBHHHHHHHH--TT-TCSEEEEEECT-T--CCC-CTT----C--SCEE
T ss_pred eEEEEEcCC--CCccCCC---C-CCeEEEECCEEHHHHHHHh--cC-CCCeEEEEeCH-H--HHH-hhc----C--CcEE
Confidence 569999999 9999985 4 9999999999999999999 43 79999998875 1 111 211 1 3455
Q ss_pred eeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEEcCC
Q 015225 84 LKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIADPN 161 (411)
Q Consensus 84 v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~d~~ 161 (411)
+.. ..+..++++.+++.+. .+.+++++||.++ ...+..+++.+.+.+ +.+.+.+. .+...+ .|
T Consensus 87 ~~~--~~~~~~~i~~al~~~~---~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~--~~i~~~~~--~~~~~~----~~-- 151 (236)
T 2px7_A 87 LEG--GATRQASVARLLEAAS---LPLVLVHDVARPFVSRGLVARVLEAAQRSG--AAVPVLPV--PDTLMA----PE-- 151 (236)
T ss_dssp EEC--CSSHHHHHHHHHHHCC---SSEEEECCTTCCCCCHHHHHHHHHHHHHHS--EEEEEEEC--CSEEEE----EC--
T ss_pred EeC--CCchHHHHHHHHHHcC---CCeEEEecCccccCCHHHHHHHHHHHHhcC--CeEEEEec--CCcEEE----ec--
Confidence 542 3467889999888774 5789999999874 455888888876553 33334443 232211 23
Q ss_pred CCceeEEeccCCCcccCcccceEEEeCHHHHHH-hhhhhhcccccccccccchhhhhhhcccCCCCceeeeccchhhccc
Q 015225 162 TKELLHYTEKPETFVSDLINCGVYVFTPDFFTA-IQGVLTHREDRANIRQVSSFEALQSATRTLPVDFVRLDQDILSPLA 240 (411)
Q Consensus 162 ~~~v~~~~e~~~~~~~~~~~~Giyi~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~d~l~~l~ 240 (411)
++++..+.++.. ..... ..++|+++.+.. +...... + +.+ .+....+.
T Consensus 152 ~G~v~~~~~~~~---~~~~~-~~~~f~~~~l~~~~~~~~~~-------------------------g-~~~-~d~~~ll~ 200 (236)
T 2px7_A 152 GEAYGRVVPREA---FRLVQ-TPQGFFTALLREAHAYARRK-------------------------G-LEA-SDDAQLVQ 200 (236)
T ss_dssp SSSCEEEECGGG---CEEEC-SCEEEEHHHHHHHHHHHHHH-------------------------T-CCC-SSHHHHHH
T ss_pred CCeEEecCChHh---hcccc-CCeEEcHHHHHHHHHHHHhc-------------------------C-CCc-hhHHHHHH
Confidence 567766554311 11122 356788875543 3221110 0 001 22211111
Q ss_pred -CCCceEEEeecceeeecCCccchhhcchHH
Q 015225 241 -GKKQLYTYETMDFWEQIKTPGMSLKCSSLY 270 (411)
Q Consensus 241 -~~~~v~~~~~~~~~~~I~t~~d~~~a~~~~ 270 (411)
...++..+..++.|.+|+||+||..+...+
T Consensus 201 ~~~~~v~~v~~~~~~~dIdtpeDl~~a~~~l 231 (236)
T 2px7_A 201 ALGYPVALVEGEATAFKITHPQDLVLAEALA 231 (236)
T ss_dssp HTTCCCEEEECCTTCCCCCSHHHHHHHHHHH
T ss_pred HcCCcEEEEECCccccCCCCHHHHHHHHHHH
Confidence 234677777777899999999998886544
No 53
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.64 E-value=3.6e-15 Score=130.01 Aligned_cols=121 Identities=17% Similarity=0.132 Sum_probs=89.0
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe-eEECCCCEECCCcEEE-eeEECCCCEECCCcEEecC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS-CIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGN 366 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~ 366 (411)
+.+.+.+++.||+++.|++++.|++++.||++|.|++++.|.+ ++||++|.|++++.|. ++.|++++.||+++.+.+.
T Consensus 8 p~a~I~~~~~Ig~~~~I~~~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~ 87 (192)
T 3mqg_A 8 PTAIVDEGARIGAHSRIWHWVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNV 87 (192)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSC
T ss_pred CCcEECCCCEECCCCEECCCCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecc
Confidence 3566677777778888888888888888888888888888874 8888888888888886 7788888888887766542
Q ss_pred CcCC------cccceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 367 GDYN------AKLGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 367 ~~~~------~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
..+. .....++||++++||.++.| .+|+|++|++|++++|+..
T Consensus 88 ~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~ 143 (192)
T 3mqg_A 88 YNPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNKDVPDFA 143 (192)
T ss_dssp SSCBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred cCCccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECcccCCCC
Confidence 2211 11133667777666666655 5899999999999998754
No 54
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.63 E-value=3e-15 Score=131.89 Aligned_cols=66 Identities=15% Similarity=0.051 Sum_probs=37.2
Q ss_pred EECCCCEECCCCEECC--CcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE----eeEECCCCEECCCcEE
Q 015225 298 YIHPSAKVHPTAKIGP--NVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL----NSIIGWKSSLGRWARV 363 (411)
Q Consensus 298 ~i~~~~~v~~~~~i~~--~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~----~s~i~~~~~ig~~~~i 363 (411)
.+|+++.|++++.|.+ ++.||++|.|+++|.|. +++||++|.|+.+|.|. +++||++|.|++++.|
T Consensus 34 ~ig~~~~I~~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I 106 (205)
T 3vbi_A 34 SVGKNVLISKKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIV 106 (205)
T ss_dssp EECSSEEEBTTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEE
T ss_pred EECCCCEECCCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEE
Confidence 4455555555555544 45555555555555555 55666666666666662 2566666666666655
No 55
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.62 E-value=7.3e-15 Score=130.20 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=91.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECC----CcEECCCcEECCCcEEEe---------------eEECCCCEECCCcEEEe-
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGP----NVSISANVRVGAGVRLIS---------------CIVLDDVEIKENAVVLN- 348 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~----~~~ig~~~~i~~~~~i~~---------------~~i~~~~~i~~~~~i~~- 348 (411)
+.+.+.+++.||+++.|+++|.|.+ +++||++|.|+++|.|.. ++||++|.|++++.|.+
T Consensus 50 ~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~v~Ig~~~~I~~~ 129 (213)
T 3kwd_A 50 SFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDNVSITHMALIHGP 129 (213)
T ss_dssp TTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTTCEECTTCEEEEE
T ss_pred CCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCCcEECCCcEEcCC
Confidence 4677778889999999999999963 589999999999999985 89999999999999996
Q ss_pred eEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEcC
Q 015225 349 SIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNV 403 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~ 403 (411)
++||++|.||+++.|.+ ++||++++|+++++|.+++|++++.|+.
T Consensus 130 v~Ig~~v~IG~~a~I~~----------~~Ig~~~~Igags~V~~~~i~~~~~v~~ 174 (213)
T 3kwd_A 130 AYIGDGCFIGFRSTVFN----------ARVGAGCVVMMHVLIQDVEIPPGKYVPS 174 (213)
T ss_dssp EEECTTCEECTTCEEEE----------EEECTTCEECSSCEEESCEECTTBEECT
T ss_pred CEECCCCEECCCCEEeC----------cEECCCCEEcCCCEECCcEeCCCCEECC
Confidence 99999999999999987 9999999999999996665555555554
No 56
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.62 E-value=4.6e-15 Score=127.06 Aligned_cols=105 Identities=21% Similarity=0.271 Sum_probs=88.5
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCC---cEECCCcEECCCcEEE-----eeEECCCCEECCCcEEEeeEECCCCEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPN---VSISANVRVGAGVRLI-----SCIVLDDVEIKENAVVLNSIIGWKSSLGRW 360 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~---~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~ 360 (411)
+.+.+.++++||+++.|+++++|.++ ++||++|.|+++|.|. +++||++|.|++++.|.+++|+++|.||.+
T Consensus 23 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~ 102 (173)
T 1xhd_A 23 DYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMG 102 (173)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEESCEECTTCEECTT
T ss_pred CCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeCCEECCCCEEcCC
Confidence 35566667788888888888888754 7899999999999998 799999999999999999999999999999
Q ss_pred cEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEc
Q 015225 361 ARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLN 402 (411)
Q Consensus 361 ~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~ 402 (411)
+.|.++ +.||++++|+++++| ++..+++++++.
T Consensus 103 ~~i~~~---------~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~ 136 (173)
T 1xhd_A 103 SIILDG---------AEIGEGAFIGAGSLVSQGKKIPPNTLAF 136 (173)
T ss_dssp CEECTT---------CEECTTCEECTTCEECTTCEECTTEEEE
T ss_pred CEEcCC---------CEECCCCEECCCCEECCCcEeCCCCEEE
Confidence 999887 899999999999888 457777777663
No 57
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=4.3e-16 Score=136.35 Aligned_cols=129 Identities=19% Similarity=0.232 Sum_probs=93.1
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRY 83 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~ 83 (411)
|+||||||| .|+||++ .||+|+|++|+|||+|+++.+.++ ++++|+|+++++.+.+.+++.... .+...+.+
T Consensus 1 m~aiIlA~G--~s~R~~~----~~K~l~~~~g~pli~~~l~~l~~~-~~~~v~vv~~~~~~~i~~~~~~~~-~~~~~~~~ 72 (196)
T 3rsb_A 1 MDALIMAGG--KGTRMGG----VEKPLIKLCGRCLIDYVVSPLLKS-KVNNIFIATSPNTPKTKEYINSAY-KDYKNIVV 72 (196)
T ss_dssp CEEEEEC------CGGGG----SCGGGCEETTEEHHHHHHHHHHSS-SCCCEEEECCTTCHHHHHHHHHHT-TTTTEEEE
T ss_pred CEEEEECCC--CCCcCCC----CCccEEEECCEEHHHHHHHHHHHC-CCCEEEEEeCCChHHHHHHHHhhc-cCCCCEEE
Confidence 689999999 9999987 799999999999999999999997 799999999877777888887621 12224454
Q ss_pred eeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHh-----cCCeeEEEEEec
Q 015225 84 LKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKR-----YGGMGTMLVIKV 145 (411)
Q Consensus 84 v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~-----~~~~~~~~~~~~ 145 (411)
+. ....|++++++.+++.+ .+.+++++||.++ ...+..+++.+.+ .+.++.+.+.+.
T Consensus 73 ~~-~~~~g~~~si~~al~~~----~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~p~ 136 (196)
T 3rsb_A 73 ID-TSGKGYIEDLNECIGYF----SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMIPK 136 (196)
T ss_dssp ---------CCCCCTTTTTC----SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEEET
T ss_pred EE-CCCCCcHHHHHHHHHhC----CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEEEc
Confidence 43 34678888888887766 4899999999974 5679999999986 555665566554
No 58
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.61 E-value=4.4e-15 Score=127.13 Aligned_cols=104 Identities=20% Similarity=0.273 Sum_probs=92.7
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCC---cEECCCcEECCCcEEE-----eeEECCCCEECCCcEEEeeEECCCCEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPN---VSISANVRVGAGVRLI-----SCIVLDDVEIKENAVVLNSIIGWKSSLGRW 360 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~---~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~ 360 (411)
+.+.+.+++.||+++.|++++.|.++ +.||++|.|+++|.|. +++||++|.|++++.|.+++|+++|.||.+
T Consensus 21 ~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~~~Ig~~~~Ig~~ 100 (173)
T 1v3w_A 21 ENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHGAKVGNYVIIGIS 100 (173)
T ss_dssp TTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEESCEECSSEEECTT
T ss_pred CCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECCCEECCCCEECCC
Confidence 45667778888999999999999864 8999999999999998 599999999999999999999999999999
Q ss_pred cEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEE
Q 015225 361 ARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVL 401 (411)
Q Consensus 361 ~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v 401 (411)
+.+.++ +.||++++|+++++| +++.|++++++
T Consensus 101 ~~i~~~---------~~Ig~~~~Ig~~s~V~~~~~i~~~~~v 133 (173)
T 1v3w_A 101 SVILDG---------AKIGDHVIIGAGAVVPPNKEIPDYSLV 133 (173)
T ss_dssp CEECTT---------CEECSSEEECTTCEECTTCEECTTEEE
T ss_pred CEEeCC---------CEECCCCEECCCCEECCCcEeCCCcEE
Confidence 999988 999999999999998 46777777777
No 59
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.61 E-value=2.3e-15 Score=131.76 Aligned_cols=114 Identities=14% Similarity=0.156 Sum_probs=84.1
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
|+ |.+|||||| .|+||++ ||+|+|++|+|||+|+++.+... +++|++++..+.+.+++. .+
T Consensus 1 M~-~~~iIlAgG--~g~Rmg~-----~K~l~~i~g~pll~~~l~~l~~~----~ivvv~~~~~~~~~~~~~-----~~-- 61 (197)
T 3d5n_A 1 MN-IGVIILAAG--EGKRFGG-----DKLLAKIDNTPIIMRTIRIYGDL----EKIIIVGKYVNEMLPLLM-----DQ-- 61 (197)
T ss_dssp CC-EEEEEECSC--CTTCCCS-----SGGGSBSSSSBHHHHHHHHTTTS----BCCEEECTTHHHHGGGCT-----TS--
T ss_pred Cc-eEEEEECCc--CcccCCC-----CeeeCEeCceEHHHHHHHHHHhC----CEEEEECCCHHHHHHHhc-----CC--
Confidence 54 899999999 9999964 99999999999999999999873 677777665444443322 23
Q ss_pred eEEeeC-CCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCe
Q 015225 81 VRYLKE-DKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGM 137 (411)
Q Consensus 81 i~~v~~-~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~ 137 (411)
+ ++.. ....|++++++.+++.+.. .+.+++++||.++ ...+..+++.+ +.+++
T Consensus 62 ~-~v~~~~~~~G~~~si~~al~~~~~--~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~ 117 (197)
T 3d5n_A 62 I-VIYNPFWNEGISTSLKLGLRFFKD--YDAVLVALGDMPFVTKEDVNKIINTF-KPNCK 117 (197)
T ss_dssp C-EEECTTGGGCHHHHHHHHHHHTTT--SSEEEEEETTCCCSCHHHHHHHHHTC-CTTCS
T ss_pred E-EEECCCCCCCHHHHHHHHHHhhcc--CCcEEEEeCCccccCHHHHHHHHHHh-cCCCc
Confidence 3 3432 3346899999999998751 3689999999975 34577777765 44444
No 60
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.61 E-value=4.6e-15 Score=128.75 Aligned_cols=106 Identities=21% Similarity=0.271 Sum_probs=90.5
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCc---EECCCcEECCCcEE------------EeeEECCCCEECCCcEEEeeEECC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNV---SISANVRVGAGVRL------------ISCIVLDDVEIKENAVVLNSIIGW 353 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~---~ig~~~~i~~~~~i------------~~~~i~~~~~i~~~~~i~~s~i~~ 353 (411)
+.+.+.+++.||+++.|+++++|.+++ .||++|.|+++|.| .+++||++|.|+++|.|.+++||+
T Consensus 26 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~ 105 (187)
T 3r3r_A 26 TSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGHKVMLHGCTIGN 105 (187)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECTTCEEESCEECS
T ss_pred CCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECCCCEEeCcEECC
Confidence 355666777888888888888887644 99999999999999 679999999999999999999999
Q ss_pred CCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEcC
Q 015225 354 KSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLNV 403 (411)
Q Consensus 354 ~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~~ 403 (411)
+|.||.++.|..+ +.||++++|+++++| .+..+++++++..
T Consensus 106 ~~~Ig~~~~I~~~---------~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G 147 (187)
T 3r3r_A 106 RVLVGMGSIVLDG---------AIIEDDVMIGAGSLVPQHKRLESGYLYLG 147 (187)
T ss_dssp SEEECTTCEECTT---------CEECSSEEECTTCEECTTCEECTTEEEET
T ss_pred CCEECCCCEECCC---------CEECCCCEECCCCEECCCcCcCCCcEEEe
Confidence 9999999999887 999999999999988 4588888877654
No 61
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.60 E-value=1e-14 Score=127.29 Aligned_cols=106 Identities=20% Similarity=0.213 Sum_probs=81.8
Q ss_pred CCcEEcCCcEECCCCEECCCCEEC---CCcEECCCcEECCCcEEE-----------------eeEECCCCEECCCcEEEe
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIG---PNVSISANVRVGAGVRLI-----------------SCIVLDDVEIKENAVVLN 348 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~---~~~~ig~~~~i~~~~~i~-----------------~~~i~~~~~i~~~~~i~~ 348 (411)
+.+.+.+++.||+++.|+++|+|. +++.||++|.|+++|.|. +++||+++.|+.++.+.+
T Consensus 23 ~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~Ig~~~~i~~~~~i~~ 102 (194)
T 3tv0_A 23 VESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMIIGTNNVFEVGCYSQA 102 (194)
T ss_dssp TTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEEECSSCEECTTCEECC
T ss_pred CCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceEECCcceEecceeEee
Confidence 356666677777777777777774 356788888888888884 257888888888888888
Q ss_pred eEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEcC
Q 015225 349 SIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLNV 403 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~~ 403 (411)
+.|++++.|+.++.|..+ +.||++|.|+++++| +++.|+++++|-.
T Consensus 103 ~~Ig~~~~Ig~~~~I~~g---------v~IG~~~~IgagsvV~~~~~Ip~~svv~G 149 (194)
T 3tv0_A 103 MKMGDNNVIESKAYVGRN---------VILTSGCIIGACCNLNTFEVIPENTVIYG 149 (194)
T ss_dssp SEECSSCEECTTCEECTT---------EEECSSCEECTTCEECCCEEECTTEEEES
T ss_pred eeecccceecceeeECCe---------EEECCCCEECCCCEECCCcEECCCCEEEC
Confidence 888888888888888887 888888888888888 5677888877754
No 62
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.60 E-value=1.3e-14 Score=126.57 Aligned_cols=113 Identities=22% Similarity=0.267 Sum_probs=86.7
Q ss_pred EEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE----eeEECCCCEECCCcEEEe-----------------eE
Q 015225 292 TIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI----SCIVLDDVEIKENAVVLN-----------------SI 350 (411)
Q Consensus 292 ~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~-----------------s~ 350 (411)
++.+++.|+++++|+++|.|.+++.||++|.|+++|+|. +.+||++|.|+++|+|.+ ++
T Consensus 8 k~~~~v~I~~~a~I~~~a~I~g~V~IG~~~~I~~~~~I~~~~g~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~~~ 87 (194)
T 3tv0_A 8 KTQKSVKIAPGAVVCVESEIRGDVTIGPRTVIHPKARIIAEAGPIVIGEGNLIEEQALIINAYPDNITPDTEDPEPKPMI 87 (194)
T ss_dssp ----CEEECTTCEECTTSEEESSEEECTTCEECTTCEEEESSSCEEECTTCEECTTCEEEECCCSCC---------CCEE
T ss_pred hcCCCCEECCCCEEcCCCEEeCCCEECCCCEECCCCEEccCCCCeEECCCccccCCcccccccccccccccccCcCCceE
Confidence 456788999999999999999999999999999999996 479999999999999953 57
Q ss_pred ECCCCEECCCcEEecCCcCCccc-ceeEECCCCEECCCcEE-cceEEcCCCEEcCC--CCCcc
Q 015225 351 IGWKSSLGRWARVQGNGDYNAKL-GITILGEAVTVEDEVVV-INSIVLPNKVLNVS--VQEEI 409 (411)
Q Consensus 351 i~~~~~ig~~~~i~~~~~~~~~~-~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~--~~~~~ 409 (411)
||+++.|+.++.+.+. .+ ..+.|+.++.|+.++.| .+|+|++|++|..+ +|+..
T Consensus 88 Ig~~~~i~~~~~i~~~-----~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~s 145 (194)
T 3tv0_A 88 IGTNNVFEVGCYSQAM-----KMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENT 145 (194)
T ss_dssp ECSSCEECTTCEECCS-----EECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTTE
T ss_pred ECCcceEecceeEeee-----eecccceecceeeECCeEEECCCCEECCCCEECCCcEECCCC
Confidence 8888888888776540 00 01445555555555555 68999999999988 77653
No 63
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.60 E-value=6.5e-15 Score=128.20 Aligned_cols=104 Identities=14% Similarity=0.213 Sum_probs=71.1
Q ss_pred CcEEcCCcEECCCCEECCCCEECC---CcEECCCcEECCCcEEE------eeEECCCCEECCCcEEEeeEECCCCEECCC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGP---NVSISANVRVGAGVRLI------SCIVLDDVEIKENAVVLNSIIGWKSSLGRW 360 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~---~~~ig~~~~i~~~~~i~------~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~ 360 (411)
.+.+.+++.||+++.|+++|+|.+ +++||++|.|+++|.|. +++||++|.|++++.+.+++||++|.||.+
T Consensus 45 ~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i~~~~Ig~~~~Ig~~ 124 (191)
T 3ixc_A 45 NARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCILHACTLGNNAFVGMG 124 (191)
T ss_dssp TCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEECSCEECTTCEECTT
T ss_pred CCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEEECCEECCCCEECCC
Confidence 445555566666666666666653 33677777777777776 677777777777777777777777777777
Q ss_pred cEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEc
Q 015225 361 ARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLN 402 (411)
Q Consensus 361 ~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~ 402 (411)
+.|.++ +.||++++|+++++| ++..+++++++.
T Consensus 125 ~~I~~~---------~~Ig~~~~Ig~gsvV~~~~~i~~~~~v~ 158 (191)
T 3ixc_A 125 SIVMDR---------AVMEEGSMLAAGSLLTRGKIVKSGELWA 158 (191)
T ss_dssp CEECTT---------CEECTTCEECTTCEECTTCEECTTEEEE
T ss_pred CEEeCC---------eEECCCCEECCCCEECCCcCcCCCeEEE
Confidence 777776 777777777777766 356666666543
No 64
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.60 E-value=1.3e-14 Score=124.23 Aligned_cols=104 Identities=10% Similarity=0.124 Sum_probs=88.6
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe----eEECCCCEECCCcEEE-----eeEECCCCEECCCcEEec
Q 015225 295 GDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS----CIVLDDVEIKENAVVL-----NSIIGWKSSLGRWARVQG 365 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~----~~i~~~~~i~~~~~i~-----~s~i~~~~~ig~~~~i~~ 365 (411)
+.+.|++++.|++++.|.+++.||++|.|+++|.|.. ++||++|.|+++|.|. +++||+++.|++++.+.+
T Consensus 11 ~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~v~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~Ig~~~~i~~ 90 (173)
T 1xhd_A 11 KKPKIASSAFIADYVTITGDVYVGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLHQSPQYPLILEDDVTVGHQVILHS 90 (173)
T ss_dssp BCCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECCTTCCEEECTTCEECTTCEEES
T ss_pred CCCEECCCcEECCCCEEECCEEECCCcEEcCCcEEecCCCeEEECCCCEECCCCEEEeCCCCCeEECCCCEECCCCEEeC
Confidence 4567899999999999988999999999999999985 8999999999999998 799999999999999876
Q ss_pred CCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEc--CCCCCc
Q 015225 366 NGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLN--VSVQEE 408 (411)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~--~~~~~~ 408 (411)
++||++++|+.++.| .+|+|+++++|. ..+|+.
T Consensus 91 ----------~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~ 132 (173)
T 1xhd_A 91 ----------CHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPPN 132 (173)
T ss_dssp ----------CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ----------CEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCCcEeCCC
Confidence 778888877777766 467777777777 345554
No 65
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.60 E-value=6.4e-15 Score=128.21 Aligned_cols=105 Identities=22% Similarity=0.250 Sum_probs=88.9
Q ss_pred cCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE----eeEECCCCEECCCcEEE------eeEECCCCEECCCcEE
Q 015225 294 AGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI----SCIVLDDVEIKENAVVL------NSIIGWKSSLGRWARV 363 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~------~s~i~~~~~ig~~~~i 363 (411)
.+.+.|++++.|++++.|.+++.||++|.|+++|.|. +++||++|.|+++|.|. +++||++|.||+++.+
T Consensus 31 ~~~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~I~~~~~~i~IG~~~~I~~~~~I~~~~~~g~~~Ig~~~~Ig~~~~i 110 (191)
T 3ixc_A 31 GVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHTDSMHGDTVIGKFVTIGHSCIL 110 (191)
T ss_dssp TBCCEECTTSEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEECC----CCEEECTTCEECTTCEE
T ss_pred CCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEecCCCCeEECCCCEECCCCEEeecCCcCCeEECCCCEECCCCEE
Confidence 4567899999999999999999999999999999997 34999999999999998 8999999999999988
Q ss_pred ecCCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEc--CCCCCc
Q 015225 364 QGNGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLN--VSVQEE 408 (411)
Q Consensus 364 ~~~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~--~~~~~~ 408 (411)
.+ ++||++++|++++.| .+|+|++|++|. ..+|+.
T Consensus 111 ~~----------~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~~~ 154 (191)
T 3ixc_A 111 HA----------CTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSG 154 (191)
T ss_dssp CS----------CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred EC----------CEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCcCcCCC
Confidence 76 778887777777766 467777787777 445543
No 66
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.59 E-value=8.9e-15 Score=137.13 Aligned_cols=145 Identities=13% Similarity=0.099 Sum_probs=107.2
Q ss_pred eeecCCccchhhcchHHHhhhhhcCccccccCCCCCCcEEcC-CcEECCCCEECCCCEECCCcEECCCcEECCCcEEEee
Q 015225 254 WEQIKTPGMSLKCSSLYLALFKITSPQLLASGNGITSATIAG-DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISC 332 (411)
Q Consensus 254 ~~~I~t~~d~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~ 332 (411)
..+|..+.||-...+..+.+|......+... ..+++.+ ++.+++++.|++++.|+++++||++|+||++|+|.+|
T Consensus 26 l~ri~al~~f~~v~~g~lgg~i~~e~nl~~~----~~~~I~~~~a~I~~~a~I~~~~~I~g~~~Ig~~~~Ig~~~~I~~~ 101 (334)
T 2pig_A 26 LRQVIAVTDFNDVKAGTSGGWVDADNVLSQQ----GDCWIYDENAMAFAGTEITGNARITQPCTLYNNVRIGDNVWIDRA 101 (334)
T ss_dssp EEEEEESSCBTTBCTTCEEEEESSTTSBCSS----SSCEECCTTCEEETTCEECTTCEEESSCEEESSCEECTTCEEESC
T ss_pred EEEEEEeeccccccCCccCCeEeccCCcccC----CceEEcCCCeEEcCCcEECCCcEEeeeeeECCCcEECCCCEEEeE
Confidence 5667777888777666666665432333322 3678888 8899999999999999999999999999999999999
Q ss_pred EECCCCEECCCcEEEeeEECCCCEECCCcEEecCCc------------------CCcccceeEECCCCEECCCcEEcceE
Q 015225 333 IVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGD------------------YNAKLGITILGEAVTVEDEVVVINSI 394 (411)
Q Consensus 333 ~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~------------------~~~~~~~~~i~~~~~i~~~~~v~~~~ 394 (411)
+|++++.|+++++|.+++|++++.|+.++++.++.. ++.+++.++|+++|.|+.+++|.+++
T Consensus 102 ~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I~~~a~I~~s~I~~g~~I~~~a~I~~sv 181 (334)
T 2pig_A 102 DISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQIYDRATVNHSRIVHQVQLYGNATITHAF 181 (334)
T ss_dssp EEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEECTTCEEESCEEETTCEECTTCEEESEE
T ss_pred EEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEECCCCEEeccEEcCCCEEcCCeEEeCcE
Confidence 999999999999999998888888888877765422 22334456666667777776665544
Q ss_pred EcCCCEEc
Q 015225 395 VLPNKVLN 402 (411)
Q Consensus 395 i~~~~~v~ 402 (411)
|+++..|.
T Consensus 182 I~~~a~I~ 189 (334)
T 2pig_A 182 IEHRAEVF 189 (334)
T ss_dssp ECTTCEEC
T ss_pred EcCCCEEC
Confidence 44444433
No 67
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.59 E-value=5.6e-15 Score=140.88 Aligned_cols=124 Identities=13% Similarity=0.195 Sum_probs=92.7
Q ss_pred CCceEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcc
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVP 80 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~ 80 (411)
||++.+|||||| .|+||+. ..||+|+|++|+|||+|+++.+.+.+++++|+|+++ ..+.+++++. .
T Consensus 1 Mmki~aIILAaG--~ssRmg~---~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~~~~i~~~~~--------~ 66 (371)
T 1w55_A 1 MSEMSLIMLAAG--NSTRFNT---KVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-NITYMKKFTK--------N 66 (371)
T ss_dssp -CCEEEEEECCS--CCTTTCS---SSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-CHHHHHTTCS--------S
T ss_pred CCccEEEEECCC--CCccCCC---CCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-CHHHHHHHhC--------C
Confidence 788999999999 9999974 579999999999999999999998447999999987 4444433221 1
Q ss_pred eEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeEEEEEec
Q 015225 81 VRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGTMLVIKV 145 (411)
Q Consensus 81 i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~~~~~~~ 145 (411)
+.++. ...|..++++.+++.+. .+.+++++||.++ ...+..+++.+.+. ++++.+.+.
