Query 015230
Match_columns 411
No_of_seqs 148 out of 1899
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 04:20:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015230.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015230hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0001 HemL Glutamate-1-semia 100.0 2.4E-70 5.2E-75 491.6 44.9 411 1-411 18-429 (432)
2 COG4992 ArgD Ornithine/acetylo 100.0 9.1E-71 2E-75 489.2 36.5 372 12-410 18-398 (404)
3 COG0160 GabT 4-aminobutyrate a 100.0 2.9E-66 6.3E-71 475.0 39.1 392 10-411 31-446 (447)
4 PLN02482 glutamate-1-semialdeh 100.0 2E-64 4.4E-69 478.7 45.0 411 1-411 64-474 (474)
5 PRK12389 glutamate-1-semialdeh 100.0 5.4E-63 1.2E-67 468.8 46.4 410 1-411 17-428 (428)
6 PRK00615 glutamate-1-semialdeh 100.0 6.5E-61 1.4E-65 451.6 44.4 407 1-411 18-429 (433)
7 COG0161 BioA Adenosylmethionin 100.0 1.5E-61 3.1E-66 440.7 36.2 402 5-410 13-443 (449)
8 KOG1404 Alanine-glyoxylate ami 100.0 1.1E-60 2.5E-65 415.0 36.1 386 13-404 27-432 (442)
9 TIGR00713 hemL glutamate-1-sem 100.0 2.8E-59 6E-64 446.2 47.4 411 1-411 13-423 (423)
10 PRK00062 glutamate-1-semialdeh 100.0 8.8E-59 1.9E-63 440.6 46.5 411 1-411 15-425 (426)
11 PRK07046 aminotransferase; Val 100.0 1.3E-58 2.9E-63 438.9 45.7 403 1-411 41-451 (453)
12 PRK06062 hypothetical protein; 100.0 1.4E-58 3.1E-63 439.6 41.5 392 17-411 34-446 (451)
13 PRK11522 putrescine--2-oxoglut 100.0 1.6E-58 3.5E-63 438.5 41.0 373 17-410 62-451 (459)
14 PRK05965 hypothetical protein; 100.0 1.7E-58 3.8E-63 439.9 40.5 391 18-411 28-448 (459)
15 TIGR03372 putres_am_tran putre 100.0 2.4E-58 5.2E-63 434.2 40.6 369 19-408 58-442 (442)
16 PRK07481 hypothetical protein; 100.0 2.2E-58 4.7E-63 438.5 40.6 403 5-411 10-446 (449)
17 PRK07678 aminotransferase; Val 100.0 2.7E-58 5.8E-63 438.2 41.0 389 18-411 29-450 (451)
18 PRK07482 hypothetical protein; 100.0 2.2E-58 4.8E-63 439.4 39.9 389 18-410 32-454 (461)
19 PLN02760 4-aminobutyrate:pyruv 100.0 2.6E-57 5.6E-62 434.0 41.0 403 4-410 56-491 (504)
20 PRK06931 diaminobutyrate--2-ox 100.0 1.5E-57 3.3E-62 432.9 38.8 390 17-410 39-454 (459)
21 PRK06058 4-aminobutyrate amino 100.0 2.7E-57 5.8E-62 431.8 40.4 379 18-411 38-443 (443)
22 KOG1401 Acetylornithine aminot 100.0 1.7E-57 3.7E-62 398.4 35.7 399 1-411 21-431 (433)
23 PRK07483 hypothetical protein; 100.0 3.5E-57 7.6E-62 429.1 40.9 391 18-410 12-437 (443)
24 PRK06943 adenosylmethionine--8 100.0 2.5E-57 5.5E-62 430.7 39.6 383 18-410 36-446 (453)
25 PRK07030 adenosylmethionine--8 100.0 3.1E-57 6.7E-62 431.1 39.9 387 19-411 30-447 (466)
26 PRK06938 diaminobutyrate--2-ox 100.0 3.2E-57 6.9E-62 430.8 39.9 389 17-410 44-460 (464)
27 PRK07495 4-aminobutyrate amino 100.0 9.1E-57 2E-61 424.5 42.7 377 19-411 23-422 (425)
28 PRK06916 adenosylmethionine--8 100.0 1.1E-56 2.4E-61 427.7 40.5 390 18-411 38-456 (460)
29 PRK08593 4-aminobutyrate amino 100.0 1.7E-56 3.6E-61 425.2 41.4 386 18-411 24-430 (445)
30 PRK08742 adenosylmethionine--8 100.0 1.6E-56 3.5E-61 425.8 41.2 388 19-410 47-467 (472)
31 PRK04612 argD acetylornithine 100.0 2.2E-56 4.9E-61 419.6 41.4 372 16-410 20-403 (408)
32 TIGR00709 dat 2,4-diaminobutyr 100.0 8.6E-57 1.9E-61 427.7 38.5 389 18-410 21-435 (442)
33 PRK06541 hypothetical protein; 100.0 2.2E-56 4.8E-61 425.1 41.3 404 5-410 20-455 (460)
34 PRK06105 aminotransferase; Pro 100.0 2.6E-56 5.7E-61 425.1 41.4 387 18-410 30-449 (460)
35 PRK07986 adenosylmethionine--8 100.0 1.2E-56 2.6E-61 422.5 38.4 377 19-410 26-423 (428)
36 PRK07480 putative aminotransfe 100.0 4.6E-56 1E-60 422.4 41.3 387 18-410 32-448 (456)
37 PRK07036 hypothetical protein; 100.0 4.3E-56 9.3E-61 423.8 41.0 389 18-410 33-452 (466)
38 PRK05639 4-aminobutyrate amino 100.0 5.1E-56 1.1E-60 421.8 41.2 382 18-410 35-443 (457)
39 PRK06917 hypothetical protein; 100.0 6.6E-56 1.4E-60 420.8 41.2 390 18-410 14-437 (447)
40 PRK12403 putative aminotransfe 100.0 7.1E-56 1.5E-60 422.1 41.5 391 18-411 36-453 (460)
41 TIGR03246 arg_catab_astC succi 100.0 8.1E-56 1.7E-60 417.6 41.3 370 17-411 16-396 (397)
42 PRK06777 4-aminobutyrate amino 100.0 1.3E-55 2.9E-60 417.4 42.6 374 19-409 23-420 (421)
43 PRK13360 omega amino acid--pyr 100.0 1.3E-55 2.9E-60 418.2 40.8 384 18-411 28-441 (442)
44 PRK08117 4-aminobutyrate amino 100.0 2.5E-55 5.5E-60 418.6 41.7 383 19-411 26-430 (433)
45 PRK09792 4-aminobutyrate trans 100.0 2E-55 4.3E-60 416.3 40.5 375 19-409 23-420 (421)
46 PRK08360 4-aminobutyrate amino 100.0 2E-55 4.3E-60 417.1 40.4 386 17-410 22-426 (443)
47 PRK09221 beta alanine--pyruvat 100.0 1.8E-55 3.9E-60 417.6 40.0 385 17-411 30-444 (445)
48 TIGR00700 GABAtrnsam 4-aminobu 100.0 4.2E-55 9.2E-60 415.1 41.9 383 18-409 15-419 (420)
49 PRK05769 4-aminobutyrate amino 100.0 2E-55 4.3E-60 417.3 39.4 382 18-411 36-440 (441)
50 KOG1402 Ornithine aminotransfe 100.0 1.2E-56 2.7E-61 380.7 27.5 370 19-409 42-426 (427)
51 PRK06082 4-aminobutyrate amino 100.0 3.7E-55 8.1E-60 416.6 40.2 383 18-411 54-452 (459)
52 PRK05964 adenosylmethionine--8 100.0 3.9E-55 8.5E-60 416.0 40.2 377 18-411 24-423 (423)
53 PRK12381 bifunctional succinyl 100.0 4.6E-55 9.9E-60 413.7 40.1 369 17-410 20-399 (406)
54 PRK06173 adenosylmethionine--8 100.0 5.5E-55 1.2E-59 411.9 38.2 376 20-410 28-425 (429)
55 PRK03715 argD acetylornithine 100.0 9.5E-55 2.1E-59 407.8 38.4 374 4-411 7-394 (395)
56 PRK05630 adenosylmethionine--8 100.0 7E-55 1.5E-59 410.8 37.5 376 17-410 21-420 (422)
57 TIGR02407 ectoine_ectB diamino 100.0 1E-54 2.2E-59 410.3 38.3 369 18-410 17-412 (412)
58 PLN00144 acetylornithine trans 100.0 1E-54 2.2E-59 406.6 37.8 362 22-411 1-381 (382)
59 PRK04013 argD acetylornithine/ 100.0 1E-54 2.2E-59 400.4 36.5 353 17-411 5-361 (364)
60 PRK06918 4-aminobutyrate amino 100.0 4.1E-54 8.9E-59 411.2 40.8 385 18-410 36-443 (451)
61 PRK06148 hypothetical protein; 100.0 2.8E-54 6.1E-59 444.0 42.0 386 17-411 605-1011(1013)
62 PRK09264 diaminobutyrate--2-ox 100.0 2.8E-54 6.1E-59 409.3 37.3 369 18-410 21-416 (425)
63 PRK06209 glutamate-1-semialdeh 100.0 7.1E-53 1.5E-57 399.6 41.6 386 1-410 12-405 (431)
64 TIGR00699 GABAtrns_euk 4-amino 100.0 2.7E-53 5.9E-58 400.0 38.4 371 17-408 39-464 (464)
65 PRK01278 argD acetylornithine 100.0 5.4E-53 1.2E-57 399.0 39.8 366 17-411 12-389 (389)
66 PRK08297 L-lysine aminotransfe 100.0 1.4E-52 3.1E-57 397.6 38.3 375 20-411 28-442 (443)
67 PRK05093 argD bifunctional N-s 100.0 3.3E-52 7.1E-57 394.8 40.6 370 17-411 21-401 (403)
68 PLN02624 ornithine-delta-amino 100.0 6.7E-52 1.5E-56 396.7 42.0 373 18-410 57-444 (474)
69 PRK06149 hypothetical protein; 100.0 4.9E-52 1.1E-56 427.7 41.4 384 18-410 567-970 (972)
70 PRK04073 rocD ornithine--oxo-a 100.0 6.9E-52 1.5E-56 391.7 37.8 362 17-409 21-396 (396)
71 TIGR00508 bioA adenosylmethion 100.0 4.1E-51 8.9E-56 386.7 37.8 377 19-410 28-426 (427)
72 PRK02936 argD acetylornithine 100.0 1.5E-50 3.1E-55 381.3 39.8 363 17-408 10-377 (377)
73 PRK03244 argD acetylornithine 100.0 1.5E-50 3.2E-55 383.8 39.6 364 18-411 25-395 (398)
74 TIGR03251 LAT_fam L-lysine 6-t 100.0 5.1E-51 1.1E-55 386.9 35.2 374 16-406 15-430 (431)
75 PRK08088 4-aminobutyrate amino 100.0 6.7E-50 1.5E-54 380.4 42.4 381 18-410 23-423 (425)
76 PF00202 Aminotran_3: Aminotra 100.0 1E-51 2.2E-56 379.9 28.8 316 21-346 1-338 (339)
77 cd00610 OAT_like Acetyl ornith 100.0 1.2E-49 2.6E-54 380.5 40.9 379 17-408 17-413 (413)
78 PLN02974 adenosylmethionine-8- 100.0 2.2E-49 4.7E-54 393.4 40.4 397 5-408 325-816 (817)
79 PRK02627 acetylornithine amino 100.0 7E-49 1.5E-53 372.8 38.8 366 17-411 20-395 (396)
80 KOG1403 Predicted alanine-glyo 100.0 2.5E-50 5.5E-55 338.2 23.2 386 17-410 28-437 (452)
81 TIGR01885 Orn_aminotrans ornit 100.0 4.3E-48 9.4E-53 366.6 39.1 368 18-408 19-400 (401)
82 PTZ00125 ornithine aminotransf 100.0 5.7E-48 1.2E-52 366.7 40.0 371 17-411 12-396 (400)
83 PRK00854 rocD ornithine--oxo-a 100.0 1.4E-47 3E-52 363.8 39.7 364 18-409 23-400 (401)
84 PRK04260 acetylornithine amino 100.0 1.4E-47 3.1E-52 360.1 38.5 360 18-408 11-375 (375)
85 TIGR00707 argD acetylornithine 100.0 8.7E-45 1.9E-49 342.9 37.6 362 17-408 8-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 9.8E-38 2.1E-42 268.0 25.8 369 21-411 61-484 (484)
87 PLN02822 serine palmitoyltrans 100.0 5.4E-35 1.2E-39 280.4 30.9 347 19-410 93-477 (481)
88 PRK07505 hypothetical protein; 100.0 1.6E-33 3.5E-38 267.2 33.6 340 18-410 28-399 (402)
89 COG0156 BioF 7-keto-8-aminopel 100.0 8.9E-33 1.9E-37 252.0 31.4 329 27-407 31-387 (388)
90 PLN02955 8-amino-7-oxononanoat 100.0 1.5E-32 3.3E-37 256.0 31.2 326 35-410 101-461 (476)
91 TIGR01821 5aminolev_synth 5-am 100.0 7.7E-32 1.7E-36 256.0 31.8 329 33-411 42-397 (402)
92 PRK13393 5-aminolevulinate syn 100.0 1.3E-31 2.8E-36 254.5 31.9 327 34-410 43-396 (406)
93 PRK09064 5-aminolevulinate syn 100.0 4.5E-31 9.7E-36 251.3 32.0 327 35-411 45-398 (407)
94 COG0436 Aspartate/tyrosine/aro 100.0 4.1E-31 9E-36 246.6 28.6 333 36-410 28-391 (393)
95 TIGR01822 2am3keto_CoA 2-amino 100.0 7.6E-30 1.7E-34 242.1 33.6 341 19-410 21-389 (393)
96 PRK05958 8-amino-7-oxononanoat 100.0 5.2E-30 1.1E-34 242.9 32.4 335 21-408 25-385 (385)
97 PRK06939 2-amino-3-ketobutyrat 100.0 1.2E-29 2.5E-34 241.5 32.8 341 20-411 26-394 (397)
98 TIGR01825 gly_Cac_T_rel pyrido 100.0 2E-29 4.3E-34 238.7 33.5 340 18-410 16-381 (385)
99 PRK07179 hypothetical protein; 100.0 1.9E-29 4.1E-34 239.9 33.0 321 34-410 52-398 (407)
100 PLN03227 serine palmitoyltrans 100.0 1.1E-29 2.3E-34 238.8 28.9 330 39-410 1-382 (392)
101 COG1168 MalY Bifunctional PLP- 100.0 3.3E-29 7.1E-34 219.8 27.4 352 18-410 5-386 (388)
102 PRK13392 5-aminolevulinate syn 100.0 7.3E-29 1.6E-33 236.1 31.6 328 34-411 44-398 (410)
103 TIGR00858 bioF 8-amino-7-oxono 100.0 3.4E-28 7.4E-33 228.4 31.7 332 22-405 3-360 (360)
104 PRK07682 hypothetical protein; 100.0 1.7E-28 3.7E-33 231.4 27.7 333 37-411 21-377 (378)
105 PRK07681 aspartate aminotransf 100.0 1.7E-28 3.6E-33 232.8 27.6 331 34-406 30-384 (399)
106 PLN00175 aminotransferase fami 100.0 4.2E-28 9E-33 230.2 28.6 335 35-410 53-413 (413)
107 PRK06225 aspartate aminotransf 100.0 1.3E-27 2.7E-32 225.5 31.0 334 34-411 26-377 (380)
108 PRK07366 succinyldiaminopimela 100.0 5.9E-28 1.3E-32 228.4 27.8 335 34-408 28-388 (388)
109 PRK06207 aspartate aminotransf 100.0 1.2E-27 2.6E-32 226.8 28.7 338 36-410 39-402 (405)
110 PRK03317 histidinol-phosphate 100.0 8.7E-28 1.9E-32 225.7 27.5 320 37-409 27-363 (368)
111 PRK08068 transaminase; Reviewe 100.0 1.3E-27 2.8E-32 226.0 27.3 332 34-407 30-386 (389)
112 KOG0257 Kynurenine aminotransf 100.0 2.1E-28 4.6E-33 216.9 19.9 332 53-405 45-414 (420)
113 PLN02483 serine palmitoyltrans 100.0 1.2E-26 2.5E-31 223.4 33.1 326 34-410 98-466 (489)
114 PRK15481 transcriptional regul 100.0 2.1E-27 4.6E-32 227.4 27.7 327 37-410 86-431 (431)
115 PRK07324 transaminase; Validat 100.0 8E-28 1.7E-32 225.6 24.3 338 30-410 20-370 (373)
116 PRK06290 aspartate aminotransf 100.0 2.6E-27 5.6E-32 224.2 27.7 343 34-411 42-406 (410)
117 KOG1359 Glycine C-acetyltransf 100.0 8E-27 1.7E-31 196.3 27.1 335 19-409 49-411 (417)
118 PRK09276 LL-diaminopimelate am 100.0 2.8E-27 6.1E-32 223.6 27.5 331 34-406 29-384 (385)
119 KOG0259 Tyrosine aminotransfer 100.0 3.2E-27 6.8E-32 205.8 25.3 341 36-410 61-433 (447)
120 PRK08636 aspartate aminotransf 100.0 4.5E-27 9.7E-32 223.2 28.7 341 34-410 31-400 (403)
121 TIGR03540 DapC_direct LL-diami 100.0 3.2E-27 6.9E-32 223.1 27.3 331 34-406 27-382 (383)
122 PRK05942 aspartate aminotransf 100.0 4.3E-27 9.3E-32 222.8 27.9 332 34-407 33-389 (394)
123 PRK08960 hypothetical protein; 100.0 1.1E-26 2.4E-31 219.6 30.4 333 34-409 30-386 (387)
124 PRK06108 aspartate aminotransf 100.0 5.5E-27 1.2E-31 221.8 28.2 333 36-409 24-381 (382)
125 PRK09147 succinyldiaminopimela 100.0 8E-27 1.7E-31 221.2 29.0 331 34-409 27-395 (396)
126 PRK13355 bifunctional HTH-doma 100.0 3.3E-27 7.1E-32 230.3 26.9 340 34-410 144-514 (517)
127 PRK06348 aspartate aminotransf 100.0 7E-27 1.5E-31 220.6 28.2 332 36-407 29-382 (384)
128 PRK09148 aminotransferase; Val 100.0 4.6E-27 9.9E-32 223.0 27.0 338 34-410 28-390 (405)
129 PRK07309 aromatic amino acid a 100.0 1.2E-26 2.7E-31 219.3 29.8 338 36-411 30-389 (391)
130 PRK06855 aminotransferase; Val 100.0 3.4E-27 7.5E-32 225.3 25.7 350 34-410 30-429 (433)
131 PRK08175 aminotransferase; Val 100.0 9.7E-27 2.1E-31 220.4 28.3 338 34-410 27-389 (395)
132 PRK12414 putative aminotransfe 100.0 6.2E-27 1.3E-31 220.8 26.8 331 36-406 29-383 (384)
133 COG1167 ARO8 Transcriptional r 100.0 1E-26 2.2E-31 222.1 28.5 337 36-410 89-455 (459)
134 PLN02187 rooty/superroot1 100.0 1.4E-26 3.1E-31 221.9 29.6 342 35-410 65-438 (462)
135 COG0079 HisC Histidinol-phosph 100.0 5E-27 1.1E-31 215.3 25.2 319 37-410 23-354 (356)
136 PLN00145 tyrosine/nicotianamin 100.0 7.7E-27 1.7E-31 222.3 27.3 342 35-410 51-424 (430)
137 TIGR03537 DapC succinyldiamino 100.0 1.8E-26 3.9E-31 215.1 28.8 328 38-406 2-349 (350)
138 PRK01533 histidinol-phosphate 100.0 6.2E-27 1.3E-31 218.6 25.3 321 34-409 27-354 (366)
139 PRK07683 aminotransferase A; V 100.0 2.3E-26 4.9E-31 217.2 28.9 333 36-410 28-383 (387)
140 PRK09082 methionine aminotrans 100.0 1E-26 2.2E-31 219.6 26.1 331 35-406 29-385 (386)
141 PLN02656 tyrosine transaminase 100.0 3.3E-26 7.2E-31 217.4 29.7 341 33-410 28-403 (409)
142 PRK08363 alanine aminotransfer 100.0 1.2E-26 2.5E-31 220.3 26.5 343 34-410 28-394 (398)
143 PRK05957 aspartate aminotransf 100.0 2.8E-26 6.2E-31 216.7 28.6 330 37-410 28-385 (389)
144 PRK02731 histidinol-phosphate 100.0 1.4E-26 3E-31 217.7 25.7 323 34-410 30-366 (367)
145 PRK08912 hypothetical protein; 100.0 1.8E-26 3.9E-31 218.2 26.5 334 36-410 26-386 (387)
146 PRK14809 histidinol-phosphate 100.0 1.9E-26 4.2E-31 215.6 26.3 321 34-409 28-356 (357)
147 KOG1360 5-aminolevulinate synt 100.0 7.6E-26 1.6E-30 198.0 27.2 327 36-411 171-525 (570)
148 PLN00143 tyrosine/nicotianamin 100.0 4E-26 8.6E-31 216.7 27.9 341 33-410 29-404 (409)
149 PRK03158 histidinol-phosphate 100.0 2E-26 4.3E-31 215.9 25.5 316 36-407 29-358 (359)
150 PRK00950 histidinol-phosphate 100.0 1.7E-26 3.8E-31 216.6 24.9 320 33-408 31-360 (361)
151 PRK14807 histidinol-phosphate 100.0 6.9E-26 1.5E-30 211.2 28.7 320 37-408 23-350 (351)
152 PRK06107 aspartate aminotransf 100.0 5E-26 1.1E-30 216.0 28.1 345 34-411 31-401 (402)
153 TIGR03538 DapC_gpp succinyldia 100.0 5.8E-26 1.3E-30 215.1 28.1 330 33-407 25-392 (393)
154 PRK08361 aspartate aminotransf 100.0 1.2E-25 2.7E-30 212.7 30.1 336 36-411 33-391 (391)
155 PRK05839 hypothetical protein; 100.0 5.2E-26 1.1E-30 213.6 26.8 326 34-409 22-373 (374)
156 PRK02610 histidinol-phosphate 100.0 3.2E-26 6.8E-31 215.2 25.3 331 36-411 28-372 (374)
157 PRK05937 8-amino-7-oxononanoat 100.0 1.3E-25 2.8E-30 210.7 29.3 314 36-410 4-350 (370)
158 PLN03026 histidinol-phosphate 100.0 4E-26 8.7E-31 214.6 25.6 320 35-407 51-379 (380)
159 cd06454 KBL_like KBL_like; thi 100.0 1.3E-25 2.8E-30 209.9 28.9 322 36-407 1-348 (349)
160 PRK07777 aminotransferase; Val 100.0 5.8E-26 1.3E-30 214.8 26.5 334 36-409 24-385 (387)
161 PRK08153 histidinol-phosphate 100.0 8E-26 1.7E-30 212.0 27.1 322 37-410 33-365 (369)
162 TIGR01141 hisC histidinol-phos 100.0 4.4E-26 9.5E-31 212.6 24.9 314 36-405 19-346 (346)
163 PRK05764 aspartate aminotransf 100.0 1.6E-25 3.5E-30 212.4 29.0 341 34-410 29-391 (393)
164 TIGR01264 tyr_amTase_E tyrosin 99.9 1.8E-25 4E-30 212.3 29.3 343 35-411 30-400 (401)
165 PRK07550 hypothetical protein; 99.9 1.1E-25 2.5E-30 212.7 27.5 333 34-407 27-384 (386)
166 PRK08056 threonine-phosphate d 99.9 7.1E-26 1.5E-30 211.5 25.6 325 33-409 17-354 (356)
167 PTZ00433 tyrosine aminotransfe 99.9 2.7E-25 5.9E-30 211.5 29.6 347 30-410 27-408 (412)
168 PRK07865 N-succinyldiaminopime 99.9 7.3E-26 1.6E-30 212.3 24.4 316 34-405 25-363 (364)
169 PRK09265 aminotransferase AlaT 99.9 2E-25 4.3E-30 212.1 27.6 342 33-410 30-401 (404)
170 PRK06358 threonine-phosphate d 99.9 1.9E-25 4.1E-30 208.3 26.2 319 36-408 19-353 (354)
171 PRK07337 aminotransferase; Val 99.9 2.9E-25 6.3E-30 210.1 27.8 334 35-408 29-387 (388)
172 PRK07590 L,L-diaminopimelate a 99.9 1.2E-25 2.6E-30 213.8 25.0 329 35-408 33-409 (409)
173 PLN02672 methionine S-methyltr 99.9 2.2E-25 4.8E-30 225.4 28.1 353 30-409 691-1079(1082)
174 PTZ00377 alanine aminotransfer 99.9 2.6E-25 5.7E-30 215.2 27.5 334 54-410 90-475 (481)
175 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.6E-25 3.4E-30 206.5 24.4 303 48-408 28-345 (346)
176 PRK04870 histidinol-phosphate 99.9 2.9E-25 6.3E-30 207.7 25.9 321 35-408 25-356 (356)
177 PLN02450 1-aminocyclopropane-1 99.9 5.5E-25 1.2E-29 211.3 27.7 307 73-410 87-430 (468)
178 TIGR03539 DapC_actino succinyl 99.9 2.2E-25 4.8E-30 208.2 24.3 315 34-404 19-356 (357)
179 PRK05387 histidinol-phosphate 99.9 2.8E-25 6E-30 207.8 24.9 321 35-409 23-352 (353)
180 PRK05664 threonine-phosphate d 99.9 1.4E-25 2.9E-30 207.2 22.1 305 36-410 20-328 (330)
181 PRK09257 aromatic amino acid a 99.9 8.7E-26 1.9E-30 214.0 20.8 332 37-408 27-396 (396)
182 PRK06959 putative threonine-ph 99.9 2.5E-25 5.4E-30 205.8 22.3 304 36-410 24-333 (339)
183 PRK06425 histidinol-phosphate 99.9 3.4E-25 7.3E-30 204.8 22.7 302 37-408 17-331 (332)
184 PRK03321 putative aminotransfe 99.9 5.2E-25 1.1E-29 205.7 24.1 319 37-410 23-351 (352)
185 PTZ00376 aspartate aminotransf 99.9 2.4E-25 5.3E-30 211.3 22.0 334 36-410 29-403 (404)
186 PRK06836 aspartate aminotransf 99.9 3.2E-24 7E-29 203.0 29.3 329 35-410 32-391 (394)
187 PLN02376 1-aminocyclopropane-1 99.9 2E-24 4.4E-29 208.0 28.1 307 73-409 95-437 (496)
188 PRK09440 avtA valine--pyruvate 99.9 1.2E-24 2.5E-29 207.9 26.0 340 36-410 30-411 (416)
189 PRK09105 putative aminotransfe 99.9 8.4E-25 1.8E-29 204.7 23.9 318 36-409 43-369 (370)
190 PRK14808 histidinol-phosphate 99.9 1.3E-24 2.8E-29 200.8 24.2 321 23-406 6-333 (335)
191 PLN02607 1-aminocyclopropane-1 99.9 3.3E-24 7.2E-29 204.3 27.6 306 73-410 96-437 (447)
