Query 015229
Match_columns 411
No_of_seqs 132 out of 430
Neff 6.7
Searched_HMMs 13730
Date Mon Mar 25 08:57:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015229.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015229hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2g84a1 c.97.1.2 (A:1-189) Put 68.6 4.3 0.00031 34.3 6.3 43 35-88 48-90 (189)
2 d1wkqa_ c.97.1.2 (A:) Guanine 50.3 4.7 0.00034 32.9 3.1 15 74-88 54-68 (158)
3 d1wwra1 c.97.1.2 (A:1-151) tRN 29.4 19 0.0014 28.6 3.5 15 131-145 73-87 (151)
4 d2a8na1 c.97.1.2 (A:2-131) Cyt 26.3 17 0.0012 28.2 2.6 14 132-145 74-87 (130)
5 d1p6oa_ c.97.1.2 (A:) Cytosine 22.0 11 0.00084 30.4 0.7 15 131-145 80-94 (156)
6 d1bdsa_ g.9.1.1 (A:) BDs-I def 21.8 11 0.0008 23.0 0.4 7 196-202 8-14 (43)
7 d2cqea1 g.66.1.1 (A:458-513) Z 19.0 41 0.003 22.3 2.9 29 53-81 7-35 (56)
8 d1qr0a1 d.150.1.1 (A:1-101) 4' 18.6 36 0.0026 24.8 3.0 46 79-137 45-90 (101)
9 d1nbja_ g.3.3.2 (A:) Cycloviol 18.4 6.4 0.00047 22.5 -1.2 10 205-214 16-25 (30)
10 d2b3ja1 c.97.1.2 (A:1-151) tRN 17.4 41 0.003 26.3 3.2 14 131-144 74-87 (151)
No 1
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=68.62 E-value=4.3 Score=34.25 Aligned_cols=43 Identities=26% Similarity=0.212 Sum_probs=22.6
Q ss_pred EEEEEEeeCCCCeEEEEEecCCCccCCCccCCCCCcccchHHHHHHHHHHHHHH
Q 015229 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLRFF 88 (411)
Q Consensus 35 lA~iV~~~~~~~~~vvslgTG~Kc~~~~~l~~~G~~lhD~HAEVLARR~f~r~L 88 (411)
++|+|+.. ++-+||+-|.-.. ...|+.. -||||+|.|-.-+.+
T Consensus 48 ~GaviV~~--~~g~Iia~g~N~~-------~~~~dpt--~HAEi~AI~~A~~~~ 90 (189)
T d2g84a1 48 FAAAVFER--DSGLLIAAGTNRV-------VPGRCSA--AHAEILALSLAQAKL 90 (189)
T ss_dssp CEEEEEET--TTCBEEEEEECCT-------TTTTCTT--CCHHHHHHHHHHHHH
T ss_pred EEEEEEEC--CCCEEEEEEcCCc-------CcCCCCc--ccHHHHHHHHHHHHh
Confidence 45555432 3457888664321 1122111 199999987654433
No 2
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=50.28 E-value=4.7 Score=32.90 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHHHHH
Q 015229 74 SHAEIVARRALLRFF 88 (411)
Q Consensus 74 ~HAEVLARR~f~r~L 88 (411)
.|||++|.|...+-|
T Consensus 54 ~HAE~~ai~~a~~~~ 68 (158)
T d1wkqa_ 54 AHAEVTAIRKACKVL 68 (158)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc
Confidence 599999999765544
No 3
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=29.40 E-value=19 Score=28.63 Aligned_cols=15 Identities=33% Similarity=0.560 Sum_probs=11.6
Q ss_pred EEEEeccCCCCcccc
Q 015229 131 LHLYISQLPCGDASL 145 (411)
Q Consensus 131 ~hLYiS~~PCGDAsi 145 (411)
.-||+|-.||--++.
T Consensus 73 ~tlY~TlEPC~mC~~ 87 (151)
T d1wwra1 73 CELYVTLEPCIMCSY 87 (151)
T ss_dssp EEEEESSCCBHHHHH
T ss_pred cEeeecccCCcHHHH
Confidence 458999999976544
No 4
>d2a8na1 c.97.1.2 (A:2-131) Cytidine and deoxycytidylate deaminase CodA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=26.27 E-value=17 Score=28.20 Aligned_cols=14 Identities=29% Similarity=0.662 Sum_probs=11.0
Q ss_pred EEEeccCCCCcccc
Q 015229 132 HLYISQLPCGDASL 145 (411)
Q Consensus 132 hLYiS~~PCGDAsi 145 (411)
-||+|..||--++.