T Consensus 67 v~~v~--~g~g~~~sv~~aL~~l~---~d~vlv~~~D~Pli~~~~i~~li~~~~~~--~a~i~~~~~ 126 (371)
T 1w55_A 67 YEFIE--GGDTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLDKA--DCITPALKV 126 (371)
T ss_dssp SEEEE--CCSSHHHHHHHHHTTCC---SSEEEEEETTCTTCCHHHHHHHHTTGGGC--SEEEEEECC
T ss_pred CEEEe--CCCChHHHHHHHHHhcC---CCeEEEEeCCcccCCHHHHHHHHHHHHhc--CCEEEEEEe
Confidence 44553 23567799999888774 5789999999975 44588888777554 334444443
No 68
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.58 E-value=2.4e-14 Score=129.71 Aligned_cols=104 Identities=20% Similarity=0.282 Sum_probs=87.0
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCc----EECCCcEECCCcEEEe------------------------eEECCCCEE
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNV----SISANVRVGAGVRLIS------------------------CIVLDDVEI 340 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~----~ig~~~~i~~~~~i~~------------------------~~i~~~~~i 340 (411)
+.+.+.+++.||+++.|+++|+|.+.. +||++|.|+++|.|.. ++||++|.|
T Consensus 70 ~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~~~v~IG~~v~I 149 (247)
T 1qre_A 70 PQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKEYAVYIGNNVSL 149 (247)
T ss_dssp TTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEEESEEECTTCEE
T ss_pred CCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCccCceEECCCCEE
Confidence 355666678888888888888887644 9999999999999973 899999999
Q ss_pred CCCcEEEe-eEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 341 KENAVVLN-SIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 341 ~~~~~i~~-s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
+++|.|.+ ++||++|.||.++.|.+ +.||++++|+++++|.++.|+++++|+
T Consensus 150 g~~~~I~~~~~Ig~~v~IG~~a~I~~----------v~Ig~~~~IgagsvV~~~~I~~~~~v~ 202 (247)
T 1qre_A 150 AHQSQVHGPAAVGDDTFIGMQAFVFK----------SKVGNNCVLEPRSAAIGVTIPDGRYIP 202 (247)
T ss_dssp CTTCEEEEEEEECTTCEECTTCEEEE----------EEECTTCEECTTCEEESCEECTTBEEC
T ss_pred CCCCEEcCCcEECCCCEECCCCEEec----------eEECCCCEECCCCEECCeEeCCCCEEC
Confidence 99999997 99999999999999987 899999999999988555555555443
No 69
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.58 E-value=3.1e-14 Score=130.49 Aligned_cols=120 Identities=17% Similarity=0.125 Sum_probs=70.0
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE-------------EeeEECCCCEECCCcEEE--------e
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL-------------ISCIVLDDVEIKENAVVL--------N 348 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i-------------~~~~i~~~~~i~~~~~i~--------~ 348 (411)
.+.+.+++.||+++.|+++++|.+++.||++|.|+++|.| .+++||++|.|+++|+|. +
T Consensus 31 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~g~~~~~~~ 110 (265)
T 4e6u_A 31 YCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNAL 110 (265)
T ss_dssp TCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSE
T ss_pred CeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCCeEECCceEECcccccCCCc
Confidence 3444445555555555555555555666666666666666 356666666666666665 2
Q ss_pred eEECCCCEECCCcEEecCCc--------CCccc-ceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 349 SIIGWKSSLGRWARVQGNGD--------YNAKL-GITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~~~--------~~~~~-~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
++||+++.|+.++.+..+.. +...+ +.+.||++++|+.++.| .+|+|+++++|++++|+..
T Consensus 111 ~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~~svV~~dvp~~~ 187 (265)
T 4e6u_A 111 TKIGSHNLLMVNTHIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGASLILKDVPAYV 187 (265)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECSBBCTTE
T ss_pred eEEccCcEEeeeeEEcccEEECCCcEEcCCcEECCCcEECCCeEEcCCCEECCCcEECCCCEEcCCCEEcccCCCCe
Confidence 45555544444444422110 11111 22777777777777766 5788888888888888754
No 70
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.58 E-value=1.2e-14 Score=126.36 Aligned_cols=106 Identities=26% Similarity=0.302 Sum_probs=89.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECC---CcEECCCcEECCCcEEEee------------EECCCCEECCCcEEEeeEECC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGP---NVSISANVRVGAGVRLISC------------IVLDDVEIKENAVVLNSIIGW 353 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~---~~~ig~~~~i~~~~~i~~~------------~i~~~~~i~~~~~i~~s~i~~ 353 (411)
+.+.+.+++.||+++.|++++.|.+ ++.||++|.|+++|.|..+ +||++|.|+++|.|.+++||+
T Consensus 30 ~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~Ig~ 109 (189)
T 3r1w_A 30 RSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGHQAMLHGCTIGN 109 (189)
T ss_dssp TTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECTTCEEESCEECS
T ss_pred CCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECCCCEEeCcEECC
Confidence 3556666778888888888888873 3589999999999999764 999999999999999999999
Q ss_pred CCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEcC
Q 015225 354 KSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLNV 403 (411)
Q Consensus 354 ~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~~ 403 (411)
+|.||.++.|..+ +.||++++|+++++| ++..+++++++..
T Consensus 110 ~~~Ig~~~~i~~~---------v~Ig~~~~Ig~~s~V~~g~~i~~~~vv~G 151 (189)
T 3r1w_A 110 RVLIGMKSMIMDG---------AIVEDEVIVAAGATVSPGKVLESGFVYMG 151 (189)
T ss_dssp SEEECTTCEECTT---------CEECSSCEECTTCEECTTCEECTTEEEET
T ss_pred CcEECCCCEEcCC---------CEECCCCEEccCCEECCCCEeCCCCEEEC
Confidence 9999999999887 999999999999988 4688888887754
No 71
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.58 E-value=3.4e-14 Score=130.20 Aligned_cols=120 Identities=18% Similarity=0.176 Sum_probs=75.6
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE--------------EeeEECCCCEECCCcEEEe-------
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL--------------ISCIVLDDVEIKENAVVLN------- 348 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i--------------~~~~i~~~~~i~~~~~i~~------- 348 (411)
.+.+.+++.||++++|+++++|.+++.||++|.|++++.| .+++||++|.|+++|+|..
T Consensus 28 ~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~ 107 (266)
T 3r0s_A 28 YAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGKNATIREFATINSGTAKGDG 107 (266)
T ss_dssp TCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECTTCEECTTCEEECCCTTTTS
T ss_pred CCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECCCCEECCceEecCCcccCCc
Confidence 4455555566666666666666666777777777777777 4677777777777777763
Q ss_pred -eEECCCCEECCCcEEecCCc--------CCccc-ceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 349 -SIIGWKSSLGRWARVQGNGD--------YNAKL-GITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 349 -s~i~~~~~ig~~~~i~~~~~--------~~~~~-~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
++||+++.|+.++.+..+.. +...+ +.+.||++++||.++.| .+|+|++++.|++++|+-.
T Consensus 108 ~~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~a~Vg~~s~V~~dvp~~~ 185 (266)
T 3r0s_A 108 FTRIGDNAFIMAYCHIAHDCLLGNNIILANNATLAGHVELGDFTVVGGLTPIHQFVKVGEGCMIAGASALSQDIVPFC 185 (266)
T ss_dssp EEEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCBBCSCBCTTE
T ss_pred cEEECCCceeCCcceEccccccCCCeEECCCceecCCeEECCCcEEccCCEECCCcEECCCCEEccCCeEecccCCCe
Confidence 56666555555555433211 11111 23777777777777766 4677777777888887653
No 72
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.57 E-value=3.3e-14 Score=129.85 Aligned_cols=111 Identities=21% Similarity=0.202 Sum_probs=62.9
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE--------------EeeEECCCCEECCCcEEE--------
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL--------------ISCIVLDDVEIKENAVVL-------- 347 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i--------------~~~~i~~~~~i~~~~~i~-------- 347 (411)
.+.+.+++.||++++|+++|+|.+++.||++|.|+++|.| .+++||++|.|+++|+|.
T Consensus 24 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~ 103 (259)
T 3hsq_A 24 YSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGDHNIFREYSNIHKGTKEDSP 103 (259)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECSSCEECTTCEEECCSBTTBC
T ss_pred CCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECCCcEECCCCEECCCccCCCc
Confidence 3344444444444444444555444555555555555555 234555555555555554
Q ss_pred -----------------eeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEcC
Q 015225 348 -----------------NSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLNV 403 (411)
Q Consensus 348 -----------------~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~ 403 (411)
++.|++++.|+.++.+.++ +.||++++||.++.| .+|+|++++.|++
T Consensus 104 ~~IG~~~~I~~~~~I~~~~~IG~~~~i~~~~~i~~~---------v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~s~V~~ 174 (259)
T 3hsq_A 104 TVIGNKNYFMGNSHVGHDCILGNNNILTHGAVLAGH---------VTLGNFAFISGLVAVHQFCFVGDYSMVAGLAKVVQ 174 (259)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTT---------CEECSSCEECSSEEECTTCEECTTCEECSSEEECS
T ss_pred EEECCCcEEcCCcEECCCcEECCccEEcCCceECCc---------cEECCCcEEeCCCEECCCCEECCCCEECCCCEEcc
Confidence 3444444444444444333 777777777777666 5788888999999
Q ss_pred CCCCcc
Q 015225 404 SVQEEI 409 (411)
Q Consensus 404 ~~~~~~ 409 (411)
++|+..
T Consensus 175 dvp~~~ 180 (259)
T 3hsq_A 175 DVPPYS 180 (259)
T ss_dssp BBCTTE
T ss_pred cCCCCc
Confidence 888754
No 73
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.56 E-value=4.8e-14 Score=130.39 Aligned_cols=120 Identities=16% Similarity=0.202 Sum_probs=66.6
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE-------------EeeEECCCCEECCCcEEEe--------
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL-------------ISCIVLDDVEIKENAVVLN-------- 348 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i-------------~~~~i~~~~~i~~~~~i~~-------- 348 (411)
.+.+.+++.||+++.|+++++|.+++.||++|.|+++|.| .+++||++|.|+++|+|..
T Consensus 46 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~~~Ig~~~~I~~g~~~~~~~ 125 (283)
T 4eqy_A 46 YAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDAGV 125 (283)
T ss_dssp TCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSSCEECTTEEEECCCTTTTSE
T ss_pred CCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCCcccCcceeEccceecCCCc
Confidence 3344444445555555555555555555555555555555 2455666666666666553
Q ss_pred eEECCCCEECCCcEEecCCc--------CCccc-ceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 349 SIIGWKSSLGRWARVQGNGD--------YNAKL-GITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~~~--------~~~~~-~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
++||+++.|+.++.+..+.. +...+ +.+.||++++||.++.| .+|+|++++.|++++|+-.
T Consensus 126 ~~IG~~~~I~~~~~I~~~~~IG~~v~i~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~Ig~~~vvg~~s~V~~dvp~~~ 202 (283)
T 4eqy_A 126 TTLGDDNWIMAYVHIGHDCRVGSHVVLSSNAQMAGHVEIGDWAIVGGMSGVHQYVRIGAHSMLGGASALVQDIPPFV 202 (283)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSBBCTTE
T ss_pred eEECCCcEECceeEEcCCcEECCCcEECCCceEcCCcEECCCeEEecCCEEcCCeEECCCcEECCCCeEecccCCCc
Confidence 45555444444444322100 11111 22777777777777766 4678888888888887653
No 74
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.56 E-value=7.4e-14 Score=121.75 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=55.0
Q ss_pred CcEEcCCcEEC--CCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEe-eEECCCCEECCCcEEec
Q 015225 290 SATIAGDVYIH--PSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLN-SIIGWKSSLGRWARVQG 365 (411)
Q Consensus 290 ~~~~~~~~~i~--~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~-s~i~~~~~ig~~~~i~~ 365 (411)
.+.+.+++.|| +++.|+++++|.+++.||++|.|+++|.|. ++.||++|.|+.++.|.+ ++||+++.||.++.+..
T Consensus 81 ~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~ 160 (194)
T 3bfp_A 81 SALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLP 160 (194)
T ss_dssp TCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred eEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECC
Confidence 34555555666 666666666666666666666666666664 566666666666666653 56666666666655555
Q ss_pred CCcCCcccceeEECCCCEECCCcEE
Q 015225 366 NGDYNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~i~~~~~v 390 (411)
+ +.||++++|+++++|
T Consensus 161 ~---------~~Ig~~~~Igagsvv 176 (194)
T 3bfp_A 161 N---------LSLADDSILGGGATL 176 (194)
T ss_dssp T---------CEECTTCEECTTCEE
T ss_pred C---------CEECCCCEECCCCEE
Confidence 5 555665555555555
No 75
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.56 E-value=2e-14 Score=126.56 Aligned_cols=104 Identities=18% Similarity=0.190 Sum_probs=87.0
Q ss_pred CCcEEcC--CcEECCCCEECCCCEECCCcEECCCcEECCCcEEE----eeEECCCCEECCCcEE----------------
Q 015225 289 TSATIAG--DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI----SCIVLDDVEIKENAVV---------------- 346 (411)
Q Consensus 289 ~~~~~~~--~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i---------------- 346 (411)
..+.+.+ .+.||+++.|+++|+|.+++.||++|.|+++|.|. +++||++|.|+++|+|
T Consensus 43 ~~~~i~~~~~v~IG~~~~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~ 122 (205)
T 3vbi_A 43 KKASIYNPGVISIGNNVRIDDFCILSGKVTIGSYSHIAAYTALYGGEVGIEMYDFANISSRTIVYAAIDDFSGNALMGPT 122 (205)
T ss_dssp TTSEEESGGGEEECSSEEECTTCEEEEEEEECSSEEECTTCEEEEEEEEEEECTTCEECTTCEEESEECCCSSSSCCSTT
T ss_pred CCeEEccCCeeEECCCCEECCCCEEccceEECCCCEECCCeEEEcCCccEEECCCCEECCCcEEEeCCCCcccccccCcc
Confidence 3556655 78899999999999999999999999999999993 5999999999999999
Q ss_pred ----------EeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 347 ----------LNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 347 ----------~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
.+++||++|.||.+|.|..+ +.||++|+|+++++|.+. +.+++++.
T Consensus 123 ~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g---------v~Ig~~~~Ig~gsvV~~~-v~~~~v~~ 178 (205)
T 3vbi_A 123 IPNQYKNVKTGKVILKKHVIIGAHSIIFPN---------VVIGEGVAVGAMSMVKES-LDDWYIYV 178 (205)
T ss_dssp SCGGGCCCEECCEEECTTCEECTTCEECSS---------CEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred cccccceeccCCEEECCCCEECCCCEEcCC---------CEECCCCEEcCCCEECCc-cCCCeEEE
Confidence 35788888888888888887 888888888888888544 45555553
No 76
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.56 E-value=3.6e-14 Score=123.10 Aligned_cols=103 Identities=15% Similarity=0.173 Sum_probs=86.6
Q ss_pred CcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe----eEECCCCEECCCcEE------------EeeEECCCCEECC
Q 015225 296 DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS----CIVLDDVEIKENAVV------------LNSIIGWKSSLGR 359 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~----~~i~~~~~i~~~~~i------------~~s~i~~~~~ig~ 359 (411)
...+|+++.|++++.|.+++.||++|.|+++|.|.. ++||++|.|+++|.| .+++||++|.|++
T Consensus 15 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~ 94 (187)
T 3r3r_A 15 FPGIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSSSNPHGNPLIIGEDVTVGH 94 (187)
T ss_dssp CCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCBTTBC-CBCEEECSSCEECT
T ss_pred CcccCCCeEECCCCEEECceEECCCCEECCCcEEEcCCccEEECCCCEECCCCEEecCCccccCCCCCCeEECCCCEECC
Confidence 457888888888888888899999999999999973 599999999999999 5799999999999
Q ss_pred CcEEecCCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEc--CCCCCc
Q 015225 360 WARVQGNGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLN--VSVQEE 408 (411)
Q Consensus 360 ~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~--~~~~~~ 408 (411)
++.|.+ ++||++++|+++++| .+|+|+++++|. ..+|+.
T Consensus 95 ~~~i~~----------~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~ 142 (187)
T 3r3r_A 95 KVMLHG----------CTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESG 142 (187)
T ss_dssp TCEEES----------CEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTT
T ss_pred CCEEeC----------cEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcCcCCC
Confidence 999877 777777777777766 467788888887 556654
No 77
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.55 E-value=5.4e-14 Score=128.99 Aligned_cols=119 Identities=18% Similarity=0.210 Sum_probs=60.2
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE-------------EeeEECCCCEECCCcEEE--------ee
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL-------------ISCIVLDDVEIKENAVVL--------NS 349 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i-------------~~~~i~~~~~i~~~~~i~--------~s 349 (411)
+.+.+++.||++++|+++|+|.+++.||++|.|+++|.| .+++||++|.|+++|+|. .+
T Consensus 26 ~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~~~I~~~~~I~~~~~~~~~~~ 105 (270)
T 1j2z_A 26 CVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGEDNLIREFCMINPGTEGGIKKT 105 (270)
T ss_dssp CEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSSCEECTTCEECCCCTTTTSEE
T ss_pred CEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCCCEECCCeEEcCCeecCCccE
Confidence 334444444444444444444445555555555555555 234444444444444443 23
Q ss_pred EECCCCEECCCcEEecCCc--------CCccc-ceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 350 IIGWKSSLGRWARVQGNGD--------YNAKL-GITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 350 ~i~~~~~ig~~~~i~~~~~--------~~~~~-~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
+||+++.|+.++.|..+.. +...+ +.+.||++++||.++.| .+|+|++++.|++++|+..
T Consensus 106 ~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~s~V~~dvp~~~ 181 (270)
T 1j2z_A 106 LIGDKNLLMAYVHVAHDCVIGSHCILANGVTLAGHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKSALGKDVPPYC 181 (270)
T ss_dssp EECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECSBBCTTE
T ss_pred EECCCcEECcccccCCCcEECCCcEEcCCccccCccEECCCeEEecCCEECCCcEeCCceEEecCcEecccCCCCe
Confidence 4444433333333321100 00111 22666666666666655 5788888999988888754
No 78
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.54 E-value=7.9e-14 Score=119.30 Aligned_cols=103 Identities=22% Similarity=0.230 Sum_probs=86.5
Q ss_pred CcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe----eEECCCCEECCCcEEE-----eeEECCCCEECCCcEEecC
Q 015225 296 DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS----CIVLDDVEIKENAVVL-----NSIIGWKSSLGRWARVQGN 366 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~----~~i~~~~~i~~~~~i~-----~s~i~~~~~ig~~~~i~~~ 366 (411)
...+++++.|++++.|.+++.||++|.|++++.|.. ++||++|.|+++|.|. +++||+++.|++++.+.+
T Consensus 10 ~~~i~~~~~I~~~a~i~g~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~I~~~~~I~~~~~~~~~Ig~~~~I~~~~~i~~- 88 (173)
T 1v3w_A 10 KPRIHPSAFVDENAVVIGDVVLEEKTSVWPSAVLRGDIEQIYVGKYSNVQDNVSIHTSHGYPTEIGEYVTIGHNAMVHG- 88 (173)
T ss_dssp CCEECTTCEECTTSEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBTTBCEEECSSCEECTTCEEES-
T ss_pred CCEECCCCEECCCCEEeCCEEECCCCEECCCeEEecCCceEEECCCCEECCCcEEEecCCCCeEECCCCEECCCCEECC-
Confidence 456888888888888888999999999999999985 8999999999999998 589999999999999876
Q ss_pred CcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEcC--CCCCc
Q 015225 367 GDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLNV--SVQEE 408 (411)
Q Consensus 367 ~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~--~~~~~ 408 (411)
++||++++|+.++.| .+|+|+++++|.. .+|+.
T Consensus 89 ---------~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~ 130 (173)
T 1v3w_A 89 ---------AKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDY 130 (173)
T ss_dssp ---------CEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTT
T ss_pred ---------CEECCCCEECCCCEEeCCCEECCCCEECCCCEECCCcEeCCC
Confidence 777777777777665 4788888888874 45543
No 79
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.54 E-value=1.2e-13 Score=123.06 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=59.8
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECCCCEECCCcEEecCC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGNG 367 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~~ 367 (411)
.+.+.+.+.+++++.|+++++|.+++.||++|.|+.+|.|. +++||++|.|+.++.+. +++||++|.||.++.|..+
T Consensus 105 ~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~- 183 (220)
T 4ea9_A 105 SAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPG- 183 (220)
T ss_dssp TCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTT-
T ss_pred CCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCC-
Confidence 44556666667777777777776667777777777676665 46666666666666666 3666666666666666655
Q ss_pred cCCcccceeEECCCCEECCCcEEc
Q 015225 368 DYNAKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 368 ~~~~~~~~~~i~~~~~i~~~~~v~ 391 (411)
+.||+++.|+++++|.
T Consensus 184 --------~~Ig~~~~igagsvv~ 199 (220)
T 4ea9_A 184 --------VTIGADTIVGAGGVVV 199 (220)
T ss_dssp --------CEECTTCEECTTCEEC
T ss_pred --------cEECCCCEECCCCEEc
Confidence 5666666666555553
No 80
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.54 E-value=6.3e-14 Score=121.74 Aligned_cols=103 Identities=15% Similarity=0.177 Sum_probs=86.2
Q ss_pred CcEECCCCEECCCCEECCCcEECCCcEECCCcEEE----eeEECCCCEECCCcEEEee------------EECCCCEECC
Q 015225 296 DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI----SCIVLDDVEIKENAVVLNS------------IIGWKSSLGR 359 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~s------------~i~~~~~ig~ 359 (411)
...+++++.|++++.|.+++.||++|.|+++|.|. ++.||++|.|+++|.|..+ +||++|.|++
T Consensus 19 ~~~ig~~~~I~~~~~i~~~v~IG~~~~I~~~~~i~~~~~~i~IG~~~~I~~~~~I~~~~~~~~~~~~~~~~Ig~~~~Ig~ 98 (189)
T 3r1w_A 19 SPKLGERVFVDRSSVIIGDVELGDDCSVWPLAVIRGDMHHIRIGARTSVQDGSVLHITHASDYNPGGYPLIIGDDVTIGH 98 (189)
T ss_dssp CCEECTTCEECTTCEEEEEEEECTTCEECTTCEEEEEEEEEEECTTCEECTTCEEECBCCSSSSTTCBCEEECSSEEECT
T ss_pred CCEECCCcEECCCCEEeeeeEECCCCEECCCCEEecCCCceEECCCCEECCCCEEecCCcccCCCCCCCeEECCCCEECC
Confidence 34688888888888888899999999999999996 3599999999999999865 9999999999
Q ss_pred CcEEecCCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEc--CCCCCc
Q 015225 360 WARVQGNGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLN--VSVQEE 408 (411)
Q Consensus 360 ~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~--~~~~~~ 408 (411)
++.|.+ ++||++|+|++++.| .+|+|+++++|. ..+|+.
T Consensus 99 ~~~i~~----------~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~ 146 (189)
T 3r1w_A 99 QAMLHG----------CTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLESG 146 (189)
T ss_dssp TCEEES----------CEECSSEEECTTCEECTTCEECSSCEECTTCEECTTCEECTT
T ss_pred CCEEeC----------cEECCCcEECCCCEEcCCCEECCCCEEccCCEECCCCEeCCC
Confidence 999877 777777777777766 478888888888 555554
No 81
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.54 E-value=1e-13 Score=120.72 Aligned_cols=103 Identities=20% Similarity=0.228 Sum_probs=71.5
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE----------------EeeEEC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV----------------LNSIIG 352 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i----------------~~s~i~ 352 (411)
.+.+.+++.||+++.|++++.|++++.||++|.|++++.|. +++|+++|.|+.++.+ .+++|+
T Consensus 27 ~~~I~~~~~IG~~~~Ig~~~~I~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig 106 (192)
T 3mqg_A 27 WVHICGGAEIGEGCSLGQNVFVGNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVR 106 (192)
T ss_dssp TCEECTTCEECTTCEECTTCEECSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEEC
T ss_pred CCEECCCcEECCCCEECCCEEECCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEEC
Confidence 34445555555555555566665556666666666666663 5666666666666655 347999
Q ss_pred CCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 353 WKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 353 ~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
++|.||.++.|..+ +.||+++.|+++++|... +.+++++-
T Consensus 107 ~~v~IG~~~~I~~g---------~~Ig~~~~IgagsvV~~~-vp~~~v~~ 146 (192)
T 3mqg_A 107 QGATLGANCTVVCG---------ATIGRYAFVGAGAVVNKD-VPDFALVV 146 (192)
T ss_dssp TTCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred CCcEECCCCEECCC---------CEECCCCEEcCCCEECcc-cCCCCEEE
Confidence 99999999999998 999999999999999543 34555443
No 82
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.53 E-value=7.4e-14 Score=126.05 Aligned_cols=111 Identities=22% Similarity=0.246 Sum_probs=81.8
Q ss_pred EECCCCEECCCCEECCCcEECCCcEECCCcEE-EeeEECCCCEECCCcEEE-eeEECCCCEECCCcEEecCCcCCcccce
Q 015225 298 YIHPSAKVHPTAKIGPNVSISANVRVGAGVRL-ISCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGNGDYNAKLGI 375 (411)
Q Consensus 298 ~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~~~~~~~~~~ 375 (411)
+.++++.|++++.|.+++.||++|+|+++|.| .+++||++|.|+.+|.|. +++||++|.|++++.+.+...++. .+.
T Consensus 87 ~~~~~~~I~~~a~I~~~v~Ig~~~~I~~~s~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~-~~~ 165 (240)
T 3r8y_A 87 LKGIKARIEPGAIIRDHVEIGDNAVIMMNATINIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPS-AKP 165 (240)
T ss_dssp CTTCSSEECTTCEEBSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTT-SCC
T ss_pred ccCCCCEECCCCEECCCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCC-CCC
Confidence 34667777778888778888888888888888 478889999999888887 889999999999988876432221 122
Q ss_pred eEECCCCEECCCcE------E-cceEEcCCCEEcCCCCCcc
Q 015225 376 TILGEAVTVEDEVV------V-INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 376 ~~i~~~~~i~~~~~------v-~~~~i~~~~~v~~~~~~~~ 409 (411)
++||++|+||.+++ | .+|+|++|++|..++|+..
T Consensus 166 ~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~~vp~~~ 206 (240)
T 3r8y_A 166 VIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTEDVPPYT 206 (240)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred cEECCCCEECCCCEECCCcEECCCCEECCCCEECCCcCCCc
Confidence 55555555555554 4 5788888999988888754
No 83
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.53 E-value=1.2e-13 Score=126.45 Aligned_cols=120 Identities=13% Similarity=0.092 Sum_probs=68.9
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-------------eeEECCCCEECCCcEEEe--------
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-------------SCIVLDDVEIKENAVVLN-------- 348 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-------------~~~i~~~~~i~~~~~i~~-------- 348 (411)
.+.+.+++.||+++.|+++|+|.+++.||++|.|+++|+|. +++||++|.|+++|+|..
T Consensus 29 ~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~ 108 (262)
T 2qia_A 29 FCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGTVQGGGL 108 (262)
T ss_dssp TCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSCEECTTCEEECCCTTTTSE
T ss_pred CCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCceeCCCCEEcCCccCCCCc
Confidence 34444445555555555555555556666666666666664 456666666666666652
Q ss_pred eEECCCCEECCCcEEecCCc--------CCccc-ceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 349 SIIGWKSSLGRWARVQGNGD--------YNAKL-GITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~~~--------~~~~~-~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
++||+++.|+.++.+..+.. +...+ +.+.||++++|+.++.| .+|+|++++.|++++|+..
T Consensus 109 ~~IG~~~~Ig~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~~s~V~~~v~~~~ 185 (262)
T 2qia_A 109 TKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCSGVAQDVPPYV 185 (262)
T ss_dssp EEECSSCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSBBCTTE
T ss_pred CEECCCcEEeeeeEECCCCEECCCeEECCcccccCCcEECCCcEEccCCEECCCCEECCCCEEccCCEECCcCCCCe
Confidence 55555555555544432100 00111 22566666666666655 5788999999999888754
No 84
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.53 E-value=6.4e-14 Score=129.94 Aligned_cols=92 Identities=14% Similarity=0.125 Sum_probs=64.5
Q ss_pred cEEcCCcEECCCCEECCCCEE-----CCCcEECCCcEECCCcEEEe-eEECCCCEECCCcEEEe---------eEECCCC
Q 015225 291 ATIAGDVYIHPSAKVHPTAKI-----GPNVSISANVRVGAGVRLIS-CIVLDDVEIKENAVVLN---------SIIGWKS 355 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i-----~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~~---------s~i~~~~ 355 (411)
..+.+++.|++++.|+++++| .+++.||++|.|+.++.|.+ +.||++|.|+.++.+.+ ++||++|
T Consensus 130 ~~I~p~a~I~~~v~Ig~g~~I~~~~I~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v 209 (304)
T 3eg4_A 130 FRAVPNCIVRHSAYIAPNAILMPSFVNLGAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNC 209 (304)
T ss_dssp CEECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTC
T ss_pred cEEcCCEEECCCcEECCCCEEeCCEECCCCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCC
Confidence 344444444444444444444 44566666666666666653 77777777777777766 8999999
Q ss_pred EECCCcEEecCCcCCcccceeEECCCCEECCCcEEc
Q 015225 356 SLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 356 ~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~ 391 (411)
.||.+|.|..+ +.||++|+|+++++|.