192 PRK07568 aspartate aminotransf 99.9 3.6E-24 7.9E-29 203.5 27.8 333 35-410 29-392 (397)
193 PRK03967 histidinol-phosphate 99.9 1.6E-24 3.5E-29 200.6 24.5 311 34-409 16-333 (337)
194 PRK07392 threonine-phosphate d 99.9 2.3E-24 4.9E-29 201.8 25.7 322 36-409 22-358 (360)
195 PRK01688 histidinol-phosphate 99.9 4.1E-25 8.9E-30 205.7 20.0 309 37-405 29-351 (351)
196 TIGR01265 tyr_nico_aTase tyros 99.9 3.1E-24 6.6E-29 203.8 26.3 343 34-410 29-401 (403)
197 PRK05166 histidinol-phosphate 99.9 2.9E-24 6.3E-29 201.8 24.8 321 35-408 35-369 (371)
198 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.8E-24 4E-29 199.8 21.6 304 35-404 16-329 (330)
199 PF00155 Aminotran_1_2: Aminot 99.9 2.3E-24 4.9E-29 202.6 22.3 327 37-404 2-363 (363)
200 TIGR03542 DAPAT_plant LL-diami 99.9 1.8E-24 3.9E-29 205.3 21.5 337 34-408 31-402 (402)
201 PRK08354 putative aminotransfe 99.9 3.8E-23 8.3E-28 189.4 26.2 298 34-407 6-309 (311)
202 PLN02231 alanine transaminase 99.9 2.5E-23 5.4E-28 201.6 25.9 333 54-410 142-527 (534)
203 PRK07908 hypothetical protein; 99.9 4.6E-23 1E-27 192.2 26.1 326 19-409 8-346 (349)
204 PLN02721 threonine aldolase 99.9 8.6E-23 1.9E-27 191.2 27.3 332 37-411 6-353 (353)
205 PRK04781 histidinol-phosphate 99.9 1.5E-23 3.3E-28 196.1 21.5 288 78-409 61-362 (364)
206 PRK09275 aspartate aminotransf 99.9 9.9E-24 2.2E-28 201.6 20.5 342 45-410 105-517 (527)
207 PRK04635 histidinol-phosphate 99.9 3.7E-23 8.1E-28 193.0 22.5 310 35-407 30-352 (354)
208 cd00609 AAT_like Aspartate ami 99.9 4.5E-23 9.8E-28 192.8 23.0 314 53-405 12-349 (350)
209 TIGR03392 FeS_syn_CsdA cystein 99.9 3.6E-22 7.7E-27 189.7 29.0 327 35-411 16-396 (398)
210 PLN02397 aspartate transaminas 99.9 8E-23 1.7E-27 194.6 24.2 336 36-409 48-420 (423)
211 cd00613 GDC-P Glycine cleavage 99.9 9.2E-23 2E-27 194.0 24.5 321 43-404 23-398 (398)
212 cd06502 TA_like Low-specificit 99.9 8.4E-23 1.8E-27 190.1 23.6 320 40-406 1-337 (338)
213 TIGR03801 asp_4_decarbox aspar 99.9 3.4E-23 7.3E-28 197.7 20.6 345 45-410 99-516 (521)
214 PRK10874 cysteine sulfinate de 99.9 6.3E-22 1.4E-26 188.2 29.2 326 35-411 19-399 (401)
215 PRK10534 L-threonine aldolase; 99.9 7.9E-23 1.7E-27 189.6 22.4 319 38-409 1-332 (333)
216 PRK08637 hypothetical protein; 99.9 2.8E-22 6E-27 189.4 26.4 305 73-411 45-387 (388)
217 COG1104 NifS Cysteine sulfinat 99.9 3E-22 6.5E-27 179.8 22.9 330 37-411 3-378 (386)
218 PRK13520 L-tyrosine decarboxyl 99.9 6.4E-22 1.4E-26 186.6 26.5 315 52-410 31-371 (371)
219 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1E-21 2.2E-26 184.1 27.3 318 53-408 10-355 (355)
220 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 9.8E-22 2.1E-26 184.4 27.2 302 77-410 52-368 (370)
221 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.3E-21 2.7E-26 184.7 27.5 330 48-410 27-381 (387)
222 cd06451 AGAT_like Alanine-glyo 99.9 9.8E-22 2.1E-26 184.1 24.6 316 53-409 10-356 (356)
223 PRK09295 bifunctional cysteine 99.9 1E-20 2.2E-25 180.1 29.9 324 36-409 24-403 (406)
224 COG0520 csdA Selenocysteine ly 99.9 1.2E-20 2.5E-25 176.2 28.3 314 53-409 34-404 (405)
225 TIGR02326 transamin_PhnW 2-ami 99.9 1.2E-20 2.5E-25 177.2 27.3 319 53-410 14-362 (363)
226 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.1E-20 1.1E-24 175.1 31.5 317 37-404 19-397 (397)
227 TIGR01979 sufS cysteine desulf 99.9 3.3E-20 7.2E-25 176.7 30.2 317 50-411 27-402 (403)
228 PRK13238 tnaA tryptophanase/L- 99.9 3.6E-20 7.9E-25 176.6 30.0 354 34-409 34-432 (460)
229 PLN02409 serine--glyoxylate am 99.9 6.2E-21 1.4E-25 180.6 24.0 320 53-411 20-373 (401)
230 PLN02368 alanine transaminase 99.9 1.5E-21 3.3E-26 183.7 19.5 249 74-345 109-395 (407)
231 PRK02948 cysteine desulfurase; 99.9 1.7E-20 3.7E-25 177.2 26.6 316 51-410 10-374 (381)
232 cd06453 SufS_like Cysteine des 99.9 7.9E-20 1.7E-24 172.4 29.4 312 49-404 7-373 (373)
233 TIGR03402 FeS_nifS cysteine de 99.9 2.7E-20 5.8E-25 175.8 26.3 313 53-410 11-372 (379)
234 TIGR03812 tyr_de_CO2_Arch tyro 99.9 5.5E-20 1.2E-24 173.5 27.1 312 53-406 32-372 (373)
235 PRK13479 2-aminoethylphosphona 99.9 1E-19 2.2E-24 171.2 28.0 318 53-411 16-364 (368)
236 PLN02855 Bifunctional selenocy 99.9 1.4E-19 3.1E-24 173.1 28.9 325 36-410 33-418 (424)
237 KOG0256 1-aminocyclopropane-1- 99.9 2.5E-20 5.5E-25 164.4 21.3 306 72-409 121-460 (471)
238 TIGR01814 kynureninase kynuren 99.9 1.1E-19 2.4E-24 172.9 27.5 321 50-408 36-405 (406)
239 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 2.4E-19 5.1E-24 168.1 28.3 327 49-408 9-360 (361)
240 TIGR01437 selA_rel uncharacter 99.9 5.5E-19 1.2E-23 164.7 30.3 320 36-408 8-363 (363)
241 cd00378 SHMT Serine-glycine hy 99.9 1.9E-19 4.1E-24 171.4 25.8 325 36-410 19-385 (402)
242 COG0075 Serine-pyruvate aminot 99.9 2.6E-19 5.6E-24 162.3 25.1 320 53-411 16-364 (383)
243 TIGR03403 nifS_epsilon cystein 99.8 4.9E-19 1.1E-23 167.3 26.1 311 53-410 11-375 (382)
244 COG2008 GLY1 Threonine aldolas 99.8 2.3E-19 5.1E-24 157.8 21.1 329 39-408 2-341 (342)
245 cd06450 DOPA_deC_like DOPA dec 99.8 9.6E-19 2.1E-23 163.2 26.2 280 74-406 36-344 (345)
246 KOG1357 Serine palmitoyltransf 99.8 1.4E-19 3E-24 161.6 18.8 326 33-408 131-500 (519)
247 PRK00011 glyA serine hydroxyme 99.8 2.6E-18 5.6E-23 164.2 29.0 325 36-410 25-389 (416)
248 TIGR02006 IscS cysteine desulf 99.8 7.1E-19 1.5E-23 167.1 24.5 257 36-324 4-282 (402)
249 TIGR01977 am_tr_V_EF2568 cyste 99.8 2.2E-18 4.9E-23 162.7 27.0 308 53-406 12-375 (376)
250 KOG0634 Aromatic amino acid am 99.8 1.5E-18 3.2E-23 154.6 23.7 323 61-410 90-466 (472)
251 KOG1368 Threonine aldolase [Am 99.8 1.6E-18 3.4E-23 146.9 20.7 328 36-406 21-364 (384)
252 PF00266 Aminotran_5: Aminotra 99.8 1.8E-18 3.9E-23 162.8 22.6 307 50-400 8-371 (371)
253 TIGR02379 ECA_wecE TDP-4-keto- 99.8 2.6E-18 5.5E-23 160.6 23.2 310 54-408 10-375 (376)
254 PRK13034 serine hydroxymethylt 99.8 1.4E-17 3E-22 158.0 28.1 310 53-410 40-392 (416)
255 cd00614 CGS_like CGS_like: Cys 99.8 1.3E-18 2.9E-23 162.9 19.8 237 74-346 38-293 (369)
256 cd00617 Tnase_like Tryptophana 99.8 1E-17 2.2E-22 157.7 25.2 351 33-410 17-408 (431)
257 PLN02651 cysteine desulfurase 99.8 6E-18 1.3E-22 158.7 21.3 245 52-323 10-277 (364)
258 PLN02242 methionine gamma-lyas 99.8 4.4E-18 9.6E-23 160.7 20.5 221 74-324 74-297 (418)
259 PRK06767 methionine gamma-lyas 99.8 7.2E-18 1.6E-22 158.6 21.7 286 74-410 59-385 (386)
260 COG3977 Alanine-alpha-ketoisov 99.8 3.7E-17 8E-22 138.8 23.5 307 72-410 74-411 (417)
261 PRK14012 cysteine desulfurase; 99.8 2.2E-17 4.8E-22 157.0 25.2 256 37-324 5-284 (404)
262 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.8E-17 3.9E-22 155.7 24.1 308 55-408 11-374 (375)
263 KOG2862 Alanine-glyoxylate ami 99.8 6.8E-17 1.5E-21 137.9 23.6 310 48-410 39-382 (385)
264 KOG1358 Serine palmitoyltransf 99.8 1.5E-17 3.3E-22 146.0 19.4 348 20-410 79-465 (467)
265 TIGR03235 DNA_S_dndA cysteine 99.8 2E-17 4.3E-22 154.7 20.8 303 50-399 7-347 (353)
266 KOG0633 Histidinol phosphate a 99.8 6.4E-17 1.4E-21 134.7 20.5 323 34-407 39-374 (375)
267 PRK00451 glycine dehydrogenase 99.8 2.1E-16 4.5E-21 152.4 27.5 277 81-408 117-446 (447)
268 PRK13580 serine hydroxymethylt 99.8 1.9E-16 4.2E-21 148.6 26.3 316 53-409 61-444 (493)
269 cd00616 AHBA_syn 3-amino-5-hyd 99.8 6.3E-17 1.4E-21 151.5 22.7 299 59-405 3-352 (352)
270 PRK07810 O-succinylhomoserine 99.8 9.6E-17 2.1E-21 151.2 22.6 234 74-346 68-323 (403)
271 PRK06234 methionine gamma-lyas 99.8 3.5E-17 7.5E-22 154.5 19.6 265 74-382 62-344 (400)
272 TIGR01325 O_suc_HS_sulf O-succ 99.8 3.6E-17 7.7E-22 153.6 19.0 238 73-346 51-306 (380)
273 PRK08247 cystathionine gamma-s 99.8 9.1E-17 2E-21 150.1 21.6 233 73-345 49-287 (366)
274 PRK08133 O-succinylhomoserine 99.8 1E-16 2.2E-21 150.8 21.6 238 75-346 60-313 (390)
275 PRK07504 O-succinylhomoserine 99.8 9E-17 1.9E-21 151.4 21.3 240 73-346 62-318 (398)
276 PRK08249 cystathionine gamma-s 99.8 1.7E-16 3.7E-21 149.3 23.0 240 73-346 61-316 (398)
277 KOG1549 Cysteine desulfurase N 99.8 1.3E-16 2.9E-21 144.1 20.5 198 36-266 44-257 (428)
278 TIGR02080 O_succ_thio_ly O-suc 99.8 1.4E-16 3.1E-21 149.2 21.6 239 73-346 48-304 (382)
279 TIGR01328 met_gam_lyase methio 99.8 1.5E-16 3.3E-21 149.6 21.8 241 74-346 57-313 (391)
280 PRK02769 histidine decarboxyla 99.8 1.5E-15 3.2E-20 141.5 27.8 289 75-409 64-371 (380)
281 TIGR01324 cysta_beta_ly_B cyst 99.7 1.7E-16 3.6E-21 148.1 21.0 289 75-410 49-376 (377)
282 PRK08045 cystathionine gamma-s 99.7 3E-16 6.5E-21 147.0 22.6 240 73-346 49-305 (386)
283 PRK06460 hypothetical protein; 99.7 2.1E-16 4.6E-21 147.9 21.5 235 75-346 44-297 (376)
284 PRK07049 methionine gamma-lyas 99.7 3.7E-16 8.1E-21 148.2 23.1 219 73-324 80-311 (427)
285 PLN03226 serine hydroxymethylt 99.7 2.4E-15 5.3E-20 143.9 28.8 324 37-409 35-418 (475)
286 COG0399 WecE Predicted pyridox 99.7 5E-16 1.1E-20 141.3 22.7 308 54-410 14-373 (374)
287 PLN03032 serine decarboxylase; 99.7 1.9E-15 4.2E-20 139.6 26.6 306 54-406 36-372 (374)
288 PTZ00094 serine hydroxymethylt 99.7 1.3E-15 2.8E-20 146.4 26.0 328 37-409 35-407 (452)
289 PRK11658 UDP-4-amino-4-deoxy-L 99.7 9E-16 2E-20 144.2 24.1 310 55-409 14-378 (379)
290 PRK05968 hypothetical protein; 99.7 2.9E-16 6.3E-21 147.7 19.6 259 75-384 62-335 (389)
291 PRK09028 cystathionine beta-ly 99.7 4E-16 8.6E-21 145.5 19.9 233 78-346 63-313 (394)
292 PRK07811 cystathionine gamma-s 99.7 1E-15 2.2E-20 143.9 22.5 239 74-346 59-314 (388)
293 PRK07503 methionine gamma-lyas 99.7 1.1E-15 2.4E-20 144.4 22.5 219 74-324 63-283 (403)
294 PRK08776 cystathionine gamma-s 99.7 1.2E-15 2.6E-20 143.7 22.7 238 73-346 57-313 (405)
295 PRK07050 cystathionine beta-ly 99.7 7E-16 1.5E-20 145.1 21.0 292 73-410 62-391 (394)
296 PRK07582 cystathionine gamma-l 99.7 1.2E-15 2.6E-20 142.4 22.3 236 73-346 48-300 (366)
297 PRK08861 cystathionine gamma-s 99.7 1.3E-15 2.9E-20 142.2 21.2 238 74-346 51-306 (388)
298 TIGR01788 Glu-decarb-GAD gluta 99.7 5.4E-15 1.2E-19 139.6 25.2 325 53-411 53-430 (431)
299 PRK07269 cystathionine gamma-s 99.7 2.3E-15 4.9E-20 140.0 20.5 229 75-346 53-288 (364)
300 PF01041 DegT_DnrJ_EryC1: DegT 99.7 5.3E-15 1.2E-19 138.4 23.0 302 55-405 5-363 (363)
301 TIGR01329 cysta_beta_ly_E cyst 99.7 2.8E-15 6.2E-20 140.4 20.7 285 75-410 46-375 (378)
302 PRK06084 O-acetylhomoserine am 99.7 5.2E-15 1.1E-19 140.2 22.3 217 75-324 57-308 (425)
303 PRK15407 lipopolysaccharide bi 99.7 6.7E-15 1.5E-19 140.0 22.7 306 57-409 46-435 (438)
304 PRK08574 cystathionine gamma-s 99.7 6.1E-15 1.3E-19 138.3 21.4 214 75-324 52-269 (385)
305 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 5.4E-15 1.2E-19 140.4 21.3 162 74-266 55-219 (418)
306 PLN02509 cystathionine beta-ly 99.7 6.3E-15 1.4E-19 140.0 20.9 210 75-324 132-349 (464)
307 PLN02414 glycine dehydrogenase 99.7 3.1E-14 6.6E-19 144.9 26.9 302 75-410 567-907 (993)
308 PRK08248 O-acetylhomoserine am 99.7 1.6E-14 3.6E-19 136.9 23.5 160 75-264 63-224 (431)
309 PRK05994 O-acetylhomoserine am 99.7 6.1E-15 1.3E-19 140.1 20.4 239 75-346 62-349 (427)
310 PRK04366 glycine dehydrogenase 99.7 4.9E-14 1.1E-18 136.2 26.3 318 52-410 81-448 (481)
311 PRK05967 cystathionine beta-ly 99.7 1.1E-14 2.4E-19 135.6 20.6 237 74-346 62-316 (395)
312 TIGR03588 PseC UDP-4-keto-6-de 99.7 4.6E-14 9.9E-19 133.2 25.1 312 55-408 10-380 (380)
313 cd00615 Orn_deC_like Ornithine 99.7 1.3E-15 2.8E-20 138.3 13.5 228 73-322 56-293 (294)
314 PRK06702 O-acetylhomoserine am 99.7 1.2E-14 2.6E-19 136.9 19.8 262 49-346 33-347 (432)
315 TIGR03531 selenium_SpcS O-phos 99.7 4.1E-14 9E-19 133.0 23.3 299 75-408 104-444 (444)
316 PRK04311 selenocysteine syntha 99.6 1.9E-13 4E-18 130.0 27.1 316 53-409 98-463 (464)
317 PRK05939 hypothetical protein; 99.6 2E-14 4.4E-19 135.1 20.4 160 75-264 46-206 (397)
318 PLN02263 serine decarboxylase 99.6 2.9E-13 6.2E-18 127.1 27.7 291 74-409 131-442 (470)
319 PRK03080 phosphoserine aminotr 99.6 4E-14 8.6E-19 133.1 22.0 309 53-410 23-373 (378)
320 PRK08064 cystathionine beta-ly 99.6 3.8E-14 8.3E-19 133.4 21.2 237 75-346 53-306 (390)
321 PRK07671 cystathionine beta-ly 99.6 4.5E-14 9.7E-19 132.2 21.3 216 74-324 48-266 (377)
322 PRK06176 cystathionine gamma-s 99.6 5.3E-14 1.2E-18 131.7 20.6 169 75-273 49-220 (380)
323 COG3844 Kynureninase [Amino ac 99.6 4.1E-13 8.9E-18 115.9 23.8 331 32-410 28-402 (407)
324 PRK08114 cystathionine beta-ly 99.6 4.2E-14 9.2E-19 131.6 19.3 236 75-346 61-316 (395)
325 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 5.1E-14 1.1E-18 130.8 18.6 233 75-347 54-311 (386)
326 PRK08134 O-acetylhomoserine am 99.6 1.9E-13 4.1E-18 129.7 22.8 157 75-262 63-222 (433)
327 PRK05355 3-phosphoserine/phosp 99.6 1.5E-13 3.2E-18 127.9 21.4 306 53-410 14-358 (360)
328 PRK07812 O-acetylhomoserine am 99.6 1.8E-13 4E-18 129.6 22.2 159 75-262 68-228 (436)
329 PLN02880 tyrosine decarboxylas 99.6 2.9E-13 6.3E-18 130.3 23.5 312 74-410 120-484 (490)
330 TIGR00461 gcvP glycine dehydro 99.6 5.6E-13 1.2E-17 134.1 25.6 300 76-410 530-867 (939)
331 TIGR03799 NOD_PanD_pyr putativ 99.6 1E-12 2.2E-17 126.9 24.9 307 74-403 127-518 (522)
332 TIGR00474 selA seryl-tRNA(sec) 99.6 1.2E-12 2.6E-17 124.1 25.0 310 53-404 93-453 (454)
333 PRK05367 glycine dehydrogenase 99.6 3.3E-13 7.2E-18 138.0 22.6 300 76-410 542-875 (954)
334 TIGR01364 serC_1 phosphoserine 99.6 4.7E-13 1E-17 123.9 21.6 307 53-410 3-348 (349)
335 PLN02590 probable tyrosine dec 99.6 3.4E-12 7.3E-17 123.1 28.0 312 74-410 168-532 (539)
336 TIGR01366 serC_3 phosphoserine 99.6 3.4E-13 7.3E-18 125.8 20.4 305 53-411 14-361 (361)
337 PRK12566 glycine dehydrogenase 99.6 1.2E-12 2.7E-17 130.9 25.0 301 75-410 542-876 (954)
338 COG1103 Archaea-specific pyrid 99.6 9.2E-13 2E-17 110.7 20.1 324 52-410 28-380 (382)
339 PLN02724 Molybdenum cofactor s 99.6 2.1E-12 4.6E-17 132.2 26.6 345 35-408 34-486 (805)
340 cd00611 PSAT_like Phosphoserin 99.5 5.4E-13 1.2E-17 124.4 19.3 309 53-407 10-353 (355)
341 COG2873 MET17 O-acetylhomoseri 99.5 4.1E-13 8.9E-18 118.1 16.7 186 48-264 33-222 (426)
342 KOG0258 Alanine aminotransfera 99.5 2.3E-12 4.9E-17 113.8 19.9 285 73-382 114-437 (475)
343 cd01494 AAT_I Aspartate aminot 99.5 2E-13 4.3E-18 113.6 12.9 163 79-264 3-169 (170)
344 TIGR02618 tyr_phenol_ly tyrosi 99.5 1.1E-11 2.4E-16 115.2 24.4 347 34-410 36-426 (450)
345 PRK05613 O-acetylhomoserine am 99.5 3.1E-12 6.8E-17 121.3 20.0 159 75-262 68-228 (437)
346 COG0626 MetC Cystathionine bet 99.5 3.1E-12 6.6E-17 117.5 17.9 283 75-410 62-394 (396)
347 KOG0053 Cystathionine beta-lya 99.5 5.5E-12 1.2E-16 114.3 18.9 210 78-323 79-293 (409)
348 PLN02271 serine hydroxymethylt 99.5 3.4E-11 7.5E-16 114.1 24.3 286 75-409 193-539 (586)
349 PRK13237 tyrosine phenol-lyase 99.5 7.1E-11 1.5E-15 110.2 25.9 343 34-410 43-433 (460)
350 PLN02452 phosphoserine transam 99.4 3.3E-11 7.2E-16 111.6 22.3 320 38-409 8-362 (365)
351 COG1448 TyrB Aspartate/tyrosin 99.4 1.8E-11 4E-16 108.7 19.2 278 95-407 97-395 (396)
352 PRK06434 cystathionine gamma-l 99.4 2.6E-11 5.7E-16 113.1 19.8 229 75-346 63-308 (384)
353 COG0076 GadB Glutamate decarbo 99.4 4.1E-11 8.9E-16 113.7 20.7 269 53-345 74-379 (460)
354 PRK15029 arginine decarboxylas 99.4 3.3E-11 7.1E-16 119.8 19.9 312 75-407 204-601 (755)
355 PF01212 Beta_elim_lyase: Beta 99.4 1.3E-12 2.8E-17 116.9 9.0 197 53-272 7-215 (290)
356 COG1003 GcvP Glycine cleavage 99.4 1.7E-10 3.8E-15 103.8 21.9 296 75-410 108-447 (496)
357 COG0112 GlyA Glycine/serine hy 99.4 1.2E-09 2.6E-14 97.6 26.5 323 37-410 27-390 (413)
358 PF01276 OKR_DC_1: Orn/Lys/Arg 99.3 2.1E-12 4.6E-17 119.5 7.0 299 74-394 64-415 (417)
359 PF12897 Aminotran_MocR: Alani 99.3 2.5E-10 5.5E-15 101.8 17.8 296 79-409 72-414 (425)
360 TIGR01365 serC_2 phosphoserine 99.3 6.4E-10 1.4E-14 103.1 21.2 298 75-410 38-373 (374)
361 TIGR02617 tnaA_trp_ase tryptop 99.3 7.9E-09 1.7E-13 95.5 26.4 340 34-409 39-440 (467)
362 PF00464 SHMT: Serine hydroxym 99.3 4.5E-10 9.8E-15 103.7 17.8 306 52-403 31-398 (399)
363 PF00282 Pyridoxal_deC: Pyrido 99.2 5E-10 1.1E-14 104.4 17.6 174 75-266 78-277 (373)
364 PLN02414 glycine dehydrogenase 99.2 1.8E-09 3.9E-14 110.6 22.2 310 38-405 104-464 (993)
365 PRK13578 ornithine decarboxyla 99.2 3.7E-09 8.1E-14 104.3 21.6 311 75-407 173-562 (720)
366 PRK15399 lysine decarboxylase 99.2 1.1E-08 2.3E-13 101.1 24.6 308 75-407 194-556 (713)
367 PRK15400 lysine decarboxylase 99.1 4.6E-09 1E-13 103.6 20.1 309 75-407 194-556 (714)
368 PRK05367 glycine dehydrogenase 99.1 4.2E-09 9.1E-14 108.3 20.1 306 48-405 84-437 (954)
369 KOG3846 L-kynurenine hydrolase 99.1 9.7E-09 2.1E-13 88.4 18.8 331 48-410 74-461 (465)
370 PRK12462 phosphoserine aminotr 99.1 7E-08 1.5E-12 88.7 25.2 311 53-409 15-361 (364)
371 TIGR03811 tyr_de_CO2_Ent tyros 99.0 2.6E-07 5.7E-12 90.5 26.3 138 74-229 121-325 (608)
372 KOG2040 Glycine dehydrogenase 99.0 4.7E-08 1E-12 92.2 19.5 298 75-409 581-917 (1001)
373 COG1982 LdcC Arginine/lysine/o 99.0 1.9E-07 4.2E-12 88.7 22.8 300 75-405 69-403 (557)
374 COG1921 SelA Selenocysteine sy 98.9 1.2E-07 2.5E-12 86.2 17.7 239 37-305 21-273 (395)
375 KOG1383 Glutamate decarboxylas 98.8 3.6E-07 7.8E-12 83.5 16.8 334 33-411 76-447 (491)
376 COG0403 GcvP Glycine cleavage 98.8 5.9E-06 1.3E-10 75.1 23.4 322 37-408 75-448 (450)
377 PF03841 SelA: L-seryl-tRNA se 98.7 9.4E-09 2E-13 92.4 4.0 226 48-302 11-260 (367)
378 COG3033 TnaA Tryptophanase [Am 98.7 4.3E-05 9.3E-10 67.9 25.7 347 34-409 44-443 (471)
379 KOG0629 Glutamate decarboxylas 98.7 1.7E-06 3.7E-11 78.2 17.4 310 79-410 144-509 (510)
380 TIGR00461 gcvP glycine dehydro 98.6 5.6E-06 1.2E-10 84.5 21.5 310 38-405 65-426 (939)
381 PF05889 SLA_LP_auto_ag: Solub 98.6 2E-06 4.3E-11 78.3 16.4 300 79-409 59-389 (389)
382 PF06838 Met_gamma_lyase: Meth 98.6 2.7E-05 5.9E-10 69.8 22.8 281 54-374 26-333 (403)
383 PF04864 Alliinase_C: Allinase 98.6 5.6E-07 1.2E-11 79.6 12.1 260 91-406 65-361 (363)
384 KOG1412 Aspartate aminotransfe 98.5 4E-06 8.7E-11 72.7 14.7 279 96-410 103-405 (410)