T Consensus 74 tly~T~EPC~mC~~ 87 (130)
T d2a8na1 74 DLYVTLEPCTMCAA 87 (130)
T ss_dssp EEEEEECCBHHHHH
T ss_pred EEecccccCHHHHH
Confidence 58999999966554
No 5
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.95 E-value=11 Score=30.35 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=11.5
Q ss_pred EEEEeccCCCCcccc
Q 015229 131 LHLYISQLPCGDASL 145 (411)
Q Consensus 131 ~hLYiS~~PCGDAsi 145 (411)
.-||+|..||-.++.
T Consensus 80 ~tlyvTlEPC~mC~~ 94 (156)
T d1p6oa_ 80 TTLYTTLSPCDMCTG 94 (156)
T ss_dssp EEEEEEECCCHHHHH
T ss_pred eEEEeeccCCHHHHH
Confidence 358999999966544
No 6
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=21.79 E-value=11 Score=22.97 Aligned_cols=7 Identities=86% Similarity=1.540 Sum_probs=5.9
Q ss_pred cCCCCCC
Q 015229 196 RKPGRGD 202 (411)
Q Consensus 196 tKPGRgd 202 (411)
.||||||
T Consensus 8 gkpgrgd 14 (43)
T d1bdsa_ 8 GKPGRGD 14 (43)
T ss_dssp SCCSCCE
T ss_pred CCCCCCc
Confidence 4899998
No 7
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.98 E-value=41 Score=22.34 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=20.8
Q ss_pred ecCCCccCCCccCCCCCcccchHHHHHHH
Q 015229 53 GTGTKCIGRSLLSPHGDIVNDSHAEIVAR 81 (411)
Q Consensus 53 gTG~Kc~~~~~l~~~G~~lhD~HAEVLAR 81 (411)
=||+||+.++.=...=.-|.|---|+|++
T Consensus 7 Htg~kCy~gd~C~FSH~pLt~~t~~lL~K 35 (56)
T d2cqea1 7 HTTGNCINGDDCMFSHDPLTEETRELLDK 35 (56)
T ss_dssp HHTSCCSSCTTCSSBCCCCCHHHHHHHHH
T ss_pred ecCCcccCCCcccccCCccCHHHHHHHHH
Confidence 38999998875443336888877777664
No 8
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=18.63 E-value=36 Score=24.79 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCcccccCCCCCeeeeeCCCCceEeeCCcEEEEEecc
Q 015229 79 VARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQ 137 (411)
Q Consensus 79 LARR~f~r~Ly~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~Lk~~v~~hLYiS~ 137 (411)
|+-|.++|+++.+.... ....+.|..++.||=.|...-.+||=||+
T Consensus 45 l~~r~llr~~l~~~~~~-------------~p~~i~~~~~~~GKP~l~~~~~i~FNiSH 90 (101)
T d1qr0a1 45 LLGDVLVRSVISRQYQL-------------DKSDIRFSTQEYGKPCIPDLPDAHFNISH 90 (101)
T ss_dssp HHHHHHHHHHHHHHTTC-------------CGGGCCCEECTTSCEECTTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCC-------------CccceeEEeCCCCCccccCCCCcEEEecc
Confidence 44566667776544322 11345567777786666544446666666
No 9
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=18.40 E-value=6.4 Score=22.49 Aligned_cols=10 Identities=40% Similarity=0.959 Sum_probs=7.1
Q ss_pred ceechhhHHH
Q 015229 205 LSVSCSDKIA 214 (411)
Q Consensus 205 ~SmSCSDKLa 214 (411)
+--|||||.+
T Consensus 16 lgc~c~~kvc 25 (30)
T d1nbja_ 16 LGCSCSNRVC 25 (30)
T ss_dssp TTCEEETTEE
T ss_pred ecccccCcee
Confidence 3458999875
No 10
>d2b3ja1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Staphylococcus aureus [TaxId: 1280]}
Probab=17.35 E-value=41 Score=26.32 Aligned_cols=14 Identities=29% Similarity=0.586 Sum_probs=10.7
Q ss_pred EEEEeccCCCCccc
Q 015229 131 LHLYISQLPCGDAS 144 (411)
Q Consensus 131 ~hLYiS~~PCGDAs 144 (411)
.-||+|..||--++
T Consensus 74 ~~ly~t~ePC~mC~ 87 (151)
T d2b3ja1 74 CTLYVTLEPCVMCA 87 (151)
T ss_dssp EEEEEEECCCHHHH
T ss_pred CeEEEeccchhhhh
Confidence 45899999996544
Done!