T Consensus 210 ~IG~~a~I~~g---------v~IG~~avIgagsvV~ 236 (304)
T 3eg4_A 210 FIGARSEVVEG---------CIVREGSVLGMGVFIG 236 (304)
T ss_dssp EECTTCEECTT---------CEECTTCEECTTCEEC
T ss_pred EECCCCEEcCC---------cEECCCcEECCCCEEc
Confidence 99999998887 8999999999988773
No 85
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.52 E-value=1.8e-13 Score=120.41 Aligned_cols=114 Identities=18% Similarity=0.211 Sum_probs=83.2
Q ss_pred eEEEEEecCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEE
Q 015225 4 VVAVIMVGGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRY 83 (411)
Q Consensus 4 ~~aiIla~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~ 83 (411)
|.+|||||| .|+||+ .||+|++++|+|||+|+++.+... +|+|++++ .+.+..+.. .++..+..
T Consensus 1 m~aiILAgG--~s~Rmg-----~~K~ll~~~G~pli~~~~~~l~~~----~vvvv~~~-~~~~~~~~~----~~~~~~v~ 64 (208)
T 3ngw_A 1 MKVAVLVGG--VGRRIG-----MEKTEVMLCGKKLIEWVLEKYSPF----QTVFVCRD-EKQAEKLSS----RYEAEFIW 64 (208)
T ss_dssp CEEEEECCC--CCTTTT-----SCGGGCEETTEEHHHHHHHHHTTS----EEEEECSS-HHHHHHHHT----TSCSCEEC
T ss_pred CEEEEECCC--chhhCC-----CCCcccEECCeeHHHHHHHHhcCC----CEEEEECC-HHHHHHHHH----hcCCeEEe
Confidence 689999999 999995 599999999999999999999873 78888764 333333222 23433322
Q ss_pred eeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHHHHHhcCCeeE
Q 015225 84 LKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLEAHKRYGGMGT 139 (411)
Q Consensus 84 v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~~~~~~~~~~~ 139 (411)
......|..++++.+++.+ .+.+ +++||+++ ...+..+++.+.+.+.+++
T Consensus 65 -d~~~~~G~~~si~~gl~~~----~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v 116 (208)
T 3ngw_A 65 -DLHKGVGSIAGIHAALRHF----GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDAL 116 (208)
T ss_dssp -CTTCCCSHHHHHHHHHHHH----SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEE
T ss_pred -cCCCCCChHHHHHHHHHHc----CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEE
Confidence 2233457779999998877 3778 99999986 4457888887765555543
No 86
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.52 E-value=7e-14 Score=128.34 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=75.5
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe-eEECCCCEECCCcEEE---------eeEECCCCEECCC
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS-CIVLDDVEIKENAVVL---------NSIIGWKSSLGRW 360 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i~---------~s~i~~~~~ig~~ 360 (411)
+.+.++++|++++.|+++ .|..++.||++|.|+.++.|.+ +.||++|.|+.++.+. .++||++|.||.+
T Consensus 111 a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd~v~IG~~ 189 (276)
T 3gos_A 111 ATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFVGAR 189 (276)
T ss_dssp CEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTTCEECTT
T ss_pred cEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECCCCEECCC
Confidence 334444444444444444 4445677777777777777765 7888888888888875 4889999999999
Q ss_pred cEEecCCcCCcccceeEECCCCEECCCcEEc-ce-------------EEcCCCEEc-CCCC
Q 015225 361 ARVQGNGDYNAKLGITILGEAVTVEDEVVVI-NS-------------IVLPNKVLN-VSVQ 406 (411)
Q Consensus 361 ~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~-~~-------------~i~~~~~v~-~~~~ 406 (411)
|.|..+ +.||++|+|++|++|. ++ .|+++++|. .++|
T Consensus 190 a~I~~g---------v~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svvv~G~~P 241 (276)
T 3gos_A 190 SEVVEG---------VIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSGNLP 241 (276)
T ss_dssp CEECTT---------CEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEE
T ss_pred CEECCC---------CEECCCCEECCCCEECCCcEEccccccceeccccCCCcEEECCCcc
Confidence 999888 8999999999998883 22 677788873 4344
No 87
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.52 E-value=1.6e-13 Score=121.52 Aligned_cols=98 Identities=19% Similarity=0.303 Sum_probs=85.7
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-----eeEECCCCEECCCcEEEe---------------eEECCC
Q 015225 295 GDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-----SCIVLDDVEIKENAVVLN---------------SIIGWK 354 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------------s~i~~~ 354 (411)
....+++++.|+++|.|.+++.||++|.|+++|.|. +++||++|.|+++|.|.. ++||++
T Consensus 38 ~~~~i~~~~~I~~~a~i~~~v~IG~~~~I~~~~~I~~~~~~~v~IG~~~~Ig~~~~I~~~~~~~~ig~~~~~~~~~IG~~ 117 (213)
T 3kwd_A 38 AEPEIAPTAYVHSFSNLIGDVRIKDYVHIAPGTSIRADEGTPFHIGSRTNIQDGVVIHGLQQGRVIGDDGQEYSVWIGDN 117 (213)
T ss_dssp CCCEECTTCEECTTSEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECSSCCEECTTSCEESEEECTT
T ss_pred CCCcCCCCCEECCCCEEeCceEECCCCEEcCCcEEecCCCCceEECCCCEECCCCEEEecCCCceeccCCcccceEECCC
Confidence 345788888889999998899999999999999996 479999999999999985 899999
Q ss_pred CEECCCcEEecCCcCCcccceeEECCCCEECCCcEE------cceEEcCCCEE
Q 015225 355 SSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV------INSIVLPNKVL 401 (411)
Q Consensus 355 ~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v------~~~~i~~~~~v 401 (411)
|.|+.++.|.++ ++||++|+||++++| .+|+|+++++|
T Consensus 118 v~Ig~~~~I~~~---------v~Ig~~v~IG~~a~I~~~~Ig~~~~Igags~V 161 (213)
T 3kwd_A 118 VSITHMALIHGP---------AYIGDGCFIGFRSTVFNARVGAGCVVMMHVLI 161 (213)
T ss_dssp CEECTTCEEEEE---------EEECTTCEECTTCEEEEEEECTTCEECSSCEE
T ss_pred cEECCCcEEcCC---------CEECCCCEECCCCEEeCcEECCCCEEcCCCEE
Confidence 999999999887 999999999999986 45666666666
No 88
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.52 E-value=2.8e-13 Score=124.77 Aligned_cols=78 Identities=23% Similarity=0.268 Sum_probs=59.3
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe---------------eEECCCCEECCCcEEE-eeEEC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS---------------CIVLDDVEIKENAVVL-NSIIG 352 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~---------------~~i~~~~~i~~~~~i~-~s~i~ 352 (411)
+.+.+.+++.|++++.|+++|+|++++.||++|.|+++|.|.+ ++||++|.|+++++|. +++||
T Consensus 13 ~~a~I~~~~~Ig~~~~Ig~~~~I~~~v~Ig~~~~I~~~~~I~~~~~~~~~~~~~~~~~~~Ig~~~~I~~~~~i~~~~~Ig 92 (273)
T 3fs8_A 13 EGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGEYLVDFYNDRINKKHPLIIGENALIRTENVIYGDTIIG 92 (273)
T ss_dssp TTCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEEEECCTTHHHHTCCCCCCEEECTTCEECTTCEEESSCEEC
T ss_pred CCcEECCCCEECCCcEECCCCEECCCCEECCCcEECCCcEeCCccccccccccccccceEECCCCEECCCCEEeCCCEEC
Confidence 3566667777777777777777777788888888888888874 7888888888888886 77777
Q ss_pred CCCEECCCcEEecC
Q 015225 353 WKSSLGRWARVQGN 366 (411)
Q Consensus 353 ~~~~ig~~~~i~~~ 366 (411)
+++.|+.++.|..+
T Consensus 93 ~~~~Ig~~~~I~~~ 106 (273)
T 3fs8_A 93 DNFQTGHKVTIREN 106 (273)
T ss_dssp TTCEECSSCEECSS
T ss_pred CCCEECCceEECCC
Confidence 77777777666544
No 89
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.50 E-value=3.3e-13 Score=123.72 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=71.4
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE-------------EeeEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV-------------LNSIIGWK 354 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i-------------~~s~i~~~ 354 (411)
+.+.+.+++.|++++.|+++|+|++++.||++|+|+++|+|. ++.||++|.|+.+|.| .+++||++
T Consensus 6 p~a~I~~~a~Ig~~~~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~~~Ig~~~~~~~~~g~~~~~~IG~~ 85 (270)
T 1j2z_A 6 KTAIISPKAEINKGVEIGEFCVIGDGVKLDEGVKLHNNVTLQGHTFVGKNTEIFPFAVLGTQPQDLKYKGEYSELIIGED 85 (270)
T ss_dssp TTCEECTTSEECTTCEECTTCEECTTCEECTTCEECTTCEECSEEEECTTCEECTTCEESCCCSCSSCCSCCCEEEECSS
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEeCCeEEcCCCEEEeeeEECcCCccccccCCccceEECCC
Confidence 357788889999999999999999999999999999999998 8999999999999999 57899999
Q ss_pred CEECCCcEEecC
Q 015225 355 SSLGRWARVQGN 366 (411)
Q Consensus 355 ~~ig~~~~i~~~ 366 (411)
+.|++++.|..+
T Consensus 86 ~~I~~~~~I~~~ 97 (270)
T 1j2z_A 86 NLIREFCMINPG 97 (270)
T ss_dssp CEECTTCEECCC
T ss_pred CEECCCeEEcCC
Confidence 999999999764
No 90
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.50 E-value=2.5e-13 Score=129.40 Aligned_cols=33 Identities=12% Similarity=0.148 Sum_probs=22.7
Q ss_pred eEECCCCEECCCcEE-------cceEEcCCCEEcCCC-CCc
Q 015225 376 TILGEAVTVEDEVVV-------INSIVLPNKVLNVSV-QEE 408 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~-~~~ 408 (411)
+.||++|+|+.++.| .+|+|+.++.|++++ |+.
T Consensus 264 v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~V~~~v~~~~ 304 (357)
T 4e79_A 264 TKIGKNCILAGACGVAGHLSIADNVTLTGMSMVTKNISEAG 304 (357)
T ss_dssp CEECTTCEECTTCEECSSCEECSSEEECTTCEECSCBCSCE
T ss_pred cEECCCCEECcCCEECCCeEECCCCEEeecCEEcCccCCCC
Confidence 677777777777766 467777777777777 443
No 91
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.50 E-value=2.5e-13 Score=120.88 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=75.7
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECCCCEECCCcEEecCCc
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGNGD 368 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~~~ 368 (411)
..+.+.+++++++.+++++.|.++++|++++.||++|.|. +++|+++|+||++|.|. ++.|+.++.||++|.|+.+
T Consensus 100 ~~i~~~a~i~~~v~IG~g~~I~~~~~i~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~-- 177 (220)
T 4ea9_A 100 NAIHPSAVVSPSVRLGEGVAVMAGVAINADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVG-- 177 (220)
T ss_dssp CEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTT--
T ss_pred CcCCCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCC--
Confidence 4567778888888888888888888888888888888887 67777777777777766 4666666666665555444
Q ss_pred CCcccceeEECCCCEECCCcEEcceEEcCCCEEcCCCCCcc
Q 015225 369 YNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 369 ~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~~~~~~~ 409 (411)
++|.++++|| .+|+|++|++|.+++|+..
T Consensus 178 -------~~i~~~~~Ig-----~~~~igagsvv~~~v~~~~ 206 (220)
T 4ea9_A 178 -------ARVIPGVTIG-----ADTIVGAGGVVVRDLPDSV 206 (220)
T ss_dssp -------CEECTTCEEC-----TTCEECTTCEECSCBCTTC
T ss_pred -------CEEcCCcEEC-----CCCEECCCCEEccccCCCc
Confidence 4444444444 5688999999999998754
No 92
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.50 E-value=4e-13 Score=122.65 Aligned_cols=78 Identities=22% Similarity=0.312 Sum_probs=66.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE-------------E-eeEECC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV-------------L-NSIIGW 353 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i-------------~-~s~i~~ 353 (411)
+.+.+.+.+.|++++.|+++|.|++++.||++|+|+++|.|. ++.||++|.|+.++.| . +++||+
T Consensus 5 p~a~I~~~a~ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~v~IG~ 84 (259)
T 3hsq_A 5 PTAIIDPKAELHESVEVGPYSIIEGNVSIQEGTIIEGHVKICAGSEIGKFNRFHQGAVIGVMPQDLGFNQQLLTKTVIGD 84 (259)
T ss_dssp TTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEECSSCEECTTCEEEECCSCTTCCTTSCCCEEECS
T ss_pred CCcEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCcEEcCCcEECCCcEECCCCEECCCcccccccCccCCcEEECC
Confidence 356778888888888888888888888999999999999988 4999999999999999 3 688999
Q ss_pred CCEECCCcEEecC
Q 015225 354 KSSLGRWARVQGN 366 (411)
Q Consensus 354 ~~~ig~~~~i~~~ 366 (411)
++.|++++.|..+
T Consensus 85 ~~~Ig~~~~I~~~ 97 (259)
T 3hsq_A 85 HNIFREYSNIHKG 97 (259)
T ss_dssp SCEECTTCEEECC
T ss_pred CcEECCCCEECCC
Confidence 9999999988754
No 93
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.50 E-value=3.2e-13 Score=117.74 Aligned_cols=105 Identities=23% Similarity=0.193 Sum_probs=76.6
Q ss_pred cEEcCCcEECCCCEEC--CCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECCCCEECCCcEEecC
Q 015225 291 ATIAGDVYIHPSAKVH--PTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGN 366 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~--~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~ 366 (411)
..+++++++++++.|+ +++.|.++++|+.+++||++|.|. +++|+++|.||++|.|. +++|..++.||+++.|+.+
T Consensus 76 ~~i~~~a~i~~~~~Ig~~~g~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~ 155 (194)
T 3bfp_A 76 NLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGIN 155 (194)
T ss_dssp CEECTTCEECTTCEECTTSCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred cccCCeEEECCCceeCCCCCcEEcCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCC
Confidence 4567788888888888 888888888888888888888885 67777777777777766 5666666666666555554
Q ss_pred CcCCcccceeEECCCCEECCCcEEcceEEcCCCEEcCCCCCcc
Q 015225 367 GDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 367 ~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~~~~~~~ 409 (411)
++|.++++|+ .+|+|++|++|.+++|+..
T Consensus 156 ---------~~i~~~~~Ig-----~~~~Igagsvv~~~v~~~~ 184 (194)
T 3bfp_A 156 ---------SCVLPNLSLA-----DDSILGGGATLVKNQDEKG 184 (194)
T ss_dssp ---------CEECTTCEEC-----TTCEECTTCEECSCBCSCC
T ss_pred ---------CEECCCCEEC-----CCCEECCCCEEccccCCCC
Confidence 4444444444 5688899999999988654
No 94
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.49 E-value=1.7e-13 Score=127.45 Aligned_cols=108 Identities=10% Similarity=0.073 Sum_probs=71.5
Q ss_pred CcEEcCCcEECCCCEECCCCEECC-----CcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEe---------eEECCC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGP-----NVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLN---------SIIGWK 354 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~-----~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~---------s~i~~~ 354 (411)
+..+.++++|++++.|+++|+|++ ++.||++|.|+.+++|. ++.||++|.|+.++.|.+ ++||++
T Consensus 145 ~~~I~p~a~I~~~~~IG~g~~I~~~~I~~g~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~I~~~~~~~~~~~v~IGd~ 224 (316)
T 3tk8_A 145 GFRVVPPAIARRGSFIAKNVVLMPSYTNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPVIIEDN 224 (316)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSEEECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECTT
T ss_pred CcEEeCCeEEeCCcEEcCCCEECCCEEeCCCEECCCCEEccceEECCCCEECCCCEEcCCCEECCCcccccCCCcEECCC
Confidence 455666666666666666666654 44455555555545553 355666666666666654 688888
Q ss_pred CEECCCcEEecCCcCCcccceeEECCCCEECCCcEEc-ce-------------EEcCCCEEc-CCCC
Q 015225 355 SSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVI-NS-------------IVLPNKVLN-VSVQ 406 (411)
Q Consensus 355 ~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~-~~-------------~i~~~~~v~-~~~~ 406 (411)
|.||.+|.|..+ +.||++|+|++|++|. ++ .|+++++|. .++|
T Consensus 225 v~IG~~a~I~~g---------v~IG~g~vIgagsvV~~~t~I~d~~~~~v~~g~Vp~gsvVvaGsvP 282 (316)
T 3tk8_A 225 CFIGARSEVVEG---------VIVEENSVISMGVYLGQSTKIYDRETGEVTYGRIPAGSVVVAGNLP 282 (316)
T ss_dssp CEECTTCEECTT---------CEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEE
T ss_pred CEECCCCEEcCC---------CEECCCCEEcCCCEEcCCeeecccccccccccEeCCCCEEECCCCc
Confidence 888888888877 8888888888888883 33 677788874 4344
No 95
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.49 E-value=3.9e-13 Score=125.58 Aligned_cols=36 Identities=11% Similarity=0.155 Sum_probs=27.7
Q ss_pred eeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCccc
Q 015225 375 ITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEII 410 (411)
Q Consensus 375 ~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~~ 410 (411)
.+.||++++||.++.| .+|+|++++.|++++|+..+
T Consensus 168 ~v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V~~dvp~~~~ 210 (305)
T 3t57_A 168 HVVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVVSQDVPKYMM 210 (305)
T ss_dssp TCEECSSCEECTTCEECTTCEECTTCEECTTCEECSBBCTTEE
T ss_pred CCEECCceEEcCCCEEcCCeEECCCCEEcCCCeEcccCCCCeE
Confidence 3677777777777665 57899999999999987543
No 96
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.49 E-value=4.1e-13 Score=123.61 Aligned_cols=120 Identities=21% Similarity=0.157 Sum_probs=82.2
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECCCCEECCCcEEecCC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGNG 367 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~~ 367 (411)
.+.+.+++.||+++.|++++.|++++.||+++.|+.++.|. +++||++|.|++++.|. ++.|++++.++.++.+.+..
T Consensus 82 ~~~i~~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~~~i~~~~~IG~~~~I~~~~~I~~~~~ig~~~~i~~~~~i~~~~ 161 (273)
T 3fs8_A 82 ENVIYGDTIIGDNFQTGHKVTIRENTKIGNNVKIGTLSDIQHHVYIGNYVNIHSNVFVGEKSIIKDFVWLFPHVVLTNDP 161 (273)
T ss_dssp TCEEESSCEECTTCEECSSCEECSSCEECSSCEECTTCEECSSCEECSSCEECTTCEECTTCEECTTCEECTTCEECCCS
T ss_pred CCEEeCCCEECCCCEECCceEECCCCEECCCCEECccceeCCceEECCceEECCCCEECCCceeCCceeecCceEecCCC
Confidence 44455556666666666666666667777777777777665 67777777777777777 67777777777777766643
Q ss_pred cCCc-ccceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 368 DYNA-KLGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 368 ~~~~-~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
.++. ....+.||++++||.++.| .+|+|++|++|++++|+..
T Consensus 162 ~~~~~~~~~v~Ig~~~~IG~~~~I~~g~~IG~~~~IgagsvV~~dvp~~~ 211 (273)
T 3fs8_A 162 TPPSNELLGVTIELFAVIAARSVVLPGIHINEDALVGAGAVVTKDVPKET 211 (273)
T ss_dssp SSSCSCCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred CCcccccCCcEECCCeEEcCCCEEcCCCEECCCCEECCCCEECccCCCCc
Confidence 3221 1223677777777766655 5899999999999998764
No 97
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.49 E-value=6.4e-13 Score=126.00 Aligned_cols=32 Identities=9% Similarity=0.055 Sum_probs=26.1
Q ss_pred eeEECCCCEECCCcEE-------cceEEcCCCEEcCCCC
Q 015225 375 ITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQ 406 (411)
Q Consensus 375 ~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~ 406 (411)
.+.||++|+|+.++.| .+++|+.++.|++++|
T Consensus 258 ~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~V~~~v~ 296 (341)
T 3eh0_A 258 SLKIGRYCMIGGASVINGHMEICDKVTVTGMGMVMRPIT 296 (341)
T ss_dssp TEEECTTCEECTTCEECSSEEECSSEEECTTCEECSCBC
T ss_pred CcEECCCcEEcCCCEECCCCEECCCCEEeeCCEECCCcC
Confidence 4788888888888877 5788888888888887
No 98
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.48 E-value=7.6e-13 Score=121.17 Aligned_cols=78 Identities=19% Similarity=0.323 Sum_probs=71.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE--------------EeeEECC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV--------------LNSIIGW 353 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i--------------~~s~i~~ 353 (411)
+.+.+.+++.||+++.|+++|+|++++.||++|+|++++.|. ++.||++|.|+.++.| .+++||+
T Consensus 9 p~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I~~~~~~~~~~g~~~~~v~IG~ 88 (266)
T 3r0s_A 9 PSAVIEEGAQLGDDVVIEAYAYVSKDAKIGNNVVIKQGARILSDTTIGDHSRVFSYAIVGDIPQDISYKEEQKSGVVIGK 88 (266)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEEEECCSCSCCC----CEEEECT
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCeEEeCCcEECCCcEEccCceeccCCccccccCCcCceEEECC
Confidence 467788888999999999999999999999999999999998 7999999999999999 5899999
Q ss_pred CCEECCCcEEecC
Q 015225 354 KSSLGRWARVQGN 366 (411)
Q Consensus 354 ~~~ig~~~~i~~~ 366 (411)
++.|++++.|..+
T Consensus 89 ~~~Ig~~~~I~~~ 101 (266)
T 3r0s_A 89 NATIREFATINSG 101 (266)
T ss_dssp TCEECTTCEEECC
T ss_pred CCEECCceEecCC
Confidence 9999999999864
No 99
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.48 E-value=5.6e-13 Score=127.05 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=31.0
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECCCCEECCCcEE
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARV 363 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i 363 (411)
+.+.+++.|++++.|+++++|++++.||++|+|+++|.|. ++.||++|.|+.+++|. +++||++|.|++++.|
T Consensus 109 a~I~~~a~ig~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I 183 (357)
T 4e79_A 109 ARIHPSAVISETAYIGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSYVTITGSSKLRDRVRIHSSTVI 183 (357)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECSSCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEecccEEEeEeeccCCeEE
Confidence 3333444444444444444444444444444444444443 34444444444444442 3444444444444444
No 100
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.48 E-value=8.9e-13 Score=120.58 Aligned_cols=99 Identities=18% Similarity=0.187 Sum_probs=75.9
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-------------eeEECCCC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-------------NSIIGWKS 355 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-------------~s~i~~~~ 355 (411)
.+.+.+++.||+++.|+++|+|++++.||++|.|+++|.|. ++.||++|.|+.+++|. +++||+++
T Consensus 11 ~a~I~~~a~Ig~~v~I~~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~I~~~~~~~~~~g~~~~~~IG~~~ 90 (262)
T 2qia_A 11 TAIVEEGASIGANAHIGPFCIVGPHVEIGEGTVLKSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRN 90 (262)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSEEEECSSCEECTTCEEEECCSCTTCCSCCCEEEECSSC
T ss_pred CCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCCEECCCcEECCCCEEecceEECcCCccccccCCccceEECCCc
Confidence 56667777788888888888888888888888888888888 89999999999999997 68999999
Q ss_pred EECCCcEEecCCcCCcccceeEECCCCEECCCcEE
Q 015225 356 SLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 356 ~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v 390 (411)
.|++++.|..+.... .+.++||++++|+.++.|
T Consensus 91 ~Ig~~~~I~~~~~~~--~~~~~IG~~~~Ig~~~~I 123 (262)
T 2qia_A 91 RIRESVTIHRGTVQG--GGLTKVGSDNLLMINAHI 123 (262)
T ss_dssp EECTTCEEECCCTTT--TSEEEECSSCEECTTCEE
T ss_pred eeCCCCEEcCCccCC--CCcCEECCCcEEeeeeEE
Confidence 999999998642110 012555555555555444
No 101
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.48 E-value=9.7e-13 Score=124.78 Aligned_cols=75 Identities=20% Similarity=0.214 Sum_probs=38.7
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEE-EeeEECCCCEECCCcEEE-eeEECCCCEECCCcEEe
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRL-ISCIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQ 364 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~ 364 (411)
.+.+.+++.|++++.|+++++|+++++||++|+|+++|.| .++.||++|.|+.+++|. +++||++|.|++++.+.
T Consensus 103 ~a~i~~~a~ig~~~~I~~~~~I~~~v~IG~~~~I~~~~~Ig~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~g~~I~ 179 (341)
T 3eh0_A 103 SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIGQNCLIQSGTVVG 179 (341)
T ss_dssp TCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECTTCEEE
T ss_pred CcEECCCcEECCCCEECCCcEECCCcEECCCcEECCCcEECCCCEECCCcEECCCcEECCCCEECCccEEcCCcEEC
Confidence 4455555555555555555555555555555555555555 245555555555555553 45555555555555443
No 102
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.47 E-value=6.5e-13 Score=122.77 Aligned_cols=78 Identities=23% Similarity=0.354 Sum_probs=70.3
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-------------eeEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-------------NSIIGWK 354 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-------------~s~i~~~ 354 (411)
+.+.+.+++.|++++.|+++|+|++++.||++|+|+++|.|. ++.||++|.|+.+|.|. +++||++
T Consensus 27 p~a~I~~~a~ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~v~IG~~ 106 (283)
T 4eqy_A 27 PTAIIEPGAQLHETVEVGPYAIVGSNVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLVIGDR 106 (283)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSEEEECSSCEECTTEEEEECCCCTTCCCCCCEEEECSS
T ss_pred CCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEEcCCcEECCCCccccccCCCceEEECCC
Confidence 467888888899999999999999999999999999999998 79999999999999993 7899999
Q ss_pred CEECCCcEEecC
Q 015225 355 SSLGRWARVQGN 366 (411)
Q Consensus 355 ~~ig~~~~i~~~ 366 (411)
+.|++++.|..+
T Consensus 107 ~~Ig~~~~I~~g 118 (283)
T 4eqy_A 107 NTIREFTTIHTG 118 (283)
T ss_dssp CEECTTEEEECC
T ss_pred cccCcceeEccc
Confidence 999999999864
No 103
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.47 E-value=1.1e-12 Score=125.64 Aligned_cols=34 Identities=15% Similarity=0.140 Sum_probs=25.6
Q ss_pred eeEECCCCEECCCcEE-------cceEEcCCCEEcCCC-CCc
Q 015225 375 ITILGEAVTVEDEVVV-------INSIVLPNKVLNVSV-QEE 408 (411)
Q Consensus 375 ~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~-~~~ 408 (411)
.+.||++|+|+.++.| .+|+|+.++.|++++ |+.