385 KOG2467 Glycine/serine hydroxy 98.5 4.3E-05 9.4E-10 68.0 20.2 328 38-408 42-424 (477)
386 PF02347 GDC-P: Glycine cleava 98.4 1.2E-05 2.7E-10 75.0 15.3 273 78-404 112-429 (429)
387 KOG0628 Aromatic-L-amino-acid/ 98.3 8.6E-05 1.9E-09 68.2 19.0 301 75-410 112-471 (511)
388 KOG1411 Aspartate aminotransfe 98.2 3.9E-05 8.4E-10 67.8 13.8 151 96-262 124-285 (427)
389 COG4100 Cystathionine beta-lya 98.0 0.0064 1.4E-07 53.1 21.5 266 70-374 59-344 (416)
390 COG1932 SerC Phosphoserine ami 97.9 0.0028 6.2E-08 57.1 19.6 312 53-410 16-363 (365)
391 PRK12566 glycine dehydrogenase 97.7 0.006 1.3E-07 62.7 21.0 307 38-405 80-439 (954)
392 KOG3843 Predicted serine hydro 97.3 0.017 3.8E-07 49.5 14.9 108 169-283 142-258 (432)
393 PLN02994 1-aminocyclopropane-1 97.2 0.0026 5.7E-08 51.2 8.6 72 56-130 77-153 (153)
394 KOG2040 Glycine dehydrogenase 88.5 28 0.00061 34.7 20.4 42 364-405 435-478 (1001)
395 KOG1465 Translation initiation 85.6 26 0.00057 31.3 12.7 117 91-236 161-281 (353)
396 PF12138 Spherulin4: Spherulat 70.0 15 0.00032 32.4 6.3 57 170-226 18-78 (253)
397 PLN02672 methionine S-methyltr 69.9 55 0.0012 35.5 11.4 150 58-226 407-566 (1082)
398 PRK08535 translation initiatio 68.1 42 0.00091 30.7 9.0 117 79-223 108-228 (310)
399 TIGR00511 ribulose_e2b2 ribose 64.9 1.1E+02 0.0024 27.9 11.0 122 79-226 103-227 (301)
400 PRK08335 translation initiatio 64.5 80 0.0017 28.3 9.7 117 80-222 98-216 (275)
401 PF03652 UPF0081: Uncharacteri 64.4 38 0.00083 26.6 7.0 57 169-227 39-98 (135)
402 TIGR00524 eIF-2B_rel eIF-2B al 61.5 77 0.0017 28.9 9.3 36 189-226 205-241 (303)
403 KOG3974 Predicted sugar kinase 58.3 13 0.00029 32.4 3.6 48 169-224 91-139 (306)
404 COG0108 RibB 3,4-dihydroxy-2-b 57.7 14 0.0003 30.9 3.5 35 182-221 155-189 (203)
405 COG0352 ThiE Thiamine monophos 57.0 27 0.00059 29.8 5.3 96 170-273 24-121 (211)
406 KOG0352 ATP-dependent DNA heli 56.1 26 0.00057 33.1 5.3 55 181-251 111-169 (641)
407 smart00642 Aamy Alpha-amylase 55.6 37 0.0008 27.8 5.8 59 169-227 17-93 (166)
408 PF06153 DUF970: Protein of un 54.7 14 0.00031 27.6 2.8 50 360-409 9-65 (109)
409 COG1105 FruK Fructose-1-phosph 52.7 39 0.00084 30.7 5.8 54 170-227 116-169 (310)
410 PF05913 DUF871: Bacterial pro 49.9 52 0.0011 30.8 6.4 91 169-268 12-104 (357)
411 PF01008 IF-2B: Initiation fac 49.8 82 0.0018 28.3 7.6 110 91-223 106-216 (282)
412 PF05621 TniB: Bacterial TniB 48.2 32 0.0007 31.1 4.6 97 175-273 139-248 (302)
413 PF13481 AAA_25: AAA domain; P 48.1 38 0.00081 28.2 4.9 53 169-222 128-184 (193)
414 cd03328 MR_like_3 Mandelate ra 47.8 2E+02 0.0044 26.8 10.1 46 169-222 246-291 (352)
415 COG2870 RfaE ADP-heptose synth 47.3 1.5E+02 0.0034 28.0 8.7 55 169-229 129-183 (467)
416 TIGR00789 flhB_rel flhB C-term 47.0 21 0.00046 25.2 2.6 22 206-227 29-50 (82)
417 PRK13396 3-deoxy-7-phosphohept 46.2 2.5E+02 0.0055 26.2 10.8 55 169-227 220-281 (352)
418 TIGR01361 DAHP_synth_Bsub phos 44.5 2.3E+02 0.0049 25.2 10.4 58 169-227 144-204 (260)
419 cd04920 ACT_AKiii-DAPDC_2 ACT 44.3 53 0.0012 21.6 4.2 45 364-408 17-61 (63)
420 PRK12595 bifunctional 3-deoxy- 44.2 2.8E+02 0.006 26.1 10.5 55 169-227 237-297 (360)
421 COG0616 SppA Periplasmic serin 44.2 31 0.00068 31.6 4.0 58 169-227 81-140 (317)
422 PRK06552 keto-hydroxyglutarate 44.0 2.1E+02 0.0045 24.6 9.1 38 169-222 77-114 (213)
423 KOG1564 DNA repair protein RHP 43.4 1.6E+02 0.0036 26.4 7.9 72 155-226 173-263 (351)
424 COG1066 Sms Predicted ATP-depe 42.4 58 0.0013 30.9 5.3 60 161-222 148-215 (456)
425 COG1088 RfbB dTDP-D-glucose 4, 41.9 2.7E+02 0.0059 25.3 12.6 95 117-229 25-133 (340)
426 PRK03892 ribonuclease P protei 41.8 2.2E+02 0.0048 24.2 9.2 75 169-254 117-195 (216)
427 COG2515 Acd 1-aminocyclopropan 41.5 2.8E+02 0.006 25.3 12.0 36 191-228 249-284 (323)
428 PF07905 PucR: Purine cataboli 41.2 61 0.0013 24.9 4.7 47 169-222 57-104 (123)
429 cd03320 OSBS o-Succinylbenzoat 41.1 2.6E+02 0.0055 24.8 9.9 47 169-223 187-233 (263)
430 PF05368 NmrA: NmrA-like famil 40.4 2.4E+02 0.0051 24.2 8.9 54 161-222 46-99 (233)
431 TIGR00506 ribB 3,4-dihydroxy-2 40.2 48 0.001 28.0 4.2 34 183-221 157-190 (199)
432 cd04937 ACT_AKi-DapG-BS_2 ACT 40.0 63 0.0014 21.2 4.1 45 364-408 18-62 (64)
433 PF00926 DHBP_synthase: 3,4-di 38.9 40 0.00086 28.4 3.5 35 182-221 151-185 (194)
434 TIGR00161 conserved hypothetic 38.3 2E+02 0.0044 25.1 8.0 42 284-325 179-221 (238)
435 PRK06371 translation initiatio 37.3 2.4E+02 0.0052 26.1 8.4 33 189-223 223-255 (329)
436 cd01393 recA_like RecA is a b 36.8 2.7E+02 0.0057 23.7 10.0 65 162-226 88-169 (226)
437 COG4531 ZnuA ABC-type Zn2+ tra 36.4 2.4E+02 0.0053 25.1 7.8 77 304-380 176-263 (318)
438 PRK00109 Holliday junction res 36.3 1.3E+02 0.0028 23.7 5.9 57 169-227 42-100 (138)
439 cd04915 ACT_AK-Ectoine_2 ACT d 35.9 89 0.0019 20.8 4.3 46 363-408 17-64 (66)
440 PRK15440 L-rhamnonate dehydrat 35.5 2.6E+02 0.0057 26.6 8.8 46 169-222 272-317 (394)
441 cd01422 MGS Methylglyoxal synt 35.4 1.8E+02 0.0039 22.0 6.4 46 171-222 60-106 (115)
442 cd03315 MLE_like Muconate lact 35.4 3.1E+02 0.0068 24.2 10.5 47 169-223 191-237 (265)
443 cd03316 MR_like Mandelate race 34.8 2.6E+02 0.0057 26.0 8.8 46 169-222 251-296 (357)
444 PF14871 GHL6: Hypothetical gl 34.8 86 0.0019 24.5 4.6 19 203-221 43-61 (132)
445 cd01827 sialate_O-acetylestera 34.8 89 0.0019 25.7 5.2 52 170-221 95-152 (188)
446 cd07571 ALP_N-acyl_transferase 34.5 96 0.0021 27.6 5.6 36 187-222 42-77 (270)
447 COG0816 Predicted endonuclease 34.2 1.2E+02 0.0026 24.0 5.3 57 169-227 41-99 (141)
448 PRK00910 ribB 3,4-dihydroxy-2- 33.9 69 0.0015 27.5 4.2 37 183-224 168-205 (218)
449 cd01121 Sms Sms (bacterial rad 33.5 79 0.0017 29.8 5.0 56 165-222 142-205 (372)
450 cd03325 D-galactonate_dehydrat 33.2 3.8E+02 0.0083 24.9 9.5 46 169-222 238-283 (352)
451 PF13167 GTP-bdg_N: GTP-bindin 33.0 2E+02 0.0042 21.1 6.7 58 169-227 9-68 (95)
452 cd00308 enolase_like Enolase-s 32.9 3.2E+02 0.0069 23.5 8.5 46 169-222 156-201 (229)
453 cd04923 ACT_AK-LysC-DapG-like_ 32.9 89 0.0019 19.9 3.9 45 364-408 17-61 (63)
454 PRK05583 ribosomal protein L7A 32.5 1.2E+02 0.0025 22.6 4.8 44 170-223 22-65 (104)
455 cd01455 vWA_F11C1-5a_type Von 32.4 1.5E+02 0.0033 24.9 5.9 34 184-221 113-146 (191)
456 cd04918 ACT_AK1-AT_2 ACT domai 32.3 1.1E+02 0.0024 20.1 4.3 45 364-408 17-63 (65)
457 PRK06015 keto-hydroxyglutarate 32.1 3.2E+02 0.0069 23.2 7.9 39 169-223 65-103 (201)
458 PRK13602 putative ribosomal pr 32.1 1.3E+02 0.0029 21.1 4.8 46 170-225 16-61 (82)
459 PRK00014 ribB 3,4-dihydroxy-2- 31.8 77 0.0017 27.4 4.1 39 183-226 172-211 (230)
460 COG2257 Uncharacterized homolo 31.5 31 0.00067 24.6 1.4 23 206-228 34-56 (92)
461 cd04917 ACT_AKiii-LysC-EC_2 AC 31.3 1.2E+02 0.0027 19.7 4.4 45 364-408 18-62 (64)
462 TIGR00250 RNAse_H_YqgF RNAse H 30.9 1.3E+02 0.0028 23.4 5.0 57 169-227 36-94 (130)
463 PRK03767 NAD(P)H:quinone oxido 30.8 2.4E+02 0.0051 23.8 7.1 38 182-223 106-143 (200)
464 PRK01792 ribB 3,4-dihydroxy-2- 30.6 83 0.0018 26.9 4.1 34 183-221 167-200 (214)
465 PF07282 OrfB_Zn_ribbon: Putat 30.4 73 0.0016 21.3 3.2 24 204-227 3-27 (69)
466 smart00545 JmjN Small domain f 30.4 55 0.0012 19.7 2.2 23 200-222 13-35 (42)
467 cd01822 Lysophospholipase_L1_l 30.2 2.9E+02 0.0062 22.1 9.4 49 170-221 90-139 (177)
468 cd00984 DnaB_C DnaB helicase C 30.1 1.3E+02 0.0027 26.1 5.5 54 169-222 107-168 (242)
469 PRK05234 mgsA methylglyoxal sy 30.0 1.6E+02 0.0034 23.4 5.5 50 171-226 65-115 (142)
470 PRK04148 hypothetical protein; 30.0 2.7E+02 0.0059 21.8 10.0 24 199-222 84-107 (134)
471 PF02844 GARS_N: Phosphoribosy 30.0 2.3E+02 0.005 20.9 6.5 44 166-221 47-90 (100)
472 COG0296 GlgB 1,4-alpha-glucan 29.8 62 0.0014 32.7 3.7 26 204-229 214-239 (628)
473 PF13401 AAA_22: AAA domain; P 29.6 61 0.0013 24.7 3.1 27 201-227 71-98 (131)
474 COG4152 ABC-type uncharacteriz 29.6 4.1E+02 0.0088 23.6 9.3 92 75-215 105-199 (300)
475 PF07085 DRTGG: DRTGG domain; 29.3 1.2E+02 0.0027 22.3 4.6 49 162-223 43-91 (105)
476 COG1137 YhbG ABC-type (unclass 29.2 1.6E+02 0.0034 25.2 5.4 16 206-223 199-214 (243)
477 PF00455 DeoRC: DeoR C termina 29.1 3.1E+02 0.0067 22.1 10.5 50 177-226 88-138 (161)
478 cd04936 ACT_AKii-LysC-BS-like_ 29.1 1.1E+02 0.0025 19.4 4.0 45 364-408 17-61 (63)
479 COG4948 L-alanine-DL-glutamate 29.1 4.6E+02 0.0099 24.6 9.4 45 169-221 250-294 (372)
480 PRK13397 3-deoxy-7-phosphohept 28.6 4E+02 0.0088 23.5 8.1 55 169-227 134-194 (250)
481 COG3589 Uncharacterized conser 28.6 1.2E+02 0.0026 27.8 5.0 58 205-270 50-108 (360)
482 COG4294 Uve UV damage repair e 28.6 2.7E+02 0.0058 25.2 6.9 50 170-227 190-240 (347)
483 PF13872 AAA_34: P-loop contai 28.5 38 0.00082 30.6 1.8 22 206-227 161-183 (303)
484 PRK13601 putative L7Ae-like ri 28.4 1.7E+02 0.0036 20.7 4.7 46 171-226 14-59 (82)
485 TIGR01766 tspaseT_teng_C trans 28.0 78 0.0017 22.0 3.1 23 205-227 58-81 (82)
486 PRK06512 thiamine-phosphate py 27.6 68 0.0015 27.7 3.2 20 206-225 60-79 (221)
487 PF02603 Hpr_kinase_N: HPr Ser 27.5 54 0.0012 25.4 2.4 45 169-223 66-111 (127)
488 cd01821 Rhamnogalacturan_acety 27.4 2E+02 0.0042 23.9 6.1 50 170-221 96-150 (198)
489 TIGR03573 WbuX N-acetyl sugar 27.3 5.1E+02 0.011 24.1 12.5 22 206-227 149-170 (343)
490 PF02677 DUF208: Uncharacteriz 27.1 72 0.0016 26.3 3.1 48 172-227 14-64 (176)
491 PRK01018 50S ribosomal protein 27.0 1.5E+02 0.0033 21.7 4.6 43 171-223 22-64 (99)
492 PRK09355 hydroxyethylthiazole 27.0 62 0.0013 28.8 3.0 50 169-227 44-94 (263)
493 COG1377 FlhB Flagellar biosynt 26.7 1.1E+02 0.0024 28.5 4.5 45 183-227 262-319 (363)
494 KOG2433 Uncharacterized conser 26.4 2.9E+02 0.0064 26.0 7.0 63 53-115 434-498 (577)
495 PF02142 MGS: MGS-like domain 26.3 48 0.001 24.0 1.8 44 172-221 51-94 (95)
496 PRK14017 galactonate dehydrata 26.2 5.6E+02 0.012 24.2 9.4 46 169-222 239-284 (382)
497 PRK10785 maltodextrin glucosid 26.1 1.3E+02 0.0028 30.5 5.4 59 169-227 177-249 (598)
498 TIGR03581 EF_0839 conserved hy 26.1 2E+02 0.0044 24.6 5.5 32 196-229 183-214 (236)
499 TIGR00160 MGSA methylglyoxal s 26.0 2.9E+02 0.0062 22.0 6.0 54 171-229 63-116 (143)
500 PF00128 Alpha-amylase: Alpha 25.9 46 0.001 29.9 2.1 24 204-227 52-75 (316)
No 1
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.4e-70 Score=491.64 Aligned_cols=411 Identities=59% Similarity=1.024 Sum_probs=390.1
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~ 80 (411)
||+||||++|.+.+.+..|+.+.+++|+++||.|||+|+||..+|++.-+||+||.|++|+.++++++..++.+++.+.+
T Consensus 18 ~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~ 97 (432)
T COG0001 18 IPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVE 97 (432)
T ss_pred CCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence 79999999999999988999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCC
Q 015230 81 LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY 160 (411)
Q Consensus 81 l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (411)
+++.+.+..+..+.|-|+||||||...||+++|.++++++|+.|+++|||+.+..+...|.+......|...+++.....
T Consensus 98 ~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~ 177 (432)
T COG0001 98 LAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAK 177 (432)
T ss_pred HHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhc
Confidence 99999999998899999999999999999999999999999999999999999999988887777777889999988899
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCcccccc
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~ 240 (411)
.+..+|+||++.+++++++.++++++||+||+.++.|.+.|+++|++.|+++|++||++||.||+.+|||.....+++.+
T Consensus 178 ~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~ 257 (432)
T COG0001 178 HTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257 (432)
T ss_pred cEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccccc
Confidence 99999999999999999998889999999999999999999999999999999999999999999999977766788899
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 319 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 319 (411)
++.||+.|++|.++||+|+|.+.+++++++.+.+..+.++.+|+++||++++++.+.++.+.. +...+++.+..+++++
T Consensus 258 gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~ 337 (432)
T COG0001 258 GVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAE 337 (432)
T ss_pred CcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888889999999999999999999999887 5689999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQH 399 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~ 399 (411)
.|++...++++...+...|.++.+.+......++..+...+.+...++.+.|.++||++.|+.+....++..+|+++|++
T Consensus 338 gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS~ahte~di~~ 417 (432)
T COG0001 338 GLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLSTAHTEEDIDR 417 (432)
T ss_pred HHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCccccceeeecccCHHHHHH
Confidence 99999999999999999999999999887788888888777777888888999999999999887889999999999999
Q ss_pred HHHHHHHHHHhC
Q 015230 400 TITAAEKVLRQI 411 (411)
Q Consensus 400 ~i~~l~~~~~~~ 411 (411)
.+++++++++++
T Consensus 418 ~~~a~~~~~~~~ 429 (432)
T COG0001 418 TLEAADEAFKEL 429 (432)
T ss_pred HHHHHHHHHHHh
Confidence 999999988763
No 2
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-71 Score=489.20 Aligned_cols=372 Identities=32% Similarity=0.466 Sum_probs=338.7
Q ss_pred cccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHHHHHHHHHHhhC
Q 015230 12 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAV 89 (411)
Q Consensus 12 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~l~~~l~~~~ 89 (411)
++..++.|+++.+++|+|+||.+|++|+||.++++++++||+||.+++++.+++++.. ...+.++...+++++|.+..
T Consensus 18 ~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s 97 (404)
T COG4992 18 MPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELS 97 (404)
T ss_pred hcccCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhC
Confidence 4445556899999999999999999999999999999999999999999999999954 45578999999999999998
Q ss_pred CCCCEEEEeCChHHHHHHHHHHHHhccC---CcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 90 PSIEMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 90 ~~~~~v~~~~~g~~a~~~al~~~~~~~~---~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
+..++|+|+|||+||+|+||+++|.+.+ +.+||.+.++|||++..++.+++.+-+..++ |.. ..+..+
T Consensus 98 ~~~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~--------~g~~~v 169 (404)
T COG4992 98 PFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLL--------PGFRHV 169 (404)
T ss_pred ccccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCC--------CCceec
Confidence 6699999999999999999999999887 6799999999999999999999986444332 222 246789
Q ss_pred CCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCc
Q 015230 166 PFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 244 (411)
Q Consensus 166 ~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~ 244 (411)
|+||+++++++++ +++++|++||+++++|++.++++|+++++++|++||+++|.||+|+|+ |+|++|+.+++++.|
T Consensus 170 pfnDi~al~~ai~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~P 246 (404)
T COG4992 170 PFNDIEALEAAID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEP 246 (404)
T ss_pred CCCCHHHHHHHhc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCC
Confidence 9999999999998 489999999999999999999999999999999999999999999999 999999999999999
Q ss_pred chhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 245 DLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 245 d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
||++++|+++||+|+|++.+++...+.+. +..|++||++||++|+++.++++.+.++++.++.++.+.+++++|+++
T Consensus 247 DI~tlaK~LgGG~PigA~la~~~~~~~~~---~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l 323 (404)
T COG4992 247 DILTLAKALGGGFPIGAMLATEEIASAFT---PGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLREL 323 (404)
T ss_pred CEEEeeccccCCccceeeEEchhhhhcCC---CCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988866666666 567999999999999999999999999999999999999999999999
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHH
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~ 402 (411)
..+++....++|.|+++.+++.... .+..+.+.+.++|+++.+.+.+.+|+ |+.+|+++++++++
T Consensus 324 ~~~~~~v~~vRG~GLmiGiel~~~~-------------~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~ 390 (404)
T COG4992 324 KRRYPLVKEVRGRGLMIGIELKEPY-------------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALD 390 (404)
T ss_pred hhcCCceeeeecceeEEEEEecCcc-------------cHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHH
Confidence 9999988999999999999996431 34789999999999999999888887 79999999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|++++..
T Consensus 391 ~l~~~l~~ 398 (404)
T COG4992 391 ALERALAA 398 (404)
T ss_pred HHHHHHHH
Confidence 99999875
No 3
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-66 Score=474.99 Aligned_cols=392 Identities=30% Similarity=0.466 Sum_probs=337.0
Q ss_pred cccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCC-CHHHHHHHHHHH
Q 015230 10 RAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAP-CLLENVLAEMVI 86 (411)
Q Consensus 10 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~-~~~~~~l~~~l~ 86 (411)
|++... ..|+++.++.|+++||.|||+||||.++.++.++||+||.|++|+.+++++..+ +.+. .+...+++++|.
T Consensus 31 r~~~~~-~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~ 109 (447)
T COG0160 31 RSYGRF-RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLT 109 (447)
T ss_pred cccccc-cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHH
Confidence 444432 469999999999999999999999999999999999999999999999999642 2333 388899999999
Q ss_pred hhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcc-cCC-CCCCCCCCCCCCce
Q 015230 87 SAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT-LGL-PDSPGVPKGATYET 162 (411)
Q Consensus 87 ~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~-~~~-~~~~~~~~~~~~~~ 162 (411)
+..+ +.+.++|++||+||++.|+|+++.++++..||.|.++|||.+..++.+++....+ ... +..+++...+....
T Consensus 110 ~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~ 189 (447)
T COG0160 110 ALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNP 189 (447)
T ss_pred HhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCcc
Confidence 9998 4789999999999999999999999999999999999999999999999875443 222 22222333333444
Q ss_pred eecCCC---------CHHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-
Q 015230 163 LTAPFN---------DVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229 (411)
Q Consensus 163 ~~~~~~---------d~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~- 229 (411)
++.++. ..+.+++.+.. .+++++++|+||+++++|.+.++++|+++++++|+|||+++|+||||+||
T Consensus 190 yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~G 269 (447)
T COG0160 190 YRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFG 269 (447)
T ss_pred ccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 444432 24445654543 45689999999999999999999999999999999999999999999999
Q ss_pred ccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 230 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 230 ~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
|+|.+|+++++++.||++|+||++++|+|+|.+++++++.+ .. +..+++||.+||++++++.+.|+.++++++.++
T Consensus 270 RTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~---~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~ 345 (447)
T COG0160 270 RTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WP---PGGHGGTFGGNPVACAAALAVLDVIEEENLLER 345 (447)
T ss_pred ccccchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cC---CcccCCCCCcCHHHHHHHHHHHHHHHHccHHHH
Confidence 99999999999999999999999999999999999999987 44 455777999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Cccee
Q 015230 310 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF 387 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~ 387 (411)
..+.+++++++|.++..+++.+.+++|.|+|+.+++.++.. .+.|+...+.++.+.++++|+++..++ .+.+|
T Consensus 346 a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~-----t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviR 420 (447)
T COG0160 346 AAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRD-----TKEPDAELAAKIVARAFERGLLLLTCGPHGNVLR 420 (447)
T ss_pred HHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCC-----CCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEE
Confidence 99999999999999999999999999999999999976421 122566788999999999999998887 56666
Q ss_pred e--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 388 T--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 388 ~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+ |+++|++++|+++++|+++++++
T Consensus 421 i~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 421 ILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 5 89999999999999999998763
No 4
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=2e-64 Score=478.74 Aligned_cols=411 Identities=86% Similarity=1.390 Sum_probs=351.7
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~ 80 (411)
||+|+++.+|.+...+..|+++.+++|+++||.||++|+||.+++++..+||+||++.+++.++++++..++.+.+...+
T Consensus 64 ~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~ 143 (474)
T PLN02482 64 MPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENV 143 (474)
T ss_pred CCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHH
Confidence 79999999999977667799999999999999999999999999999999999999999999999998777778888999
Q ss_pred HHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCC
Q 015230 81 LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY 160 (411)
Q Consensus 81 l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (411)
+++.+.+..++.+++.|++||+||++.|++++|.++++.+||.+.++|||+++......+.+......+...+.+.....
T Consensus 144 lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 223 (474)
T PLN02482 144 LAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATS 223 (474)
T ss_pred HHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCC
Confidence 99999999988899999999999999999999999999999999999999887665544333222222334444444445
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCcccccc
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~ 240 (411)
.+..+++||++++++.++++++++++||+||+++++|.+.|+++|+++|+++|++||+++|+||+++|||+|..++.+++
T Consensus 224 ~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~ 303 (474)
T PLN02482 224 ATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYF 303 (474)
T ss_pred CeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHh
Confidence 67889999999999999877778999999999999999999999999999999999999999999999988888888889
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 320 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
++.||++|++|+++||+|+|++.+++++++.+.+....++++|++++|++++++.++|+.+++++++++++++.++++++
T Consensus 304 gv~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~ 383 (474)
T PLN02482 304 GITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQG 383 (474)
T ss_pred CCCCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988654456678899999999999999999998889999999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 400 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~ 400 (411)
|+++..+++......+.+.++.+++...+..++.....++......+.+.|+++||++.+.+++...+++.+|++|||++
T Consensus 384 L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~~psl~ht~~dId~~ 463 (474)
T PLN02482 384 ILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAGFTSLAHTEEDIDFT 463 (474)
T ss_pred HHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCCcCCCCCCHHHHHHH
Confidence 99998776544333343447788776554433333333344456788999999999999875443347899999999999
Q ss_pred HHHHHHHHHhC
Q 015230 401 ITAAEKVLRQI 411 (411)
Q Consensus 401 i~~l~~~~~~~ 411 (411)
+++++++++++
T Consensus 464 l~al~~~l~~~ 474 (474)
T PLN02482 464 IAAAERVLARI 474 (474)
T ss_pred HHHHHHHHHhC
Confidence 99999999864
No 5
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.4e-63 Score=468.80 Aligned_cols=410 Identities=50% Similarity=0.920 Sum_probs=351.4
Q ss_pred CCCCccCcccccccCC-CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHH
Q 015230 1 MPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLEN 79 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 79 (411)
+|+|+++..|.+...+ ..|+++.+++|+++||.||++|+||.+++++..+||+||++.+|+.++++++..+.++++...
T Consensus 17 ~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~ 96 (428)
T PRK12389 17 IVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGTPTELEI 96 (428)
T ss_pred CCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCccCCCCHHHH
Confidence 6999999999885443 568999999999999999999999999999999999999999999999998766667788899
Q ss_pred HHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCC
Q 015230 80 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGAT 159 (411)
Q Consensus 80 ~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (411)
+++++|.+..++.++++|++||+||++.|+++++.++++.+||.+.++|||.+..++...+........+...++.....
T Consensus 97 ~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (428)
T PRK12389 97 EFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIA 176 (428)
T ss_pred HHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCccc
Confidence 99999999888788999999999999999999999999999999999999999998888765433222233334433334
Q ss_pred CceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccc
Q 015230 160 YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEY 239 (411)
Q Consensus 160 ~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~ 239 (411)
.++..++++|++.+++.++++++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+++|||++..++.++
T Consensus 177 ~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~ 256 (428)
T PRK12389 177 QEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDL 256 (428)
T ss_pred CceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHH
Confidence 56788999999999999987667899999999999999999999999999999999999999999999997776677778
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.||++|++|+++||+|+|.+++++++++.+......++++|+++||++++++++.++.++++++.++++++++++++
T Consensus 257 ~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~ 336 (428)
T PRK12389 257 LGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEE 336 (428)
T ss_pred hCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999998864334567889999999999999999999888899999999999999
Q ss_pred HHHHHHHhcCCceEE-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHH
Q 015230 320 GIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQ 398 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~ 398 (411)
.|+++..+++....+ ++.| ++.+++......++.....++...+..+.+.|+++||++.+.+.+.+.+++.+|++|++
T Consensus 337 ~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~l~~t~e~id 415 (428)
T PRK12389 337 GILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKYEAWFLTTAHTEEDIE 415 (428)
T ss_pred HHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCCCCeeecCCCCHHHHH
Confidence 999998888877777 4455 77888865433222111112334467889999999999998766667789999999999
Q ss_pred HHHHHHHHHHHhC
Q 015230 399 HTITAAEKVLRQI 411 (411)
Q Consensus 399 ~~i~~l~~~~~~~ 411 (411)
+++++++++++++
T Consensus 416 ~~~~~l~~~l~~~ 428 (428)
T PRK12389 416 ETLEAVDRAFAQL 428 (428)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999864
No 6
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=6.5e-61 Score=451.57 Aligned_cols=407 Identities=40% Similarity=0.669 Sum_probs=343.7
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~ 80 (411)
+|+|+++..|.+...+..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++..+..+++...+
T Consensus 18 ~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~ 97 (433)
T PRK00615 18 FPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSYGLTSEQEIL 97 (433)
T ss_pred CCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 69999999998866666799999999999999999999999999999999999999999999999987666677888899
Q ss_pred HHHHHHhhCCC-CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh---hhhhcCCCCcccCCCCCCCCCC
Q 015230 81 LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP---FLVKAGSGVATLGLPDSPGVPK 156 (411)
Q Consensus 81 l~~~l~~~~~~-~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~ 156 (411)
+++.|.+..+. .+++.|++||+||++.|+++++.++++.+|+.+.++|||+++. +....+..... .+...+ +.
T Consensus 98 la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~--~~~~~~-~~ 174 (433)
T PRK00615 98 FAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDT--LTHLVD-TD 174 (433)
T ss_pred HHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCc--CCCCCC-CC
Confidence 99999999873 5799999999999999999999999999999999999998743 33333321100 000111 11
Q ss_pred CCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCcc
Q 015230 157 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGA 236 (411)
Q Consensus 157 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~ 236 (411)
........++++|++++++.++++.+++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|||+|.+++
T Consensus 175 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G~~ga 254 (433)
T PRK00615 175 LAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGA 254 (433)
T ss_pred CCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccccccHhHH
Confidence 11233456789999999999987667899999999999999999999999999999999999999999999998888888
Q ss_pred ccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015230 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316 (411)
Q Consensus 237 ~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 316 (411)
.+++++.||++++||+++||+|+|++++++++++.+......++++|++++|+++++++++++.+++++++++++++.++
T Consensus 255 ~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~ 334 (433)
T PRK00615 255 AAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQN 334 (433)
T ss_pred HHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 88899999999999999999999999999999998864444567789999999999999999999888899999999999
Q ss_pred HHHHHHHHHHhcCC-ceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHH
Q 015230 317 LTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSD 395 (411)
Q Consensus 317 ~~~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~ 395 (411)
++++|+++..+.+. ....+ .|+++.+++.....+++......+......+.+.|.++||++.+..++...++..+|++
T Consensus 335 l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ls~~ht~~ 413 (433)
T PRK00615 335 FLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLSSAHSME 413 (433)
T ss_pred HHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCccccccceecCCCHH
Confidence 99999998776444 33444 89999999976554444333333445567899999999999998876666788999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 015230 396 DIQHTITAAEKVLRQI 411 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~~ 411 (411)
|||+++++++++++++
T Consensus 414 did~~~~a~~~~~~~~ 429 (433)
T PRK00615 414 NLDYAQNVLIDSLEKV 429 (433)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 7
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-61 Score=440.74 Aligned_cols=402 Identities=27% Similarity=0.334 Sum_probs=335.2
Q ss_pred ccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHH
Q 015230 5 VNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVL 81 (411)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l 81 (411)
+|++.-.+.+....|.++.+++|.+++|.+|++|+|.+|+||+++.||++|++.+|+.+++++... .+++.+...+|
T Consensus 13 ~whP~t~~~~~~~~~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~L 92 (449)
T COG0161 13 LWHPFTQMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIEL 92 (449)
T ss_pred eeccccccccccccceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHH
Confidence 567666666554338899999999999999999999999999999999999999999999999543 34556668999
Q ss_pred HHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcC-CCCc-ccCCCCC
Q 015230 82 AEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAG-SGVA-TLGLPDS 151 (411)
Q Consensus 82 ~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g-~~~~-~~~~~~~ 151 (411)
+++|.+..| + .++|+|++|||+|++.|||+++.| +++.++|...++|||.+.+++..+| ...+ ....+..
T Consensus 93 A~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll 172 (449)
T COG0161 93 AEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLL 172 (449)
T ss_pred HHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccc
Confidence 999999998 6 999999999999999999999876 2356799999999999999999888 3333 1111112
Q ss_pred CCCCCCCCCceeecCC---------CCHHHHHHHHHcCC-CcEEEEEEcccCCC-CCccCCCHHHHHHHHHHHHHhCCEE
Q 015230 152 PGVPKGATYETLTAPF---------NDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALL 220 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~---------~d~~~l~~~~~~~~-~~~~~vi~~~~~~~-~G~~~~~~~~l~~i~~l~~~~~~~l 220 (411)
.+..+-.....+..+. ...++|++.+.++. +++++||+||+.+. ||++.|++.|+++++++|++||+++
T Consensus 173 ~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILl 252 (449)
T COG0161 173 PEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILL 252 (449)
T ss_pred cCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEE
Confidence 2111111111111111 23677888888765 89999999998888 9999999999999999999999999
Q ss_pred EEecccccc-ccccCccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcC--CCCcccccCCCCCHHHHHHHHH
Q 015230 221 IFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIH 296 (411)
Q Consensus 221 i~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~--~~~~~~~~t~~~~~~~~a~~~~ 296 (411)
|+|||.+|| |+|++|+.+++++.||++|++|++++| +|+|++.+++++.+.+.. ....+|+.|++++|++||++++
T Consensus 253 I~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla 332 (449)
T COG0161 253 IADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALA 332 (449)
T ss_pred EeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHH
Confidence 999999999 999999999999999999999999999 799999999999999875 4567899999999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCe
Q 015230 297 TLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 376 (411)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 376 (411)
.|+++++++++++.++...++.+.|+++...+|.+.++++.|++..+++..+..+.... +.....++.+.+.++|+
T Consensus 333 ~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f----~~~~~~~~~~~~~e~Gl 408 (449)
T COG0161 333 NLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF----EARVGARVRAAALERGL 408 (449)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch----hhhHHHHHHHHHHHCCe
Confidence 99999999999999999999999999966667899999999999999997643211100 23446789999999999
Q ss_pred EeccCCCcc-eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 377 YFAPSQFEA-GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 377 ~v~~~~~~~-~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+++|.+.-. +.+|+++|++|++++++++.+++++
T Consensus 409 ~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 409 LIRPLGDVIYLMPPLIITREEIDELVDALREALDE 443 (449)
T ss_pred EEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 999996422 2347999999999999999999875
No 8
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-60 Score=414.97 Aligned_cols=386 Identities=27% Similarity=0.345 Sum_probs=335.5
Q ss_pred ccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHHHHHHHHHHhhCC
Q 015230 13 KSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVP 90 (411)
Q Consensus 13 ~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~l~~~l~~~~~ 90 (411)
......|.+|.+++|+|+||.+|++|+|+.++.++..+||+||++.+++.+++.... ...+.++...++++.|.+.+|
T Consensus 27 ~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~Ae~L~s~~P 106 (442)
T KOG1404|consen 27 TSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDLAEALVSKLP 106 (442)
T ss_pred eccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeeccccCCcHHHHHHHHHHhCC
Confidence 334457999999999999999999999999999999999999999999999998743 346778889999999999998
Q ss_pred -CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC-CCCCCCCCceeecCCC
Q 015230 91 -SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPFN 168 (411)
Q Consensus 91 -~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 168 (411)
+.+.++|+|||+||+++||++++.|++.-++|.+.++|||.+..++.+++...++.+.+... +..+-..+++++.++.
T Consensus 107 ~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~ 186 (442)
T KOG1404|consen 107 GDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFG 186 (442)
T ss_pred CCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCC
Confidence 79999999999999999999999999999999999999999999999999888887766542 4433344455555543
Q ss_pred C----------HHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 169 D----------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 169 d----------~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
+ .+++++.+.. .+++++++++|++++.+|++.+++.|+++..++|+++|.++|.||||+|| |+|.++.
T Consensus 187 ~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wg 266 (442)
T KOG1404|consen 187 GSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWG 266 (442)
T ss_pred CCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccccccc
Confidence 2 2344444443 45789999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015230 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316 (411)
Q Consensus 237 ~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 316 (411)
++..++.|||+|++|++++|.|+|++++++++.+-+.+.. .+++|++++|++|+++.++|+.+++++++++..+.+.+
T Consensus 267 fe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~--~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~y 344 (442)
T KOG1404|consen 267 FESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKS--SHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSY 344 (442)
T ss_pred ccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHhcc--ccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887532 26789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceee--ecCC
Q 015230 317 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAH 392 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~~~ 392 (411)
++++|.++.++++++.+++|+|+++.+++.+..... +.|.......+.+.++++|++|.-++. +.+|| |+++
T Consensus 345 l~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~----~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlci 420 (442)
T KOG1404|consen 345 LLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEP----KPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCI 420 (442)
T ss_pred HHHHHHHHhhcCCceeecccceeEEEEEEecccCCC----CCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeec
Confidence 999999999999999999999999999997764322 225556667899999999999977642 34666 7999
Q ss_pred CHHHHHHHHHHH
Q 015230 393 SSDDIQHTITAA 404 (411)
Q Consensus 393 t~~~i~~~i~~l 404 (411)
|++|++.+++..
T Consensus 421 T~edi~f~~~~~ 432 (442)
T KOG1404|consen 421 TKEDIDFAVEYF 432 (442)
T ss_pred cHHHHHHHHHHH
Confidence 999998887755
No 9
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=2.8e-59 Score=446.20 Aligned_cols=411 Identities=60% Similarity=1.017 Sum_probs=346.8
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~ 80 (411)
||+|+.+..|.++..+..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++..+.++.+...+
T Consensus 13 ~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~ 92 (423)
T TIGR00713 13 FPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEIL 92 (423)
T ss_pred CCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHHH
Confidence 79999998887765556799999999999999999999999999999999999999999999999987666667778899
Q ss_pred HHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCC
Q 015230 81 LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY 160 (411)
Q Consensus 81 l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (411)
+++.+++.++..++++|++||+||++.|+++++.++++++||.+.++|||.+......++.+......+...+.+.....
T Consensus 93 lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (423)
T TIGR00713 93 LAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAK 172 (423)
T ss_pred HHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCccccc
Confidence 99999999886789999999999999999999999999999999999999987777655443222212222333333334
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCcccccc
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~ 240 (411)
....++++|++++++.++++++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+||++|..+..+++
T Consensus 173 ~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~ 252 (423)
T TIGR00713 173 LTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYF 252 (423)
T ss_pred ceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHh
Confidence 57788899999999999866568999999999999999988899999999999999999999999999977766667778
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 320 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
++.||++||||++++|+|+||+++++++++.+.......+++|+++++++++++.++++.++++++.++++++.+++++.
T Consensus 253 ~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~ 332 (423)
T TIGR00713 253 GVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEG 332 (423)
T ss_pred CCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988743344567899999999999999999998777999999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 400 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~ 400 (411)
|+++..++++...+++.|+++.+++......++.....++...+..+.+.|.++||++.+.+++.+++.+.+|+++++++
T Consensus 333 l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~~t~~~i~~~ 412 (423)
T TIGR00713 333 LSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFLSAAHTEEDIENT 412 (423)
T ss_pred HHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceeeECCCCHHHHHHH
Confidence 99988888888888899999999886433222111111233345678889999999998776666788777999999999
Q ss_pred HHHHHHHHHhC
Q 015230 401 ITAAEKVLRQI 411 (411)
Q Consensus 401 i~~l~~~~~~~ 411 (411)
+++|++++++|
T Consensus 413 ~~~l~~~l~~~ 423 (423)
T TIGR00713 413 IEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHHhhC
Confidence 99999999875
No 10
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.8e-59 Score=440.61 Aligned_cols=411 Identities=65% Similarity=1.094 Sum_probs=350.8
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~ 80 (411)
+|+|.+++.+.+++.+.+|+++.+++|.++||.+|++|+||.+++++.++||+||++.+++.++++++..+.+......+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~ 94 (426)
T PRK00062 15 IPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAPTELEVE 94 (426)
T ss_pred CCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCCCHHHHH
Confidence 59999999999998877789999999999999999999999999999999999999999999999986555567788899
Q ss_pred HHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCC
Q 015230 81 LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY 160 (411)
Q Consensus 81 l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 160 (411)
+++++.+.+++.++++|++||++|++.|+++++.++++++||.++++|||.+..+....+........+...+.+.....
T Consensus 95 la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (426)
T PRK00062 95 LAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAK 174 (426)
T ss_pred HHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccccc
Confidence 99999998877789999999999999999999998889999999999999987777665543211111211222111123
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCcccccc
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~ 240 (411)
....++++|++++++.+++.++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|+++|.++..+++
T Consensus 175 ~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~ 254 (426)
T PRK00062 175 HTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYY 254 (426)
T ss_pred ceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHh
Confidence 46778899999999999866678999999999999999999999999999999999999999999999977777777788
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 320 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
++.||++++||++++|+|+|++++++++++.+......++++|+++++++++++.++++.+++++++++++++.++++++
T Consensus 255 ~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK00062 255 GVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEG 334 (426)
T ss_pred CCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988644445677789999999999999999998888999999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 400 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~ 400 (411)
|+++..+++....+++.|+++.+++.......+.....++...+..+.+.|.++||++.+.+++.+++++++|+++++++
T Consensus 335 l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~~~~t~~ei~~~ 414 (426)
T PRK00062 335 LKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGFVSAAHTDEDIEKT 414 (426)
T ss_pred HHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCceeeeccCCHHHHHHH
Confidence 99988888888888999999999997543333222222344556789999999999999987777888999999999999
Q ss_pred HHHHHHHHHhC
Q 015230 401 ITAAEKVLRQI 411 (411)
Q Consensus 401 i~~l~~~~~~~ 411 (411)
+++|+++++++
T Consensus 415 ~~~l~~~l~~~ 425 (426)
T PRK00062 415 LEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 11
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=1.3e-58 Score=438.90 Aligned_cols=403 Identities=28% Similarity=0.430 Sum_probs=334.1
Q ss_pred CCCCc-cCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHH
Q 015230 1 MPGGV-NSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLEN 79 (411)
Q Consensus 1 ~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 79 (411)
||+|+ ++..|.++ ...|+++.+++|+++||.||++|+||.+++++..+||+||++.+++.++++++..+.++++...
T Consensus 41 ~p~g~~~~~~~~~~--~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~~~~~~~~~ 118 (453)
T PRK07046 41 LLGGVPMHWMNDWP--TPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPSEDAA 118 (453)
T ss_pred CCCCcccccccccC--CCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCCCCCCHHHH
Confidence 79999 55556663 2579999999999999999999999999999999999999999999999999776777889999
Q ss_pred HHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCC
Q 015230 80 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGAT 159 (411)
Q Consensus 80 ~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 159 (411)
++++.+.+.. +.+++.|++||+||++.|++++|.++++.+|+.+.++|||+++..+.....+. ....+...+.+....
T Consensus 119 ~lAe~l~~~~-~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~-~~~~~~~~g~~~~~~ 196 (453)
T PRK07046 119 WVGEELARRF-GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGR-PVQRPGLLGQVHDLT 196 (453)
T ss_pred HHHHHHHHHh-CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCC-CCCCCCCCCCCcccc
Confidence 9999999988 48899999999999999999999999999999999999999876664321110 001122223333333
Q ss_pred CceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccc
Q 015230 160 YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEY 239 (411)
Q Consensus 160 ~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~ 239 (411)
.++..+++||++.+++.+. .+++++||+||+++++|.+.++++|+++|+++|++||+++|+||+++ ||.|.....++
T Consensus 197 ~~~~~~~~nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~ 273 (453)
T PRK07046 197 ATTRVVEFNDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRA 273 (453)
T ss_pred CceEeeCCCCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHH
Confidence 4577889999999999985 36899999999999999999999999999999999999999999998 64443345667
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCC------CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA------GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKI 313 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~------~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~ 313 (411)
+++.||+++++|+++||+|+|++.+++++++.+.+. ....+++||+++|++++++.+.++.++++++.++++++
T Consensus 274 ~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~ 353 (453)
T PRK07046 274 HGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLAL 353 (453)
T ss_pred hCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 899999999999999999999999999999887531 22346789999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhccc-chHHHHHHHHHHHHcCeEeccCCCcceeeecCC
Q 015230 314 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS-ETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAH 392 (411)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~ 392 (411)
+++++++|+++..+++....+++.|.++.+.+.+....++.....+ +......+...|.++||++.+.+ +.++++..+
T Consensus 354 g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~-~~~~~~p~~ 432 (453)
T PRK07046 354 AARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPFH-NMMLVCPAT 432 (453)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEeccc-CcEEEeCCC
Confidence 9999999999988888888999999998888754333222111111 23345678888999999998854 455666679
Q ss_pred CHHHHHHHHHHHHHHHHhC
Q 015230 393 SSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 393 t~~~i~~~i~~l~~~~~~~ 411 (411)
|++||++++++++++++++
T Consensus 433 t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 433 TAADVDRLVAAFDACLGEL 451 (453)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 12
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-58 Score=439.57 Aligned_cols=392 Identities=25% Similarity=0.357 Sum_probs=324.4
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCC-CCC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. ..+..+...+++++|.+..+ +.+
T Consensus 34 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 113 (451)
T PRK06062 34 INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLS 113 (451)
T ss_pred CCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCC
Confidence 358999999999999999999999999999999999999999999999998543 34568888999999999987 478
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC---CC-
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---ND- 169 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d- 169 (411)
+++|++||+||++.||++++.++++.+||.+.++|||.+..++..++........+...++........+..++ +|
T Consensus 114 ~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 193 (451)
T PRK06062 114 KVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEE 193 (451)
T ss_pred EEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChH
Confidence 99999999999999999999999999999999999999999998877543221111122221111111222222 23
Q ss_pred ------HHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC
Q 015230 170 ------VSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 241 (411)
Q Consensus 170 ------~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~ 241 (411)
++++++.++.. ++++++|++||+++++|++.++++|+++|+++|++||+++|+|||++|| |+|.+++.++++
T Consensus 194 ~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~g 273 (451)
T PRK06062 194 EECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFG 273 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcC
Confidence 67788888653 3679999999999999999999999999999999999999999999999 999999999999
Q ss_pred CCcchhhhhhhccCCc-ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH-HHHHH
Q 015230 242 VTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT-GELTQ 319 (411)
Q Consensus 242 ~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~-~~~~~ 319 (411)
+.||+++++|++++|+ |+|.+++++++++.+.. ....+++||+++|++|+++.++|+.++++++.++.++.+ .++++
T Consensus 274 v~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~ 352 (451)
T PRK06062 274 VVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-RPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGP 352 (451)
T ss_pred CCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 9999999999999995 99999999999888863 233567799999999999999999998888999999998 69999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCC--CCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPV--YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSD 395 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~ 395 (411)
.|+++..+++.+.++++.|+++.+++.++.. .++.... ........+.+.|+++||++.+.+ +.+++ |+.+|++
T Consensus 353 ~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~Gvl~~~~~-~~lrl~ppl~~t~~ 430 (451)
T PRK06062 353 GLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYG-ASSAAMAAVKAACKERGLLPFVNG-NRIHVVPPCTVTED 430 (451)
T ss_pred HHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccc-hhhHHHHHHHHHHHHCCcEEeecC-CEEEEECCccCCHH
Confidence 9999988888888999999999999964321 1110000 012245688999999999987643 45555 6799999
Q ss_pred HHHHHHHHHHHHHHhC
Q 015230 396 DIQHTITAAEKVLRQI 411 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~~ 411 (411)
+||+++++|+++++++
T Consensus 431 eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 431 EVREGLAILDAALAVA 446 (451)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 13
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-58 Score=438.49 Aligned_cols=373 Identities=26% Similarity=0.383 Sum_probs=323.8
Q ss_pred CCCeEEEeecC-cEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCC-CC
Q 015230 17 GQPIVFDSVKG-SHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 17 ~~~~~~~~~~g-~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
..|+++.+++| +++||.||++|+||.+++++.++||+||++.+|+.++++++..+ .+..+...++++.|.+..+ +.