T Consensus 280 ~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~V~k~v~~~~ 321 (372)
T 3pmo_A 280 SAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTMVTRSITEPG 321 (372)
T ss_dssp TCEECSSCEECTTCEECSSCEECSSEEECTTCEECSCBCSCE
T ss_pred CCEECCCeEEeCCCEECCCCEECCCCEEeeCCEEccCcCCCC
Confidence 3777777777777766 478888888888888 544
No 104
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.46 E-value=4.9e-13 Score=124.33 Aligned_cols=16 Identities=6% Similarity=0.050 Sum_probs=7.7
Q ss_pred cchhhcccCCC-ceEEE
Q 015225 233 QDILSPLAGKK-QLYTY 248 (411)
Q Consensus 233 ~d~l~~l~~~~-~v~~~ 248 (411)
++++..|-+.+ ++..+
T Consensus 74 ~~~~~~l~~~~~rva~~ 90 (316)
T 3tk8_A 74 AHAIEQLDRGALRVAEK 90 (316)
T ss_dssp HHHHHHHHTTSSCSEEE
T ss_pred HHHHHHHHhCCCEEeee
Confidence 55555554333 45444
No 105
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.46 E-value=1.2e-12 Score=119.95 Aligned_cols=78 Identities=22% Similarity=0.228 Sum_probs=69.5
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE-------------EeeEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV-------------LNSIIGWK 354 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i-------------~~s~i~~~ 354 (411)
+.+.+.+++.|++++.|+++|+|++++.||++|+|+++++|. ++.||++|.|+.++.| .+++||++
T Consensus 12 p~a~i~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~~~~~IG~~~~I~~~a~Ig~~~~~~~~~g~~~~~~IG~~ 91 (265)
T 4e6u_A 12 STAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNEIFQFASVGEVCQDLKYKGEETWLEIGNN 91 (265)
T ss_dssp TTCEECTTCEECTTCEECTTCEECTTEEECTTCEECSSCEECSSEEECSSCEECTTCEEEECCCCTTCCSCCCEEEECSS
T ss_pred CCCEECCCCEECCCCEECCCeEECCCCEECCCCEEcCCcEEeCCcEECCCCEEcCCcEECCccccccccCCCCeEEECCC
Confidence 467788888888888888899998899999999999999998 6999999999999999 47899999
Q ss_pred CEECCCcEEecC
Q 015225 355 SSLGRWARVQGN 366 (411)
Q Consensus 355 ~~ig~~~~i~~~ 366 (411)
+.|++++.|..+
T Consensus 92 ~~Ig~~~~I~~g 103 (265)
T 4e6u_A 92 NLIREHCSLHRG 103 (265)
T ss_dssp CEECTTCEEECC
T ss_pred eEECCceEECcc
Confidence 999999999854
No 106
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.46 E-value=6e-13 Score=130.49 Aligned_cols=185 Identities=14% Similarity=0.109 Sum_probs=131.0
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccC-CcchhHhHHHHhccCCC------CcEEEEecccchHHHHHHHh-hhc
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA-GQPMIQHPISACKRIPN------LAQIFLIGFYEEREFALYVS-SIS 74 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~~g------i~~I~Iv~~~~~~~i~~~~~-~~~ 74 (411)
++.+|||||| .||||+. ..||+|+|++ |+|++++.++++..+ + +.-+++.+.+..+.+++|++ ++
T Consensus 75 k~avViLAGG--lGTRLg~---~~PK~llpV~~gk~fLe~~ie~l~~~-~~~~g~~ip~viMtS~~t~e~t~~~f~~~~- 147 (505)
T 2oeg_A 75 STVVLKLNGG--LGTGMGL---CDAKTLLEVKDGKTFLDFTALQVQYL-RQHCSEHLRFMLMDSFNTSASTKSFLKARY- 147 (505)
T ss_dssp TEEEEEEECC--CCGGGTC---CSCGGGSEEETTEEHHHHHHHHHHHH-HHHTCTTCEEEEEECHHHHHHHHHHHHHHC-
T ss_pred cceEEEEcCC--cccccCC---CCCCcccccCCCCcHHHHHHHHHHHH-HHhcCCCcCEEEEeCCCCHHHHHHHHhhhh-
Confidence 5789999999 9999994 8899999999 999999999999986 5 44445555666788899998 53
Q ss_pred ccCCc---ceEEe-----------------------eCCCCCCChHHHHHH-----HHHhhccCCCeEEEEcCCccc-CC
Q 015225 75 NELKV---PVRYL-----------------------KEDKPHGSAGGLYYF-----RDMIMEENPSHIILLNCDVCC-SF 122 (411)
Q Consensus 75 ~~~~~---~i~~v-----------------------~~~~~~g~~~~l~~~-----~~~i~~~~~~~~lv~~~D~i~-~~ 122 (411)
+.+|. ++.+. ....+.|+++.+... ++.+.....++++|.++|.+. ..
T Consensus 148 ~~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~ 227 (505)
T 2oeg_A 148 PWLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATI 227 (505)
T ss_dssp HHHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCC
T ss_pred hccCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCcccccc
Confidence 23443 23211 111245999988644 344332335899999999987 45
Q ss_pred ChHHHHHHHHhcCCeeEEEEEecCcccc-cceeEEEEcC-----CCCc---------eeEEeccCCC--------cccCc
Q 015225 123 PLPDLLEAHKRYGGMGTMLVIKVSAESA-HQFGELIADP-----NTKE---------LLHYTEKPET--------FVSDL 179 (411)
Q Consensus 123 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~-----~~~~---------v~~~~e~~~~--------~~~~~ 179 (411)
++ .++.+|.++++++++.+++. ..+ ..+|++..++ .+|+ ++++.+-|.. ....+
T Consensus 228 D~-~llg~~~~~~ad~~~~v~~k--~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p~e~~~~~~g~~~f~~ 304 (505)
T 2oeg_A 228 DK-RVLAYMEKEKIDFLMEVCRR--TESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCPKADMESFQDINKYSF 304 (505)
T ss_dssp CH-HHHHHHHHHTCSEEEEEEEC--CTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSCGGGHHHHHCTTTTCE
T ss_pred CH-HHHHHHHhcCCcEEEEEEEe--cCCccceeEEEEecccccccCCccccccCceeEEEeccCChhhhhcccCccccCe
Confidence 66 88999999999999998886 554 4678776621 2455 5555554432 12334
Q ss_pred ccceEEEeCHHHHHHhhh
Q 015225 180 INCGVYVFTPDFFTAIQG 197 (411)
Q Consensus 180 ~~~Giyi~~~~~~~~l~~ 197 (411)
.|+...+|+-+.++.+.+
T Consensus 305 ~Ninn~~~~l~~l~~~~~ 322 (505)
T 2oeg_A 305 FNTNNLWIRLPVLLETMQ 322 (505)
T ss_dssp EEEEEEEEEHHHHHHHHH
T ss_pred eEEEEEEEEHHHHHHHHh
Confidence 689999999987765544
No 107
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.45 E-value=5.2e-13 Score=129.87 Aligned_cols=93 Identities=20% Similarity=0.266 Sum_probs=81.7
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNG 367 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~ 367 (411)
+++.+.+++.||+++.|++++.|.+++.||++|.|+++|.|. +++||++|.|+++|.|.+++|++++.|++++.+.+
T Consensus 237 ~~~~i~~~~~ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~i~~~~i~~~~~i~~~~~i~~-- 314 (401)
T 2ggo_A 237 DNVKIKGKVIIEEDAEIKSGTYIEGPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVEVKESVIMEGSKIPHLSYVGD-- 314 (401)
T ss_dssp SSCEEESCEEECTTCEECTTCEEESSEEECTTCEECSSCEECTTEEECSSCEEEETCEEESEEECTTCEEEESCEEES--
T ss_pred CCCEEcCCeEEcCCCEECCCCEEeCCeEECCCCEECCCCEEcCCcEECCCCEECCCCEEecCEEcCCcEECCCceEcc--
Confidence 456778888999999999999999999999999999999998 79999999999999999999999999999888866
Q ss_pred cCCcccceeEECCCCEECCCcEEc
Q 015225 368 DYNAKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 368 ~~~~~~~~~~i~~~~~i~~~~~v~ 391 (411)
++||++++|++++.+.
T Consensus 315 --------~~Ig~~~~Ig~~~~i~ 330 (401)
T 2ggo_A 315 --------SVIAEDVNFGAGTLIA 330 (401)
T ss_dssp --------CEECTTCEECTTCEEC
T ss_pred --------eEECCCcEECCCcEEc
Confidence 6777777777666553
No 108
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.45 E-value=6.1e-13 Score=131.57 Aligned_cols=118 Identities=18% Similarity=0.176 Sum_probs=78.0
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEE-eeEECCCC------------
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVL-NSIIGWKS------------ 355 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~-~s~i~~~~------------ 355 (411)
+++.+.+++.||+++.|+++|.|. ++.||++|.|+++|.|.+++||++|.|+++++|. ++.||+++
T Consensus 276 ~~~~i~~~~~Ig~~~~I~~~~~i~-~~~ig~~~~I~~~~~i~~~~ig~~~~I~~~~~i~~~~~ig~~~~ig~~~~i~~~~ 354 (456)
T 2v0h_A 276 VNVIIEGNVKLGDRVKIGTGCVLK-NVVIGNDVEIKPYSVLEDSIVGEKAAIGPFSRLRPGAELAAETHVGNFVEIKKST 354 (456)
T ss_dssp SSEEEEEEEEECTTCEECTTCEEE-EEEECTTCEECSSCEEEEEEECTTCEECSSEEECTTCEECTTCEEEEEEEEESCE
T ss_pred CCcEEcCCcEECCCCEECCCCEEE-eEEEeCCCEEcCCeEEccCcCCCCcEECCccEECCCCEECCCCEECCCCEEeccE
Confidence 345555666677777777777776 6777888888888887777777777777766665 44444444
Q ss_pred ----------------------EECCCcEEecCCcCCcccceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCC
Q 015225 356 ----------------------SLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQ 406 (411)
Q Consensus 356 ----------------------~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~ 406 (411)
.||+++.+.+... .....+.||++|+||.++.| .+++|+++++|++++|
T Consensus 355 i~~~~~i~~~~~~~~~~Ig~~v~Ig~~~~i~~~~~--~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s~v~~~v~ 432 (456)
T 2v0h_A 355 VGKGSKVNHLTYVGDSEIGSNCNIGAGVITCNYDG--ANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGTTITRDVG 432 (456)
T ss_dssp ECTTCEEEEEEEEESEEECTTCEECTTCEEEECSS--SSCCCEEECSSCEECTTCEEEESEEECTTCEECTTCEECSCBC
T ss_pred ECCCCEeccceeecCcEECCCcEECCceEEecccc--ccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCCEECCCcC
Confidence 4444443332000 00013888999999988877 4788889999999888
Q ss_pred Ccc
Q 015225 407 EEI 409 (411)
Q Consensus 407 ~~~ 409 (411)
+..
T Consensus 433 ~~~ 435 (456)
T 2v0h_A 433 ENE 435 (456)
T ss_dssp TTC
T ss_pred CCC
Confidence 653
No 109
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.45 E-value=1.8e-12 Score=124.08 Aligned_cols=18 Identities=17% Similarity=0.234 Sum_probs=11.6
Q ss_pred eeEECCCCEECCCcEEec
Q 015225 348 NSIIGWKSSLGRWARVQG 365 (411)
Q Consensus 348 ~s~i~~~~~ig~~~~i~~ 365 (411)
+++||++|.||+++.|..
T Consensus 222 ~v~IGd~v~IGa~~~I~~ 239 (372)
T 3pmo_A 222 GVTIGDDVEIGANTTIDR 239 (372)
T ss_dssp CEEECSSCEECTTCEEEC
T ss_pred CeEECCCCEECCCcEEcc
Confidence 466667777776666653
No 110
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.44 E-value=1.2e-12 Score=118.48 Aligned_cols=97 Identities=26% Similarity=0.345 Sum_probs=84.0
Q ss_pred CcEECCCCEECCCCEECCCcEECCCcEECCCcEEEee-----EECCCCEECCCcEEEe----------------------
Q 015225 296 DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISC-----IVLDDVEIKENAVVLN---------------------- 348 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~-----~i~~~~~i~~~~~i~~---------------------- 348 (411)
...|+++++|+++|.|.+++.||++|.|+++|.|... +||++|.|+++|+|..
T Consensus 59 ~~~I~~~~~I~~~a~I~g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~g~~~~~~~~~~~~~~ 138 (247)
T 1qre_A 59 APVIDPTAYIDPQASVIGEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHALETINEEGEPIEDNIVEVDGKE 138 (247)
T ss_dssp CCEECTTCEECTTCEEEESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEECCSBCTTSCBCGGGCEEETTEE
T ss_pred CcEECCCcEECCCCEEeCCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEecccccccCcccccceeeccCcc
Confidence 4568888888888888889999999999999999843 8999999999999972
Q ss_pred --eEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE------cceEEcCCCEE
Q 015225 349 --SIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV------INSIVLPNKVL 401 (411)
Q Consensus 349 --s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v------~~~~i~~~~~v 401 (411)
++||++|.||++|.|.++ ++||++|+||+++.| .+|+|++|++|
T Consensus 139 ~~v~IG~~v~Ig~~~~I~~~---------~~Ig~~v~IG~~a~I~~v~Ig~~~~IgagsvV 190 (247)
T 1qre_A 139 YAVYIGNNVSLAHQSQVHGP---------AAVGDDTFIGMQAFVFKSKVGNNCVLEPRSAA 190 (247)
T ss_dssp ESEEECTTCEECTTCEEEEE---------EEECTTCEECTTCEEEEEEECTTCEECTTCEE
T ss_pred CceEECCCCEECCCCEEcCC---------cEECCCCEECCCCEEeceEECCCCEECCCCEE
Confidence 899999999999999887 899999999999876 46677777777
No 111
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=99.43 E-value=6.5e-13 Score=130.44 Aligned_cols=98 Identities=17% Similarity=0.203 Sum_probs=82.5
Q ss_pred CCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccc
Q 015225 295 GDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLG 374 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~ 374 (411)
....+++++.|+++++|.+++.||++|.|+++|.|.+++||++|.|+++|+|.+|+||++|.|++++.+.+
T Consensus 272 ~~~~I~~~a~I~p~a~i~g~v~IG~~~~I~~~a~I~~v~IG~~~~I~~~~~I~~~vIG~~~~Ig~~a~I~g--------- 342 (496)
T 3c8v_A 272 SGAGSASGASVSGYAVIKGDTVIGENVLVSQRAYLDNAWMGKGSNAQENCYIINSRLERNCVTAHGGKIIN--------- 342 (496)
T ss_dssp ----CCTTCEECTTSEEESSCEECTTCEECTTCEEEEEEECTTCEECTTCEEEEEEEEESCEECTTCEEES---------
T ss_pred cCcccCCCcEECCCcEEeCCeEECCCCEECCCcEEeceEecCCCEECCCceEeceEeCCCCEECCCcEEcC---------
Confidence 35677888999999999889999999999999999999999999999999999999999999999999876
Q ss_pred eeEECCCCEECCCcEEc-----------ceEEcCCCEEc
Q 015225 375 ITILGEAVTVEDEVVVI-----------NSIVLPNKVLN 402 (411)
Q Consensus 375 ~~~i~~~~~i~~~~~v~-----------~~~i~~~~~v~ 402 (411)
++||++|+||+++.|. +|+||+|++|.
T Consensus 343 -v~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~ 380 (496)
T 3c8v_A 343 -AHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIID 380 (496)
T ss_dssp -EEEEETCEECTTCEEECCSSSCEEECTTCEECTTCEEE
T ss_pred -ceECCCcEECCCCEEeCCCCcceEECCCCEECCCCEEe
Confidence 7888888888777662 44555566665
No 112
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.43 E-value=2e-12 Score=120.68 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=24.0
Q ss_pred cEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEE
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVV 346 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i 346 (411)
+.+.+++.|++++.|+++|+|++++.||++|+|+++++|. ++.||++|.|+.+++|
T Consensus 14 A~I~~~a~Ig~~v~Ig~~~~I~~~v~IG~~~~I~~~~~I~g~~~IG~~~~I~~~a~I 70 (305)
T 3t57_A 14 AVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVLMTGAVV 70 (305)
T ss_dssp SEECTTSEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECTTCEECTTCEE
T ss_pred CEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCcEEccCcEe
Confidence 3344444444444444444444444444444444444443 3444444444444444
No 113
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.43 E-value=7.6e-13 Score=131.36 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=27.7
Q ss_pred eEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 376 TILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
++||++|+||.++.| .+++|++|+.|.+++|+..
T Consensus 403 ~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s~v~~~v~~~~ 443 (468)
T 1hm9_A 403 TVIGDNVFVGSNSTIIAPVELGDNSLVGAGSTITKDVPADA 443 (468)
T ss_dssp EEECTTCEECTTCEEESSCEECTTCEECTTCEECSCBCTTC
T ss_pred cEECCCeEECCCCEEeCCcEECCCCEECCCCEECCCCCCCC
Confidence 788888888888765 5788899999999888754
No 114
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.43 E-value=1.3e-12 Score=119.81 Aligned_cols=102 Identities=15% Similarity=0.115 Sum_probs=72.1
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEE-eeEECC--------CCEECC
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVL-NSIIGW--------KSSLGR 359 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~-~s~i~~--------~~~ig~ 359 (411)
+.++.+++.|++++.|++++.|+++ +++.++.||++|.|. +++|+++|.||++|.|. ++.|+. .+.||+
T Consensus 104 g~~I~p~a~I~~~~~Ig~g~~I~~~-~i~~~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~g~~~~~~~~~v~IGd 182 (276)
T 3gos_A 104 GFRVVPPATVRKGAFIARNTVLMPS-YVNIGAFVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED 182 (276)
T ss_dssp CCEECTTCEEBTTCEECTTCEECSE-EECTTCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTSCCCEECT
T ss_pred CcEECCCcEECCCCEECCCCEEcCC-EEcCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCccccCCCCCeEECC
Confidence 5667777888888888888888765 788888888888887 67888888888888877 666644 577777
Q ss_pred CcEEecCCcCCcccceeEECCCCEECCCcEE-cceEEcCCCEE
Q 015225 360 WARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVL 401 (411)
Q Consensus 360 ~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v 401 (411)
+|.|+.+ |+|..+++||++++| .+++|.+++.+
T Consensus 183 ~v~IG~~---------a~I~~gv~IG~~avIgagsvV~~~~~I 216 (276)
T 3gos_A 183 NCFVGAR---------SEVVEGVIVEEGSVISMGVFIGQSTRI 216 (276)
T ss_dssp TCEECTT---------CEECTTCEECTTCEECTTCEECTTCCE
T ss_pred CCEECCC---------CEECCCCEECCCCEECCCCEECCCcEE
Confidence 7666666 666666666665555 34555544433
No 115
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.43 E-value=5.3e-13 Score=121.25 Aligned_cols=88 Identities=20% Similarity=0.285 Sum_probs=67.9
Q ss_pred CCcEECCCCEECCCCEEC--CCcEECCCcEECCCcEEE----eeEECCCCEECCCcEEEee-------------------
Q 015225 295 GDVYIHPSAKVHPTAKIG--PNVSISANVRVGAGVRLI----SCIVLDDVEIKENAVVLNS------------------- 349 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i~--~~~~ig~~~~i~~~~~i~----~~~i~~~~~i~~~~~i~~s------------------- 349 (411)
.++.||+++.|.+++.|. .+++||++|.|+++|.|. +++||++|.||++|.|.++
T Consensus 84 ~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~ 163 (252)
T 3jqy_B 84 NYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKD 163 (252)
T ss_dssp CEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCC
T ss_pred CeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCC
Confidence 345677777777777774 367888888888888888 7888888888888888864
Q ss_pred -EECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEc
Q 015225 350 -IIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 350 -~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~ 391 (411)
+||++|.||++|.|..+ +.||++|+|+++++|.
T Consensus 164 v~Igd~v~IG~~a~I~~g---------v~IG~~~~IgagsvV~ 197 (252)
T 3jqy_B 164 IIISSYVWVGRNVSIMKG---------VSVGSGSVIGYGSIVT 197 (252)
T ss_dssp EEECSSCEECSSEEECTT---------CEECTTCEECTTCEEC
T ss_pred eEEecCcEECCCCEECCC---------CEECCCCEECCCCEEC
Confidence 77777777777777776 7777777777777773
No 116
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.42 E-value=1.4e-12 Score=120.93 Aligned_cols=99 Identities=22% Similarity=0.252 Sum_probs=48.5
Q ss_pred CcEECCCCEECCCCEECCCcEECCCcEECCCcEEEe---------eEECCCCEECCCcEEE-eeEECCCCEECCCcEEec
Q 015225 296 DVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLIS---------CIVLDDVEIKENAVVL-NSIIGWKSSLGRWARVQG 365 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~ 365 (411)
+++||+++.|.++++|+.++.||++|.|+.++.|.+ ++||++|.||.+|.|. +++||++|+||+++.|..
T Consensus 158 ~~~IG~~~~I~~~~~Ig~~~~IG~~v~I~~~~~i~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~ 237 (304)
T 3eg4_A 158 GAYVDKGAMIDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGK 237 (304)
T ss_dssp TCEECTTCEECTTEEECTTCEECTTCEECTTCEECCCCSSTTCCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECT
T ss_pred CCEECCCcEEcCCcEECCCCccCCCcEECCCCEECCccccCccCCeEEcCCCEECCCCEEcCCcEECCCcEECCCCEEcC
Confidence 333333344443444444444444444444444443 5666666666666554 455555555555544444
Q ss_pred CCcCCcccceeEECCCCEECC--CcEE-cceEEcCCCEEcCC
Q 015225 366 NGDYNAKLGITILGEAVTVED--EVVV-INSIVLPNKVLNVS 404 (411)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~i~~--~~~v-~~~~i~~~~~v~~~ 404 (411)
+ +.|++++. +. ...| .++++++|++|.++
T Consensus 238 g---------~~Igd~~~-g~~~~~~Ip~~svV~~Gs~v~kd 269 (304)
T 3eg4_A 238 S---------TKIVDRAT-GEVFYGEVPPYSVVVAGTMPGKN 269 (304)
T ss_dssp T---------CCEEETTT-CCEECSEECTTEEEEEEEEECCC
T ss_pred C---------eEECccce-eeeccCEeCCCCEEecCcEecCC
Confidence 4 44444431 00 0123 46777777777665
No 117
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.42 E-value=2e-12 Score=124.23 Aligned_cols=53 Identities=15% Similarity=0.137 Sum_probs=28.2
Q ss_pred CCcEECCCcEECCCcEE-EeeEECCCCEECCCcEEE---------------------eeEECCCCEECCCcEEec
Q 015225 313 PNVSISANVRVGAGVRL-ISCIVLDDVEIKENAVVL---------------------NSIIGWKSSLGRWARVQG 365 (411)
Q Consensus 313 ~~~~ig~~~~i~~~~~i-~~~~i~~~~~i~~~~~i~---------------------~s~i~~~~~ig~~~~i~~ 365 (411)
+++.||++|.|+++|+| .+++||++|.|+.+++|. .++|+++|.||+++.|..
T Consensus 171 ~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~Ig~~~~~~~~~~~~~~~~i~~~g~v~Ig~~v~IG~~~~I~~ 245 (374)
T 2iu8_A 171 AYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSAFGQHKHLKHLGKVIIEDDVEIGANTTIDR 245 (374)
T ss_dssp TTCEECTTCEECTTCEECSSEEECTTCEECTTCEEEEECSCEEEETTTEEEECCCCCCEEECTTCEECTTCEEEE
T ss_pred CCcEECCceeeCCCcEEcccceECCCCEECCCCEECcCCcccccccCCceeEeeeeccEEECCCCEECCCcEEcc
Confidence 33344444444444444 245556666666666653 256666666666666654
No 118
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.41 E-value=5.3e-13 Score=122.09 Aligned_cols=97 Identities=13% Similarity=0.115 Sum_probs=77.2
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-----eeEECCCCEECCCcEEEe---------eEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-----SCIVLDDVEIKENAVVLN---------SIIGWK 354 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------s~i~~~ 354 (411)
.+..|++.+.|++++.|+++++|+++++|+.++.||++|.|. +++||++|.|+.+|.|.. ++||++
T Consensus 183 ~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~igv~IGdnv~IgpGa~IgG~~~~~~~~~V~IGdn 262 (347)
T 3r5d_A 183 AGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAGVFVGKGSDLGGGCSTMGTLSGGGNIVISVGEG 262 (347)
T ss_dssp TTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTTCEECTTEEECTTCEECC------CCCCEECTT
T ss_pred CCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEeEEECCCCEECCCCEEccccCCCCccceEECCC
Confidence 467777777777777777777777777777777777777775 378999999999998874 789999
Q ss_pred CEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-cceEEc
Q 015225 355 SSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIVL 396 (411)
Q Consensus 355 ~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~ 396 (411)
|.||.++.| + +.||++|+|++|++| +++.|+
T Consensus 263 v~IGAnAtI--G---------VtIGd~~iIGAGSVVtkdt~I~ 294 (347)
T 3r5d_A 263 CLIGANAGI--G---------IPLGDRNIVEAGLYITAGTKVA 294 (347)
T ss_dssp CEECTTCEE--C---------SCBCTTCEECTTCEECTTCEEE
T ss_pred CEECCCCEE--e---------eEECCCCEECCCCEECCCCEEE
Confidence 999999988 4 888888888888888 566664
No 119
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.39 E-value=6.9e-13 Score=122.69 Aligned_cols=91 Identities=22% Similarity=0.195 Sum_probs=60.4
Q ss_pred CcEEcCCcEECCCCEE--CCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEeeEECCCCEECCCcEEecC
Q 015225 290 SATIAGDVYIHPSAKV--HPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGN 366 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v--~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~ 366 (411)
+..+++++.||++++| +.+++|++++.||++|.|+++++|+ ++.+++++.++.++. .+++||++|.||++|.|.++
T Consensus 163 gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~-~~~~IGd~v~IGaga~Ilgg 241 (313)
T 3q1x_A 163 SIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTK-RHPTVGDYVTIGTGAKVLGN 241 (313)
T ss_dssp CCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSS-CSCEECSSCEECTTCEEESS
T ss_pred CeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCc-cCCEECCCCEECCCCEECCC
Confidence 4455566666666666 3345555555555555555555553 244444444444331 34599999999999999988
Q ss_pred CcCCcccceeEECCCCEECCCcEE
Q 015225 367 GDYNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 367 ~~~~~~~~~~~i~~~~~i~~~~~v 390 (411)
++||++|+||+|++|
T Consensus 242 ---------v~IG~~a~IGagsvV 256 (313)
T 3q1x_A 242 ---------IIVGSHVRIGANCWI 256 (313)
T ss_dssp ---------CEECSSEEECTTCEE
T ss_pred ---------cEECCCCEECCCCEE
Confidence 999999999999999
No 120
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.39 E-value=1.3e-12 Score=118.66 Aligned_cols=115 Identities=16% Similarity=0.131 Sum_probs=90.8
Q ss_pred CCcEECCCCEECCCCEE----CCCcEECCCcEECCCcEEE---eeEECCCCEECCCcEEE----eeEECCCCEECCCcEE
Q 015225 295 GDVYIHPSAKVHPTAKI----GPNVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVL----NSIIGWKSSLGRWARV 363 (411)
Q Consensus 295 ~~~~i~~~~~v~~~~~i----~~~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~----~s~i~~~~~ig~~~~i 363 (411)
..+.|++++.+.+.+.+ ..++.||++|.|++++.|. +++||++|.|+++|+|. +++||++|.||+++.|
T Consensus 62 ~~v~I~~~~~i~~~~~i~~g~~~~v~Ig~~~~I~~~~~i~~g~~v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I 141 (252)
T 3jqy_B 62 NKLIIEDDVECRWLTVIFRGDNNYVRIHKNSKIKGDIVATKGSKVIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVIL 141 (252)
T ss_dssp CEEEECTTCEEEEEEEEEESSSCEEEECTTCEEEEEEEEESSCEEEECTTCEECTTCEEECSSSEEEECTTCEECSSEEE
T ss_pred CEEEEcCCcEEecceEEEeCCCCeEEECCCCEECCceEEccCCEEEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEE
Confidence 35677777777766666 4567899999999888885 79999999999999999 8999999999999999
Q ss_pred ecCCcCC----------cccceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCcc
Q 015225 364 QGNGDYN----------AKLGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 364 ~~~~~~~----------~~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~~ 409 (411)
.++..++ ...+.++||++|+||+++.| .+|+|++|++|++++|+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~~vp~~~ 204 (252)
T 3jqy_B 142 RASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGSGSVIGYGSIVTKDVPSMC 204 (252)
T ss_dssp ECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred ecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECCCCEECCCCEECcccCCCC
Confidence 8753221 22244677777777777655 6899999999999988753
No 121
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.38 E-value=1.4e-12 Score=118.46 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=82.6
Q ss_pred CCCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEE-----eeEECCCCEECCCcEEEe---------eEECC
Q 015225 288 ITSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-----SCIVLDDVEIKENAVVLN---------SIIGW 353 (411)
Q Consensus 288 ~~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------s~i~~ 353 (411)
+.++.|++.++|.+++.|+++++|+++++|..++.|+.+|.|. +++||++|.|+.++.|.. ++||+
T Consensus 159 ~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~~~~~~~V~IGD 238 (332)
T 3fsy_A 159 PTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLSGGGTHVISIGK 238 (332)
T ss_dssp CTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC---CCBCEECT
T ss_pred CCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCCCCCccceEECC
Confidence 3567777777888888888888888778888888888888875 378999999999999974 89999
Q ss_pred CCEECCCcEEecCCcCCcccceeEECCCCEECCCcEE-cceEE--cCCCEEcC
Q 015225 354 KSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVV-INSIV--LPNKVLNV 403 (411)
Q Consensus 354 ~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i--~~~~~v~~ 403 (411)
+|.||+++.| + +.||++|+|++|++| +++.| .+|.+++.
T Consensus 239 nv~IGanAtI--g---------VtIGd~~iIGAGSVVtkdt~I~~~~g~~v~a 280 (332)
T 3fsy_A 239 RCLLGANSGL--G---------ISLGDDCVVEAGLYVTAGTRVTMPDSNSVKA 280 (332)
T ss_dssp TCEECTTCEE--C---------SCBCSSCEECTTCEECTTCEEECTTSCEEEG
T ss_pred CCEECCCCEE--e---------eEECCCCEECCCCEECCCCEEEeCCCCEEEh
Confidence 9999999999 4 899999999999888 44443 24555544
No 122
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.38 E-value=2.2e-12 Score=114.28 Aligned_cols=112 Identities=19% Similarity=0.188 Sum_probs=52.6
Q ss_pred cEECCCCEECCC-CEECCC---cEECCCcEECCCcEEEe----eEECCCCEECCCcEE----EeeEECCCCEECCCcEEe
Q 015225 297 VYIHPSAKVHPT-AKIGPN---VSISANVRVGAGVRLIS----CIVLDDVEIKENAVV----LNSIIGWKSSLGRWARVQ 364 (411)
Q Consensus 297 ~~i~~~~~v~~~-~~i~~~---~~ig~~~~i~~~~~i~~----~~i~~~~~i~~~~~i----~~s~i~~~~~ig~~~~i~ 364 (411)
++|++++.|.+. +.|.++ +.||++|.|++++.|.. +.||++|.|++++.+ .+++||++|.|++++.|.
T Consensus 37 v~Ig~~~~I~~~~~~i~g~~~~v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~ 116 (215)
T 2wlg_A 37 VYIGNNCKIVSSNIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIR 116 (215)
T ss_dssp EEECTTCEEESCEEEEESSSCEEEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEE
T ss_pred EEECCCCEEeCceEEEEcCCCEEEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEE
Confidence 445555555444 344332 55555555555555542 555555555553333 244555555555555555
Q ss_pred cCCcCCc----------ccceeEECCCCEECCCcEE-------cceEEcCCCEEcCCCCCc
Q 015225 365 GNGDYNA----------KLGITILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQEE 408 (411)
Q Consensus 365 ~~~~~~~----------~~~~~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~~ 408 (411)
....++. ..+.++||++++||+++.| .+|+|+++++|++++|+.
T Consensus 117 ~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~~~vIgagsvV~~~vp~~ 177 (215)
T 2wlg_A 117 NTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVVGSHTVLYKSFKEP 177 (215)
T ss_dssp SCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECSSCEECTTCEECSCCCCC
T ss_pred CCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECCCCEECCCCEEcCccCCC
Confidence 4211110 0122444444444444433 355555556665555543
No 123
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.36 E-value=4e-12 Score=112.63 Aligned_cols=96 Identities=18% Similarity=0.168 Sum_probs=83.1
Q ss_pred cEECCCCEECCCCEECC---CcEECCCcEECCCcEE----EeeEECCCCEECCCcEEEe--------------------e
Q 015225 297 VYIHPSAKVHPTAKIGP---NVSISANVRVGAGVRL----ISCIVLDDVEIKENAVVLN--------------------S 349 (411)
Q Consensus 297 ~~i~~~~~v~~~~~i~~---~~~ig~~~~i~~~~~i----~~~~i~~~~~i~~~~~i~~--------------------s 349 (411)
+.||+++.|++++.|.+ ++.||++|.|++.+.+ .+++||++|.|+++|+|.+ +
T Consensus 59 v~IG~~~~I~~~~~i~~~~~~~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v 138 (215)
T 2wlg_A 59 LFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDV 138 (215)
T ss_dssp EEECTTCEEESEEEEECTTCEEEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCE
T ss_pred EEECCCCEECCCeEEEcCCceEEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCe
Confidence 78999999999888873 4999999999996655 5899999999999999995 3
Q ss_pred EECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 350 IIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 350 ~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
+||++|.||.++.|..+ +.||++|.|+++++|... +.+++++.
T Consensus 139 ~Igd~v~IG~~~~I~~g---------v~Ig~~~vIgagsvV~~~-vp~~~i~~ 181 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKG---------VCIPNNVVVGSHTVLYKS-FKEPNCVI 181 (215)
T ss_dssp EECTTCEECTTCEECTT---------CEECSSCEECTTCEECSC-CCCCSCEE
T ss_pred EECCCcEECCCCEECCC---------CEECCCCEECCCCEEcCc-cCCCeEEE
Confidence 99999999999999998 999999999999999543 46666555
No 124
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.34 E-value=4.9e-12 Score=110.17 Aligned_cols=71 Identities=17% Similarity=0.224 Sum_probs=41.8
Q ss_pred ECCCcEECCCcEECCCcEEE---eeEECCCCEECCCcEEEe-------------------eEECCCCEECCCcEEecCCc
Q 015225 311 IGPNVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVLN-------------------SIIGWKSSLGRWARVQGNGD 368 (411)
Q Consensus 311 i~~~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~~-------------------s~i~~~~~ig~~~~i~~~~~ 368 (411)
++.++.||++|.|+.+|+|. ..+||++|.||.+|.|.. ++||++|.||.++.|..+
T Consensus 73 ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g-- 150 (195)
T 3nz2_A 73 FGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQG-- 150 (195)
T ss_dssp CSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTT--
T ss_pred eCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCC--
Confidence 34445555555555555553 236777777777776653 366666666666666555
Q ss_pred CCcccceeEECCCCEECCCcEE
Q 015225 369 YNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 369 ~~~~~~~~~i~~~~~i~~~~~v 390 (411)
+.||++++|++|++|
T Consensus 151 -------v~IG~~~vIgagsvV 165 (195)
T 3nz2_A 151 -------VTIGARSVVAANSVV 165 (195)
T ss_dssp -------CEECTTCEECTTCEE
T ss_pred -------CEECCCCEECCCCEE
Confidence 666666666666555
No 125
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.34 E-value=3e-11 Score=114.88 Aligned_cols=185 Identities=16% Similarity=0.242 Sum_probs=136.4
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCccc---CCcchhHhHHHHhcc------------CCCCcEEEEecccchHHHH
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPL---AGQPMIQHPISACKR------------IPNLAQIFLIGFYEEREFA 67 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi---~g~pli~~~l~~l~~------------~~gi~~I~Iv~~~~~~~i~ 67 (411)
++.+|+|||| .||||+. ..||+|+|| .|+|++++.++.+.+ ..++.-+++.+.+..+.++
T Consensus 35 kvavvlLAGG--~GTRLG~---~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~IMtS~~t~e~t~ 109 (405)
T 3oc9_A 35 KTALITPAGG--QGSRLGF---EHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWFLMTNEETIEEIN 109 (405)
T ss_dssp CEEEEEECCS--BCTTTTC---CSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEEEEECTTTHHHHH
T ss_pred ceEEEEecCC--CcccccC---CCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEEEEeCCccHHHHH
Confidence 5789999999 9999966 899999999 999999999988853 1278877777777788899
Q ss_pred HHHhhhcccCCc---ceEEeeC---------------------CCCCCChHHHHHH-----HHHhhccCCCeEEEEcCCc
Q 015225 68 LYVSSISNELKV---PVRYLKE---------------------DKPHGSAGGLYYF-----RDMIMEENPSHIILLNCDV 118 (411)
Q Consensus 68 ~~~~~~~~~~~~---~i~~v~~---------------------~~~~g~~~~l~~~-----~~~i~~~~~~~~lv~~~D~ 118 (411)
+++++. +.+|. .+.+..| ..+.|+++.+... ++.+....-+++++...|.
T Consensus 110 ~~f~~~-~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 110 NYFKEH-QYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHT-GGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHhC-cccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 999874 33454 3554332 2245777766543 2333333457899999999
Q ss_pred -ccCCChHHHHHHHHhcCCeeEEEEEecCcccc-cceeEEEE-cCCCCceeEEeccCCC---------cccCcccceEEE
Q 015225 119 -CCSFPLPDLLEAHKRYGGMGTMLVIKVSAESA-HQFGELIA-DPNTKELLHYTEKPET---------FVSDLINCGVYV 186 (411)
Q Consensus 119 -i~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~-d~~~~~v~~~~e~~~~---------~~~~~~~~Giyi 186 (411)
+.......++.+|.++++++++-+.+. ..+ ...|.+.. | ...+|++|.|.|.. ...+..|.++++
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k--~~~dek~Gvl~~~d-g~~~vvEysei~~e~e~~~~~g~l~fn~~Ni~~h~ 265 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKK--GFKEEKVGVLVKEQ-ERIKVVEYTELTDELNKQLSNGEFIYNCGHISING 265 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEEC--CSTTCSCCEEEEET-TEEEEECGGGCCTTTTCBCTTSCBSSCEEEEEEEE
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEEC--CCCCCccceEEEEC-CeeEEEEEeeCCHHHhhcCCCCceeeccceeEeee
Confidence 567777889999999999988888776 444 67787764 4 34478888886543 123345788999
Q ss_pred eCHHHHHHhh
Q 015225 187 FTPDFFTAIQ 196 (411)
Q Consensus 187 ~~~~~~~~l~ 196 (411)
|+.++++.+.
T Consensus 266 fs~~fL~~i~ 275 (405)
T 3oc9_A 266 YSTSFLEKAA 275 (405)
T ss_dssp EEHHHHHHHT
T ss_pred cCHHHHHHhh
Confidence 9999988765
No 126
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.34 E-value=1.5e-11 Score=120.86 Aligned_cols=186 Identities=17% Similarity=0.264 Sum_probs=133.5
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccC---CcchhHhHHHHhccCC-------C------CcEEEEecccchHHH
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA---GQPMIQHPISACKRIP-------N------LAQIFLIGFYEEREF 66 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~---g~pli~~~l~~l~~~~-------g------i~~I~Iv~~~~~~~i 66 (411)
++.+|+|||| .||||.. ..||+|+||+ |+|++++.++.+..+. | +..+++.+.+..+.+
T Consensus 103 kvavvlLaGG--~GTRLg~---~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t~~~t 177 (486)
T 2yqc_A 103 EVAVLLMAGG--QGTRLGS---SAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPTRNAT 177 (486)
T ss_dssp CEEEEEEEES--BCGGGTC---SSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGGHHHH
T ss_pred CeEEEEEcCC--ccccCCC---CCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCCHHHH
Confidence 6899999999 9999954 8899999999 9999999999988741 3 788888888888889
Q ss_pred HHHHhhhcccCCc---ceEEeeCC----------------------CCCCChHHHHHH-----HHHhhccCCCeEEEEcC
Q 015225 67 ALYVSSISNELKV---PVRYLKED----------------------KPHGSAGGLYYF-----RDMIMEENPSHIILLNC 116 (411)
Q Consensus 67 ~~~~~~~~~~~~~---~i~~v~~~----------------------~~~g~~~~l~~~-----~~~i~~~~~~~~lv~~~ 116 (411)
++++++. +.+|. .+.+..|. .+.|+++.+... ++.+...+-+++.+...
T Consensus 178 ~~~~~~~-~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 178 ESFFIEN-NYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHHT-GGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHhhc-cccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 9999874 33454 33322221 255888876544 23333334688889999
Q ss_pred CcccC--CChHHHHHHHHhcCCeeEEEEEecCcccc-cceeEEEEcCCCC--ceeEEeccCCC------------cccCc
Q 015225 117 DVCCS--FPLPDLLEAHKRYGGMGTMLVIKVSAESA-HQFGELIADPNTK--ELLHYTEKPET------------FVSDL 179 (411)
Q Consensus 117 D~i~~--~~l~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~g~v~~d~~~~--~v~~~~e~~~~------------~~~~~ 179 (411)
|.+.. .| ..++.+|.++++++++.+.+. ..+ ...|.+.....++ +|++|.|.|.. .....
T Consensus 257 DN~l~~~~D-p~~lg~~~~~~~~~~~~vv~k--~~~~e~~Gvl~~~~~dg~~~vvEy~E~~~~~~~~~~~~~~~~~~~~~ 333 (486)
T 2yqc_A 257 DNCLVKVAD-PIFIGFAIAKKFDLATKVVRK--RDANESVGLIVLDQDNQKPCVIEYSEISQELANKKDPQDSSKLFLRA 333 (486)
T ss_dssp TBTTCCTTC-HHHHHHHHHHTCSEEEEEEEC--CSTTCCCCEEEEETTTTEEEEECGGGSCHHHHHCEETTEEEEESSCE
T ss_pred CCceeeccC-HHHHHHHHHcCCCEEEEEEEc--CCCCCceeEEEEEecCCCEEEEEEecCCHHHhhcccccccccccccc
Confidence 98753 34 457888888999988877764 333 5678776431144 58888887631 12457
Q ss_pred ccceEEEeCHHHHHH-hhh
Q 015225 180 INCGVYVFTPDFFTA-IQG 197 (411)
Q Consensus 180 ~~~Giyi~~~~~~~~-l~~ 197 (411)
.|+|+|+|+.++++. +.+
T Consensus 334 ~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 334 ANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp EEEEEEEEEHHHHHHHHHH
T ss_pred eeEEEEEEeHHHHHHHHHh
Confidence 799999999999887 554
No 127
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.34 E-value=1.6e-12 Score=119.02 Aligned_cols=107 Identities=13% Similarity=0.060 Sum_probs=71.1
Q ss_pred EECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCccccee
Q 015225 298 YIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGIT 376 (411)
Q Consensus 298 ~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~ 376 (411)
.+++++.|++.++|.+++.||+++.|++++.|. ++.||++|+|..++.+. ++||++|.|++++.|.++-.. ...+.+
T Consensus 180 vI~~gv~I~P~AvI~~GA~IGeGv~Igp~a~Vn~na~IGdg~iI~~~a~ig-v~IGdnv~IgpGa~IgG~~~~-~~~~~V 257 (347)
T 3r5d_A 180 VVPAGVRIADTARVRLGAYIGEGTTVMHEGFVNFNAGTEGPGMIEGRVSAG-VFVGKGSDLGGGCSTMGTLSG-GGNIVI 257 (347)
T ss_dssp CCCTTEEESSGGGBBTTEEECTTEEECTTCEECTTEEESSSEEECSEECTT-CEECTTEEECTTCEECC-------CCCC
T ss_pred eccCCcEECCcCEECCCCEECCCCEECCCCEECCCCEECCCcEEcCCceEe-EEECCCCEECCCCEEccccCC-CCccce
Confidence 344555555555555555555555555555554 45558888887776654 889999999999988763111 112237
Q ss_pred EECCCCEECCCcEE-----cceEEcCCCEEcCCCC
Q 015225 377 ILGEAVTVEDEVVV-----INSIVLPNKVLNVSVQ 406 (411)
Q Consensus 377 ~i~~~~~i~~~~~v-----~~~~i~~~~~v~~~~~ 406 (411)
+||++|+||+++.| .+|+|++|++|.++.+
T Consensus 258 ~IGdnv~IGAnAtIGVtIGd~~iIGAGSVVtkdt~ 292 (347)
T 3r5d_A 258 SVGEGCLIGANAGIGIPLGDRNIVEAGLYITAGTK 292 (347)
T ss_dssp EECTTCEECTTCEECSCBCTTCEECTTCEECTTCE
T ss_pred EECCCCEECCCCEEeeEECCCCEECCCCEECCCCE
Confidence 88888888888877 6899999999988764
No 128
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.33 E-value=1.8e-11 Score=106.20 Aligned_cols=70 Identities=13% Similarity=0.164 Sum_probs=45.5
Q ss_pred CCcEECCCcEECCCcEEE---eeEECCCCEECCCcEEEe-------------------eEECCCCEECCCcEEecCCcCC
Q 015225 313 PNVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVLN-------------------SIIGWKSSLGRWARVQGNGDYN 370 (411)
Q Consensus 313 ~~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~~-------------------s~i~~~~~ig~~~~i~~~~~~~ 370 (411)
.++.||+++.|+++|.|. ...||++|.|+.+|.|.+ ++||++|.||.+|.|..+
T Consensus 77 ~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g---- 152 (190)
T 3hjj_A 77 YNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPG---- 152 (190)
T ss_dssp TTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTT----
T ss_pred CceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCC----
Confidence 355555666666666664 456788888888888742 466666666666666665
Q ss_pred cccceeEECCCCEECCCcEEc
Q 015225 371 AKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 371 ~~~~~~~i~~~~~i~~~~~v~ 391 (411)
+.||++|+|+++++|.
T Consensus 153 -----v~IG~~~vIgagsvV~ 168 (190)
T 3hjj_A 153 -----VSIGDNAVIASGAVVT 168 (190)
T ss_dssp -----CEECTTCEECTTCEEC
T ss_pred -----CEECCCCEECCCCEEC
Confidence 6666666666666664
No 129
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.31 E-value=9.4e-12 Score=114.81 Aligned_cols=94 Identities=22% Similarity=0.310 Sum_probs=61.8
Q ss_pred CcEECCCCEECCCCEE--CCCcEECCCcEECCCcEEEeeEECCCCEECCCcEE------------EeeEECCCCEECCCc
Q 015225 296 DVYIHPSAKVHPTAKI--GPNVSISANVRVGAGVRLISCIVLDDVEIKENAVV------------LNSIIGWKSSLGRWA 361 (411)
Q Consensus 296 ~~~i~~~~~v~~~~~i--~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i------------~~s~i~~~~~ig~~~ 361 (411)
++.|++++.|++++.| +.+++||++|+||++|.| +++|+|+.++.. .+++||++|.||++|
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I-----~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga 264 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKL-----YQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNA 264 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSCEE-----ETTCEEECC--------------CCSCEECTTCEECTTC
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCCEE-----CCCCEECCCccccccccccccCCCCCCEECCCcEEcCCC
Confidence 4455555555555555 445666666666655555 444444444411 245899999999999
Q ss_pred EEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEcCC
Q 015225 362 RVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNVS 404 (411)
Q Consensus 362 ~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~~ 404 (411)
.|.++ ++||++|+||+|++|... |.+++++..+
T Consensus 265 ~Il~g---------v~IGd~a~IGagsvV~~d-Vp~~svv~Gn 297 (310)
T 3f1x_A 265 TILGR---------VTIGKGATVGGNIWVTEN-VPAGSRIVQR 297 (310)
T ss_dssp EEESS---------CEECTTCEECSSCEECSC-BCTTCEECCC
T ss_pred EECCC---------cEECCCCEECCCCEECCc-cCCCcEEECC
Confidence 99987 999999999999988643 5677776553
No 130
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.31 E-value=7.9e-12 Score=109.21 Aligned_cols=70 Identities=24% Similarity=0.275 Sum_probs=44.5
Q ss_pred CcEECCCcEECCCcEEE---eeEECCCCEECCCcEEE-------------------eeEECCCCEECCCcEEecCCcCCc
Q 015225 314 NVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVL-------------------NSIIGWKSSLGRWARVQGNGDYNA 371 (411)
Q Consensus 314 ~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~~~~ 371 (411)
++.||++|.|+++|.|. ..+||++|.||.+|.|. .++||++|.||.+|.|..+
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g----- 148 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPG----- 148 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTT-----
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCC-----
Confidence 44555555555555553 24777777777777773 3357777777777777666
Q ss_pred ccceeEECCCCEECCCcEEcc
Q 015225 372 KLGITILGEAVTVEDEVVVIN 392 (411)
Q Consensus 372 ~~~~~~i~~~~~i~~~~~v~~ 392 (411)
+.||++++|+++++|..
T Consensus 149 ----v~IG~~~vIgagsvV~~ 165 (199)
T 3ftt_A 149 ----VTIGEGSVIGAGSVVTK 165 (199)
T ss_dssp ----CEECTTCEECTTCEECS
T ss_pred ----CEECCCCEECCCCEECc
Confidence 77777777777766643
No 131
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.30 E-value=3.5e-12 Score=115.83 Aligned_cols=108 Identities=8% Similarity=0.087 Sum_probs=73.6
Q ss_pred cEECCCCEECCCCEECCCcEECCCcEECCCcEEE-eeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccce
Q 015225 297 VYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLI-SCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGI 375 (411)
Q Consensus 297 ~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~-~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~ 375 (411)
..+++++.|+|.++|++++.||+++.|++++.|+ ++.++.+|.|...+.+ ++.||++|.|+.++.|.+.... ...+.
T Consensus 156 ~vI~~gv~I~P~AvI~~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~i-Gv~IGd~v~IgpGa~IgG~~~~-~~~~~ 233 (332)
T 3fsy_A 156 YVVPTGVRIADADRVRLGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISA-GVVVGDGSDVGGGASIMGTLSG-GGTHV 233 (332)
T ss_dssp TCCCTTCEESCGGGBBTTEEECTTCEECTTCEECTTEEESSCCEECSEECT-TCEECTTCEECTTCEECSBCC----CCB
T ss_pred eecCCCcEECCcCEECCCCEECCCCEEccccEEEECCeECcCCEECCceec-ceEECCCCEECCCCEEcCCCCC-CCccc
Confidence 3456666666666666666666666666666665 4556777777655433 4888888888888888763211 11233
Q ss_pred eEECCCCEECCCcEE-----cceEEcCCCEEcCCCC
Q 015225 376 TILGEAVTVEDEVVV-----INSIVLPNKVLNVSVQ 406 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-----~~~~i~~~~~v~~~~~ 406 (411)
++||++|+||+++.| .+|+|++|++|.++.+
T Consensus 234 V~IGDnv~IGanAtIgVtIGd~~iIGAGSVVtkdt~ 269 (332)
T 3fsy_A 234 ISIGKRCLLGANSGLGISLGDDCVVEAGLYVTAGTR 269 (332)
T ss_dssp CEECTTCEECTTCEECSCBCSSCEECTTCEECTTCE
T ss_pred eEECCCCEECCCCEEeeEECCCCEECCCCEECCCCE
Confidence 788888888888876 5789999999988753
No 132
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.30 E-value=1.6e-11 Score=121.43 Aligned_cols=62 Identities=16% Similarity=0.194 Sum_probs=43.2
Q ss_pred EECCCCEECCCcEEE--------eeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEcCC
Q 015225 333 IVLDDVEIKENAVVL--------NSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNVS 404 (411)
Q Consensus 333 ~i~~~~~i~~~~~i~--------~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~~ 404 (411)
+||++|.||.++.+. .++||++|.||.++.|..+ +.||+++.|++|++|... |.|++++-.+
T Consensus 374 ~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~g---------v~Ig~~~~igagsvV~~~-v~~~~~~~G~ 443 (459)
T 4fce_A 374 EIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAP---------VTVANGATIGAGTTVTRD-VAENELVISR 443 (459)
T ss_dssp EECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESS---------EEECTTCEECTTCEECSC-BCTTCEECCC
T ss_pred EECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCC---------cEECCCCEECCCCEEccc-cCCCCEEEec
Confidence 444455555555543 2677777777777777776 999999999999999554 5777777653
No 133
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.29 E-value=1.6e-11 Score=115.05 Aligned_cols=93 Identities=19% Similarity=0.170 Sum_probs=66.6
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEE----------------------
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVV---------------------- 346 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i---------------------- 346 (411)
.++.+.+++.|++++.|+++|.|. +++|++++.|+++|+|.+++|+++|.|+.++.+
T Consensus 76 ~~~~I~g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~I~~~s~I~~s~I~~~~~I~~~~~i~~~s~I~~~~~~~~~~~~g~~I 154 (334)
T 2pig_A 76 GNARITQPCTLYNNVRIGDNVWID-RADISDGARISDNVTIQSSSVREECAIYGDARVLNQSEILAIQGLTHEHAQILQI 154 (334)
T ss_dssp TTCEEESSCEEESSCEECTTCEEE-SCEEESSCEECTTCEEESCEEESSEEECTTCEEESSCEEEC--------CCCEEE
T ss_pred CCcEEeeeeeECCCcEECCCCEEE-eEEEcCCCEEeCCcEEeccEEcCCeEEecCCEEeCCEEEeecceeecccCCCeEE
Confidence 467778888888888888888888 899999999999999988777666665555544
Q ss_pred ------EeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcc
Q 015225 347 ------LNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVIN 392 (411)
Q Consensus 347 ------~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~ 392 (411)
.+|+|+++|.|+.++.|.+ ++|++++.|++++.+.+
T Consensus 155 ~~~a~I~~s~I~~g~~I~~~a~I~~----------svI~~~a~I~~~a~V~~ 196 (334)
T 2pig_A 155 YDRATVNHSRIVHQVQLYGNATITH----------AFIEHRAEVFDFALIEG 196 (334)
T ss_dssp CTTCEEESCEEETTCEECTTCEEES----------EEECTTCEECTTCEEEC
T ss_pred CCCCEEeccEEcCCCEEcCCeEEeC----------cEEcCCCEECCCcEECC
Confidence 3444445555555555542 77777777777776643
No 134
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.28 E-value=2.3e-11 Score=121.60 Aligned_cols=106 Identities=13% Similarity=0.122 Sum_probs=86.1
Q ss_pred CCcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEe--------eEECCCCEECCC
Q 015225 289 TSATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLN--------SIIGWKSSLGRW 360 (411)
Q Consensus 289 ~~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~--------s~i~~~~~ig~~ 360 (411)
+.+.+++++.+++++.||.++.|. +++||++++|+..+.|.+++||++|.||++|.+-| ++||++|.||.+
T Consensus 345 ~~~~i~~~~~i~~~v~IG~~v~ik-~s~Ig~gskI~~~~~i~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd~~~iG~~ 423 (501)
T 3st8_A 345 PFTYLRPGTALGADGKLGAFVEVK-NSTIGTGTKVPHLTYVGDADIGEYSNIGASSVFVNYDGTSKRRTTVGSHVRTGSD 423 (501)
T ss_dssp SSEEECTTCEECTTCEEEETEEEE-SCEECTTCEEEESCEEESEEECSSCEECTTCEEECBCSSSBCCEEECTTCEECTT
T ss_pred CceeecCCcEEccccccCCeEEEc-cceecCCcEEeccceecCceEcCCCEECCCEEEEcccCCcccCCEECCCcEECCC
Confidence 345555566666666666666665 78999999999999999999999999999999854 899999999999
Q ss_pred cEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEEcCCC
Q 015225 361 ARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVLNVSV 405 (411)
Q Consensus 361 ~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~~~~ 405 (411)
+.|..+ +.||++|.|++|++|... |.|++.+-...
T Consensus 424 ~~l~~~---------v~Ig~~~~i~ags~v~~d-vp~~~l~~~~~ 458 (501)
T 3st8_A 424 TMFVAP---------VTIGDGAYTGAGTVVRED-VPPGALAVSAG 458 (501)
T ss_dssp CEEESS---------EEECTTCEECTTCEECSC-BCTTCEECCCC
T ss_pred CEEcCC---------cEECCCCEECCCCEECcc-cCCCCeEEecc
Confidence 999998 999999999999999554 46676554443
No 135
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.27 E-value=3.1e-11 Score=109.89 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=39.4
Q ss_pred CcEEcCCcEECCCCEEC--CCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEE---eeEECCCCEECCCcEEe
Q 015225 290 SATIAGDVYIHPSAKVH--PTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVL---NSIIGWKSSLGRWARVQ 364 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~--~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~---~s~i~~~~~ig~~~~i~ 364 (411)
+..+++++.||++++|+ .+++|+++++||++|.|+++++|.. ..... +++||++|.||+++.|.
T Consensus 164 gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~-----------~~~~~~~r~~~IGd~v~IGaga~Il 232 (287)
T 3mc4_A 164 QTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGG-----------TGKSSGDRHPKIRQGVLIGAGAKIL 232 (287)
T ss_dssp CCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC----------------CCCSCEECTTCEECTTCEEE
T ss_pred CeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcC-----------CcccCCCcCCEECCCCEECCCCEEC
Confidence 34455555555555554 3444444444444444444444432 11111 24555566666665555
Q ss_pred cCCcCCcccceeEECCCCEECCCcEE
Q 015225 365 GNGDYNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~i~~~~~v 390 (411)
++ ++||++|+||+|++|
T Consensus 233 ~g---------v~IG~~a~IGagsvV 249 (287)
T 3mc4_A 233 GN---------IQVGQCSKIAAGSVV 249 (287)
T ss_dssp SS---------CEECTTCEECTTCEE
T ss_pred CC---------cEECCCCEECCCCEE
Confidence 55 555555555555555
No 136
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.27 E-value=2.5e-11 Score=104.98 Aligned_cols=71 Identities=17% Similarity=0.203 Sum_probs=49.1
Q ss_pred CCcEECCCcEECCCcEEEe---eEECCCCEECCCcEEE-------------------eeEECCCCEECCCcEEecCCcCC
Q 015225 313 PNVSISANVRVGAGVRLIS---CIVLDDVEIKENAVVL-------------------NSIIGWKSSLGRWARVQGNGDYN 370 (411)
Q Consensus 313 ~~~~ig~~~~i~~~~~i~~---~~i~~~~~i~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~~~ 370 (411)
.++.||+++.|+.+|.|.+ .+||++|.|+.+|+|. .++||++|.||.+|.|..+
T Consensus 75 ~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g---- 150 (188)
T 3srt_A 75 YNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPG---- 150 (188)
T ss_dssp TTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTT----
T ss_pred CCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCC----
Confidence 3566666666666666653 3788888888888882 4667777777777777666
Q ss_pred cccceeEECCCCEECCCcEEcc
Q 015225 371 AKLGITILGEAVTVEDEVVVIN 392 (411)
Q Consensus 371 ~~~~~~~i~~~~~i~~~~~v~~ 392 (411)
+.||++++|+++++|..