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~ 141 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKL 141 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCC
Confidence 45789999999 99999999999999999999999999999999999999985433 3568888999999999987 57
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccC---CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 169 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~---~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 169 (411)
++++|++||+||++.|+++++.+++ +.+||++.++|||++..++..++......++ .+.. ..+..+|++|
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~--~~~~-----~~~~~~~~~d 214 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF--MPLL-----PGFRHVPFGN 214 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC--CCCC-----CCCcccCCCC
Confidence 8999999999999999999998874 6689999999999999998887764333211 1111 2355678889
Q ss_pred HHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc
Q 015230 170 VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 170 ~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d 245 (411)
.+++++.++. .++++++|++||+++++|.+.++++|+++++++|++||+++|+||+|+|| |+|.+++.+++++.||
T Consensus 215 ~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD 294 (459)
T PRK11522 215 IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD 294 (459)
T ss_pred HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC
Confidence 9999988864 34679999999999999999999999999999999999999999999999 9999989999999999
Q ss_pred hhhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 246 ~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
++++||++++| +|+|++++++++++.+.. .+..+++|++++|++++++.++++.++++++.++++++++++++.|+++
T Consensus 295 ivt~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 295 ILCLAKALGGGVMPIGATIATEEVFSVLFD-NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred EEEechhhhCCCccceeEEEcHHHHHHhcc-CCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 699999999998887742 2446788999999999999999999988899999999999999999999
Q ss_pred HHhcC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHHHHHH
Q 015230 325 GKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQH 399 (411)
Q Consensus 325 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~~i~~ 399 (411)
..+++ .+.++++.|+++.+++.+. .....+.+.|+++||++.+.. .+.+|+ ++++|++++++
T Consensus 374 ~~~~~~~i~~VrG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~ 440 (459)
T PRK11522 374 AREYPDLVQEARGKGMLMAIEFVDN-------------EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQ 440 (459)
T ss_pred HHhCCCceeeEEeceeEEEEEecCc-------------hHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHH
Confidence 88887 6789999999999999532 234678999999999998753 344554 78999999999
Q ss_pred HHHHHHHHHHh
Q 015230 400 TITAAEKVLRQ 410 (411)
Q Consensus 400 ~i~~l~~~~~~ 410 (411)
++++|.+++++
T Consensus 441 ~l~~l~~~l~~ 451 (459)
T PRK11522 441 VLKAARKALAA 451 (459)
T ss_pred HHHHHHHHHHH
Confidence 99999998865
No 14
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-58 Score=439.91 Aligned_cols=391 Identities=22% Similarity=0.266 Sum_probs=320.0
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.+++++... +.+.++...++++.|.+..+ +.
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 107 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL 107 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc
Confidence 47899999999999999999999999999999999999999999999998542 24567888899999999987 67
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
++++|++||+||++.|||++|.+ +++.+||.+.++|||.+..+...++.......+ +...+.........+..
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRN 187 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccc
Confidence 89999999999999999999987 347789999999999998887777654322211 11111100000001111
Q ss_pred CC-CC--------HHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 166 PF-ND--------VSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 166 ~~-~d--------~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
+. +| ++++++.+++. ++++++||+||+++++|++.++++|+++|+++|++||+++|+|||++|| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~ 267 (459)
T PRK05965 188 PVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL 267 (459)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh
Confidence 11 23 35778888754 3689999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
++.+++++.||++|++|+++|| +|+|.+++++++++.+... ....+++|++++|++|+++.++++.++++++.++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 347 (459)
T PRK05965 268 FACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLAN 347 (459)
T ss_pred hhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999999 5999999999998887532 1245788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee-
Q 015230 310 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 388 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~- 388 (411)
.++++.++++.|+++. +++.+.++++.|+++.+++....... ....+....+..+.+.++++|+++.+.+.+.+++
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~ 424 (459)
T PRK05965 348 GQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATK--TPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFA 424 (459)
T ss_pred HHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEecccccc--CCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEE
Confidence 9999999999999985 57888999999999999996432110 0000112345778899999999998876555554
Q ss_pred -ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 -SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
|+++|++++++++++|.++++++
T Consensus 425 PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 425 PALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999998763
No 15
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=2.4e-58 Score=434.17 Aligned_cols=369 Identities=27% Similarity=0.391 Sum_probs=317.5
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC--CCCHHHHHHHHHHHhhCC-CCCEE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVP-SIEMV 95 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~--~~~~~~~~l~~~l~~~~~-~~~~v 95 (411)
.+++.++.|+|+||.||++|+||.+++++.++||+||++.+|+.++++++.... ...+...+++++|.+..+ ..+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 444567777999999999999999999999999999999999999999854332 457888999999999987 46899
Q ss_pred EEeCChHHHHHHHHHHHHhcc---CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHH
Q 015230 96 RFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSA 172 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~---~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 172 (411)
+|++||+||++.|+++++.++ ++.+||++.++|||.+..++..++......... + ....+..+|++|.+.
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~-----p--~~~~~~~~p~~d~~~ 210 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM-----P--LLPGFHHVAFGDIEA 210 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC-----C--CCCCCEEeCCCCHHH
Confidence 999999999999999999885 678999999999999999988877633221110 0 012356788889998
Q ss_pred HHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhh
Q 015230 173 LENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 248 (411)
Q Consensus 173 l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~ 248 (411)
+++.+++ +++++++|++||+++++|++.++++|+++++++|++||+++|+||+|+|| |+|.+++.+++++.||+++
T Consensus 211 ~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt 290 (442)
T TIGR03372 211 MLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC 290 (442)
T ss_pred HHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee
Confidence 8888863 45689999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 249 LGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 249 ~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
+||++++| +|+|.+++++++.+.+.. .+..+++|+++||++++++.++++.++++++.++.+++++++++.|+++..+
T Consensus 291 ~gK~lg~G~~Pigavv~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~ 369 (442)
T TIGR03372 291 LAKALGGGVMPIGATIATEAVFSVLFD-NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAE 369 (442)
T ss_pred ehhhhcCCcccceEEEecHHHHHhhhc-cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999 699999999999888742 2446788999999999999999999988899999999999999999999888
Q ss_pred cC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHHHHHHHHH
Q 015230 328 AG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 328 ~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~~i~~~i~ 402 (411)
++ .+.++++.|+++.+++.+. .....+.+.|+++||++.+.+ .+.+|+ |+++|++++|++++
T Consensus 370 ~~~~i~~vRG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~ 436 (442)
T TIGR03372 370 YPDLIIEARGKGLLMAIEFRDN-------------EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIK 436 (442)
T ss_pred CCCceEEEecceEEEEEEeCCh-------------HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHH
Confidence 88 6789999999999999532 234678999999999997653 245554 79999999999999
Q ss_pred HHHHHH
Q 015230 403 AAEKVL 408 (411)
Q Consensus 403 ~l~~~~ 408 (411)
+|++++
T Consensus 437 ~l~~~~ 442 (442)
T TIGR03372 437 AAKDAL 442 (442)
T ss_pred HHHHhC
Confidence 999864
No 16
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-58 Score=438.54 Aligned_cols=403 Identities=25% Similarity=0.300 Sum_probs=330.3
Q ss_pred ccCcccccccCC-CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC----CCCCHHHH
Q 015230 5 VNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF----GAPCLLEN 79 (411)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~----~~~~~~~~ 79 (411)
+|++...+..+. ..|+++.+++|+++||.||++|+||.+++++..+||+||++.+|+.++++++... ++.++...
T Consensus 10 ~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~ 89 (449)
T PRK07481 10 FWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAI 89 (449)
T ss_pred ccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHH
Confidence 677777666553 2589999999999999999999999999999999999999999999999985422 35688889
Q ss_pred HHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccC-CCC
Q 015230 80 VLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPD 150 (411)
Q Consensus 80 ~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~-~~~ 150 (411)
+++++|.+..+ +.++++|++||+||++.|+++++.++ ++.+||.+.++|||.+..++.+++....... .+.
T Consensus 90 ~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~ 169 (449)
T PRK07481 90 ELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPL 169 (449)
T ss_pred HHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCC
Confidence 99999999884 57899999999999999999999874 5788999999999999988877765432211 122
Q ss_pred CCCCCCCCCCceeecCCC--CHHHH--------HHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 015230 151 SPGVPKGATYETLTAPFN--DVSAL--------ENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 219 (411)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~--d~~~l--------~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~ 219 (411)
..++..........++++ |.+.+ ++.+. ++++++++|++||+++++|.+.++++|+++|+++|++||++
T Consensus 170 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~l 249 (449)
T PRK07481 170 LPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGIL 249 (449)
T ss_pred CCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCE
Confidence 233322222233344554 54443 44443 34578999999999999999999999999999999999999
Q ss_pred EEEecccccc-ccccCccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHH
Q 015230 220 LIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTA 293 (411)
Q Consensus 220 li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~ 293 (411)
+|+||+++|| |+|.+++.+++++.||+++++|+++|| +|+|.+++++++++.+... ....+++|++++|+++++
T Consensus 250 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa 329 (449)
T PRK07481 250 LIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAA 329 (449)
T ss_pred EEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHH
Confidence 9999999999 999999999999999999999999999 5999999999998887532 234578899999999999
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC-CCcchhcccchHHHHHHHHHHH
Q 015230 294 GIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGML 372 (411)
Q Consensus 294 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~ 372 (411)
+.++++.++++++.+++++.++++++.|+++..+++.+.++++.|+++.+++..+.. ... ..+.......+.+.++
T Consensus 330 a~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~---~~~~~~~~~~~~~~~~ 406 (449)
T PRK07481 330 ALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREP---IDPSKGYANAVADVAR 406 (449)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCC---CCchhHHHHHHHHHHH
Confidence 999999998899999999999999999999988889999999999999999964321 100 0011234567888999
Q ss_pred HcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 373 EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 373 ~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++|+++.+.+. .+++ |+++|+++||+++++|+++++++
T Consensus 407 ~~Gvl~~~~g~-~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 407 ENGVLVRPSGT-KIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred hCCeEEEecCC-EEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 99999988753 3444 68899999999999999998764
No 17
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2.7e-58 Score=438.16 Aligned_cols=389 Identities=24% Similarity=0.326 Sum_probs=322.4
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++... .+.++...++++.|.+..+..+++
T Consensus 29 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v 108 (451)
T PRK07678 29 ATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQSHEPAIKLAEKLNEWLGGEYVI 108 (451)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCccccccCCHHHHHHHHHHHHhCCCCCEE
Confidence 488999999999999999999999999999999999999999999999985432 356778899999999998766799
Q ss_pred EEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecCC-
Q 015230 96 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF- 167 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 167 (411)
+|++||+||++.||++++.++ ++.+||.+.++|||++..++..++.......+ +...++...........++
T Consensus 109 ~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (451)
T PRK07678 109 FFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGI 188 (451)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccccccc
Confidence 999999999999999999875 46789999999999999998887754332221 2222322111222233322
Q ss_pred -----CC---HHHHHHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccc
Q 015230 168 -----ND---VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 237 (411)
Q Consensus 168 -----~d---~~~l~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~ 237 (411)
+| ++.+++.++ .+++++++||+||+++++|.+.++++|+++++++|++||+++|+|||++|| |+|.+++.
T Consensus 189 ~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~ 268 (451)
T PRK07678 189 ESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGF 268 (451)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHH
Confidence 12 234566675 345789999999999999999999999999999999999999999999999 99998889
Q ss_pred cccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCCC---CcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015230 238 EYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG---PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKI 313 (411)
Q Consensus 238 ~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~---~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~ 313 (411)
+++|+.||++|++|+++|| +|+|.+++++++++.+.... ...+++|++++|++|+++.++++.++++++.++++++
T Consensus 269 ~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~ 348 (451)
T PRK07678 269 MNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQL 348 (451)
T ss_pred HhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999999988 79999999999998886321 2457889999999999999999999888999999999
Q ss_pred HHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhccc-chHHHHHHHHHHHHcCeEeccCC------Ccce
Q 015230 314 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS-ETTKFARFYRGMLEEGVYFAPSQ------FEAG 386 (411)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~~------~~~~ 386 (411)
++++++.|+++..+++.+.++++.|+++.+++..+... ..+ +...+..+.+.|+++|+++.+.+ .+.+
T Consensus 349 g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~-----~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~l 423 (451)
T PRK07678 349 GELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKET-----KEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVL 423 (451)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcc-----cCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEE
Confidence 99999999988788888899999999999999643211 111 23446788999999999997643 1445
Q ss_pred ee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 387 FT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 387 ~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++ ++++|++||++++++++++++++
T Consensus 424 rl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 424 TLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 55 68899999999999999998764
No 18
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-58 Score=439.40 Aligned_cols=389 Identities=20% Similarity=0.227 Sum_probs=319.8
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.|||+|+||.+++++.++||+||++.+|+.++++++.. ..+.++...++++.|.+..+ +.
T Consensus 32 ~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~ 111 (461)
T PRK07482 32 PGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM 111 (461)
T ss_pred CCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 48899999999999999999999999999999999999999999999998642 24668889999999999987 58
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
++++|++||+||++.|||+++.+ +++.+||.+.++|||.+..+..+++.......+ +...+............
T Consensus 112 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (461)
T PRK07482 112 SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRR 191 (461)
T ss_pred CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccc
Confidence 99999999999999999999866 347889999999999998888777654332211 11111110000001110
Q ss_pred C----------CCCHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc
Q 015230 166 P----------FNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233 (411)
Q Consensus 166 ~----------~~d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~ 233 (411)
+ ..+++.+++.+.+ .++++++||+||+++++|++.++++|+++|+++|++||+++|+|||++|| |+|.
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~ 271 (461)
T PRK07482 192 ADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271 (461)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc
Confidence 0 1146778888853 35689999999999999999999999999999999999999999999999 9999
Q ss_pred CccccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
+++.+++++.||++|++|+++||+ |+|.+++++++.+.+... ....+++|+++||++|+++.++++.++++++.+
T Consensus 272 ~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~ 351 (461)
T PRK07482 272 MFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVG 351 (461)
T ss_pred hhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHH
Confidence 999999999999999999999995 999999999988877532 234578899999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC--CCcchhcccchHHHHHHHHHHHHcCeEeccCC-Ccc
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV--YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEA 385 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~ 385 (411)
+.+++++++++.|+++..+++.+.++++.|+++.+++.+... .++ ......+..+.+.++++|+++.+.. .+.
T Consensus 352 ~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~----~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~ 427 (461)
T PRK07482 352 NAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPF----DPALKIGPQVSAAALERGVIARAMPHGDI 427 (461)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCC----ChhhHHHHHHHHHHHHCCcEEecCCCCCE
Confidence 999999999999999988899999999999999999964321 110 0111235688999999999996542 344
Q ss_pred eee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 386 GFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 386 ~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+++ |+++|++||++++++|++++++
T Consensus 428 i~~~Ppl~it~~ei~~~~~~l~~~l~~ 454 (461)
T PRK07482 428 LGFAPPLVLTRAEADEIVAIAKDAVDE 454 (461)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 544 7999999999999999998865
No 19
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=2.6e-57 Score=433.99 Aligned_cols=403 Identities=24% Similarity=0.306 Sum_probs=323.2
Q ss_pred CccCcccccccCC-CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC----CCCCHHH
Q 015230 4 GVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF----GAPCLLE 78 (411)
Q Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~----~~~~~~~ 78 (411)
++|+++....+.. ..|+++.+++|+++||.||++|+||.+++|+.++||+||++.+|+.++++++..+ .+.++..
T Consensus 56 ~~~~p~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~ 135 (504)
T PLN02760 56 DMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPS 135 (504)
T ss_pred CcccCcccccccccCCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHH
Confidence 5777777766543 3589999999999999999999999999999999999999999999999985422 3567888
Q ss_pred HHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-C
Q 015230 79 NVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P 149 (411)
Q Consensus 79 ~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~ 149 (411)
.+++++|.+.++ +.++++|++||+||++.||++++.+ +++.+||+++++|||.+..++.++|.......+ +
T Consensus 136 ~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~ 215 (504)
T PLN02760 136 LDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDL 215 (504)
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCC
Confidence 999999999864 4679999999999999999999865 346789999999999988887777653322111 1
Q ss_pred CCCCCCCCCCCceee--cCCCC--------HHHHHHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCC
Q 015230 150 DSPGVPKGATYETLT--APFND--------VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 218 (411)
Q Consensus 150 ~~~~~~~~~~~~~~~--~~~~d--------~~~l~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~ 218 (411)
....+........+. ++..+ .+++++.+. +.++++++||+||+++++|++.++++|+++|+++|++||+
T Consensus 216 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~ 295 (504)
T PLN02760 216 PAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDI 295 (504)
T ss_pred CCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 111111100001111 11111 245777664 3456899999999999999999999999999999999999
Q ss_pred EEEEecccccc-ccccCccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHH
Q 015230 219 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMT 292 (411)
Q Consensus 219 ~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a 292 (411)
++|+|||++|| |+|.+++.+++++.||++|++|+++|| +|+|++++++++++.+... ....+++|++++|++|+
T Consensus 296 lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~A 375 (504)
T PLN02760 296 LFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCA 375 (504)
T ss_pred EEEecchhhCCcccchhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHH
Confidence 99999999999 999999999999999999999999988 5999999999999887532 12357889999999999
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH
Q 015230 293 AGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 372 (411)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 372 (411)
++.++++.++++++.++++++++++++.|+++ .+++++.++++.|+++.+++.+..... ....+....+..+.+.++
T Consensus 376 aala~Le~i~~~~l~~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~ 452 (504)
T PLN02760 376 VALEALKIYKERNIPEHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPN--DPFPAEWGVGAYFGAECK 452 (504)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCccc--ccccchhHHHHHHHHHHH
Confidence 99999999998999999999999999999998 667888999999999999996532110 000011234577889999
Q ss_pred HcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 373 EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 373 ~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
++||++.+.+ +.+++ ++++|++|||+++++|++++++
T Consensus 453 ~~Gvl~~~~g-~~lrl~Ppl~it~eeid~~~~~l~~al~~ 491 (504)
T PLN02760 453 KRGMLVRVAG-DNIMMSPPLIITPEEVDELISIYGKALKA 491 (504)
T ss_pred hCCcEEEecC-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999998765 34555 6889999999999999998875
No 20
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-57 Score=432.94 Aligned_cols=390 Identities=26% Similarity=0.389 Sum_probs=314.9
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHHHHHHHhhCCCC-
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSI- 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l~~~l~~~~~~~- 92 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. ..++++...++++.|.+..++.
T Consensus 39 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~ 118 (459)
T PRK06931 39 KLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQG 118 (459)
T ss_pred CCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCcc
Confidence 358999999999999999999999999999999999999999999999986332 2356788899999999998732
Q ss_pred ---CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecCCC
Q 015230 93 ---EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 93 ---~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 168 (411)
..+++++||+||++.||++++.++++.+||.+.++|||++..++.+++.......+ +..+++...+....+.++++
T Consensus 119 ~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK06931 119 KEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLG 198 (459)
T ss_pred ccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcccccccc
Confidence 23466699999999999999999999999999999999999998877653322111 11222221122223333332
Q ss_pred -----CHHHH----HHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc
Q 015230 169 -----DVSAL----ENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 235 (411)
Q Consensus 169 -----d~~~l----~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~ 235 (411)
+.+.+ ++.++. .++++++||+||+++++|.+.++++|+++|+++|++||+++|+|||++|| |+|.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~ 278 (459)
T PRK06931 199 IGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF 278 (459)
T ss_pred CCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH
Confidence 23333 333332 34579999999999999999999999999999999999999999999999 999999
Q ss_pred cccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015230 236 AQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITG 315 (411)
Q Consensus 236 ~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~ 315 (411)
+++++++.||+++++|+++||+|+|.+++++++ +.+. ...+++||++||++|+++.+.++.++++++.++.+++++
T Consensus 279 a~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~---~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~ 354 (459)
T PRK06931 279 AFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQ---PGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGE 354 (459)
T ss_pred HhhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhcc---CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999999999998877664 6554 345788999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC-CCcchhcccchHHHHHHHHHHHHcCeEeccCC--Cccee--eec
Q 015230 316 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF--TSL 390 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~--~~~ 390 (411)
++++.|+++..+++.+.++++.|+++.+++.++.. .+.......+...+..+.+.+.++|+++.+.+ .+.++ +|+
T Consensus 355 ~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl 434 (459)
T PRK06931 355 WLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPL 434 (459)
T ss_pred HHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCC
Confidence 99999999988899999999999999999964321 11000000122345678899999999998754 24455 489
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
++|++++++++++|++++++
T Consensus 435 ~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 435 LITQAECEEFIDRFEQALLA 454 (459)
T ss_pred CcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998875
No 21
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-57 Score=431.76 Aligned_cols=379 Identities=26% Similarity=0.382 Sum_probs=314.3
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCCC--C
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--I 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~~--~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++..+ .+..+...+++++|.+.++. .
T Consensus 38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 117 (443)
T PRK06058 38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHE 117 (443)
T ss_pred CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 478999999999999999999999999999999999999999999999985422 24577889999999999873 3
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCceeecCCCC-
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFND- 169 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d- 169 (411)
++++|++||+||++.|+++++.++++++||.+.++|||.+..++.+++... ....+ +...+.... ....++++
T Consensus 118 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 193 (443)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRA----PMSYPYRDP 193 (443)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEc----CCCcccccc
Confidence 799999999999999999999999999999999999999999888776421 11111 101111000 00011111
Q ss_pred --------------HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 170 --------------VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 170 --------------~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
.+.+++.+ .++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~--~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~ 271 (443)
T PRK06058 194 KGLATDGEEAAARAITVIEKQV--GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAW 271 (443)
T ss_pred cccccchHHHHHHHHHHHHHhh--CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhh
Confidence 11222222 24689999999999999999999999999999999999999999999999 99998
Q ss_pred ccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT 314 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~ 314 (411)
++.+++++.||+++++|++++|+|+|++++++++++.+.. ..+++|+++||++|+++.++++.++++++.+++++++
T Consensus 272 fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g 348 (443)
T PRK06058 272 FACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHP---GGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIE 348 (443)
T ss_pred hHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 8899999999999999999999999999999999888763 3467899999999999999999998899999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ec
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SL 390 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~ 390 (411)
++++++|+++..+++.+.++++.|+++.+++.+.... .++...+..+.+.+.++||++.+++ .+.+|+ |+
T Consensus 349 ~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~------~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl 422 (443)
T PRK06058 349 ALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTT------EPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPL 422 (443)
T ss_pred HHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCC------CCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCC
Confidence 9999999999888888899999999999999653211 1233456778889999999998754 245665 79
Q ss_pred CCCHHHHHHHHHHHHHHHHhC
Q 015230 391 AHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++|++++++++++|+++++++
T Consensus 423 ~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 423 VIGDELLREGLDVLEAALADL 443 (443)
T ss_pred ccCHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999875
No 22
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-57 Score=398.36 Aligned_cols=399 Identities=44% Similarity=0.680 Sum_probs=340.3
Q ss_pred CCCCccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHH
Q 015230 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLE 78 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~ 78 (411)
||.+.++..|........|+.+.+++|+.++|.+|++|+||.++||+.-+||++|++.+++.+++.++. ...+.+...