T Consensus 151 -----v~IG~~~vIgagsvV~~ 167 (188)
T 3srt_A 151 -----ITIGDNVVIGAGSVVTK 167 (188)
T ss_dssp -----CEECSSEEECTTCEECS
T ss_pred -----cEECCCCEECCCCEECc
Confidence 67777777776666643
No 137
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.26 E-value=1.4e-11 Score=106.12 Aligned_cols=79 Identities=18% Similarity=0.247 Sum_probs=50.3
Q ss_pred CcEECCCcEECCCcEE---EeeEECCCCEECCCcEEE-------------------eeEECCCCEECCCcEEecCCcCCc
Q 015225 314 NVSISANVRVGAGVRL---ISCIVLDDVEIKENAVVL-------------------NSIIGWKSSLGRWARVQGNGDYNA 371 (411)
Q Consensus 314 ~~~ig~~~~i~~~~~i---~~~~i~~~~~i~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~~~~ 371 (411)
++.||+++.|+.+|+| .+.+||++|.|+.+|.|. .++||++|.||.+|.|..+
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~g----- 148 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPG----- 148 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTT-----
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCC-----
Confidence 4444444444444444 245666666666666663 4677888888888877776
Q ss_pred ccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 372 KLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 372 ~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
+.||++++|++|++|... |.+++++-
T Consensus 149 ----v~IG~~~vIgagsvV~~~-vp~~~vv~ 174 (185)
T 2p2o_A 149 ----VTIGDNAVIASGAVVTKD-VPANAVVG 174 (185)
T ss_dssp ----CEECTTCEECTTCEECSC-BCTTEEEE
T ss_pred ----CEECCCCEECCCCEECCC-CCCCcEEE
Confidence 788888888877777544 55555544
No 138
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.25 E-value=2.1e-11 Score=104.66 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=54.5
Q ss_pred CCcEECCCcEECCCcEEE---eeEECCCCEECCCcEEE-------------------eeEECCCCEECCCcEEecCCcCC
Q 015225 313 PNVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVL-------------------NSIIGWKSSLGRWARVQGNGDYN 370 (411)
Q Consensus 313 ~~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~~~ 370 (411)
.++.||+++.|+.+|.|. ..+||++|.|+.+|.|. .++||++|.||.++.|..+
T Consensus 71 ~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~g---- 146 (182)
T 1ocx_A 71 YNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPG---- 146 (182)
T ss_dssp TTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTT----
T ss_pred CCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCC----
Confidence 345555555555555553 45777777777777773 4678888888888887777
Q ss_pred cccceeEECCCCEECCCcEEcceEEcCCCEEc
Q 015225 371 AKLGITILGEAVTVEDEVVVINSIVLPNKVLN 402 (411)
Q Consensus 371 ~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v~ 402 (411)
+.||++++|++|++|... |.+++++-
T Consensus 147 -----v~IG~~~vIgagsvV~~d-ip~~~vv~ 172 (182)
T 1ocx_A 147 -----VTIGDNVVVASGAVVTKD-VPDNVVVG 172 (182)
T ss_dssp -----CEECTTCEECTTCEECSC-BCSSEEEE
T ss_pred -----cEECCCCEECCCCEECCc-CCCCcEEE
Confidence 788888888887777544 55665554
No 139
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.25 E-value=2.7e-11 Score=110.32 Aligned_cols=78 Identities=23% Similarity=0.227 Sum_probs=44.5
Q ss_pred CCcEEcCCcEEC--CCCEECCCCEECCCcEECCCcEECCCcEEE---eeEECCCCEECCCcEEE-eeEECCCCEECCCcE
Q 015225 289 TSATIAGDVYIH--PSAKVHPTAKIGPNVSISANVRVGAGVRLI---SCIVLDDVEIKENAVVL-NSIIGWKSSLGRWAR 362 (411)
Q Consensus 289 ~~~~~~~~~~i~--~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~ 362 (411)
+++.|+++++|+ .+++|+++|+|+.++.|+.+|.|+...... +++||++|.||.+++|. +++||++|.||+++.
T Consensus 169 p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~~a~IGagsv 248 (287)
T 3mc4_A 169 PAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQCSKIAAGSV 248 (287)
T ss_dssp TTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECTTCEECTTCE
T ss_pred CCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECCCCEECCCCE
Confidence 355666666665 556666666666666666666665543222 25556666666666666 566666666666666
Q ss_pred EecC
Q 015225 363 VQGN 366 (411)
Q Consensus 363 i~~~ 366 (411)
|..+
T Consensus 249 V~kd 252 (287)
T 3mc4_A 249 VLKS 252 (287)
T ss_dssp ECSC
T ss_pred Eccc
Confidence 6553
No 140
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=99.24 E-value=1.3e-11 Score=116.33 Aligned_cols=138 Identities=18% Similarity=0.136 Sum_probs=75.1
Q ss_pred EEeecceeeecCC--ccchhhcchHHHhhhh--hc-----CccccccCCCCCCcEEcCCcEECCCCEECCCCEECCC-cE
Q 015225 247 TYETMDFWEQIKT--PGMSLKCSSLYLALFK--IT-----SPQLLASGNGITSATIAGDVYIHPSAKVHPTAKIGPN-VS 316 (411)
Q Consensus 247 ~~~~~~~~~~I~t--~~d~~~a~~~~l~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~i~~~-~~ 316 (411)
.+....+|.+.+. |.+|......+..+.. .. .|..........+.++.+++.|++++.|+++++|+++ ++
T Consensus 165 g~l~~~~Wt~~G~~~~~~f~~~~~~l~~~G~~~~~~~~dk~p~~~~~v~p~~gv~I~p~a~I~~~a~IG~gv~Ig~g~a~ 244 (387)
T 2rij_A 165 GLLSNVAWSDDKPIELEYLRANEMRLKMSNQYPKIDFVDKFPRFLAHIIPEDNTRILESSKVRMGASLAAGTTIMPGASY 244 (387)
T ss_dssp HHSCCEEEETTEEECHHHHHHHHHHHHHTTCCCCCCEEESSCBGGGTCCCCTTCEESCGGGBBTTCBCCTTCEECSSSCE
T ss_pred ccCceeeeccCcccCHHHHHHHHHHHHhcCCccceeecccccchhccccCCCCEEEcCCCEECCCeEEcCCCEEeCCeeE
Confidence 3344567888777 5566666555543221 00 1111110001125666666677777777777777764 77
Q ss_pred ECCCcE-ECCCcEEE-----eeEECCCCEECCCcEEEe---------eEECCCCEECCCcEEecCCcCCcccceeEECCC
Q 015225 317 ISANVR-VGAGVRLI-----SCIVLDDVEIKENAVVLN---------SIIGWKSSLGRWARVQGNGDYNAKLGITILGEA 381 (411)
Q Consensus 317 ig~~~~-i~~~~~i~-----~~~i~~~~~i~~~~~i~~---------s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~ 381 (411)
|+.++. ||+ |.|. +++||++|.|+.++.|.+ ++||++|.||.++. .+ +.||++
T Consensus 245 Ig~nv~vIG~-~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~G---------V~IGdg 312 (387)
T 2rij_A 245 VNFNAGTTGA-CMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--TG---------IPLGDN 312 (387)
T ss_dssp ECTTCEESSC-CEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--EC---------SCBCTT
T ss_pred ECCCcEEECC-EEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--CC---------cEECCC
Confidence 777776 666 6653 344555555555554221 45666666666655 22 666666
Q ss_pred CEECCCcEE-cceEEc
Q 015225 382 VTVEDEVVV-INSIVL 396 (411)
Q Consensus 382 ~~i~~~~~v-~~~~i~ 396 (411)
|+|++|++| +++.++
T Consensus 313 avIGAGsVVt~dv~i~ 328 (387)
T 2rij_A 313 CIVDAGIAVLEGTKFL 328 (387)
T ss_dssp CEECTTCEECTTCEEE
T ss_pred CEECCCCEECCCceee
Confidence 666666666 344443
No 141
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.24 E-value=2.4e-11 Score=105.76 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=49.4
Q ss_pred cEEcCCcEECCCCEECCCCEEC--CCcEECCCcEECCCcEEEe-------------------eEECCCCEECCCcEEE-e
Q 015225 291 ATIAGDVYIHPSAKVHPTAKIG--PNVSISANVRVGAGVRLIS-------------------CIVLDDVEIKENAVVL-N 348 (411)
Q Consensus 291 ~~~~~~~~i~~~~~v~~~~~i~--~~~~ig~~~~i~~~~~i~~-------------------~~i~~~~~i~~~~~i~-~ 348 (411)
+.++.++.||+++.|+++|+|. ..+.||++|.||++|.|.+ ++||++|.||.+|+|. +
T Consensus 71 ~~ig~~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~g 150 (195)
T 3nz2_A 71 CEFGKTIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQG 150 (195)
T ss_dssp ESCSTTEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTT
T ss_pred EEeCCCeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCC
Confidence 3445567788888888888884 4568899999999888864 3566666666666554 4
Q ss_pred eEECCCCEECCCcEEec
Q 015225 349 SIIGWKSSLGRWARVQG 365 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~ 365 (411)
++||++++||+++.+..
T Consensus 151 v~IG~~~vIgagsvV~~ 167 (195)
T 3nz2_A 151 VTIGARSVVAANSVVNQ 167 (195)
T ss_dssp CEECTTCEECTTCEECS
T ss_pred CEECCCCEECCCCEEcc
Confidence 55555555555555444
No 142
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.23 E-value=5e-11 Score=103.94 Aligned_cols=78 Identities=19% Similarity=0.312 Sum_probs=47.6
Q ss_pred CCcEECCCcEECCCcEEEe---eEECCCCEECCCcEEE-------------------eeEECCCCEECCCcEEecCCcCC
Q 015225 313 PNVSISANVRVGAGVRLIS---CIVLDDVEIKENAVVL-------------------NSIIGWKSSLGRWARVQGNGDYN 370 (411)
Q Consensus 313 ~~~~ig~~~~i~~~~~i~~---~~i~~~~~i~~~~~i~-------------------~s~i~~~~~ig~~~~i~~~~~~~ 370 (411)
.++.||+++.|+.+|.|.+ .+||++|.|+.+|.|. .++||++|.||.+|.|..+
T Consensus 74 ~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~g---- 149 (203)
T 1krr_A 74 SNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPG---- 149 (203)
T ss_dssp TTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTT----
T ss_pred CCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCC----
Confidence 4455555555555555543 5666666666666654 3567777777777777766
Q ss_pred cccceeEECCCCEECCCcEEcceEEcCCCE
Q 015225 371 AKLGITILGEAVTVEDEVVVINSIVLPNKV 400 (411)
Q Consensus 371 ~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~ 400 (411)
+.||++|+|++|++|... |.++++
T Consensus 150 -----v~IG~~~vIgagsvV~~d-vp~~~v 173 (203)
T 1krr_A 150 -----VTIGDNSVIGAGSIVTKD-IPPNVV 173 (203)
T ss_dssp -----CEECTTCEECTTCEECSC-BCTTEE
T ss_pred -----eEECCCCEECCCCEECCC-cCCCcE
Confidence 777777777777766433 344443
No 143
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.22 E-value=6.2e-11 Score=109.63 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=54.4
Q ss_pred EcCCcEECCCCEECCCCEE--CCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCC----cEEecC
Q 015225 293 IAGDVYIHPSAKVHPTAKI--GPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRW----ARVQGN 366 (411)
Q Consensus 293 ~~~~~~i~~~~~v~~~~~i--~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~----~~i~~~ 366 (411)
...++.|++++.|++++.| +.+++||++|+||++|.| +++|+||.+ +.+++++.++.+ +.|+++
T Consensus 160 ~~~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I-----~~~vtIG~~-----~~ig~~~~i~~~~~~~~~IGd~ 229 (313)
T 3q1x_A 160 SYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRI-----YQSVTLGAM-----HFQEEGGVIKRGTKRHPTVGDY 229 (313)
T ss_dssp HHHCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEE-----CTTCEEECC-----CCCCTTCCCCCCSSCSCEECSS
T ss_pred ecCCeEECCCCEECCCEEECCCCceEECCCcEECCCCEE-----CCCcEEeCC-----cEECCCceEcCCCccCCEECCC
Confidence 3456677777777777766 344555555555555554 222222222 233333333333 244444
Q ss_pred CcCCcccceeEECCCCEECCCcEE-cceEEcCCCEEcCCCCCcc
Q 015225 367 GDYNAKLGITILGEAVTVEDEVVV-INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 367 ~~~~~~~~~~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~~~~~~ 409 (411)
|.||.+|+|..+++| .+|+||+|++|.+++|+..
T Consensus 230 ---------v~IGaga~Ilggv~IG~~a~IGagsvV~~dVp~gs 264 (313)
T 3q1x_A 230 ---------VTIGTGAKVLGNIIVGSHVRIGANCWIDRDVDSNQ 264 (313)
T ss_dssp ---------CEECTTCEEESSCEECSSEEECTTCEECSCBCSSE
T ss_pred ---------CEECCCCEECCCcEECCCCEECCCCEECCCcCCCC
Confidence 555555555555555 5788888888888887654
No 144
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.22 E-value=1.4e-10 Score=104.91 Aligned_cols=28 Identities=7% Similarity=0.004 Sum_probs=24.0
Q ss_pred CCeEE--EEcCCcccCCChHHHHHHHHhcC
Q 015225 108 PSHII--LLNCDVCCSFPLPDLLEAHKRYG 135 (411)
Q Consensus 108 ~~~~l--v~~~D~i~~~~l~~~l~~~~~~~ 135 (411)
.+++| ++++|.+...+|.+.+.+|...+
T Consensus 19 ~EP~L~~~l~~~IL~~~~l~~aLa~~la~k 48 (267)
T 1ssq_A 19 NEPMLASFFHSTILKHQNLGGALSYLLANK 48 (267)
T ss_dssp HCHHHHHHHHHHTTTSSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 48888 88999999999999999987654
No 145
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.21 E-value=4e-11 Score=106.44 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=57.4
Q ss_pred EEcCCcEECCCCEECCCCEEC-CCcEECCCcEECCCcEEEe-eEECCCCEECCCcEE-----------------------
Q 015225 292 TIAGDVYIHPSAKVHPTAKIG-PNVSISANVRVGAGVRLIS-CIVLDDVEIKENAVV----------------------- 346 (411)
Q Consensus 292 ~~~~~~~i~~~~~v~~~~~i~-~~~~ig~~~~i~~~~~i~~-~~i~~~~~i~~~~~i----------------------- 346 (411)
...+++.+++++.||+++.|. .+..+.++|+|++++.|.+ ++||++|.|+.++++
T Consensus 25 ~~~~~~v~~~~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~ 104 (220)
T 4hur_A 25 QFIKPTITNENILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGW 104 (220)
T ss_dssp EESGGGCCSTTEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTG
T ss_pred EEecceEECCCEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccc
Confidence 334455555555565555551 1222223444444444432 445666666666664
Q ss_pred -------------EeeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEE
Q 015225 347 -------------LNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 347 -------------~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
.+++||++|.||.+|.|..+ +.||++|.|+++++|... |.+++++
T Consensus 105 ~~~~~~~~~~~~~g~v~IG~~v~IG~~a~I~~g---------v~IG~gavIgagsvV~~d-Vp~~~vv 162 (220)
T 4hur_A 105 EKYMPSLKDLPLKGDIEIGNDVWIGRDVTIMPG---------VKIGDGAIIAAEAVVTKN-VAPYSIV 162 (220)
T ss_dssp GGGCCCGGGSCCCCCEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred cccccccccccccCCeEECCCcEECCCCEEeCC---------CEECCCCEEcCCCEEccc-CCCCcEE
Confidence 24678888888888887777 777888877777777433 3444443
No 146
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.20 E-value=9.4e-11 Score=108.15 Aligned_cols=77 Identities=29% Similarity=0.310 Sum_probs=62.0
Q ss_pred CcEEcCCcEECCCCEE--CCCCEECCCcEECCCcEECCCcEEEe-e-----------------EECCCCEECCCcEEE-e
Q 015225 290 SATIAGDVYIHPSAKV--HPTAKIGPNVSISANVRVGAGVRLIS-C-----------------IVLDDVEIKENAVVL-N 348 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v--~~~~~i~~~~~ig~~~~i~~~~~i~~-~-----------------~i~~~~~i~~~~~i~-~ 348 (411)
+..+++++.||++++| +.+++|+++++||++|.|+++|+|.. + +||++|.||.+|+|. +
T Consensus 190 gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~g 269 (310)
T 3f1x_A 190 GIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILGR 269 (310)
T ss_dssp SCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEESS
T ss_pred CcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECCC
Confidence 5677888888888888 67888888888888888888888873 3 688888888888888 7
Q ss_pred eEECCCCEECCCcEEecC
Q 015225 349 SIIGWKSSLGRWARVQGN 366 (411)
Q Consensus 349 s~i~~~~~ig~~~~i~~~ 366 (411)
++||++|.||+++.|..+
T Consensus 270 v~IGd~a~IGagsvV~~d 287 (310)
T 3f1x_A 270 VTIGKGATVGGNIWVTEN 287 (310)
T ss_dssp CEECTTCEECSSCEECSC
T ss_pred cEECCCCEECCCCEECCc
Confidence 888888888888777764
No 147
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.20 E-value=1.3e-10 Score=105.02 Aligned_cols=76 Identities=22% Similarity=0.191 Sum_probs=38.1
Q ss_pred CcEEcCCcEECCCCEECC--CCEECCCcEECCCcEECCCcEEEe---------eEECCCCEECCCcEEE-eeEECCCCEE
Q 015225 290 SATIAGDVYIHPSAKVHP--TAKIGPNVSISANVRVGAGVRLIS---------CIVLDDVEIKENAVVL-NSIIGWKSSL 357 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~--~~~i~~~~~ig~~~~i~~~~~i~~---------~~i~~~~~i~~~~~i~-~s~i~~~~~i 357 (411)
+..+++++.||++++|++ +++|+++++||++|.|+++++|.+ ++||++|.||.+++|. +++||+++.|
T Consensus 137 g~~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~a~I 216 (267)
T 1ssq_A 137 DVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKYAKI 216 (267)
T ss_dssp SCEECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTTCEE
T ss_pred ceEeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCCCEE
Confidence 445566666666666663 455555555555555555555543 2444444444444443 3444444444
Q ss_pred CCCcEEec
Q 015225 358 GRWARVQG 365 (411)
Q Consensus 358 g~~~~i~~ 365 (411)
|+++.|..
T Consensus 217 GagsvV~~ 224 (267)
T 1ssq_A 217 GANSVVLN 224 (267)
T ss_dssp CTTCEECS
T ss_pred CCCCEEcc
Confidence 44444433
No 148
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.20 E-value=2e-10 Score=104.77 Aligned_cols=28 Identities=7% Similarity=-0.060 Sum_probs=24.4
Q ss_pred CCeEE--EEcCCcccCCChHHHHHHHHhcC
Q 015225 108 PSHII--LLNCDVCCSFPLPDLLEAHKRYG 135 (411)
Q Consensus 108 ~~~~l--v~~~D~i~~~~l~~~l~~~~~~~ 135 (411)
.+++| ++++|.+...+|.+.+.+|...+
T Consensus 39 ~EP~L~~~l~~~IL~~~~l~~aLa~~La~k 68 (289)
T 1t3d_A 39 CEPMLASFYHATLLKHENLGSALSYMLANK 68 (289)
T ss_dssp HCGGGHHHHHHHTTTCSSHHHHHHHHHHHH
T ss_pred cCCHHHHHhcccccCCCCHHHHHHHHHhcc
Confidence 58899 99999999999999999987654
No 149
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=99.19 E-value=4.2e-11 Score=118.23 Aligned_cols=89 Identities=19% Similarity=0.272 Sum_probs=74.0
Q ss_pred CcEEcCCcEECCCCEECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCC---------------
Q 015225 290 SATIAGDVYIHPSAKVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWK--------------- 354 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~--------------- 354 (411)
.+.+.+.+.|++++.| +++.| .+++||++|+|+. |.|.+++||++|.||++|.|.++++..+
T Consensus 308 ~~~i~~~~~i~~~~~i-~~~~I-~~~~Ig~~~~I~~-~~i~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~ 384 (451)
T 1yp2_A 308 SAPIYTQPRYLPPSKM-LDADV-TDSVIGEGCVIKN-CKIHHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAK 384 (451)
T ss_dssp SSCCCCCCCCCCCEEE-EEEEE-EEEEECTTCEEEE-EEEESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTT
T ss_pred CCeeccCCccCCCeEE-cceEE-eCeEECCCCEEcc-eEEeccEECCCCEECCCCEEcCceEECCCCccccccccccccc
Confidence 3445556666666666 56777 4688999999986 8888999999999999999998877777
Q ss_pred ----CEECCCcEEecCCcCCcccceeEECCCCEECCCcEEc
Q 015225 355 ----SSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVI 391 (411)
Q Consensus 355 ----~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~ 391 (411)
+.||+++.+.+ ++||++|+||++++|.
T Consensus 385 g~~~~~Ig~~~~i~~----------~~Ig~~~~IG~~~~i~ 415 (451)
T 1yp2_A 385 GSVPIGIGKNCHIKR----------AIIDKNARIGDNVKII 415 (451)
T ss_dssp TCCCSEECTTCEEES----------EEECTTCEECTTCEEC
T ss_pred CceeEEECCCCEEec----------cEeCCCcEECCCCEEe
Confidence 99999999977 8999999999999884
No 150
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.17 E-value=2.3e-10 Score=104.32 Aligned_cols=81 Identities=19% Similarity=0.171 Sum_probs=42.4
Q ss_pred CcEEcCCcEECCCCEECC--CCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcE---EEeeEECCCCEECCCcEEe
Q 015225 290 SATIAGDVYIHPSAKVHP--TAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAV---VLNSIIGWKSSLGRWARVQ 364 (411)
Q Consensus 290 ~~~~~~~~~i~~~~~v~~--~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~---i~~s~i~~~~~ig~~~~i~ 364 (411)
+..+++++.||++++|++ +++|+++++||++|.|+++++|.+ ... ..+++||++|.||.++.|.
T Consensus 157 g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~-----------~~~~~~~~~~~IGd~v~IGaga~Il 225 (289)
T 1t3d_A 157 QVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGG-----------TGKSGGDRHPKIREGVMIGAGAKIL 225 (289)
T ss_dssp SCEECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEEC-----------CSSSCSSCSCEECTTCEECTTCEEE
T ss_pred ceEEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECC-----------CccccCCCCeEECCCeEECCCCEEe
Confidence 344555555555555553 344444444444444444444432 110 1135666666666666666
Q ss_pred cCCcCCcccceeEECCCCEECCCcEE
Q 015225 365 GNGDYNAKLGITILGEAVTVEDEVVV 390 (411)
Q Consensus 365 ~~~~~~~~~~~~~i~~~~~i~~~~~v 390 (411)
++ +.||++++||+|++|
T Consensus 226 gg---------v~IG~~a~IGagsvV 242 (289)
T 1t3d_A 226 GN---------IEVGRGAKIGAGSVV 242 (289)
T ss_dssp SS---------CEECTTCEECTTCEE
T ss_pred cC---------cEECCCCEECCCCEE
Confidence 65 666666666666666
No 151
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.14 E-value=3.7e-10 Score=97.79 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=54.4
Q ss_pred cCCcEECCCCEECCCCEECC--CcEECCCcEECCCcEEEe-------------------eEECCCCEECCCcEEE-eeEE
Q 015225 294 AGDVYIHPSAKVHPTAKIGP--NVSISANVRVGAGVRLIS-------------------CIVLDDVEIKENAVVL-NSII 351 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~~--~~~ig~~~~i~~~~~i~~-------------------~~i~~~~~i~~~~~i~-~s~i 351 (411)
+.++.||++++|+++|+|.. ++.||++|.||++|.|.+ ++||++|.||.+|+|. +++|
T Consensus 76 g~~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~I 155 (190)
T 3hjj_A 76 GYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSI 155 (190)
T ss_dssp STTEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEE
Confidence 55778888888888888874 678999999999999943 4677777777777766 6666
Q ss_pred CCCCEECCCcEEec
Q 015225 352 GWKSSLGRWARVQG 365 (411)
Q Consensus 352 ~~~~~ig~~~~i~~ 365 (411)
|++|+||+++.+..
T Consensus 156 G~~~vIgagsvV~~ 169 (190)
T 3hjj_A 156 GDNAVIASGAVVTK 169 (190)
T ss_dssp CTTCEECTTCEECS
T ss_pred CCCCEECCCCEECc
Confidence 66666666666655
No 152
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.13 E-value=5.9e-10 Score=97.23 Aligned_cols=73 Identities=18% Similarity=0.180 Sum_probs=54.5
Q ss_pred cCCcEECCCCEECCCCEEC--CCcEECCCcEECCCcEEE-------------------eeEECCCCEECCCcEEE-eeEE
Q 015225 294 AGDVYIHPSAKVHPTAKIG--PNVSISANVRVGAGVRLI-------------------SCIVLDDVEIKENAVVL-NSII 351 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~--~~~~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~s~i 351 (411)
+.++.||+++.|+++|+|. +.+.||++|.||++|.|. +++||++|.||.+|+|. +++|
T Consensus 72 g~~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~I 151 (199)
T 3ftt_A 72 GWNVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTI 151 (199)
T ss_dssp STTEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEE
T ss_pred cCCcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEE
Confidence 5677888888888888884 458999999999999994 34677777777777766 6666
Q ss_pred CCCCEECCCcEEecC
Q 015225 352 GWKSSLGRWARVQGN 366 (411)
Q Consensus 352 ~~~~~ig~~~~i~~~ 366 (411)
|+++.||+++.|..+
T Consensus 152 G~~~vIgagsvV~~d 166 (199)
T 3ftt_A 152 GEGSVIGAGSVVTKD 166 (199)
T ss_dssp CTTCEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 666666666666553
No 153
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.10 E-value=3.7e-10 Score=97.58 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=54.6
Q ss_pred cCCcEECCCCEECCCCEECC--CcEECCCcEECCCcEE-------------------EeeEECCCCEECCCcEEE-eeEE
Q 015225 294 AGDVYIHPSAKVHPTAKIGP--NVSISANVRVGAGVRL-------------------ISCIVLDDVEIKENAVVL-NSII 351 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~~--~~~ig~~~~i~~~~~i-------------------~~~~i~~~~~i~~~~~i~-~s~i 351 (411)
+.++.||+++.|+++|+|.. .+.||++|.||++|.| .+++||++|.||.+|+|. +++|
T Consensus 74 g~~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~I 153 (188)
T 3srt_A 74 GYNIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITI 153 (188)
T ss_dssp STTEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEE
T ss_pred CCCeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEE
Confidence 34677888888888888864 5589999999999999 356777777777777776 6666
Q ss_pred CCCCEECCCcEEecC
Q 015225 352 GWKSSLGRWARVQGN 366 (411)
Q Consensus 352 ~~~~~ig~~~~i~~~ 366 (411)
|++++||+++.|..+
T Consensus 154 G~~~vIgagsvV~~d 168 (188)
T 3srt_A 154 GDNVVIGAGSVVTKD 168 (188)
T ss_dssp CSSEEECTTCEECSC
T ss_pred CCCCEECCCCEECcc
Confidence 766666666666653
No 154
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.08 E-value=3.9e-10 Score=98.27 Aligned_cols=72 Identities=22% Similarity=0.200 Sum_probs=47.5
Q ss_pred cCCcEECCCCEECCCCEECC--CcEECCCcEECCCcEEEe-------------------eEECCCCEECCCcEEE-eeEE
Q 015225 294 AGDVYIHPSAKVHPTAKIGP--NVSISANVRVGAGVRLIS-------------------CIVLDDVEIKENAVVL-NSII 351 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~~--~~~ig~~~~i~~~~~i~~-------------------~~i~~~~~i~~~~~i~-~s~i 351 (411)
+.++.||+++.|+++|+|.. .+.||++|.||++|.|.. ++||++|.||.+|+|. +++|
T Consensus 73 g~~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~I 152 (203)
T 1krr_A 73 GSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTI 152 (203)
T ss_dssp STTEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEE
Confidence 55677788888877777763 478999999999998852 4566666666655554 4555
Q ss_pred CCCCEECCCcEEec
Q 015225 352 GWKSSLGRWARVQG 365 (411)
Q Consensus 352 ~~~~~ig~~~~i~~ 365 (411)
|++++||+++.|..
T Consensus 153 G~~~vIgagsvV~~ 166 (203)
T 1krr_A 153 GDNSVIGAGSIVTK 166 (203)
T ss_dssp CTTCEECTTCEECS
T ss_pred CCCCEECCCCEECC
Confidence 55555555544443
No 155
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.07 E-value=9.1e-10 Score=94.43 Aligned_cols=72 Identities=17% Similarity=0.148 Sum_probs=53.6
Q ss_pred cCCcEECCCCEECCCCEEC--CCcEECCCcEECCCcEEE-------------------eeEECCCCEECCCcEEE-eeEE
Q 015225 294 AGDVYIHPSAKVHPTAKIG--PNVSISANVRVGAGVRLI-------------------SCIVLDDVEIKENAVVL-NSII 351 (411)
Q Consensus 294 ~~~~~i~~~~~v~~~~~i~--~~~~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~s~i 351 (411)
..++.||+++.|+++++|. +++.||++|.|+++|.|. +++||++|.||.+|+|. +++|
T Consensus 70 g~~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~I 149 (182)
T 1ocx_A 70 GYNIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTI 149 (182)
T ss_dssp STTEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEE
T ss_pred CCCEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEE
Confidence 4567788888888888884 578999999999999994 46777777777777765 5666
Q ss_pred CCCCEECCCcEEec
Q 015225 352 GWKSSLGRWARVQG 365 (411)
Q Consensus 352 ~~~~~ig~~~~i~~ 365 (411)
|++++||+++.|..