T Consensus 21 ~~~i~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~ea 100 (433)
T KOG1401|consen 21 MPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLEA 100 (433)
T ss_pred cccccccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHHH
Confidence 688888999999999999999999999999999999999999999999999999999999999999953 334445557
Q ss_pred HHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCc------EEEEEeCCcCCCchhhhhhcCCCCcccCCCC
Q 015230 79 NVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRE------RIIKFEGCYHGHADPFLVKAGSGVATLGLPD 150 (411)
Q Consensus 79 ~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~------~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (411)
..+++.+.+..+ ..++|+|+||||||++.||+++|++...+ ++|.+.++|||.+.+++...+...+..+..+
T Consensus 101 v~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p 180 (433)
T KOG1401|consen 101 VELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDP 180 (433)
T ss_pred HHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCC
Confidence 888888888885 78999999999999999999999875433 4999999999999999998877655544322
Q ss_pred CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-
Q 015230 151 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229 (411)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~- 229 (411)
....+...++||..++++.++.+.++++++|+||+++.||.+++++||+..|+++|+++|+++|.||+++||
T Consensus 181 -------~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~g 253 (433)
T KOG1401|consen 181 -------IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLG 253 (433)
T ss_pred -------CCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCcc
Confidence 234677889999999999999998899999999999999999999999999999999999999999999999
Q ss_pred ccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 230 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 230 ~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
|.|..++.+++++.||+.|++|.++||+|+|++.+++++.+.+.+..+.+|++||++||++|.++...++.+.+++.+++
T Consensus 254 R~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~ 333 (433)
T KOG1401|consen 254 RLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKN 333 (433)
T ss_pred ccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHH
Confidence 99999999999999999999999999999999999999999999888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEE-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee
Q 015230 310 LNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 388 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 388 (411)
+.+..+.+++.|.+...+.+..... .++|+++.+.+..+.- .+.+...........+.+.+.+.|+++.|- ..+
T Consensus 334 vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~-~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~----~~l 408 (433)
T KOG1401|consen 334 VSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVY-KFADAAREQGLLILTLGKGLLEEGVRIAPI----YLL 408 (433)
T ss_pred HHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechh-hhhhhhhhhhHHHHHHhcccccceEEEecc----ccc
Confidence 9999999999999998887766555 7889999988865422 111111122223334444445667777771 122
Q ss_pred ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
...+|+|.++++++++.+.++++
T Consensus 409 ~~~~~~E~i~~~l~i~~~~l~~~ 431 (433)
T KOG1401|consen 409 TVEHTPEVIQRLLTILEKVLSAL 431 (433)
T ss_pred cccCcHHHHHHHHHHHHHHHHHh
Confidence 44556899999999999998764
No 23
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-57 Score=429.06 Aligned_cols=391 Identities=23% Similarity=0.283 Sum_probs=318.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~-~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. . .+..+...+++++|.+..+ +.+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 91 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLE 91 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999999999999999999998532 2 2567888999999999887 678
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecC
Q 015230 94 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP 166 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (411)
+++|++||+||++.|+++++.+ +++.+||.+.++|||.+..++.+++.......+ +...+.........+..+
T Consensus 92 ~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 171 (443)
T PRK07483 92 HVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQ 171 (443)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcccccc
Confidence 9999999999999999999987 567889999999999999998887754322111 111111000000000000
Q ss_pred CC----------CHHHHHHHHHc-CCCcEEEEEEcccCC-CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc
Q 015230 167 FN----------DVSALENLFEN-NKGEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233 (411)
Q Consensus 167 ~~----------d~~~l~~~~~~-~~~~~~~vi~~~~~~-~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~ 233 (411)
.. .++++++.+.. .++++++|++||+++ ++|.+.++++|+++|+++|++||+++|+||+++|| |+|.
T Consensus 172 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~ 251 (443)
T PRK07483 172 RAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT 251 (443)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH
Confidence 00 12566665643 456899999999998 58999999999999999999999999999999999 9999
Q ss_pred CccccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhcCCC-CcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
+++.+++++.||+++++|+++||+ |+|.+++++++.+.+.... ...+++|+++||++++++.+.++.++++++.++++
T Consensus 252 ~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~ 331 (443)
T PRK07483 252 LFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVR 331 (443)
T ss_pred HHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999995 9999999999988876422 23578899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Cc
Q 015230 312 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FE 384 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~ 384 (411)
++++++++.|+++..+++.+.++++.|+++.+++.+...... ...+.......+.+.++++|+++.+.+ .+
T Consensus 332 ~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~ 409 (443)
T PRK07483 332 ARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKA--PFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccC--CCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCC
Confidence 999999999999888888889999999999999964321100 000112245678899999999998653 24
Q ss_pred ceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 385 AGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 385 ~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+++ |+++|++++|+++++|++++++
T Consensus 410 ~l~~~PpL~it~~eid~~~~~l~~~l~~ 437 (443)
T PRK07483 410 HVLLAPPFIITAAQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5554 7999999999999999999875
No 24
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.5e-57 Score=430.71 Aligned_cols=383 Identities=22% Similarity=0.294 Sum_probs=318.7
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++. ...+..+...+++++|.+..+ ..+
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 115 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLG 115 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 4889999999999999999999999999999999999999999999999853 224568888999999999887 458
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecC
Q 015230 94 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP 166 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (411)
+++|++||+||++.|+++++.+ +++.+||.+.++|||.+..++.+++.......+ +...+............+
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGAR 195 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccc
Confidence 9999999999999999999654 467899999999999999998888754333221 111111000000000111
Q ss_pred ---------CCCHHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc
Q 015230 167 ---------FNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 235 (411)
Q Consensus 167 ---------~~d~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~ 235 (411)
.++++++++.++++++++++|++|| +++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.++
T Consensus 196 ~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f 275 (453)
T PRK06943 196 PGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF 275 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh
Confidence 1246788888887778999999999 59999999999999999999999999999999999999 999999
Q ss_pred cccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC---CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 236 AQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 236 ~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
+.+++++.||+++++|+++|| +|+|.+++++++.+.+... ....+++|+++||++|+++.+.++.++++++.++.+
T Consensus 276 a~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~ 355 (453)
T PRK06943 276 ACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNA 355 (453)
T ss_pred HHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999 5999999999998887532 123578899999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--e
Q 015230 312 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 389 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~ 389 (411)
++++++++.|+++. +++.+.++++.|+++.+++..+.. +....+..+.+.+.++|+++.+.+ +.+++ |
T Consensus 356 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~~--------~~~~~~~~i~~~~~~~Gll~~~~g-~~l~~~Pp 425 (453)
T PRK06943 356 RKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDGD--------AARTFSRRFFEAALERELLLRPIG-TTVYLMPP 425 (453)
T ss_pred HHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCCC--------cchHHHHHHHHHHHHCCcEEEecC-CEEEEeCC
Confidence 99999999999984 467777999999999999963210 122335788899999999998865 34554 6
Q ss_pred cCCCHHHHHHHHHHHHHHHHh
Q 015230 390 LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 390 ~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+++|+++|++++++|++++++
T Consensus 426 l~it~~eid~~~~~l~~al~~ 446 (453)
T PRK06943 426 YVLDDDEIAWLAERTRATLDA 446 (453)
T ss_pred CcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876
No 25
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.1e-57 Score=431.08 Aligned_cols=387 Identities=20% Similarity=0.306 Sum_probs=320.3
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
++++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. ..+..+...++++.|.+..+ +.++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 5689999999999999999999999999999999999999999999998532 24678889999999999887 6789
Q ss_pred EEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec--
Q 015230 95 VRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA-- 165 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~-- 165 (411)
++|++||+||++.|+++++.+ +++.+||.+.++|||.+..++.+++.......+ +...+....+.......
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999876 467889999999999999988877654322211 11111110001111111
Q ss_pred -------CCCCHHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 166 -------PFNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 166 -------~~~d~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
..++++++++.++++++++++||+|| +++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+++
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a 269 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA 269 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchH
Confidence 12246778888887778999999999 79999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 237 QEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 237 ~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
.+++++.||+++++|+++|| +|+|.+++++++.+.+... ....+++|++++|++|+++.++++.++++++.++.+
T Consensus 270 ~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~ 349 (466)
T PRK07030 270 CEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNR 349 (466)
T ss_pred HHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999 5999999999998877421 234688899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCC--CcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee-
Q 015230 312 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 388 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~- 388 (411)
++++++++.|+++. +++.+.++++.|+++.+++.+.... ++. ........+.+.+.++|+++.+.+ +.+++
T Consensus 350 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~----~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~ 423 (466)
T PRK07030 350 ALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYP----WQERRGLKVYQHALERGALLRPLG-SVVYFL 423 (466)
T ss_pred HHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCc----chhHHHHHHHHHHHHCCeEEEecC-CEEEEE
Confidence 99999999999984 6788889999999999999643221 110 112234678899999999998864 35544
Q ss_pred -ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 -SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
|+++|+++|++++++|+++++++
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 424 PPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999998763
No 26
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-57 Score=430.78 Aligned_cols=389 Identities=25% Similarity=0.345 Sum_probs=315.2
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHHHHHHHhhCCC-C
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS-I 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l~~~l~~~~~~-~ 92 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++... ..+.++...++++.+.+..+. .
T Consensus 44 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~ 123 (464)
T PRK06938 44 RIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAF 123 (464)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCcccc
Confidence 358999999999999999999999999999999999999999999999976321 245678889999999998863 2
Q ss_pred ---CEEEEe-CChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecCC
Q 015230 93 ---EMVRFV-NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 93 ---~~v~~~-~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 167 (411)
++++|+ +||+||++.||++++.++++.+||.+.++|||++..++.+++.......+ +...++...........++
T Consensus 124 ~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 203 (464)
T PRK06938 124 AREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPF 203 (464)
T ss_pred cccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccc
Confidence 367665 79999999999999999999999999999999999998887653222111 1111110000000000111
Q ss_pred ---------CCHHHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 168 ---------NDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 168 ---------~d~~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
.+.+.+++.+++. .+++++||+||+++++|.+.++++|+++++++|++||+++|+|||++|| |+|.+
T Consensus 204 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~ 283 (464)
T PRK06938 204 GLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKM 283 (464)
T ss_pred cCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHH
Confidence 1256778888643 2479999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT 314 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~ 314 (411)
++++++++.||+++++|+++||+|+|.+++++++ +.+. ...+++||++||++|+++.+.++.++++++.++.++++
T Consensus 284 ~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~---~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G 359 (464)
T PRK06938 284 FAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQ---PGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMG 359 (464)
T ss_pred HHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccC---CCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999988774 5553 34578899999999999999999998889999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC-CCcchhccc-chHHHHHHHHHHHHcCeEeccCC--Ccceee--
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKS-ETTKFARFYRGMLEEGVYFAPSQ--FEAGFT-- 388 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~-- 388 (411)
+++++.|+++..+++.+.++++.|+++.+++.+... .+.. ...+ +...+..+.+.+.++|+++.+.+ .+.+++
T Consensus 360 ~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~P 438 (464)
T PRK06938 360 ERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDAL-GHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLP 438 (464)
T ss_pred HHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCccccccc-ccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEEC
Confidence 999999999988889999999999999999964321 1110 1111 22345778899999999998754 244544
Q ss_pred ecCCCHHHHHHHHHHHHHHHHh
Q 015230 389 SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
|+.+|++|++++++++++++.+
T Consensus 439 pl~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 439 PLIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred CCccCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999875
No 27
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-57 Score=424.51 Aligned_cols=377 Identities=28% Similarity=0.387 Sum_probs=318.1
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCCC--CC
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--IE 93 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~~--~~ 93 (411)
|+.+.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... .++.+...++++++.+..++ .+
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAK 102 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 88999999999999999999999999999999999999999999999985432 35677889999999999874 37
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCCCCCCCCCCCCCCceeecCCCC---
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFND--- 169 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d--- 169 (411)
+++|++||+||++.|+++++.++++.+|+.+.++|||.+..++.+++.. .....+... ...+..+++++
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 175 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM-------MPDVYHVPFPVELH 175 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCC-------CCCeEEecCCcccc
Confidence 9999999999999999999999999999999999999998877766642 222111100 01233333332
Q ss_pred -------HHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccc
Q 015230 170 -------VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 239 (411)
Q Consensus 170 -------~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~ 239 (411)
++++++.+++ .++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|.+++.++
T Consensus 176 g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~ 255 (425)
T PRK07495 176 GVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEH 255 (425)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecc
Confidence 5566777753 34689999999999999989999999999999999999999999999999 9998888888
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.||++++||++++|+|+|++++++++++.+.. ..+++|++++|++++++.++++.++++++.++++++++++++
T Consensus 256 ~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 332 (425)
T PRK07495 256 HEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGP---GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332 (425)
T ss_pred cCCCCCEEeehhhhcCCccceEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888763 346779999999999999999999888999999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSD 395 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~ 395 (411)
+|+++..+++.+.++++.|+++++++.+.+. ..++...+..+.+.++++|+++.+.+ .+.+++ |+++|++
T Consensus 333 ~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~------~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~ 406 (425)
T PRK07495 333 RLASLRETVPEIADIRGPGFMNAVEFNDADS------GLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDD 406 (425)
T ss_pred HHHHHHhhCCCeeeeecCceEEEEEEecCCC------CCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHH
Confidence 9999988888888999999999999965321 11333446788999999999997643 245554 7999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 015230 396 DIQHTITAAEKVLRQI 411 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~~ 411 (411)
++|+++++|+++++++
T Consensus 407 ~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 407 VFAEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 28
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.1e-56 Score=427.66 Aligned_cols=390 Identities=24% Similarity=0.329 Sum_probs=319.6
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. ...+.++...++++.|.+..+ +.+
T Consensus 38 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 117 (460)
T PRK06916 38 DPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLK 117 (460)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 5899999999999999999999999999999999999999999999999843 234567888999999999987 468
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecC
Q 015230 94 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP 166 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 166 (411)
+++|++||+||++.|+++++.+ +++.+||.+.++|||.+..++.+++.......+ +...+....+....+..+
T Consensus 118 ~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~ 197 (460)
T PRK06916 118 KVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSP 197 (460)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccc
Confidence 9999999999999999999874 567899999999999999988877754322211 111111000001111111
Q ss_pred C---------CCHHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc
Q 015230 167 F---------NDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 235 (411)
Q Consensus 167 ~---------~d~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~ 235 (411)
. .+++.+++.++++++++++|++|| +++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.++
T Consensus 198 ~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~ 277 (460)
T PRK06916 198 YGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF 277 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh
Confidence 1 146777888877778999999999 69999999999999999999999999999999999999 999999
Q ss_pred cccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcC----CCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 236 AQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP----AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 236 ~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~----~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
+.+++++.||+++++|+++|| +|+|.+++++++++.+.. .....+++|++++|++++++.++++.++++++.+++
T Consensus 278 a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~ 357 (460)
T PRK06916 278 ACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQV 357 (460)
T ss_pred HHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHH
Confidence 999999999999999999999 599999999999887742 123457789999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCccee--e
Q 015230 311 NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--T 388 (411)
Q Consensus 311 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~ 388 (411)
+++++++++.|+++.. ++.+.++++.|+++.+++.++... ..........+..+.+.++++|+++.+.+ +.++ +
T Consensus 358 ~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~--~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~l~~~P 433 (460)
T PRK06916 358 ARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKET--KEPFEWTERVGVQVCKRSRELGMLTRPLG-NTIVFMP 433 (460)
T ss_pred HHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeeccccc--ccCCCchhhHHHHHHHHHHHCCeEEEecC-CEEEEeC
Confidence 9999999999999854 788889999999999999643210 00000112234678899999999998865 3444 3
Q ss_pred ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
|+++|+++|++++++|+++++++
T Consensus 434 pl~it~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06916 434 PLASTIDELDEMLRILYKAISDV 456 (460)
T ss_pred CcccCHHHHHHHHHHHHHHHHhh
Confidence 79999999999999999998764
No 29
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-56 Score=425.17 Aligned_cols=386 Identities=24% Similarity=0.352 Sum_probs=318.4
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCCCC--
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPSI-- 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~~~-- 92 (411)
.|+++.+++|+++||.|||+|+||.+++++.++||+||++.+|+.++++++... .+..+...++++.|.+..++.
T Consensus 24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 103 (445)
T PRK08593 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFE 103 (445)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 488999999999999999999999999999999999999999999999986433 246788899999999998743
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCc-ccCC-CCCCCCCCCCCCceeec--CCC
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA-TLGL-PDSPGVPKGATYETLTA--PFN 168 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~-~~~~-~~~~~~~~~~~~~~~~~--~~~ 168 (411)
++|+|++||+||++.||++++.++++.+||.+.++|||.+..++.+++.... .... +...++......+.... ..+
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 7999999999999999999999999999999999999999998887764221 1111 11112110000011111 111
Q ss_pred C-------HHHHHHHHHcC--CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccc
Q 015230 169 D-------VSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 238 (411)
Q Consensus 169 d-------~~~l~~~~~~~--~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~ 238 (411)
+ ++++++.+++. ++++++||+||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~ 263 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSIS 263 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHH
Confidence 1 24455555432 4689999999999999999999999999999999999999999999999 999888888
Q ss_pred ccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015230 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 318 (411)
Q Consensus 239 ~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (411)
++++.||++++||++++|+|+|++++++++++.+.. ..+..|+.++|++++++.++++.++++++.+++++++++++
T Consensus 264 ~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~ 340 (445)
T PRK08593 264 HFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEA---PAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYAR 340 (445)
T ss_pred hcCCCCCEeeecccccCCcccEEEEEcHHHHhhhcc---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 899999999999999999999999999999988853 23556999999999999999999988899999999999999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHH
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 396 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~ 396 (411)
+.|+++..+++.+.++++.|+++.+++...... ..++...+..+...|+++||++.+.+.+.+|+ ++.+|++|
T Consensus 341 ~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~-----~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~ 415 (445)
T PRK08593 341 KRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKL-----KTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQ 415 (445)
T ss_pred HHHHHHHhcCCcEEEEeccceEEEEEEecCCCc-----CCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHH
Confidence 999999888899999999999999998643211 11334456789999999999998765566664 79999999
Q ss_pred HHHHHHHHHHHHHhC
Q 015230 397 IQHTITAAEKVLRQI 411 (411)
Q Consensus 397 i~~~i~~l~~~~~~~ 411 (411)
+++++++++++++++
T Consensus 416 id~~~~~l~~~l~~~ 430 (445)
T PRK08593 416 LDTALNTIEQAFTAL 430 (445)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988753
No 30
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.6e-56 Score=425.78 Aligned_cols=388 Identities=24% Similarity=0.319 Sum_probs=316.2
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCCC----
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVPS---- 91 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~~---- 91 (411)
|+.+.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. ...+..+...++++++.+..+.
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 126 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGR 126 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccC
Confidence 477999999999999999999999999999999999999999999998743 2246678889999999998863
Q ss_pred --CCEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCce
Q 015230 92 --IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYET 162 (411)
Q Consensus 92 --~~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 162 (411)
.++++|++||+||++.||++++.+ +++.+||.+.++|||.+..++..++.......+ +...++...+..+.
T Consensus 127 ~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~ 206 (472)
T PRK08742 127 APLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDA 206 (472)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCc
Confidence 579999999999999999999987 457899999999999999998887654322111 11111110000111
Q ss_pred eecCC---------CCHHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc
Q 015230 163 LTAPF---------NDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231 (411)
Q Consensus 163 ~~~~~---------~d~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~ 231 (411)
...+. .+++.+++.+++.++++++||+|| +++++|.+.++++|+++++++|++||+++|+||+++|| |+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt 286 (472)
T PRK08742 207 YLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT 286 (472)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 11111 135677788876667899999999 69999999999999999999999999999999999999 99
Q ss_pred ccCccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC---CCcccccCCCCCHHHHHHHHHHHHHHhcCChH
Q 015230 232 AYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 307 (411)
Q Consensus 232 g~~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~ 307 (411)
|.+++.+++++.||+++++|+++|| +|+|.+++++++.+.+... ....+++|++++|++|+++.++++.++++++.
T Consensus 287 G~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~ 366 (472)
T PRK08742 287 GTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVI 366 (472)
T ss_pred ccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHH
Confidence 9999999999999999999999999 5999999999998877531 23457889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCccee
Q 015230 308 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 387 (411)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 387 (411)
++.++.++++++.++.+ .+++.+.++++.|+++.+++..+.... ....+....+..+.+.++++|+++.+.+ +.++
T Consensus 367 ~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~ 442 (472)
T PRK08742 367 ARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKR--TPFPPAARVGLHAYRAALARGVVLRPLG-DVLY 442 (472)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCcccc--ccCCchhHHHHHHHHHHHHCCeEEEecC-CEEE
Confidence 99999999999877765 557888999999999999996432110 0000111234678889999999998865 5665
Q ss_pred e--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 388 T--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 388 ~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+ |+++|++++++++++|++++++
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~ 467 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Confidence 5 7999999999999999999876
No 31
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.2e-56 Score=419.64 Aligned_cols=372 Identities=26% Similarity=0.364 Sum_probs=320.4
Q ss_pred CCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC--CCCHHHHHHHHHHHhhCCCCC
Q 015230 16 GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIE 93 (411)
Q Consensus 16 ~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~--~~~~~~~~l~~~l~~~~~~~~ 93 (411)
...|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++..... +.++...+++++|.+..+..+
T Consensus 20 ~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~ 99 (408)
T PRK04612 20 RPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAE 99 (408)
T ss_pred CCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCC
Confidence 345889999999999999999999999999999999999999999999999854332 457778899999999887668
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc-------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 94 MVRFVNSGTEACMGVLRLARAFT-------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~-------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
+++|++||+||++.||++++.++ ++.+||.+.++|||.+..++..++.+.....+. .. ...+..++
T Consensus 100 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~---~~----~~~~~~~~ 172 (408)
T PRK04612 100 KVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYE---PL----PGGFRYVD 172 (408)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCC---CC----CCCceEcC
Confidence 99999999999999999999873 356799999999999999888776533221111 01 12345678
Q ss_pred CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc
Q 015230 167 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 167 ~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d 245 (411)
++|++.+++.++ ++++++|++||+++++|++.++++|+++|+++|++||+++|+||+|+|| ++|.+++....++.||
T Consensus 173 ~~d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pd 250 (408)
T PRK04612 173 FNDVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD 250 (408)
T ss_pred CCCHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCC
Confidence 889999999886 4689999999999999999999999999999999999999999999999 9888777667788999
Q ss_pred hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 246 ~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
++||||++++|+|+|++++++++++.+.. ..+++|++++|++++++.++++.++++++.+++++++++++++|+++.
T Consensus 251 i~t~~K~l~~G~piga~~~~~~~~~~~~~---~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~ 327 (408)
T PRK04612 251 IVTLAKALGGGFPIGAMLAGPKVAETMQF---GAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALN 327 (408)
T ss_pred EEEEcchhcCCCceEEEEECHHHHhhhcC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999989888887763 346678999999999999999999889999999999999999999998
Q ss_pred HhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHH
Q 015230 326 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITA 403 (411)
Q Consensus 326 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~ 403 (411)
.+++.+.++++.|+++.+++... ....+..+.+.+.++|+++.+.+.+.+|+ ++.+|++++++++++
T Consensus 328 ~~~~~i~~vrg~Gl~~~i~~~~~-----------~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~ 396 (408)
T PRK04612 328 AEFGVFAQVRGRGLMLGAVLAPA-----------HAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLAR 396 (408)
T ss_pred hhCCCeeeeeccceEEEEEecCc-----------hhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHH
Confidence 88898999999999999998531 12334678899999999998876667776 689999999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|++++.+
T Consensus 397 l~~~l~~ 403 (408)
T PRK04612 397 LRLALAD 403 (408)
T ss_pred HHHHHHH
Confidence 9998875
No 32
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=8.6e-57 Score=427.70 Aligned_cols=389 Identities=24% Similarity=0.353 Sum_probs=312.5
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHHHHHHHhhCCCC--
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSI-- 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l~~~l~~~~~~~-- 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. ..+.++...++++.|.+..++.
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 58899999999999999999999999999999999999999999999998532 1256788899999999998732
Q ss_pred -CE-EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecCCC-
Q 015230 93 -EM-VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN- 168 (411)
Q Consensus 93 -~~-v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 168 (411)
.. +++++||+||++.||++++.++++.+||++.++|||.+..++.+++........ +...+............+++
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 34 566799999999999999999999999999999999999998887642221111 11111111111122223222
Q ss_pred ----CH----HHHHHHHH---cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 169 ----DV----SALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 169 ----d~----~~l~~~~~---~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
+. +.+++.++ ...+++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a 260 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFA 260 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhH
Confidence 11 22344443 233679999999999999999999999999999999999999999999999 9999999
Q ss_pred ccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015230 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316 (411)
Q Consensus 237 ~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 316 (411)
.+++++.||++++||++++|+|+|+++++++ ++.+. ...+++|++++|++|+++.++++.++++++.+++++++++
T Consensus 261 ~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~---~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~ 336 (442)
T TIGR00709 261 FEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQ---PAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGER 336 (442)
T ss_pred HHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccC---CCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999887 45553 2346789999999999999999999889999999999999
Q ss_pred HHHHHHHHHHhcCCceEEeeecceEEEEEecCC-CCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Cccee--eecC
Q 015230 317 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF--TSLA 391 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~--~~~~ 391 (411)
+++.|+++..+++.+.++++.|+++.+++.+.. ..+......++...+..+...++++|+++.+.+ .+.++ +|++
T Consensus 337 l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~ 416 (442)
T TIGR00709 337 ITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPIT 416 (442)
T ss_pred HHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCC
Confidence 999999998888999999999999999996532 111100011122345778899999999998754 34444 5899
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 015230 392 HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~~ 410 (411)
+|+++++++++++++++.+
T Consensus 417 it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 417 IDQEECEEGISRFKQAVEE 435 (442)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998865
No 33
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-56 Score=425.07 Aligned_cols=404 Identities=21% Similarity=0.285 Sum_probs=323.7
Q ss_pred ccCcccccccCCC-CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHH
Q 015230 5 VNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENV 80 (411)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~ 80 (411)
+|+++........ .|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.+++++.. .+.+..+...+
T Consensus 20 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~ 99 (460)
T PRK06541 20 LWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWSYAHPPAIE 99 (460)
T ss_pred cccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHH
Confidence 4555555543322 3788999999999999999999999999999999999999999999999853 23467888899
Q ss_pred HHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc---c---CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCC
Q 015230 81 LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---T---GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSP 152 (411)
Q Consensus 81 l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~---~---~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 152 (411)
+++++.+..+ +.++++|++||+||++.|+++++.+ + ++.+||.+.++|||.+..++..++.......+ +...