T Consensus 150 G~~~vIgagsvV~~ 163 (182)
T 1ocx_A 150 GDNVVVASGAVVTK 163 (182)
T ss_dssp CTTCEECTTCEECS
T ss_pred CCCCEECCCCEECC
Confidence 66666666655554
No 156
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.07 E-value=5.1e-10 Score=96.34 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=55.6
Q ss_pred EcCCcEECCCCEECCCCEEC--CCcEECCCcEECCCcEEE-------------------eeEECCCCEECCCcEEE-eeE
Q 015225 293 IAGDVYIHPSAKVHPTAKIG--PNVSISANVRVGAGVRLI-------------------SCIVLDDVEIKENAVVL-NSI 350 (411)
Q Consensus 293 ~~~~~~i~~~~~v~~~~~i~--~~~~ig~~~~i~~~~~i~-------------------~~~i~~~~~i~~~~~i~-~s~ 350 (411)
+..++.||+++.|.++++|. +++.||++|.|+++|.|. +++||++|.||.+|+|. +++
T Consensus 71 ~g~~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~ 150 (185)
T 2p2o_A 71 YGYNIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVT 150 (185)
T ss_dssp CSTTEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCE
T ss_pred ecCCEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCE
Confidence 45677888888888888884 578999999999999994 46777777777777766 566
Q ss_pred ECCCCEECCCcEEec
Q 015225 351 IGWKSSLGRWARVQG 365 (411)
Q Consensus 351 i~~~~~ig~~~~i~~ 365 (411)
||++++||+++.|..
T Consensus 151 IG~~~vIgagsvV~~ 165 (185)
T 2p2o_A 151 IGDNAVIASGAVVTK 165 (185)
T ss_dssp ECTTCEECTTCEECS
T ss_pred ECCCCEECCCCEECC
Confidence 666666666655554
No 157
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.05 E-value=3.2e-10 Score=100.64 Aligned_cols=32 Identities=19% Similarity=0.312 Sum_probs=15.7
Q ss_pred eEECCCCEECCCcEE-------cceEEcCCCEEcCCCCC
Q 015225 376 TILGEAVTVEDEVVV-------INSIVLPNKVLNVSVQE 407 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-------~~~~i~~~~~v~~~~~~ 407 (411)
++||++|+||.+++| .+|+|++|++|.+++|+
T Consensus 120 v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~ 158 (220)
T 4hur_A 120 IEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAP 158 (220)
T ss_dssp EEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCT
T ss_pred eEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccCCC
Confidence 444444444444433 34555555555555544
No 158
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=98.98 E-value=1.4e-09 Score=106.13 Aligned_cols=89 Identities=15% Similarity=0.167 Sum_probs=66.7
Q ss_pred EECCCCEECCCcEECCCcEECCCcEEEeeEECCCCEECCCcEEEeeEECCCCEECCCcEEecCCcCCcccceeEECCCCE
Q 015225 304 KVHPTAKIGPNVSISANVRVGAGVRLISCIVLDDVEIKENAVVLNSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVT 383 (411)
Q Consensus 304 ~v~~~~~i~~~~~ig~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~ 383 (411)
.+..++.+.+++.++++. ++.++.+.++.||++|+| +++.|.+|+||++|.||++|.|.+ |+|++++.
T Consensus 298 ~i~~~~~i~~~~~i~~~~-~~~~~~i~~~~ig~~~~I-~~~~i~~~~ig~~~~I~~~~~i~~----------~~i~~~~~ 365 (420)
T 3brk_X 298 PIWTYAEITPPAKFVHDD-EDRRGSAVSSVVSGDCII-SGAALNRSLLFTGVRANSYSRLEN----------AVVLPSVK 365 (420)
T ss_dssp CCCCCCCCCCCCEEECBC-SSCBCEEESCEECSSCEE-ESCEEESCEECTTCEECTTCEEEE----------EEECTTCE
T ss_pred ceeeccccCCCcEEeccc-ccCCcEecCCEECCCCEE-cCCEEeCcEEcCCCEECCCCEEcc----------eEEcCCCE
Confidence 333334444444444331 344888889999999999 899999999999999999999987 99999999
Q ss_pred ECCCcEEcceEEcCCCEEcCC
Q 015225 384 VEDEVVVINSIVLPNKVLNVS 404 (411)
Q Consensus 384 i~~~~~v~~~~i~~~~~v~~~ 404 (411)
|++++.|.+|+|+.++.|..+
T Consensus 366 i~~~~~i~~~~ig~~~~i~~~ 386 (420)
T 3brk_X 366 IGRHAQLSNVVIDHGVVIPEG 386 (420)
T ss_dssp ECTTCEEEEEEECTTCEECTT
T ss_pred ECCCCEEeceEECCCCEECCC
Confidence 999998855655555555443
No 159
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.97 E-value=6.2e-10 Score=104.95 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=58.9
Q ss_pred CCEECCCCEECCCcEECCCcEECCC-cEEE-eeE-ECCCCEECCCcEEE-eeEECCCCEECCCcEEecCCcCCcccceeE
Q 015225 302 SAKVHPTAKIGPNVSISANVRVGAG-VRLI-SCI-VLDDVEIKENAVVL-NSIIGWKSSLGRWARVQGNGDYNAKLGITI 377 (411)
Q Consensus 302 ~~~v~~~~~i~~~~~ig~~~~i~~~-~~i~-~~~-i~~~~~i~~~~~i~-~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~ 377 (411)
++.|++++.|++++.||++|.|+++ +.|. ++. ||+ |.|+. .|. +++||++|.|+.++.|.+.- .....+.++
T Consensus 217 gv~I~p~a~I~~~a~IG~gv~Ig~g~a~Ig~nv~vIG~-~~I~~--~Ig~~vvIGdnv~Ig~ga~I~g~l-~g~~~~~Vv 292 (387)
T 2rij_A 217 NTRILESSKVRMGASLAAGTTIMPGASYVNFNAGTTGA-CMVEG--RISSSAIVGEGSDVGGGASILGVL-SGTSGNAIS 292 (387)
T ss_dssp TCEESCGGGBBTTCBCCTTCEECSSSCEECTTCEESSC-CEECS--EECTTCEECTTCEECTTCEECCBC-SSTTCCBCE
T ss_pred CEEEcCCCEECCCeEEcCCCEEeCCeeEECCCcEEECC-EEEee--EECCCCEECCCCEECCCceEccee-cCCCccCeE
Confidence 4444444444445555555555553 4443 233 455 55542 444 45677777777776543310 011122378
Q ss_pred ECCCCEECCCcE----E-cceEEcCCCEEcCCCCC
Q 015225 378 LGEAVTVEDEVV----V-INSIVLPNKVLNVSVQE 407 (411)
Q Consensus 378 i~~~~~i~~~~~----v-~~~~i~~~~~v~~~~~~ 407 (411)
||++|+||+++. | .+|+|++|++|.++++.
T Consensus 293 IGdnv~IGagAv~GV~IGdgavIGAGsVVt~dv~i 327 (387)
T 2rij_A 293 VGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKF 327 (387)
T ss_dssp ECTTCEECTTCEECSCBCTTCEECTTCEECTTCEE
T ss_pred EeCCCEECCCCcCCcEECCCCEECCCCEECCCcee
Confidence 888888888765 4 57888889999888764
No 160
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.90 E-value=3.3e-09 Score=93.54 Aligned_cols=44 Identities=23% Similarity=0.368 Sum_probs=27.3
Q ss_pred eeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEE
Q 015225 348 NSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 348 ~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
+++||++|.||.++.|.++ +.||+++.|+++++|... +.|++++
T Consensus 118 ~v~Igd~v~IG~~a~I~~g---------v~IG~~~~IgagsvV~~d-v~~~~~~ 161 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPG---------VKIGDGAIIAAEAVVTKN-VAPYSIV 161 (219)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CcEECCCeEECCCCEEcCC---------CEECCCCEECCCCEEccc-CCCCeEE
Confidence 5667777777777777666 667777777666666432 3444443
No 161
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.86 E-value=3e-09 Score=93.75 Aligned_cols=44 Identities=25% Similarity=0.404 Sum_probs=30.5
Q ss_pred eeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEE
Q 015225 348 NSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 348 ~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
+++||++|.||.+|.|.++ +.||++|.|+++++|... |.|++++
T Consensus 111 ~v~IG~~v~IG~~a~I~~g---------v~IG~~~iIgagsvV~~d-Vp~~~vv 154 (212)
T 3eev_A 111 DTIIGHDVWIGTEAMIMPG---------VKIGHGAIIASRSVVTKD-VAPYEVV 154 (212)
T ss_dssp CEEECSSCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred CeEECCCCEECCCCEEcCC---------CEECCCCEECCCCEEccc-cCCCcEE
Confidence 5677788888887777777 777777777777777433 3444444
No 162
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.76 E-value=4.8e-09 Score=91.92 Aligned_cols=87 Identities=16% Similarity=0.229 Sum_probs=49.0
Q ss_pred ECCCCEECCCcEECCCcEECCCcEEEe-----e---EECCCCEECCC----------cEEE-eeEECCCCEECCCcEEec
Q 015225 305 VHPTAKIGPNVSISANVRVGAGVRLIS-----C---IVLDDVEIKEN----------AVVL-NSIIGWKSSLGRWARVQG 365 (411)
Q Consensus 305 v~~~~~i~~~~~ig~~~~i~~~~~i~~-----~---~i~~~~~i~~~----------~~i~-~s~i~~~~~ig~~~~i~~ 365 (411)
+.+++.+++.++||++|.|+++++|.. . ..+.++.++++ +.+. +++||++|.||.++.|.+
T Consensus 51 i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~~v~Ig~~v~IG~~a~I~~ 130 (209)
T 1mr7_A 51 LYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTIIGNDVWIGKDVVIMP 130 (209)
T ss_dssp ESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGSCCCCCEEECSSCEECTTCEECT
T ss_pred EeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccccccccCCcEECCCCEEcCCCEEcC
Confidence 333444455567777777777776621 1 11122223332 2222 567777777777777777
Q ss_pred CCcCCcccceeEECCCCEECCCcEEcceEEcCCCEE
Q 015225 366 NGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 366 ~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
+ +.||+++.|+++++|... +.+++++
T Consensus 131 g---------v~Ig~~~~Igags~V~~~-v~~~~i~ 156 (209)
T 1mr7_A 131 G---------VKIGDGAIVAANSVVVKD-IAPYMLA 156 (209)
T ss_dssp T---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred C---------CEECCCCEEcCCCEEcCC-CCCCeEE
Confidence 6 777777777777777433 3444443
No 163
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.74 E-value=2.1e-08 Score=87.92 Aligned_cols=97 Identities=12% Similarity=0.151 Sum_probs=64.1
Q ss_pred CCcEECCCCEECC--------CCEE--------CCCcEECCCcEECCCcEEE--ee--EECC---------------CCE
Q 015225 295 GDVYIHPSAKVHP--------TAKI--------GPNVSISANVRVGAGVRLI--SC--IVLD---------------DVE 339 (411)
Q Consensus 295 ~~~~i~~~~~v~~--------~~~i--------~~~~~ig~~~~i~~~~~i~--~~--~i~~---------------~~~ 339 (411)
+++.||+++.+.+ ++++ .+.+.||++|.|+++|+|. .. ...+ ++.
T Consensus 21 ~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~~~ 100 (212)
T 1xat_A 21 PNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAFAG 100 (212)
T ss_dssp TTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGGGG
T ss_pred CCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccccc
Confidence 4566666666664 3554 2578899999999998873 10 1111 133
Q ss_pred ECCCcEEE-eeEECCCCEECCCcEEecCCcCCcccceeEECCCCEECCCcEEcceEEcCCCEE
Q 015225 340 IKENAVVL-NSIIGWKSSLGRWARVQGNGDYNAKLGITILGEAVTVEDEVVVINSIVLPNKVL 401 (411)
Q Consensus 340 i~~~~~i~-~s~i~~~~~ig~~~~i~~~~~~~~~~~~~~i~~~~~i~~~~~v~~~~i~~~~~v 401 (411)
+++++.+. .++||++|.||.+|.|..+ +.||++|.|+++++|... |.|++++
T Consensus 101 i~~~~~~~~~v~IG~~v~IG~~a~I~~g---------v~Ig~~~~IgagsvV~~~-vp~~~~~ 153 (212)
T 1xat_A 101 AVNGYQPAGDTLIGHEVWIGTEAMFMPG---------VRVGHGAIIGSRALVTGD-VEPYAIV 153 (212)
T ss_dssp CCCCCCCCCCEEECTTCEECTTCEECTT---------CEECTTCEECTTCEECSC-BCTTEEE
T ss_pred cccCceecCCeEECCCCEECCCCEEeCC---------CEECCCCEECCCCEEccc-CCCCcEE
Confidence 44555554 5788888888888888877 888888888888888443 4555544
No 164
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.72 E-value=1.4e-08 Score=89.43 Aligned_cols=34 Identities=21% Similarity=0.252 Sum_probs=22.1
Q ss_pred eEECCCCEECCCcEE-cceEEcCCCEEcCCCCCcc
Q 015225 376 TILGEAVTVEDEVVV-INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~~~~~~ 409 (411)
+.||.++.|..++.| .+|+|++|++|.+++|+..
T Consensus 125 v~IG~~a~I~~gv~IG~~~~IgagsvV~~dv~~~~ 159 (219)
T 4e8l_A 125 VWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYS 159 (219)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred eEECCCCEEcCCCEECCCCEECCCCEEcccCCCCe
Confidence 444444444444444 5789999999999988753
No 165
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.67 E-value=8.8e-08 Score=83.91 Aligned_cols=34 Identities=15% Similarity=0.131 Sum_probs=23.2
Q ss_pred eEECCCCEECCCcEE-cceEEcCCCEEcCCCCCcc
Q 015225 376 TILGEAVTVEDEVVV-INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~~~~~~ 409 (411)
+.||.++.|..++.| .+|+|++|++|++++|+..
T Consensus 117 v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~vp~~~ 151 (212)
T 1xat_A 117 VWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYA 151 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred CEECCCCEEeCCCEECCCCEECCCCEEcccCCCCc
Confidence 444444555555555 5788999999999887653
No 166
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.65 E-value=1.2e-07 Score=83.31 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=18.6
Q ss_pred eEECCCCEECCCcEE-cceEEcCCCEEcCCCCCc
Q 015225 376 TILGEAVTVEDEVVV-INSIVLPNKVLNVSVQEE 408 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~~~~~ 408 (411)
|.||.++.|..++.| .+|+|++|++|.+++|+.
T Consensus 118 v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~ 151 (212)
T 3eev_A 118 VWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPY 151 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTT
T ss_pred CEECCCCEEcCCCEECCCCEECCCCEEccccCCC
Confidence 444444444444444 456666666666666654
No 167
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=98.50 E-value=3.6e-06 Score=82.13 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=116.5
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCcccC-CcchhHhHHHHhccC-----CCCcEEEEecccchHHHHHHHhhhcc
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA-GQPMIQHPISACKRI-----PNLAQIFLIGFYEEREFALYVSSISN 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi~-g~pli~~~l~~l~~~-----~gi~~I~Iv~~~~~~~i~~~~~~~~~ 75 (411)
.++.+|+|||| .||||+- ..||.++|+. ++++++..++++..+ ..+.-++.......+.++++++++ .
T Consensus 126 ~kvavvlLaGG--lGTRLG~---~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T~~~T~~~f~k~-~ 199 (528)
T 3r3i_A 126 NKLVVVKLNGG--LGTSMGC---KGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNTDEDTKKILQKY-N 199 (528)
T ss_dssp TTEEEEEECCC--BCTTTTC---SSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHSSCGGG-T
T ss_pred CceEEEEeCCC--CccccCC---CCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccchhHHHHHHHHhc-C
Confidence 46789999999 9999966 7899999996 889999999988764 135545555556667788888874 3
Q ss_pred cCCcceEEeeCC---------------------------CCCCChHHHHH-----HHHHhhccCCCeEEEEcCCcccCCC
Q 015225 76 ELKVPVRYLKED---------------------------KPHGSAGGLYY-----FRDMIMEENPSHIILLNCDVCCSFP 123 (411)
Q Consensus 76 ~~~~~i~~v~~~---------------------------~~~g~~~~l~~-----~~~~i~~~~~~~~lv~~~D~i~~~~ 123 (411)
.++.++.+..|. .+.|.++.... .++.+...+-+++.+...|.+....
T Consensus 200 ~fg~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~v 279 (528)
T 3r3i_A 200 HCRVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATV 279 (528)
T ss_dssp TSSCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCC
T ss_pred ccCCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCccccc
Confidence 345455443321 12344432221 2344434456899999999985332
Q ss_pred hHHHHHHHHhc----CCeeEEEEEecCccccc-ceeEEEEcCCCCceeEEeccCCC--------cccCcccceEEEeCHH
Q 015225 124 LPDLLEAHKRY----GGMGTMLVIKVSAESAH-QFGELIADPNTKELLHYTEKPET--------FVSDLINCGVYVFTPD 190 (411)
Q Consensus 124 l~~~l~~~~~~----~~~~~~~~~~~~~~~~~-~~g~v~~d~~~~~v~~~~e~~~~--------~~~~~~~~Giyi~~~~ 190 (411)
-..++..+.+. ++++.+-+++. ..+. .-|.+..-...-++++|.+-|.. ....+.|+...+|+-+
T Consensus 280 Dp~~Lg~~~~~~~~~~~d~~~kVv~K--t~~dek~Gvl~~~dGk~~vvEyseip~e~~~~~~g~~~f~~~Ntnnlw~~L~ 357 (528)
T 3r3i_A 280 DLYILNHLMNPPNGKRCEFVMEVTNK--TRADVKGGTLTQYEGKLRLVEIAQVPKAHVDEFKSVSKFKIFNTNNLWISLA 357 (528)
T ss_dssp CHHHHHHHSSCSSSCCCSEEEEECCC--CTTCCSSCEEECSSSSCEEECTTSSCGGGTTTSSCSSSCCCCEEEEEEEEHH
T ss_pred CHHHHHHHHhcccccCCcEEEEEeEc--cccCCcccEEEEECCeEEEEEecCCChhHhhccCCcccCCeEEEEEEEEEHH
Confidence 23455666555 66765544433 3332 23554432022346666554321 1234578999999998
Q ss_pred HHHHhhhh
Q 015225 191 FFTAIQGV 198 (411)
Q Consensus 191 ~~~~l~~~ 198 (411)
.++.+.+.
T Consensus 358 ~L~~v~~~ 365 (528)
T 3r3i_A 358 AVKRLQEQ 365 (528)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 87665543
No 168
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.38 E-value=2.9e-07 Score=80.57 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=22.8
Q ss_pred eEECCCCEECCCcEE-cceEEcCCCEEcCCCCCcc
Q 015225 376 TILGEAVTVEDEVVV-INSIVLPNKVLNVSVQEEI 409 (411)
Q Consensus 376 ~~i~~~~~i~~~~~v-~~~~i~~~~~v~~~~~~~~ 409 (411)
+.||.++.|..++.| .+|+|++|++|.+++|+..
T Consensus 120 v~IG~~a~I~~gv~Ig~~~~Igags~V~~~v~~~~ 154 (209)
T 1mr7_A 120 VWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYM 154 (209)
T ss_dssp CEECTTCEECTTCEECTTCEECTTCEECSCBCTTE
T ss_pred CEEcCCCEEcCCCEECCCCEEcCCCEEcCCCCCCe
Confidence 444444444444455 5799999999999998753
No 169
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=98.04 E-value=0.00081 Score=65.15 Aligned_cols=183 Identities=16% Similarity=0.127 Sum_probs=110.8
Q ss_pred CceEEEEEecCCCCCcccccCCCCCCccCccc-CCcchhHhHHHHhccC-----CCCcEEEEecccchHHHHHHHhhhcc
Q 015225 2 EKVVAVIMVGGPTKGTRFRPLSFNTPKPLFPL-AGQPMIQHPISACKRI-----PNLAQIFLIGFYEEREFALYVSSISN 75 (411)
Q Consensus 2 ~~~~aiIla~G~~~g~rl~plt~~~pK~llpi-~g~pli~~~l~~l~~~-----~gi~~I~Iv~~~~~~~i~~~~~~~~~ 75 (411)
+++.+|.|||| .||||+- ..||.++|+ .++++++..++++... ..+.=++.......+..++++++. +
T Consensus 75 ~kvavvlLaGG--lGTRLG~---~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T~~~T~~~~~k~-~ 148 (484)
T 3gue_A 75 RQAVVLKLNGG--LGTGMGL---NGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFSTSGETKNFLRKY-P 148 (484)
T ss_dssp TTEEEEEEECC--CCGGGTC---SSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTTHHHHHHHGGGC-H
T ss_pred hhcEEEEEcCC--cccccCC---CCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcchhHHHHHHHHhC-c
Confidence 35778999999 9999975 789999999 7889999998887653 134434445545567788898874 2
Q ss_pred cCCc---ceEEeeCC-----------------------CCCCChHHHHH-----HHHHhhccCCCeEEEEcCCcccCCCh
Q 015225 76 ELKV---PVRYLKED-----------------------KPHGSAGGLYY-----FRDMIMEENPSHIILLNCDVCCSFPL 124 (411)
Q Consensus 76 ~~~~---~i~~v~~~-----------------------~~~g~~~~l~~-----~~~~i~~~~~~~~lv~~~D~i~~~~l 124 (411)
.++. .+.+..|. .+.|.++.... .++.+....-+++.+...|.+....=
T Consensus 149 ~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~D 228 (484)
T 3gue_A 149 TLYEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLD 228 (484)
T ss_dssp HHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCC
T ss_pred ccCCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccC
Confidence 2221 12221110 02344442221 23444444568999999999653322
Q ss_pred HHHHHHHHhcCCeeEEEEEecCccccc-ceeEEEEc--------CCCC--ceeEEeccCCC--------cccCcccceEE
Q 015225 125 PDLLEAHKRYGGMGTMLVIKVSAESAH-QFGELIAD--------PNTK--ELLHYTEKPET--------FVSDLINCGVY 185 (411)
Q Consensus 125 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~~d--------~~~~--~v~~~~e~~~~--------~~~~~~~~Giy 185 (411)
..++.++.+.++++.+-+.+. ..+. .-|.+... ..++ +++++.+-|.. ....+.+++-.
T Consensus 229 p~~lG~~~~~~~d~~~kvv~K--t~~dekgG~l~~~~~~~~~~~~~dG~~~vvEyseip~e~~~~f~~~~g~~~FNtnNi 306 (484)
T 3gue_A 229 VRLLDYMHEKQLGFLMEVCRR--TESDKKGGHLAYKDVIDETTGQTRRRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNI 306 (484)
T ss_dssp HHHHHHHHHTTCSEEEEEEEC--CTTCCSSEEEEEEC--------CCCEEEEEEGGGSCGGGHHHHTCTTTSCEEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEEEC--CCCCCceeEEEEEccccccccCCCCCEEEEEeccCCHHHHhhhcCCCCceEeEeeeE
Confidence 556777888888877766664 3332 33433321 1234 46666654422 12234588888
Q ss_pred EeCHHHH
Q 015225 186 VFTPDFF 192 (411)
Q Consensus 186 i~~~~~~ 192 (411)
+++-..+
T Consensus 307 ~~~l~~l 313 (484)
T 3gue_A 307 WINLMEL 313 (484)
T ss_dssp EEEHHHH
T ss_pred EEEHHHH
Confidence 8887665
No 170
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.61 E-value=6.4e-05 Score=65.70 Aligned_cols=105 Identities=15% Similarity=0.141 Sum_probs=74.7
Q ss_pred CceEEEEEe--cCCCCCcccccCCCCCCccCcccCCcchhHhHHHHhccCCCCcEE-EEecccchHHHHHHHhhhcccCC
Q 015225 2 EKVVAVIMV--GGPTKGTRFRPLSFNTPKPLFPLAGQPMIQHPISACKRIPNLAQI-FLIGFYEEREFALYVSSISNELK 78 (411)
Q Consensus 2 ~~~~aiIla--~G~~~g~rl~plt~~~pK~llpi~g~pli~~~l~~l~~~~gi~~I-~Iv~~~~~~~i~~~~~~~~~~~~ 78 (411)
+.|.+||++ |. ..|||.+ ...+......++||++|+++.+... +++.+ ++++++.. . .. .+
T Consensus 2 ~~~~~vip~k~g~--~KtRL~~---~l~~~~~~~l~~~ll~~vl~~l~~~-~~~~v~vvv~~~~~--~----~~---~~- 65 (211)
T 2i5e_A 2 NAMRAVIPYKKAG--AKSRLSP---VLSLQEREEFVELMLNQVISSLKGA-GIEQVDILSPSVYG--L----EE---MT- 65 (211)
T ss_dssp CCCEEEEECCCTT--TTGGGTT---TSCHHHHHHHHHHHHHHHHHHHHHT-TCSEEEEEESSCTT--C----SS---CC-
T ss_pred CceEEEEEeCCCC--CccccCc---cCCHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEEcCcHH--H----Hh---hc-
Confidence 468899999 77 8899965 2233333366799999999999996 78888 88876532 1 11 12
Q ss_pred cceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEEcCCccc--CCChHHHHH
Q 015225 79 VPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILLNCDVCC--SFPLPDLLE 129 (411)
Q Consensus 79 ~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~--~~~l~~~l~ 129 (411)
.+.++.+. .|.++++..+.+.+ .+.++++.||++. ...+..+++
T Consensus 66 -~~~~v~~~--~gl~~sl~~a~~~~----~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 66 -EARVLLDE--KDLNEALNRYLKEA----EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp -SSEEEECC--SCHHHHHHHHHHHC----CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred -CCEEEECC--CCHHHHHHHHHHhc----CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 34556554 68889998887765 3789999999985 444666654
No 171
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=97.19 E-value=0.0027 Score=63.20 Aligned_cols=187 Identities=14% Similarity=0.166 Sum_probs=111.9
Q ss_pred ceEEEEEecCCCCCcccccCCCCCCccCcccC---CcchhHhHHHHhccCCC--CcEEEEecccchHHHHHHHhhhcccC
Q 015225 3 KVVAVIMVGGPTKGTRFRPLSFNTPKPLFPLA---GQPMIQHPISACKRIPN--LAQIFLIGFYEEREFALYVSSISNEL 77 (411)
Q Consensus 3 ~~~aiIla~G~~~g~rl~plt~~~pK~llpi~---g~pli~~~l~~l~~~~g--i~~I~Iv~~~~~~~i~~~~~~~~~~~ 77 (411)
++.+|+|||| .|+||+- ..||.++|++ +++++++.++++.+..| +.-++.......+.+.++++++. .-
T Consensus 114 kvavvllaGG--lGTRLG~---~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T~~~T~~~~~~fg-l~ 187 (630)
T 3ogz_A 114 KTVFVLVAGG--LGERLGY---SSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDTHDRTLQLLRELQ-LE 187 (630)
T ss_dssp GEEEEEECCC--EEGGGTE---EEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTTHHHHHHHHHHTT-CC
T ss_pred hceEEEecCC--cccccCC---CCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccchHHHHHHHHHhC-CC
Confidence 5778999999 9999976 7799999997 99999999999886422 44344455556677888888721 11
Q ss_pred CcceEEeeCCC----------------------CCCChHHHHH-----------------------HHHHhhccCCCeEE
Q 015225 78 KVPVRYLKEDK----------------------PHGSAGGLYY-----------------------FRDMIMEENPSHII 112 (411)
Q Consensus 78 ~~~i~~v~~~~----------------------~~g~~~~l~~-----------------------~~~~i~~~~~~~~l 112 (411)
..++.+..|.. +.|.++.... .++.+...+-+++.
T Consensus 188 ~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~ 267 (630)
T 3ogz_A 188 VPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIV 267 (630)
T ss_dssp CTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEE
T ss_pred cccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEE
Confidence 11333332210 2344432221 23444334468899
Q ss_pred EEcCCccc-CCChHHHHHHHHhcCCeeEEEEEecCcccccceeEEEE-cCCCCce-----eEEecc---------CC-C-
Q 015225 113 LLNCDVCC-SFPLPDLLEAHKRYGGMGTMLVIKVSAESAHQFGELIA-DPNTKEL-----LHYTEK---------PE-T- 174 (411)
Q Consensus 113 v~~~D~i~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~v~~-d~~~~~v-----~~~~e~---------~~-~- 174 (411)
+...|.+. ...-..++-.+.++++++.+-+.+. .....-|.+.. ...+|+. ++|.|- ++ .