T Consensus 100 la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 179 (460)
T PRK06541 100 LAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVP 179 (460)
T ss_pred HHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCC
Confidence 9999999887 4789999999999999999999887 2 47899999999999999998887654322111 2222
Q ss_pred CCCCCCCCceeecC-C-CC--------HHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 153 GVPKGATYETLTAP-F-ND--------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 153 ~~~~~~~~~~~~~~-~-~d--------~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
++...+....+..+ + ++ ++.+++.+++ .++++++|++||+++++|.+.++++|+++|+++|++||+++|
T Consensus 180 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI 259 (460)
T PRK06541 180 GGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLV 259 (460)
T ss_pred CcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 22211111222222 2 12 3677877764 346899999999999999999999999999999999999999
Q ss_pred Eecccccc-ccccCccccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhcCC-CCcccccCCCCCHHHHHHHHHHH
Q 015230 222 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTL 298 (411)
Q Consensus 222 ~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~a~~~~~l 298 (411)
+||+|+|| |+|..++.+++++.||++++||++++|+ |+|++++++++++.+... ....+++|+.++|++++++.+.+
T Consensus 260 ~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l 339 (460)
T PRK06541 260 SDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANL 339 (460)
T ss_pred EechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHH
Confidence 99999999 9999989989999999999999999996 999999999998887643 23456779999999999999999
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC--CCcchhcccchHHHHHHHHHHHHcCe
Q 015230 299 KRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV--YNFEDAKKSETTKFARFYRGMLEEGV 376 (411)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~Gi 376 (411)
+.+++++++++++++++++++.|+++.. ++.+.++++.|+++.+++.+... .++... .........+.+.|+++||
T Consensus 340 ~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Gi 417 (460)
T PRK06541 340 DIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDD-ESERLLRGFLSPALFEAGL 417 (460)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcch-hhhhhHHHHHHHHHHhCCe
Confidence 9998889999999999999999999865 77888899999999999964321 111000 0011122467889999999
Q ss_pred EeccC--CCcceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 377 YFAPS--QFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 377 ~v~~~--~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
++.+. +.+.+|+ ++.+|+++|++++++|++++++
T Consensus 418 ~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 418 YCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 99874 3345555 6889999999999999999875
No 34
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=2.6e-56 Score=425.07 Aligned_cols=387 Identities=21% Similarity=0.245 Sum_probs=315.8
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---C-CCCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---F-GAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~-~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++.. . .+..+...+++++|.+..+ +.
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 109 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM 109 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC
Confidence 48899999999999999999999999999999999999999999999998532 2 2467888999999999997 57
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
++++|++||+||+++|||+++.+ +++.+||.+.++|||.+..+..+++.......+ +...++..........+
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 89999999999999999998765 357899999999999998887766643222111 11111111000011111
Q ss_pred C--C--------CCHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc
Q 015230 166 P--F--------NDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233 (411)
Q Consensus 166 ~--~--------~d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~ 233 (411)
+ . .+.+++++.+.+ .++++++||+||+++++|++.++++|+++|+++|++||+++|+||+++|| |+|.
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 0 0 024667777753 34689999999999999999999999999999999999999999999999 9999
Q ss_pred CccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
+++.+++++.||++++||+++|| +|+|++++++++++.+... ....+++|+++||++++++.++++.++++++.+
T Consensus 270 ~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 349 (460)
T PRK06105 270 MFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVG 349 (460)
T ss_pred hhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999988 6999999999998877532 123477899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCC--CcchhcccchHHHHHHHHHHHHcCeEeccCCCcce
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 386 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 386 (411)
+++++++++++.|+++ .+++.+.++++.|++..+++...... ++ .+....+..+.+.++++|+++.+.+ +.+
T Consensus 350 ~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~----~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i 423 (460)
T PRK06105 350 NAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATKTPF----EPPGKVGARANAAAHEHGVISRAMG-DTL 423 (460)
T ss_pred HHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccCCCC----CchhHHHHHHHHHHHHCCeEEEecC-CEE
Confidence 9999999999999998 77898999999999999999643211 10 0112335678899999999998864 455
Q ss_pred ee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 387 FT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 387 ~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
++ |+++|++++++++++|.+++++
T Consensus 424 ~l~Ppl~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 424 AFCPPLIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHH
Confidence 54 6889999999999999999875
No 35
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=1.2e-56 Score=422.53 Aligned_cols=377 Identities=23% Similarity=0.310 Sum_probs=316.0
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
|+++.+++|+++||.||++|+||.+++|+.++||+||++.+|+.+++++.... .+..+...+++++|.+..| +.++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 57899999999999999999999999999999999999999999999985322 2467888999999999987 5789
Q ss_pred EEEeCChHHHHHHHHHHHHhc-----cCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCce---ee
Q 015230 95 VRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYET---LT 164 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~-----~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~---~~ 164 (411)
++|++||+||++.|+++++.+ +++.+||.+.++|||.+..++.+++... ....+ +...+......... ..
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGE 185 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchh
Confidence 999999999999999999987 5678999999999999988887765321 11111 11111100000000 01
Q ss_pred cCCCCHHHHHHHHHcCCCcEEEEEEccc-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCC
Q 015230 165 APFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 242 (411)
Q Consensus 165 ~~~~d~~~l~~~~~~~~~~~~~vi~~~~-~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~ 242 (411)
+.++|++++++.+++.++++++|++||+ ++.+|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++.+++++
T Consensus 186 ~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv 265 (428)
T PRK07986 186 WDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI 265 (428)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC
Confidence 2356888999999876678999999996 8889999999999999999999999999999999999 9999999999999
Q ss_pred CcchhhhhhhccCC-cccccccccHHHHHHhcCCC--CcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 243 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 243 ~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~--~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
.||++++||+++|| +|+|.+++++++++.+.... ...+++|++++|++++++.++++.+++++++++++++.+++++
T Consensus 266 ~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 266 APDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLRE 345 (428)
T ss_pred CCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999 69999999999999886422 2347789999999999999999999888999999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 397 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i 397 (411)
.|+++.. ++.+.++++.|+++.+++..+ ..+..+.+.|+++|+++.+.+ +.+++ |+++|++++
T Consensus 346 ~l~~l~~-~~~i~~vRg~Gl~~~ve~~~~-------------~~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei 410 (428)
T PRK07986 346 ELAPLRD-APMVADVRVLGAIGVVETTRP-------------VNMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQL 410 (428)
T ss_pred HHHHHhc-CCCEEeEeccceEEEEEeCCc-------------ccHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHH
Confidence 9999854 677889999999999998532 113578899999999998865 45655 799999999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|.+++++
T Consensus 411 ~~~~~~l~~~l~~ 423 (428)
T PRK07986 411 QRLTAAVNRAVQD 423 (428)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998864
No 36
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.6e-56 Score=422.42 Aligned_cols=387 Identities=23% Similarity=0.291 Sum_probs=313.3
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. +++..+...+++++|.+..+ +.
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 111 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF 111 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc
Confidence 47899999999999999999999999999999999999999999999998532 24578889999999999997 57
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
++++|++||+||++.||++++.+ +++.+||.+.++|||.+..++.+++........ +...++........+..
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGE 191 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccc
Confidence 89999999999999999999887 457789999999999998887776653222111 11111111000001110
Q ss_pred -------CCCC--HHHHHHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 166 -------PFND--VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 166 -------~~~d--~~~l~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
++++ .+.+++.+. ..++++++||+||+++++|++.++++|+++|+++|++||+++|+||+++|| |+|.+
T Consensus 192 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 192 GGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 1112 356655443 345789999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhc-CCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH-H
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVA-PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL-N 311 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~-~ 311 (411)
++.+++++.||+++++|+++||+ |+|.+++++++++.+. ......+++|++++|++|+++.++|+.++++++.+++ +
T Consensus 272 ~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~ 351 (456)
T PRK07480 272 FGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRD 351 (456)
T ss_pred hhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999994 9999999999988873 2223457889999999999999999999988999999 6
Q ss_pred HHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC--CCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee-
Q 015230 312 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV--YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 388 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~- 388 (411)
++++++++.|+++ .+++.+.++++.|+++.+++.++.. .++. ........+.+.++++|+++.+.+ +.+++
T Consensus 352 ~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Gll~~~~~-~~l~~~ 425 (456)
T PRK07480 352 DTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATRERFE----AGGGVGTICRDHCFANGLIMRAVG-DRMIIS 425 (456)
T ss_pred HHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEeccccccccCc----chhhHHHHHHHHHHHCCcEEeecC-CEEEEE
Confidence 9999999999996 5678888999999999999964321 1100 111223577888999999998754 45444
Q ss_pred -ecCCCHHHHHHHHHHHHHHHHh
Q 015230 389 -SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
++.+|+++||+++++|++++++
T Consensus 426 Ppl~it~~eid~~~~~l~~al~~ 448 (456)
T PRK07480 426 PPLVITHAEIDELVEKARKALDA 448 (456)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 7888999999999999998875
No 37
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-56 Score=423.79 Aligned_cols=389 Identities=21% Similarity=0.292 Sum_probs=314.1
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCC-CCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFG-APCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~-~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.+++++.. .+. ..++...+++++|.+..+ +.
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 4889999999999999999999999999999999999999999999999842 222 567888999999999987 47
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 165 (411)
++++|++||+||++.|+++++.+ +++.+||.+.++|||.+..+....+.......+ +...++...........
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 89999999999999999999877 347899999999999998887776653222111 11111100000011111
Q ss_pred CCC---------CHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 166 PFN---------DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 166 ~~~---------d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
+.+ ..+.+++.+.. .++++++||+||+++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF 272 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh
Confidence 111 13455666653 45789999999999999999999999999999999999999999999999 99988
Q ss_pred cccc-ccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC----CCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 235 GAQE-YFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 235 ~~~~-~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
++.+ ++++.||+++++|+++|| +|+|.+++++++++.+... ....+++|++++|++|+++.+.++.++++++.+
T Consensus 273 ~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~ 352 (466)
T PRK07036 273 FASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCE 352 (466)
T ss_pred hhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 8887 789999999999999999 5999999999998887532 123577899999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCccee-
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF- 387 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~- 387 (411)
+++++++++++.|+++ .+++.+.++++.|+++.+++.++.... .....+...+..+.+.++++|+++.+.+ +.++
T Consensus 353 ~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l 428 (466)
T PRK07036 353 HVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSK--ALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVL 428 (466)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCcccc--CCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEE
Confidence 9999999999999987 567888999999999999996532210 0001122345678899999999998765 3444
Q ss_pred -eecCCCHHHHHHHHHHHHHHHHh
Q 015230 388 -TSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 388 -~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+|+++|+++||+++++|++++++
T Consensus 429 ~Ppl~it~~~id~~~~~l~~al~~ 452 (466)
T PRK07036 429 SPPLIITRAQIDEIVAILRAAIEE 452 (466)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHH
Confidence 46899999999999999988865
No 38
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-56 Score=421.76 Aligned_cols=382 Identities=23% Similarity=0.299 Sum_probs=312.9
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--C-CCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--G-APCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~-~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++... . +.++...++++.|.+..+ +.+
T Consensus 35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 114 (457)
T PRK05639 35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISPIENP 114 (457)
T ss_pred CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCCCCcC
Confidence 489999999999999999999999999999999999999999999999985322 2 335777899999999987 458
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCceeecC-----
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAP----- 166 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~----- 166 (411)
+++|++||+||++.|+++++.++++.+||.+.++|||.+..++.+.+... ....+ +...++...+..+....+
T Consensus 115 ~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 194 (457)
T PRK05639 115 KVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGING 194 (457)
T ss_pred EEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccc
Confidence 99999999999999999999999999999999999999999887766421 11111 111111000000000000
Q ss_pred CCCH--------HHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 167 FNDV--------SALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 167 ~~d~--------~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
+.+. +.+++.+.. .++++++||+||+++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+
T Consensus 195 ~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 274 (457)
T PRK05639 195 YEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKW 274 (457)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchH
Confidence 1122 234444422 25789999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT 314 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~ 314 (411)
++.+++++.||++++||+++||+|+|++++++++++. .. ..+.+|+.++|++++++.++++.++++++.++.++++
T Consensus 275 ~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~-~~---~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g 350 (457)
T PRK05639 275 FASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDL-TS---GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVG 350 (457)
T ss_pred HHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhh-cC---CCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 8999999999999999999999999999999999883 21 1245699999999999999999999899999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ec
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SL 390 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~ 390 (411)
+++++.|+++..+++.+.++++.|+++.+++..+.. .++...+..+.+.++++|+++.+.+ .+.+|+ |+
T Consensus 351 ~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~-------~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl 423 (457)
T PRK05639 351 EFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG-------KPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPL 423 (457)
T ss_pred HHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC-------CCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCC
Confidence 999999999988889999999999999999964321 1233455788999999999998764 345655 79
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+|++++|+++++|++++++
T Consensus 424 ~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 424 VITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred ccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999998865
No 39
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-56 Score=420.81 Aligned_cols=390 Identities=23% Similarity=0.288 Sum_probs=317.8
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.| ++.+++|+++||.||++|+||.+++++.++||+||+|.+++.++++++... .+..+...++++.|.+..+ ..+
T Consensus 14 ~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 92 (447)
T PRK06917 14 YP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLN 92 (447)
T ss_pred CC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 35 589999999999999999999999999999999999999999999985322 2567888999999999987 458
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeec-
Q 015230 94 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA- 165 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~- 165 (411)
+++|++||+||++.|+++++.+ +++.+|+.+.++|||++..++.+++.......+ +...++...........
T Consensus 93 ~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (447)
T PRK06917 93 WSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCP 172 (447)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccc
Confidence 9999999999999999999765 567899999999999999998877653222111 11111110000011111
Q ss_pred --------CCCCHHHHHHHHHcCC-CcEEEEEEcccCCC-CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 166 --------PFNDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 166 --------~~~d~~~l~~~~~~~~-~~~~~vi~~~~~~~-~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
..++.+.+++.++++. +++++|++||++++ +|++.++++|+++|+++|++||+++|+||+++|| |+|.+
T Consensus 173 ~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~ 252 (447)
T PRK06917 173 VQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAM 252 (447)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccch
Confidence 1224577788887643 57999999999985 7799999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhcCCC-CcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
++.+++++.||++++||++++|+ |+|++++++++++.+.... ...+++|++++|++++++.++++.++++++.+++++
T Consensus 253 ~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~ 332 (447)
T PRK06917 253 FAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAE 332 (447)
T ss_pred hhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 99999999999999999999995 9999999999988876432 345678999999999999999999988899999999
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Ccc
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEA 385 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~ 385 (411)
+++++++.|+++..+++.+.++++.|+++.+++..+.... ....++......+.+.++++||++.+.+ .+.
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~ 410 (447)
T PRK06917 333 KGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTK--QPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDA 410 (447)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcC--CCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCE
Confidence 9999999999998888999999999999999996432210 0000122346788899999999998752 234
Q ss_pred eee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 386 GFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 386 ~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+++ |+++|+++|++++++|++++++
T Consensus 411 i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 411 VIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 554 7899999999999999999875
No 40
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=7.1e-56 Score=422.11 Aligned_cols=391 Identities=23% Similarity=0.264 Sum_probs=312.0
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++.. +++..+...+++++|.+..+ ..
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 115 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY 115 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc
Confidence 47899999999999999999999999999999999999999999999998532 23457888999999999997 46
Q ss_pred CEEEEeCChHHHHHHHHHHHHhcc---C---CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeec-
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFT---G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTA- 165 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~---~---~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~- 165 (411)
++++|++||+||++.||++++.+. + +..|+.+..+|||++..++.+++........+...++...+....+..
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 899999999999999999998772 2 356788999999999888887765422211111111110000001110
Q ss_pred ------CCC--CHHHHHHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc
Q 015230 166 ------PFN--DVSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 235 (411)
Q Consensus 166 ------~~~--d~~~l~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~ 235 (411)
+++ +.+++++.+. ..++++++|++||+++++|.+.++++|+++|+++|++||+++|+|||++|| |+|.++
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 011 1355665554 344689999999999999999999999999999999999999999999999 999999
Q ss_pred cccccCCCcchhhhhhhccCCc-ccccccccHHHHHHhcCC-CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH-H
Q 015230 236 AQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-K 312 (411)
Q Consensus 236 ~~~~~~~~~d~~~~sK~~~~G~-~~g~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~-~ 312 (411)
+.+++++.||+++++|+++||+ |+|.+++++++.+.+... ....+++|++++|++|+++.++|+.++++++.++++ +
T Consensus 276 a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~ 355 (460)
T PRK12403 276 AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDD 355 (460)
T ss_pred hhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999999999995 999999999998887532 233477899999999999999999998888999996 9
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCccee--eec
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSL 390 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~~ 390 (411)
+.+++++.|+++..+++.+.++++.|+++.+++......... ..........+.+.+.++|+++.+.+ +.++ +|+
T Consensus 356 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl 432 (460)
T PRK12403 356 TGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKR--FANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPAL 432 (460)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCcccccc--ccchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCC
Confidence 999999999999888899999999999999999643211100 00011224456778899999998654 2344 478
Q ss_pred CCCHHHHHHHHHHHHHHHHhC
Q 015230 391 AHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++|++++++++++|+++++++
T Consensus 433 ~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 433 VAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998753
No 41
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=8.1e-56 Score=417.64 Aligned_cols=370 Identities=29% Similarity=0.402 Sum_probs=319.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.++++++++||+||++.+++.++++++. ...+..+...++++.|++.. +.++
T Consensus 16 ~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~-~~~~ 94 (397)
T TIGR03246 16 PAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT-FADK 94 (397)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhC-CCCE
Confidence 45889999999999999999999999999999999999999999999999843 23456778899999999987 4579
Q ss_pred EEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
++|++||++|++.||++++.++ ++.+||.++.+|||++..++..++.......+ .. ....+..++++
T Consensus 95 ~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~ 167 (397)
T TIGR03246 95 VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGF------AP-LPGGIKHAPYN 167 (397)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCC------CC-CCCceEEeCCC
Confidence 9999999999999999998774 67899999999999998877776653222111 00 12346678999
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~ 247 (411)
|++++++.++ +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++.+++++.||++
T Consensus 168 d~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~ 244 (397)
T TIGR03246 168 DLAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL 244 (397)
T ss_pred CHHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEE
Confidence 9999999886 469999999999999999999999999999999999999999999999 999888888899999999
Q ss_pred hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 248 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 248 ~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
++||++++|+|+|++++++++++.+.. ..+++|++++|++++++.++++.++.++++++++++.+++++.|+++..+
T Consensus 245 t~~K~lggG~pigav~~~~~i~~~~~~---~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~ 321 (397)
T TIGR03246 245 TSAKALGGGFPIGAMLTTTEIAAHLKV---GTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINAR 321 (397)
T ss_pred EeehhhhCCcceeEEEEcHHHHHhccC---CCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999989999999999999888863 34567899999999999999999877889999999999999999998777
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~ 405 (411)
++...++++.|.++.+++.+. .......+++.|.++|+++.+.+.+.+|+ ++.+|++++++++++|+
T Consensus 322 ~~~~~~vrg~G~~~~i~~~~~-----------~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~ 390 (397)
T TIGR03246 322 YNVFSEIRGKGLLIGAVLTEA-----------YQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFE 390 (397)
T ss_pred CCCeEeeecCceEEEEEEcCc-----------hhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 777788899999999988431 11245788999999999998876667777 79999999999999999
Q ss_pred HHHHhC
Q 015230 406 KVLRQI 411 (411)
Q Consensus 406 ~~~~~~ 411 (411)
+++.++
T Consensus 391 ~~l~~~ 396 (397)
T TIGR03246 391 RAIEQV 396 (397)
T ss_pred HHHHHh
Confidence 998763
No 42
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-55 Score=417.42 Aligned_cols=374 Identities=29% Similarity=0.461 Sum_probs=315.3
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC--CCC
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SIE 93 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~--~~~ 93 (411)
|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.... ++.+...++++++.+..+ +.+
T Consensus 23 p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK06777 23 DFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVTLAERINALAPIDGPA 102 (421)
T ss_pred CeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCChHHHHHHHHHHHhCCCCCCc
Confidence 789999999999999999999999999999999999999999999999864322 356778899999999886 368
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCC-CCCCCCCCCCCCceeecCCC---
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETLTAPFN--- 168 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~--- 168 (411)
+++|++||+||++.|+++++.++++.+|+.+.++|||.+..++.+++.. .....+ +...+ +..++++
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~--------~~~~~~p~~~ 174 (421)
T PRK06777 103 KTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGS--------IFHALYPNEL 174 (421)
T ss_pred eEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCC--------cEEcCCCccc
Confidence 9999999999999999999999999999999999999999988877642 121111 11111 1122211
Q ss_pred -------CHHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccc
Q 015230 169 -------DVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 238 (411)
Q Consensus 169 -------d~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~ 238 (411)
+++.+++.+++ .++++++|++||+++++|...++++|+++|+++|++||+++|+||+|+|| ++|.+++.+
T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~ 254 (421)
T PRK06777 175 HGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAME 254 (421)
T ss_pred cCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhh
Confidence 36678888864 45789999999999999999999999999999999999999999999999 999888888
Q ss_pred ccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015230 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 318 (411)
Q Consensus 239 ~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (411)
++++.||++++||++++|+|+||+++++++++.+.. ..+++|+++++++++++.++++.+++++++++++++.++++
T Consensus 255 ~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~ 331 (421)
T PRK06777 255 YYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAP---GGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLV 331 (421)
T ss_pred hcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCC---CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 889999999999999999999999999999888763 23667999999999999999999888899999999999999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceee--ecCCCH
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSS 394 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~~~t~ 394 (411)
+.|+++..+++.+..+++.|+++.+++...... .+....+..+.+.++++||++.+++. +.+|+ |+++|+
T Consensus 332 ~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~------~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~ 405 (421)
T PRK06777 332 EVLEKAKASCPAIVDIRARGSMVAVEFNDPQTG------KPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPD 405 (421)
T ss_pred HHHHHHHHhCCCeEEecCceEEEEEEEecCccC------CccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCH
Confidence 999999888888888999999999988542110 12333456778888999999998752 45666 678999
Q ss_pred HHHHHHHHHHHHHHH
Q 015230 395 DDIQHTITAAEKVLR 409 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~ 409 (411)
+++++++++|++++.
T Consensus 406 ~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 406 AQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998874
No 43
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-55 Score=418.15 Aligned_cols=384 Identities=25% Similarity=0.332 Sum_probs=314.7
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. .++..++...+++++|.+..+ +.+
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 107 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLN 107 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 4889999999999999999999999999999999999999999999999843 234567888999999999987 578
Q ss_pred EEEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCC-ceeec
Q 015230 94 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATY-ETLTA 165 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~-~~~~~ 165 (411)
+++|++||+||++.|+++++.++ ++.+||++.++|||.+..++.+++.......+ +...+....+.. .....
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~ 187 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARN 187 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhcc
Confidence 99999999999999999999874 46789999999999998888877754332211 111111000000 00111
Q ss_pred CCC---------CHHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 166 PFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 166 ~~~---------d~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
++. +.+++++.++.. ++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~ 267 (442)
T PRK13360 188 AFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP 267 (442)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 110 246778888653 4689999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCCC----CcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~----~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
++.+++++.||++++||++++| +|+|.+++++++++.+.... ..++++|++++|++++++.++++.++++++.++
T Consensus 268 ~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~ 347 (442)
T PRK13360 268 FAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTR 347 (442)
T ss_pred hhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999988 79999999999988775321 234678999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee-
Q 015230 310 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 388 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~- 388 (411)
++++.+++++.|+++. +++.+.++++.|++..+++..... .....+..+.+.|.++||++.+.+ +.+|+
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~--------~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~ 417 (442)
T PRK13360 348 AARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDG--------KPGKRAYEVFLKCFEKGLMIRYTG-DILALS 417 (442)
T ss_pred HHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCC--------CcchhHHHHHHHHHHCCcEEEecC-CEEEEe
Confidence 9999999999999874 367778899999999988854221 112234678888999999998765 44555
Q ss_pred -ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 -SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++.+|++++|+++++|+++++++
T Consensus 418 Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 418 PPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHh
Confidence 68999999999999999998764
No 44
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-55 Score=418.58 Aligned_cols=383 Identities=28% Similarity=0.370 Sum_probs=317.2
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.... .+..+...+++++|.+..+ +.+.
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~ 105 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDC 105 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 48999999999999999999999999999999999999999999999985322 2467888999999999995 6789
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCC-CCCCCCCCCCCCcee---------
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETL--------- 163 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~--------- 163 (411)
++|++||+||++.||++++.++++.+||.++++|||++..++.+.+.. ...... +...++...+.....
T Consensus 106 v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPE 185 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 999999999999999999999999999999999999999987766531 111111 111111000000000
Q ss_pred ecCCCCHHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccccc
Q 015230 164 TAPFNDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 240 (411)
Q Consensus 164 ~~~~~d~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~ 240 (411)
....++++++++.+++ .++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|..++.+++
T Consensus 186 ~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~ 265 (433)
T PRK08117 186 VCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTF 265 (433)
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhc
Confidence 1112367778888764 34689999999999999999999999999999999999999999999999 99988777888
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 320 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
++.||++|+||++++|+|+|++++++++++.+.. ..+++|++++|++++++.++++.++.++++++++++.++++++
T Consensus 266 gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~---~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~ 342 (433)
T PRK08117 266 GVVPDIMTIAKGIASGLPLSAVVASKELMEQWPL---GSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALER 342 (433)
T ss_pred CCCCCEeehhhhccCCCcceeEEEcHHHHhhccC---CCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888753 3467789999999999999999998788999999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDD 396 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~~ 396 (411)
|+++..+++.+.++++.|+++++++.+++. .++......+.+.+.++||++.+.+ .+.+|+ ++++|+++
T Consensus 343 L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~-------~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~ 415 (433)
T PRK08117 343 LEVLKEKHPVIGDVRGIGLMIGIEIVDPDG-------EPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEE 415 (433)
T ss_pred HHHHHhcCCceeeeecCCcEEEEEEecCCC-------CcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHH
Confidence 999887788888899999999999965421 1233456788899999999987643 245665 58999999
Q ss_pred HHHHHHHHHHHHHhC
Q 015230 397 IQHTITAAEKVLRQI 411 (411)
Q Consensus 397 i~~~i~~l~~~~~~~ 411 (411)
|++++++|.++++++
T Consensus 416 i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 416 IDEGLDILDEALTEY 430 (433)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998753
No 45
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=2e-55 Score=416.25 Aligned_cols=375 Identities=26% Similarity=0.409 Sum_probs=316.4
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC--CCC
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SIE 93 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~--~~~ 93 (411)
|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... .+.++...++++.|.+..+ +.+
T Consensus 23 ~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK09792 23 NFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA 102 (421)
T ss_pred CeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCc
Confidence 78999999999999999999999999999999999999999999999985432 2357778899999999886 347
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCCCCCCCCCCCCCCceeecCC-----
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPF----- 167 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~----- 167 (411)
+++|++||+||++.|+++++.++++.+|+++.++|||.+..++..++.. .....+... + ..+..++.