T Consensus 268 v~~vDN~L~~~~DP~~lG~~~~~~~d~~~kvv~r--~p~E~vG~l~~~~~~dGk~~~v~vVEYsei~~~~~~~~~~~g~~ 345 (630)
T 3ogz_A 268 FIQDTNAGATITIPISLALSAEHSLDMNFTCIPR--VPKEPIGLLCRTKKNSGDPWLVANVEYNVFAEVSRALNKDGGDE 345 (630)
T ss_dssp EECTTBTTHHHHHHHHHHHHHHTTCSEEEEEECC--CSSCSSCEEEEEESSTTSCCEEEEECHHHHHHHHHHC-------
T ss_pred EEccCCccccccCHHHhHHHHhcCCCEEEEEEEC--CCCcceeeEEEEecCCCceeeeeEEEeccCCHhHhhccCCCccc
Confidence 99999954 2222346677788888877666653 33344565543 1134554 333321 11 0
Q ss_pred ------cccCcccceEEEeCHH-HHHHhhh
Q 015225 175 ------FVSDLINCGVYVFTPD-FFTAIQG 197 (411)
Q Consensus 175 ------~~~~~~~~Giyi~~~~-~~~~l~~ 197 (411)
......|+..++|+-+ +.+.+.+
T Consensus 346 ~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~ 375 (630)
T 3ogz_A 346 VSDPTGFSPFPGSVNTLVFKLSSYVDRLRE 375 (630)
T ss_dssp -----CCCSSCEEEEEEEEEHHHHHHHHHH
T ss_pred cccccccccccccceeeeEEHHHHHHHHHh
Confidence 1122348899999986 5556554
No 172
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.05 E-value=1.6 Score=37.97 Aligned_cols=94 Identities=14% Similarity=0.069 Sum_probs=63.1
Q ss_pred cchhHhHHHHhccCCCC-cEEEEecccchHHHHHHHhhhcccCCcceEEeeCC--------CCCCChHHHHHHHHHhhcc
Q 015225 36 QPMIQHPISACKRIPNL-AQIFLIGFYEEREFALYVSSISNELKVPVRYLKED--------KPHGSAGGLYYFRDMIMEE 106 (411)
Q Consensus 36 ~pli~~~l~~l~~~~gi-~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~--------~~~g~~~~l~~~~~~i~~~ 106 (411)
...|..+|+.+..+... -+|+|+-....+...+.+++... ...+.++... ...|.+.+...+++...
T Consensus 13 ~~~l~~~l~Sl~~q~~~~~eiivvDd~S~d~t~~~~~~~~~--~~~i~~i~~~~~~~~~~~~n~G~~~a~N~gi~~a~-- 88 (255)
T 1qg8_A 13 SDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLN--DNRVRFYQSDISGVKERTEKTRYAALINQAIEMAE-- 88 (255)
T ss_dssp TTTHHHHHHHHHTCSCCCEEEEEEECSCCHHHHHHHGGGGG--STTEEEEECCCCSHHHHHSSCHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHhccCCceEEEEEECCCCchHHHHHHHHhh--cCCEEEEecccccccccccccCHHHHHHHHHHHcC--
Confidence 36788888888765221 24666644444555666666422 4567877765 55677778777777654
Q ss_pred CCCeEEEEcCCcccCCC-hHHHHHHHHhc
Q 015225 107 NPSHIILLNCDVCCSFP-LPDLLEAHKRY 134 (411)
Q Consensus 107 ~~~~~lv~~~D~i~~~~-l~~~l~~~~~~ 134 (411)
.+.++++.+|.+...+ +..+++...+.
T Consensus 89 -g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 89 -GEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp -CSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred -CCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 5888999999987444 78888877655
No 173
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=90.10 E-value=1.1 Score=43.57 Aligned_cols=106 Identities=17% Similarity=0.141 Sum_probs=69.4
Q ss_pred CcccCCc--chhHhHHHHhccCCCCc---EEEEecccchH-HHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHh
Q 015225 30 LFPLAGQ--PMIQHPISACKRIPNLA---QIFLIGFYEER-EFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMI 103 (411)
Q Consensus 30 llpi~g~--pli~~~l~~l~~~~gi~---~I~Iv~~~~~~-~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i 103 (411)
.+|.-|. ..|..+|+.+.....-. +|+||-....+ ...+.+++..+.++.+++++......|.+.+...+++..
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~~~v~vi~~~~n~G~~~a~N~g~~~A 113 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVS 113 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEECSSCCCHHHHHHHHHHHC
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCCCcEEEEECCCCCChHHHHHHHHHhc
Confidence 3455565 48888999887753222 67776433222 233444443233444688887766678888888888766
Q ss_pred hccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCee
Q 015225 104 MEENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMG 138 (411)
Q Consensus 104 ~~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~ 138 (411)
. .+.++++.+|... +.-|..+++...+....+
T Consensus 114 ~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 114 R---GQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp C---SSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred c---CCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 4 5888899999986 555889988877665444
No 174
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=89.86 E-value=1.4 Score=37.88 Aligned_cols=97 Identities=10% Similarity=0.082 Sum_probs=60.0
Q ss_pred chhHhHHHHhccCCCCc--EEEEecccchHHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEE
Q 015225 37 PMIQHPISACKRIPNLA--QIFLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILL 114 (411)
Q Consensus 37 pli~~~l~~l~~~~gi~--~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~ 114 (411)
..|...|+.+..+ ... +|+||-....+...+.+++...+. ..+.++.. +..|.+.+.-.+++... .+.++++
T Consensus 18 ~~l~~~l~Sl~~q-~~~~~eiIvvDd~S~d~t~~~~~~~~~~~-~~i~~i~~-~n~G~~~a~N~g~~~a~---g~~i~~l 91 (240)
T 3bcv_A 18 KYLDQCVQALLAQ-TLSDIEIILIDDESPDNCPKICDDYAAQY-PNIKVIHK-KNAGLGMACNSGLDVAT---GEYVAFC 91 (240)
T ss_dssp TTHHHHHHHHHTC-SSSSEEEEEEECCCSSSHHHHHHHHHHHC-SSEEEEEC-CCCCHHHHHHHHHHHCC---SSEEEEC
T ss_pred HHHHHHHHHHHhC-cCCCeEEEEEECCCCcCHHHHHHHHHhhC-CCEEEEEC-CCCChHHHHHHHHHHcC---CCEEEEE
Confidence 4677888887765 222 466554322222233343322222 24666664 45688888888877664 5888999
Q ss_pred cCCcccCCC-hHHHHHHHHhcCCeeE
Q 015225 115 NCDVCCSFP-LPDLLEAHKRYGGMGT 139 (411)
Q Consensus 115 ~~D~i~~~~-l~~~l~~~~~~~~~~~ 139 (411)
.+|.+...+ |..+++...+.+.+++
T Consensus 92 D~Dd~~~~~~l~~l~~~~~~~~~~~v 117 (240)
T 3bcv_A 92 DSDDYVDSDMYMTMYNVAQKYTCDAV 117 (240)
T ss_dssp CTTCCCCTTHHHHHHHHHHHHTCSEE
T ss_pred CCCCcCCHHHHHHHHHHHHhcCCCEE
Confidence 999987444 7888887776566644
No 175
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=89.33 E-value=0.75 Score=40.51 Aligned_cols=88 Identities=6% Similarity=0.019 Sum_probs=60.3
Q ss_pred cchhHhHHHHhccCCCCcEEEEecccchHHH---HHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEE
Q 015225 36 QPMIQHPISACKRIPNLAQIFLIGFYEEREF---ALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHII 112 (411)
Q Consensus 36 ~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i---~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~l 112 (411)
++|+.++++.+... +...++++++...... ..+. +..+.++.+ ...|.+.++..+...+.....+.++
T Consensus 37 ~~ll~~tl~~~~~~-~~~~vvvvt~~~~~~~~~~~~~~-------~~~~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vl 107 (242)
T 3cgx_A 37 RHFVQDMLQGLARL-HADLHICYVPGDADLPEKFKAWL-------GPQHMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVV 107 (242)
T ss_dssp HHHHHHHHHHHTTS-SSEEEEEECCCCTTHHHHHHHHH-------CTTSEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHhC-CCCEEEEEcCCchhhhhhhhhhc-------cCCcEEecC-CCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 58999999999996 7777777766544332 2222 123455555 3468899999988765222247899
Q ss_pred EEcCCccc--CCChHHHHHHHH
Q 015225 113 LLNCDVCC--SFPLPDLLEAHK 132 (411)
Q Consensus 113 v~~~D~i~--~~~l~~~l~~~~ 132 (411)
++.+|++. ...|..+++...
T Consensus 108 iigaD~P~L~~~~l~~a~~~l~ 129 (242)
T 3cgx_A 108 LMGSDIPDYPCELVQKALNDLQ 129 (242)
T ss_dssp EECSSCTTCCHHHHHHHHHHTT
T ss_pred EEcCCCCCCCHHHHHHHHHHhc
Confidence 99999985 556788776543
No 176
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=88.40 E-value=3.7 Score=40.99 Aligned_cols=103 Identities=15% Similarity=0.161 Sum_probs=66.4
Q ss_pred cccCCc--chhHhHHHHhccCCCCc---EEEEecccch-HHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhh
Q 015225 31 FPLAGQ--PMIQHPISACKRIPNLA---QIFLIGFYEE-REFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIM 104 (411)
Q Consensus 31 lpi~g~--pli~~~l~~l~~~~gi~---~I~Iv~~~~~-~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~ 104 (411)
+|.-|. ..|..+|+.+....... +|+||-.... +.+.+.++++.+.+ ..+.++......|.+.+...+++...
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~-~~v~vi~~~~n~G~~~A~N~G~~~A~ 196 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALF-PSVRILRTKKREGLIRTRMLGASVAT 196 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTS-TTEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhC-CeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 455565 47888888877642222 6777644322 22134444432223 36788877666788888888888664
Q ss_pred ccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCe
Q 015225 105 EENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGM 137 (411)
Q Consensus 105 ~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~ 137 (411)
.+.++++.+|... +.-|..+++...+....
T Consensus 197 ---gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~ 227 (570)
T 2d7i_A 197 ---GDVITFLDSHCEANVNWLPPLLDRIARNRKT 227 (570)
T ss_dssp ---SSEEEECCSSEEECTTCSHHHHHHHHHCTTE
T ss_pred ---CCEEEEEcCCccccccHHHHHHHHHHhCCCE
Confidence 5788899999986 45588888887665433
No 177
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=76.39 E-value=22 Score=34.42 Aligned_cols=101 Identities=16% Similarity=0.185 Sum_probs=65.9
Q ss_pred CcccCCc-c-hhHhHHHHhccCCCCc---EEEEecccc-hHHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHh
Q 015225 30 LFPLAGQ-P-MIQHPISACKRIPNLA---QIFLIGFYE-EREFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMI 103 (411)
Q Consensus 30 llpi~g~-p-li~~~l~~l~~~~gi~---~I~Iv~~~~-~~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i 103 (411)
.+|.-|. . .|..+|+.+....... +|+||-... .+.+...+.. . ..+.++......|.+.+...+++..
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~----~-~~v~vi~~~~n~G~~~A~N~G~~~A 145 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGK----I-EKVRVLRNDRREGLMRSRVRGADAA 145 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGG----B-TTEEEEECSSCCHHHHHHHHHHHHC
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhc----C-CCEEEEECCCCcCHHHHHHHHHHhc
Confidence 4556666 3 7888888877642222 677764322 2233333322 2 3577777666678888888888766
Q ss_pred hccCCCeEEEEcCCccc-CCChHHHHHHHHhcCCee
Q 015225 104 MEENPSHIILLNCDVCC-SFPLPDLLEAHKRYGGMG 138 (411)
Q Consensus 104 ~~~~~~~~lv~~~D~i~-~~~l~~~l~~~~~~~~~~ 138 (411)
. .+.++++.+|... +.-|..+++...+....+
T Consensus 146 ~---gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~v 178 (501)
T 2ffu_A 146 Q---AKVLTFLDSHCECNEHWLEPLLERVAEDRTRV 178 (501)
T ss_dssp C---SSEEEECCSSEEECTTCHHHHHHHHHHCTTEE
T ss_pred C---CCEEEEECCCcccCccHHHHHHHHHHhCCCeE
Confidence 4 5788889999986 555899998887665543
No 178
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=66.74 E-value=22 Score=35.59 Aligned_cols=100 Identities=10% Similarity=0.002 Sum_probs=60.9
Q ss_pred cccCC-cchhHhHHHHhccCCCCc-EEEEecccchHHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhhccCC
Q 015225 31 FPLAG-QPMIQHPISACKRIPNLA-QIFLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENP 108 (411)
Q Consensus 31 lpi~g-~pli~~~l~~l~~~~gi~-~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~ 108 (411)
+|.-| ...|..+|+.+..+...+ +|+|+-+...+...+.+++..... ..+.++. ....|.+.++..+++... .
T Consensus 381 i~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~d~t~~~~~~~~~~~-~~i~~~~-~~n~G~~~a~n~g~~~a~---g 455 (625)
T 2z86_A 381 IPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANH-PRVRFIS-QKNKGIGSASNTAVRLCR---G 455 (625)
T ss_dssp EEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCSSSHHHHHHHHHTTC-TTEEEEE-ECCCCHHHHHHHHHHHCC---S
T ss_pred EeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCChhHHHHHHHHHhhC-CcEEEEe-CCCCCHHHHHHHHHHhcC---C
Confidence 44434 478899999987652222 566654322222334444432222 2466665 345688888888877664 5
Q ss_pred CeEEEEcCCcccCC-ChHHHHHHHHhcC
Q 015225 109 SHIILLNCDVCCSF-PLPDLLEAHKRYG 135 (411)
Q Consensus 109 ~~~lv~~~D~i~~~-~l~~~l~~~~~~~ 135 (411)
+.++++.+|.+... -|..+++...+..
T Consensus 456 ~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 456 FYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp SEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred CEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 78889999998644 4788887765443
No 179
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=65.46 E-value=28 Score=34.71 Aligned_cols=105 Identities=7% Similarity=0.064 Sum_probs=64.8
Q ss_pred CcccCCc-chhHhHHHHhccCC--CCcEEEEecccchHHHHHHHhhhcccCCcceEEeeCCC-CCCChHHHHHHHHHhhc
Q 015225 30 LFPLAGQ-PMIQHPISACKRIP--NLAQIFLIGFYEEREFALYVSSISNELKVPVRYLKEDK-PHGSAGGLYYFRDMIME 105 (411)
Q Consensus 30 llpi~g~-pli~~~l~~l~~~~--gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~~-~~g~~~~l~~~~~~i~~ 105 (411)
++|.-|. ..|..+|+.+.... ..-+|+||-....+...+.+++.... ..+.++.... ..|.++++..+++...
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~--~~i~~i~~~~~~~g~~~a~N~g~~~a~- 174 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL--LNIKYVRQKDYGYQLCAVRNLGLRAAK- 174 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT--SCEEEEEECCCSCCHHHHHHHHHHHCC-
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc--CCeEEEEeCCCCcchhHHHHHHHHhCC-
Confidence 4555565 68899999988752 13456666443333345556553222 2455554332 3356777777777654
Q ss_pred cCCCeEEEEcCCcccCCC-hHHHHHHHHhcCCeeE
Q 015225 106 ENPSHIILLNCDVCCSFP-LPDLLEAHKRYGGMGT 139 (411)
Q Consensus 106 ~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~~~~~~ 139 (411)
.+.++++.+|.....+ +..+++...+....+.
T Consensus 175 --g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~ 207 (625)
T 2z86_A 175 --YNYVAILDCDMAPNPLWVQSYMELLAVDDNVAL 207 (625)
T ss_dssp --SSEEEEECTTEEECTTHHHHHHHHHHHCTTEEE
T ss_pred --cCEEEEECCCCCCCHHHHHHHHHHHhcCCceEE
Confidence 5788999999987544 7888887766554433
No 180
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=64.58 E-value=10 Score=34.64 Aligned_cols=108 Identities=9% Similarity=0.054 Sum_probs=61.6
Q ss_pred cccCCc-chhHhHHHHhccCC--CCcEEEEecccchHHHHHHHhhhcccCCcceEEee-CCCCCCChHHHHHHHHHhhcc
Q 015225 31 FPLAGQ-PMIQHPISACKRIP--NLAQIFLIGFYEEREFALYVSSISNELKVPVRYLK-EDKPHGSAGGLYYFRDMIMEE 106 (411)
Q Consensus 31 lpi~g~-pli~~~l~~l~~~~--gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~-~~~~~g~~~~l~~~~~~i~~~ 106 (411)
+|.-|. ..|..+|+.+..+. ..-+|+||-+...+...+.+++...+....+.++. .....|-+.++..+++...
T Consensus 54 Ip~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G~~~a~n~g~~~a~-- 131 (329)
T 3ckj_A 54 LPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPGKGEALWRSLAASR-- 131 (329)
T ss_dssp EEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCSHHHHHHHHHHHCC--
T ss_pred EeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCCHHHHHHHHHHhCC--
Confidence 444444 67888888887642 23467776443333334445442111111111221 3445678888888877654
Q ss_pred CCCeEEEEcCCcc-cC-CChHHHHHHHHhc-CCeeEEE
Q 015225 107 NPSHIILLNCDVC-CS-FPLPDLLEAHKRY-GGMGTML 141 (411)
Q Consensus 107 ~~~~~lv~~~D~i-~~-~~l~~~l~~~~~~-~~~~~~~ 141 (411)
.+.++++.+|.. .. ..+..+++...+. +.+++..
T Consensus 132 -gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g 168 (329)
T 3ckj_A 132 -GDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKS 168 (329)
T ss_dssp -CSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEE
T ss_pred -CCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEE
Confidence 578889999998 54 4478888775443 4454333
No 181
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=57.39 E-value=26 Score=35.51 Aligned_cols=102 Identities=12% Similarity=0.157 Sum_probs=64.3
Q ss_pred cccCCc-chhHhHHHHhccCC----CCcEEEEecccch-----HHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHH
Q 015225 31 FPLAGQ-PMIQHPISACKRIP----NLAQIFLIGFYEE-----REFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFR 100 (411)
Q Consensus 31 lpi~g~-pli~~~l~~l~~~~----gi~~I~Iv~~~~~-----~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~ 100 (411)
+|.-|. ..|...|+.+..+. ...+|+||=+... +.+.+.+.. .+..+.++.+. ..|-+++.-.++
T Consensus 186 IptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~----~~~~I~vI~~~-N~G~a~a~N~Gl 260 (657)
T 4fix_A 186 IPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAAR----LGSRLSIHDQP-NLGGSGGYSRVM 260 (657)
T ss_dssp CCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHH----HGGGEEEEECC-CCHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHh----cCCCEEEEECC-CCCHHHHHHHHH
Confidence 343344 78899999988752 2336777643221 133344433 23368888766 677777777777
Q ss_pred HHhhcc-CCCeEEEEcCCcccCC-ChHHHHHHHHhcCCe
Q 015225 101 DMIMEE-NPSHIILLNCDVCCSF-PLPDLLEAHKRYGGM 137 (411)
Q Consensus 101 ~~i~~~-~~~~~lv~~~D~i~~~-~l~~~l~~~~~~~~~ 137 (411)
+..... ..+.++++..|.+... -|..+++........
T Consensus 261 ~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~ 299 (657)
T 4fix_A 261 YEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAP 299 (657)
T ss_dssp HHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSC
T ss_pred HHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCc
Confidence 665322 3578999999998744 488888887765444
No 182
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=47.08 E-value=4 Score=42.02 Aligned_cols=92 Identities=12% Similarity=0.161 Sum_probs=0.0
Q ss_pred chhHhHHHHhccCCCCc--EEEEecccchHHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEE
Q 015225 37 PMIQHPISACKRIPNLA--QIFLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILL 114 (411)
Q Consensus 37 pli~~~l~~l~~~~gi~--~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~ 114 (411)
..|..+|+.+..+ ... +|+||-....+...+.+++..+.++..+.++......|.+++.-.+++... .+.++++
T Consensus 15 ~~L~~~L~Sll~Q-t~~~~EIIVVDDgStD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~---gdyI~fl 90 (729)
T 3l7i_A 15 EYITGCLESIKQQ-RTQDFNLIIVNDGSTDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVE---TPYFMFL 90 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhC-CCCCeEEEEEECCCCCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhcc---CCEEEEE
Confidence 3555566665554 222 355553333344445555543333456777776656788888877777664 5788899
Q ss_pred cCCccc-CCChHHHHHHHH
Q 015225 115 NCDVCC-SFPLPDLLEAHK 132 (411)
Q Consensus 115 ~~D~i~-~~~l~~~l~~~~ 132 (411)
.+|... +.-+..+++...
T Consensus 91 D~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 91 DADDELASYAITFYLEKFN 109 (729)
T ss_dssp -------------------
T ss_pred CCCCCCChhHHHHHHHHhc
Confidence 999986 444777777665
No 183
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=46.76 E-value=69 Score=33.18 Aligned_cols=100 Identities=18% Similarity=0.208 Sum_probs=59.4
Q ss_pred CcccCCcc--hhHhHHHHhccCCCCc---EEEEecccchHHH---------------HHHHhhhcccCCcceEEeeCCC-
Q 015225 30 LFPLAGQP--MIQHPISACKRIPNLA---QIFLIGFYEEREF---------------ALYVSSISNELKVPVRYLKEDK- 88 (411)
Q Consensus 30 llpi~g~p--li~~~l~~l~~~~gi~---~I~Iv~~~~~~~i---------------~~~~~~~~~~~~~~i~~v~~~~- 88 (411)
++|.-|.+ ++..+++.+.+....+ +|+|+.....+.. .+.++...++. .+.++...+
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~--~v~~i~~~~~ 222 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCREL--GVVYSTRERN 222 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH--TCEEEECSSC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhc--CcEEEEecCC
Confidence 56776764 5689999997652222 5777765332221 11222211222 345544333
Q ss_pred CCCChHHHHHHHHHhhccCCCeEEEEcCCcccCCC-hHHHHHHHHhc
Q 015225 89 PHGSAGGLYYFRDMIMEENPSHIILLNCDVCCSFP-LPDLLEAHKRY 134 (411)
Q Consensus 89 ~~g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~~ 134 (411)
..|-++++..+.+... .+.++++.+|+....+ +..++....+.
T Consensus 223 ~~GKa~alN~gl~~a~---gd~Il~lDaD~~~~pd~L~~lv~~~~~d 266 (802)
T 4hg6_A 223 EHAKAGNMSAALERLK---GELVVVFDADHVPSRDFLARTVGYFVED 266 (802)
T ss_dssp CSHHHHHHHHHHHHCC---CSEEEECCTTEEECTTHHHHHHHHHHHS
T ss_pred CCcchHHHHHHHHhcC---CCEEEEECCCCCcChHHHHHHHHHHhcC
Confidence 3466777877777664 5888899999987544 78888877543
No 184
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=36.58 E-value=1.6e+02 Score=23.53 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=56.7
Q ss_pred CcchhHhHHHHhccCCCCcEEEEecccchHHHHHHHhhhcccCCcceEEeeCCCCCCChHHHHHHHHHhhccCCCeEEEE
Q 015225 35 GQPMIQHPISACKRIPNLAQIFLIGFYEEREFALYVSSISNELKVPVRYLKEDKPHGSAGGLYYFRDMIMEENPSHIILL 114 (411)
Q Consensus 35 g~pli~~~l~~l~~~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~~~~i~~v~~~~~~g~~~~l~~~~~~i~~~~~~~~lv~ 114 (411)
+..-++...+.+.++ ++|++++......+..++.....+.+..+..+.. ..+.+......+. .++++++
T Consensus 25 ~~~~l~~~~~~i~~a---~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~-----~~~~~~~~~~~~~---~~d~~i~ 93 (187)
T 3sho_A 25 QPEAIEAAVEAICRA---DHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTE-----GGSTLTITLANLR---PTDLMIG 93 (187)
T ss_dssp CHHHHHHHHHHHHHC---SEEEEECCGGGHHHHHHHHHHHHHTTCCEEEECC-----CTHHHHHHHHTCC---TTEEEEE
T ss_pred CHHHHHHHHHHHHhC---CEEEEEecCchHHHHHHHHHHHHhcCCCEEEecC-----CchhHHHHHhcCC---CCCEEEE
Confidence 445677788888875 6899987655555556655433445666666541 2233333333343 5666666
Q ss_pred cCCcccCCChHHHHHHHHhcCCeeEEEEEe
Q 015225 115 NCDVCCSFPLPDLLEAHKRYGGMGTMLVIK 144 (411)
Q Consensus 115 ~~D~i~~~~l~~~l~~~~~~~~~~~~~~~~ 144 (411)
-+-.-...++..+++..++.+... ++.+.
T Consensus 94 iS~sG~t~~~~~~~~~ak~~g~~v-i~IT~ 122 (187)
T 3sho_A 94 VSVWRYLRDTVAALAGAAERGVPT-MALTD 122 (187)
T ss_dssp ECCSSCCHHHHHHHHHHHHTTCCE-EEEES
T ss_pred EeCCCCCHHHHHHHHHHHHCCCCE-EEEeC
Confidence 444333445666777777777774 44444
No 185
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=35.22 E-value=23 Score=33.20 Aligned_cols=111 Identities=13% Similarity=0.075 Sum_probs=60.1
Q ss_pred CcccCCc-chhHhHHHHhcc----CCCCcEEEEecccchHHHHHHHhhhcccC-CcceEEeeCCCCCCChHHHHHHHHHh
Q 015225 30 LFPLAGQ-PMIQHPISACKR----IPNLAQIFLIGFYEEREFALYVSSISNEL-KVPVRYLKEDKPHGSAGGLYYFRDMI 103 (411)
Q Consensus 30 llpi~g~-pli~~~l~~l~~----~~gi~~I~Iv~~~~~~~i~~~~~~~~~~~-~~~i~~v~~~~~~g~~~~l~~~~~~i 103 (411)
.+|.-|. ..|..+|+.+.. .+..-+|+||-....+...+.+++...+. ...+.++......|-+.++..+.+..
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n~G~~~A 178 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMWRALSVT 178 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHHHHTTTC
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHHHHHHhc
Confidence 4444444 566666666643 21234666664433333344444421110 00111122234567788887777655
Q ss_pred hccCCCeEEEEcCCcc-c-CCChHHHHHHHHhc-CCeeEEEEE
Q 015225 104 MEENPSHIILLNCDVC-C-SFPLPDLLEAHKRY-GGMGTMLVI 143 (411)
Q Consensus 104 ~~~~~~~~lv~~~D~i-~-~~~l~~~l~~~~~~-~~~~~~~~~ 143 (411)
. .+.++++.+|.. . +..+..+++...+. +.+++....
T Consensus 179 ~---gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 179 R---GDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp C---SSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred C---CCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 3 577888899998 5 44578888877654 566555543
No 186
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=33.47 E-value=34 Score=30.03 Aligned_cols=17 Identities=18% Similarity=0.346 Sum_probs=12.1
Q ss_pred CCceEEEEEecCCCCCcccc
Q 015225 1 MEKVVAVIMVGGPTKGTRFR 20 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~ 20 (411)
|+..++|+|++ .|||..
T Consensus 6 ~~~~~aillv~---hGS~~~ 22 (269)
T 2xvy_A 6 KAQKTGILLVA---FGTSVE 22 (269)
T ss_dssp --CCEEEEEEE---CCCCCT
T ss_pred CCCCceEEEEe---CCCCcH
Confidence 55568999988 889864
No 187
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=31.73 E-value=1.8e+02 Score=24.75 Aligned_cols=40 Identities=15% Similarity=-0.068 Sum_probs=27.7
Q ss_pred CChHHHHHHHHHhhccCCCeEEEEcCCcccCCC-hHHHHHHHHh
Q 015225 91 GSAGGLYYFRDMIMEENPSHIILLNCDVCCSFP-LPDLLEAHKR 133 (411)
Q Consensus 91 g~~~~l~~~~~~i~~~~~~~~lv~~~D~i~~~~-l~~~l~~~~~ 133 (411)
|.+.+.-.+++.-. .+.+++++.|+..+.+ +..+++...+
T Consensus 61 g~a~a~N~Gi~~A~---g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 61 HGFSWHKQMLPRCK---GRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CTTTHHHHHGGGCC---SSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred cHHHHHHHHHHhcC---CCEEEEECCCcccCccHHHHHHHHHHh
Confidence 55566655555443 5889999999987544 7888776654
No 188
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=20.09 E-value=52 Score=24.95 Aligned_cols=54 Identities=11% Similarity=0.218 Sum_probs=31.2
Q ss_pred CCceEEEEEecCCCCCcccccCCC-----------CCCc-cCcccC-CcchhHhHHHHhccCCCCcEEEEe
Q 015225 1 MEKVVAVIMVGGPTKGTRFRPLSF-----------NTPK-PLFPLA-GQPMIQHPISACKRIPNLAQIFLI 58 (411)
Q Consensus 1 m~~~~aiIla~G~~~g~rl~plt~-----------~~pK-~llpi~-g~pli~~~l~~l~~~~gi~~I~Iv 58 (411)
|....+|||.| .|||-..-.. ..+. ..--+. +.|-++-.++.|... |.++|+|+
T Consensus 2 m~~~~alllv~---HGS~~~~~~~~~~~l~~~l~~~~~~V~~a~le~~~P~l~~~l~~l~~~-G~~~vvvv 68 (126)
T 3lyh_A 2 MTQPHQIILLA---HGSSDARWCETFEKLAEPTVESIENAAIAYMELAEPSLDTIVNRAKGQ-GVEQFTVV 68 (126)
T ss_dssp ---CEEEEEEE---CCCSCHHHHHHHHHHHHHHHHHSTTCEEEESSSSSSBHHHHHHHHHHT-TCCEEEEE
T ss_pred CCCCcEEEEEe---CCCCCHHHHHHHHHHHHHHHhhcCCEEEEEEeCCCCCHHHHHHHHHHc-CCCEEEEE
Confidence 55667888888 7887521000 0011 111122 668888888888885 88888775
Done!