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~---~----~~~~~v~~p~~~~ 175 (421)
T PRK09792 103 KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPF---P----GSVYHVPYPSDLH 175 (421)
T ss_pred eEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCC---C----CCcEEcCCCcccc
Confidence 9999999999999999999999999999999999999999988876642 122111100 0 11222222
Q ss_pred -----CCHHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccc
Q 015230 168 -----NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 239 (411)
Q Consensus 168 -----~d~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~ 239 (411)
++++.+++.+++ .++++++|++||+++++|...++++|+++|+++|++||+++|+||+++|| ++|.+++.++
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~ 255 (421)
T PRK09792 176 GISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDH 255 (421)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHh
Confidence 245788888874 24679999999999999999999999999999999999999999999999 9998888888
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.||++|+||++++|+|+|++++++++++.+.. ..+++|+.+++++|+++.+.++.++++++.++++++.+++++
T Consensus 256 ~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 332 (421)
T PRK09792 256 YADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAP---GGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKN 332 (421)
T ss_pred cCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999888763 346789999999999999999999888899999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSD 395 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~ 395 (411)
.|+++..+++.+..+++.|+++++++.+.+.. .+.......+.+.+.++||++.+.+ .+.+|+ +++++++
T Consensus 333 ~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~------~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ 406 (421)
T PRK09792 333 TLIDAKESVPAIAAVRGLGSMIAAEFNDPQTG------EPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDA 406 (421)
T ss_pred HHHHHHHhCCCcceecccceEEEEEecCCccC------CcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHH
Confidence 99999888888889999999999999643211 1223456789999999999997543 245555 6779999
Q ss_pred HHHHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKVLR 409 (411)
Q Consensus 396 ~i~~~i~~l~~~~~ 409 (411)
++++++++|.++++
T Consensus 407 ei~~~~~~l~~~l~ 420 (421)
T PRK09792 407 QFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999885
No 46
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-55 Score=417.06 Aligned_cols=386 Identities=27% Similarity=0.397 Sum_probs=317.8
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC-CC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~-~~ 92 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++.... +.++...++++.|.+..+ ..
T Consensus 22 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~ 101 (443)
T PRK08360 22 YYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEPLLLAEKLIEIAPGDN 101 (443)
T ss_pred cCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCCC
Confidence 34889999999999999999999999999999999999999999999999864332 346778999999999987 45
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCCCCCCCCCCCCCCceeecCC----
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF---- 167 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~---- 167 (411)
++++|++||+||++.||++++.++++.+|+.+.++|||.+..++...+... .........+.......+....++
T Consensus 102 ~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK08360 102 PKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEP 181 (443)
T ss_pred CEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCch
Confidence 899999999999999999999999999999999999999988887766321 111110011110000011111111
Q ss_pred -----CCHHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccc
Q 015230 168 -----NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 239 (411)
Q Consensus 168 -----~d~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~ 239 (411)
++.+.+++.+++ .++++++|++||+++++|.+.++++|+++|.++|++||+++|+||+|+|| ++|.+++.++
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~ 261 (443)
T PRK08360 182 GSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEH 261 (443)
T ss_pred hhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhh
Confidence 234556677764 34689999999999999999999999999999999999999999999999 9998777777
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.||++++||++++|+|+|++++++++++.+.. ..+.+|+.+++++++++.++++.++++++.++++++++++++
T Consensus 262 ~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 338 (443)
T PRK08360 262 FGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPP---LAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKK 338 (443)
T ss_pred cCCCCCEEEecccccCCceeEEEEEcHHHHhhhcC---CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999888863 336679999999999999999999888899999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 397 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i 397 (411)
.|+++..+++.+.++++.|+++.+++.+.... +.++...+..+.+.|+++|+++.+...+.+|+ ++++|++++
T Consensus 339 ~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~i 413 (443)
T PRK08360 339 RLEEMKKKHELIGDVRGIGLMIGVDLVKDRET-----KERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVL 413 (443)
T ss_pred HHHHHHHhCCCeeeeeccceEEEEEEecCCcc-----cCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHH
Confidence 99999888888889999999999999643210 11233445788899999999998765566666 899999999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
+++++++++++++
T Consensus 414 d~~~~~l~~~l~~ 426 (443)
T PRK08360 414 DEGLDILEEAIED 426 (443)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998875
No 47
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.8e-55 Score=417.61 Aligned_cols=385 Identities=26% Similarity=0.356 Sum_probs=314.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCC-CC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. ...+..+...+++++|.+..+ +.
T Consensus 30 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~ 109 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGL 109 (445)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCC
Confidence 35889999999999999999999999999999999999999999999999843 223567888899999999987 57
Q ss_pred CEEEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCc-eee
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYE-TLT 164 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~-~~~ 164 (411)
++++|++||+||++.|+++++.++ ++.+||.+.++|||.+..++..++.......+ +...++....... ...
T Consensus 110 ~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (445)
T PRK09221 110 DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPE 189 (445)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccc
Confidence 899999999999999999998774 36789999999999999888777653222111 1111111000000 111
Q ss_pred cCCC---------CHHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc
Q 015230 165 APFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233 (411)
Q Consensus 165 ~~~~---------d~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~ 233 (411)
.++. +.+++++.+++. .+++++|++||+++++|++.++++|+++|+++|++||+++|+||+|+|| |+|.
T Consensus 190 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~ 269 (445)
T PRK09221 190 NAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA 269 (445)
T ss_pred cccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch
Confidence 0010 145778888754 3689999999999999999999999999999999999999999999999 9999
Q ss_pred CccccccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCCC----CcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~----~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
+++.+++++.||++++||++++| +|+|.+++++++++.+.... ...+++|++++|++++++.++++.++++++.+
T Consensus 270 ~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~ 349 (445)
T PRK09221 270 AFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFE 349 (445)
T ss_pred hhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999988 79999999999988875321 23467899999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 388 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 388 (411)
+++++++++++.|+++. .++.+.++++.|++..+++..... .....+..+.+.++++||++.+.+ +.+|+
T Consensus 350 ~~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~--------~~~~~~~~~~~~~~~~Gv~~~~~~-~~lr~ 419 (445)
T PRK09221 350 RAAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPG--------APGARGYEAFMKCFEKGLLVRYTG-DTIAL 419 (445)
T ss_pred HHHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEecccc--------cccchHHHHHHHHHHCCeEEeecC-CEEEE
Confidence 99999999999999884 467778899999999999864211 111234578899999999998765 45665
Q ss_pred --ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 389 --SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 389 --~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++++|++++++++++|++++.++
T Consensus 420 ~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 420 SPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred ECCccCCHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999998764
No 48
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.2e-55 Score=415.05 Aligned_cols=383 Identities=25% Similarity=0.347 Sum_probs=315.6
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC--CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~--~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++.... .+.+...+++++|.+..+ +.
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 94 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGP 94 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999999854322 446678899999999887 35
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCC-CCCCCCCCCCCCcee-------
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETL------- 163 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~------- 163 (411)
++++|++||+||++.|+++++.++++.+||.+.++|||.+..++.+++.. .....+ +...+....+.....
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 79999999999999999999999999999999999999999998776642 111111 111111000000000
Q ss_pred ecCCC-CHHHHHHHHH--cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccc
Q 015230 164 TAPFN-DVSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 239 (411)
Q Consensus 164 ~~~~~-d~~~l~~~~~--~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~ 239 (411)
..+.+ +++.+++.+. ..++++++||+||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|.++.+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~ 254 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEH 254 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhh
Confidence 01111 2567777764 345789999999999999999999999999999999999999999999999 9998888888
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.||++++||++++|+|+||+++++++++.+.. ..+++|+++++++++++.++++.++++++.+++++..+++++
T Consensus 255 ~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 331 (420)
T TIGR00700 255 EGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAP---GGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD 331 (420)
T ss_pred cCCCCCEEEeeccccCCcceEEEEecHHHHhhcCC---CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999888763 346779999999999999999998888999999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSD 395 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~ 395 (411)
+|+++...++.+..+++.|+++++++.+... ..++...+..+.+.+.++||++.|++ .+.+|+ +++++++
T Consensus 332 ~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~------~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~ 405 (420)
T TIGR00700 332 RLTTLKAVDPRIGDVRGLGAMIAVELVDPGT------TEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDE 405 (420)
T ss_pred HHHHHHhhCCCEEEeeccceEEEEEEecCCC------CCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHH
Confidence 9999988788888899999999999854211 11344456788888899999999864 245666 4568999
Q ss_pred HHHHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKVLR 409 (411)
Q Consensus 396 ~i~~~i~~l~~~~~ 409 (411)
++++++++|.++++
T Consensus 406 ~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 406 LLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999875
No 49
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-55 Score=417.34 Aligned_cols=382 Identities=30% Similarity=0.443 Sum_probs=317.8
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC--CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP--SI 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~--~~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++... .+.++...++++.|.+..+ ..
T Consensus 36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 115 (441)
T PRK05769 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFYYEPAVELAERLVEIAPGGFE 115 (441)
T ss_pred CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccCcccCCHHHHHHHHHHHHhCCCCCC
Confidence 588999999999999999999999999999999999999999999999985432 2457888999999999987 36
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCceeecCCC--
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPFN-- 168 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~-- 168 (411)
++++|++||+||++.|+++++.++++.+|+.+.++|||.+..++.+++... ....+ +...++........+..+++
T Consensus 116 ~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (441)
T PRK05769 116 KKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIE 195 (441)
T ss_pred CEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCC
Confidence 899999999999999999999999999999999999999999887765422 22111 22223322222223333333
Q ss_pred C--------HHHHHH-HHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 169 D--------VSALEN-LFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 169 d--------~~~l~~-~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
+ .+.+++ .+++ .++++++|++||+++++|.+.++++|+++|.++|++||+++|+||+|+|| ++|.+++
T Consensus 196 ~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a 275 (441)
T PRK05769 196 NPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFA 275 (441)
T ss_pred chHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceeh
Confidence 1 334555 3332 35689999999999999999999999999999999999999999999999 9998888
Q ss_pred ccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015230 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316 (411)
Q Consensus 237 ~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 316 (411)
.+++++.||++++||++++|+|+|++++++++++.+. ..+++|++++|++++++.++++.+++ ++.+++++++++
T Consensus 276 ~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~~----~~~~~T~~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~ 350 (441)
T PRK05769 276 IEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLPP----GSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEY 350 (441)
T ss_pred hhccCCCCCEEEEcccccCCcccEEEEEehhhhhcCC----CCCCCCCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 8889999999999999999999999999988875332 34678999999999999999999988 999999999999
Q ss_pred HHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCH
Q 015230 317 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSS 394 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~ 394 (411)
+++.|+++..+++.+.++++.|+++.+++.+.. ..+.......+.+.++++||++.+.+.+.+++ ++++|+
T Consensus 351 l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~ 423 (441)
T PRK05769 351 LRKELKELKEKYEFIGDVRGLGLMIGVELVKDR-------KEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLIITE 423 (441)
T ss_pred HHHHHHHHHHhCCCeeeeecceEEEEEEeccCC-------ccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCCCH
Confidence 999999998888888899999999999995432 01233445778889999999998876566655 688999
Q ss_pred HHHHHHHHHHHHHHHhC
Q 015230 395 DDIQHTITAAEKVLRQI 411 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~~~ 411 (411)
+||+++++++++++.++
T Consensus 424 ~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 424 EEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998763
No 50
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-56 Score=380.65 Aligned_cols=370 Identities=27% Similarity=0.365 Sum_probs=323.8
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCCCCCEEE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVR 96 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~v~ 96 (411)
|+++.+++|+++||.+|++|+||++.+++.+-||+||.+.+++.++.++... -.+..+...++++.+.+.+ +.+.++
T Consensus 42 pvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafYnd~~~~f~~~vt~lf-~~~kvl 120 (427)
T KOG1402|consen 42 PVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFYNDVLGEFAEYVTKLF-GYDKVL 120 (427)
T ss_pred ceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHhhhhHHHHHHHHHHhc-Ccceee
Confidence 8899999999999999999999999999999999999999999999998532 2355777788899888888 788999
Q ss_pred EeCChHHHHHHHHHHHHhcc--------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 97 FVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 97 ~~~~g~~a~~~al~~~~~~~--------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
-+|+|.||++.|++++|... .+.+++...+.|||.+.++..+++++--+ .++-......+..+|++
T Consensus 121 pmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~------~~fgp~~P~~~~~v~Y~ 194 (427)
T KOG1402|consen 121 PMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSW------DGFGPFLPGVVDKVPYG 194 (427)
T ss_pred ecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchh------hccCCCCCCcceeeccC
Confidence 99999999999999998431 23467778899999999998888774222 12211112236678999
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~ 247 (411)
|.++++.+++. .++++|++||.+++.|++.|++.|+++++++|.||++++|.||+|+|+ |+|++.+.++..+.||++
T Consensus 195 d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDiv 272 (427)
T KOG1402|consen 195 DAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIV 272 (427)
T ss_pred CHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeE
Confidence 99999999985 689999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 015230 248 TLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 326 (411)
Q Consensus 248 ~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 326 (411)
.|+|+++|| +|++.+.++++++-.+. +.-|++|+++||++++++.++++.+.++++.++..+++..++.+|+++..
T Consensus 273 ilgKalSGG~~Pvsavl~~~~im~~~~---pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~ 349 (427)
T KOG1402|consen 273 ILGKALSGGVYPVSAVLADDDIMLNIK---PGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQK 349 (427)
T ss_pred EEeccccCCeeeeEEEEecHHHHhccC---CCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999 89999999999988877 45699999999999999999999999999999999999999999999988
Q ss_pred hcC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHH
Q 015230 327 KAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITA 403 (411)
Q Consensus 327 ~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~ 403 (411)
+.| ....++++|++..+++...+. ...++..++-.++++|++..|-..+-+|+ |+.++++|+++.+++
T Consensus 350 ~~p~~v~~VRGrGl~~ai~i~~~~~---------~~~~aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~ 420 (427)
T KOG1402|consen 350 KFPHVVKEVRGRGLLNAIVINPSKT---------SGQDAWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEA 420 (427)
T ss_pred cccchhheeeccceEEEEEeccccc---------cchhHHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHH
Confidence 776 567899999999999864321 23556788999999999999988777776 799999999999999
Q ss_pred HHHHHH
Q 015230 404 AEKVLR 409 (411)
Q Consensus 404 l~~~~~ 409 (411)
+.+++.
T Consensus 421 i~k~i~ 426 (427)
T KOG1402|consen 421 IEKTIA 426 (427)
T ss_pred HHHHhc
Confidence 998764
No 51
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-55 Score=416.56 Aligned_cols=383 Identities=22% Similarity=0.297 Sum_probs=314.5
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
.|+++.+++|+++||.||++|+||.++ ++.++||+||++.+++.+++++.... .+..+...+++++|.+..+ ..++
T Consensus 54 ~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 132 (459)
T PRK06082 54 CLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNR 132 (459)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCE
Confidence 478999999999999999999999855 77899999999999999999985322 3568889999999999997 4689
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCCCCCCCceeecCCCC----
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND---- 169 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d---- 169 (411)
++|++||+||++.|+++++.++++.+|+.+.++|||.+..++.+++.......+ +...++...+.......++++
T Consensus 133 v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06082 133 VLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGS 212 (459)
T ss_pred EEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHH
Confidence 999999999999999999999999999999999999998888777653332211 222222111112222333333
Q ss_pred ----HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCc
Q 015230 170 ----VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 244 (411)
Q Consensus 170 ----~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~ 244 (411)
++.+++.+++. +++++||+||++++ |.+.++++|+++|+++|++||+++|+||+++|| |+|.+++.+++++.|
T Consensus 213 ~~~~~~~l~~~i~~~-~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~P 290 (459)
T PRK06082 213 DVHYADYLEYVIEKE-GGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEP 290 (459)
T ss_pred HHHHHHHHHHHHhcC-CCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCC
Confidence 35577777653 57999999999987 477889999999999999999999999999999 999999999999999
Q ss_pred chhhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Q 015230 245 DLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 245 d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 323 (411)
|++++||+++|| +|+|.+++++++.+.+.. ...+ +|++++|++++++.+.++.+++++++++++++++++++.|++
T Consensus 291 Div~~gKgl~gG~~P~~av~~~~~i~~~~~~--~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 291 DILCIGKGLGGGLVPIAAMITKDKYNTAAQI--SLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLE 367 (459)
T ss_pred CEEEecccccCCCCcceEEEEcHHHHhhccC--CCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999998 599999999887654421 2224 699999999999999999998889999999999999999999
Q ss_pred HHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHH
Q 015230 324 AGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTI 401 (411)
Q Consensus 324 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i 401 (411)
+..+++.+.++++.|+++.+++..+... ..+....+..+...+.++|+++.+.+.+.+++ |+++|+++|++++
T Consensus 368 l~~~~~~i~~vrG~Gl~~~ve~~~~~~~-----~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~ 442 (459)
T PRK06082 368 MKAKYPLIGDVRGIGLLWGVELVTDRHT-----KERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQAL 442 (459)
T ss_pred HHhhCCCeeeeeeccceeEEEEccCccc-----cCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHH
Confidence 9888899999999999999999643211 11222345678889999999998865566655 6899999999999
Q ss_pred HHHHHHHHhC
Q 015230 402 TAAEKVLRQI 411 (411)
Q Consensus 402 ~~l~~~~~~~ 411 (411)
+++++++.++
T Consensus 443 ~~l~~~l~~~ 452 (459)
T PRK06082 443 AILEEAIAKI 452 (459)
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 52
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.9e-55 Score=416.04 Aligned_cols=377 Identities=27% Similarity=0.381 Sum_probs=319.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~-~~~~~~~~~l~~~l~~~~~-~~~ 93 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++.. + .++++...++++.|.+..+ +.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 58899999999999999999999999999999999999999999999998542 2 4567888999999999987 578
Q ss_pred EEEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC
Q 015230 94 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (411)
+++|++||+||++.|++++|.+ +++.+||.+.++|||.+..++.+.+........ .+.. .....+.+++
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~---~~~~--~~~~~~~~~~ 178 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALY---TPLL--FEQVTAPFPP 178 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccc---cCcC--CCCEEeCCCc
Confidence 9999999999999999999887 578899999999999999988777654322111 1111 1123344555
Q ss_pred CC-----HHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccccc
Q 015230 168 ND-----VSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 240 (411)
Q Consensus 168 ~d-----~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~ 240 (411)
+| ++.+++.++++++++++|++|| +++++|...++++|+++|+++|++||+++|+||+|+|| ++|.+++.+++
T Consensus 179 ~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~ 258 (423)
T PRK05964 179 DGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQA 258 (423)
T ss_pred chhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhc
Confidence 56 8888888887667899999999 68889999999999999999999999999999999999 99988888889
Q ss_pred CCCcchhhhhhhccCC-cccccccccHHHHHHhcCC---CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~ 316 (411)
++.||++++||+++|| +|+|++++++++.+.+... ....+++|+++++++++++.++++.++.+++.++++++.++
T Consensus 259 ~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~ 338 (423)
T PRK05964 259 GVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAG 338 (423)
T ss_pred CCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999987 8999999999999887531 23457789999999999999999999888899999999999
Q ss_pred HHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCH
Q 015230 317 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSS 394 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~ 394 (411)
+++.|+++. .++.+.++++.|+++.+++.+.+ .......+.+.|.++||++.+.+ +.+|+ ++++|+
T Consensus 339 l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~----------~~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~ 406 (423)
T PRK05964 339 LAEGLEPFR-DLPGVADVRVLGAIGAVELDRPV----------LERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITA 406 (423)
T ss_pred HHHHHHhhc-cCCCeEEeecccEEEEEEeccCc----------chhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCH
Confidence 999999874 45666678899999999985421 01234678899999999998865 45665 678999
Q ss_pred HHHHHHHHHHHHHHHhC
Q 015230 395 DDIQHTITAAEKVLRQI 411 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~~~ 411 (411)
+|||+++++|+++++++
T Consensus 407 edId~~v~~l~~al~~~ 423 (423)
T PRK05964 407 EELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999999875
No 53
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=4.6e-55 Score=413.73 Aligned_cols=369 Identities=25% Similarity=0.355 Sum_probs=316.7
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.++++++++||+||++.+|+.+++++.. ...+..+...++++.+++.. +.++
T Consensus 20 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~ 98 (406)
T PRK12381 20 PAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDAT-FADR 98 (406)
T ss_pred CCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhC-CCCe
Confidence 45789999999999999999999999999999999999999999999998742 22345777889999999887 5689
Q ss_pred EEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
++|++||+||++.|+++++.++ ++.+|+.++++|||.+..+..+++....... .... ...+..++++
T Consensus 99 v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~ 171 (406)
T PRK12381 99 VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQD---FAPL----PPDIRHAAYN 171 (406)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccC---CCCC----CCCeeEeCCC
Confidence 9999999999999999998874 6788999999999999888777775332211 1111 1235678899
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~ 247 (411)
|++++++.++ +++++|++||+++++|++.++++|+++|+++|++||+++|+||+|+|| ++|.+++.+++++.||++
T Consensus 172 d~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~ 248 (406)
T PRK12381 172 DLNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL 248 (406)
T ss_pred CHHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEE
Confidence 9999998886 479999999999999999999999999999999999999999999999 999877777889999999
Q ss_pred hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 248 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 248 ~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
|+||++++|+|+|++++++++++.+.. ..+++|+++++++++++.++++.++.++++++++++.+++++.|+++..+
T Consensus 249 t~sK~l~gG~~ig~~~~~~~~~~~~~~---~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~ 325 (406)
T PRK12381 249 TTAKALGGGFPIGAMLTTEKCASVMTV---GTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINAR 325 (406)
T ss_pred EehhhhhCCCceEEEEEcHHHHhhcCC---CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999988863 34667899999999999999999877889999999999999999998777
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~ 405 (411)
++.+..+++.|+++++++.+. ....+..+.+.|+++||++.+.+.+.+|+ ++++|++++++++++|+
T Consensus 326 ~~~~~~vrg~Gl~~~~~l~~~-----------~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~ 394 (406)
T PRK12381 326 YGLFSEIRGLGLLIGCVLNAE-----------YAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFA 394 (406)
T ss_pred CCCEEEEecCeEEEEEEecCc-----------hhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHH
Confidence 777778889999999988431 11234688899999999998776667776 57799999999999999
Q ss_pred HHHHh
Q 015230 406 KVLRQ 410 (411)
Q Consensus 406 ~~~~~ 410 (411)
+++++
T Consensus 395 ~~l~~ 399 (406)
T PRK12381 395 RACER 399 (406)
T ss_pred HHHHH
Confidence 98865
No 54
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=5.5e-55 Score=411.90 Aligned_cols=376 Identities=24% Similarity=0.315 Sum_probs=309.9
Q ss_pred eEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-CCCEE
Q 015230 20 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEMV 95 (411)
Q Consensus 20 ~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~v 95 (411)
+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.... .+.++...++++.|.+..+ +.+++
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 107 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKI 107 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEE
Confidence 4689999999999999999999999999999999999999999999985422 3567888999999999987 67899
Q ss_pred EEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCcee---e
Q 015230 96 RFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETL---T 164 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~---~ 164 (411)
+|++||+||++.||++++.+ +++.+||.+.++|||.+..++.+++... ....+ +........+..... .
T Consensus 108 ~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 187 (429)
T PRK06173 108 FFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEE 187 (429)
T ss_pred EEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchh
Confidence 99999999999999999987 4578899999999999887776655311 11111 001110000000000 0
Q ss_pred cCCCCHHHHHHHHHcCCCcEEEEEEccc-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCC
Q 015230 165 APFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 242 (411)
Q Consensus 165 ~~~~d~~~l~~~~~~~~~~~~~vi~~~~-~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~ 242 (411)
+..++++.+++.++++++++++|++||+ ++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++.+++++
T Consensus 188 ~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv 267 (429)
T PRK06173 188 WNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV 267 (429)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCC
Confidence 0011467788888766678999999997 9999999999999999999999999999999999999 9999988899999
Q ss_pred CcchhhhhhhccCC-cccccccccHHHHHHhcCC--CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 243 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 243 ~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~--~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
.||++++||+++|| +|+|.+++++++.+.+... ....+++|+.++|++|+++.++++.+++++++++++++.+++++
T Consensus 268 ~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 347 (429)
T PRK06173 268 VPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQ 347 (429)
T ss_pred CCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999 5899999999998887532 22457789999999999999999999888899999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 397 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i 397 (411)
.|+++ ..++.+.++++.|+++.+++.+. ..+..+.+.|+++||++.+.+ +.+++ |+++|++++
T Consensus 348 ~L~~~-~~~~~v~~vRg~Gl~~~iel~~~-------------~~~~~i~~~l~e~Gi~v~~~g-~~l~~~Ppl~it~~ei 412 (429)
T PRK06173 348 ELAPA-AEFDSVAEVRVLGAIGVVEMKEP-------------VNMATLQPRFVEHGIWVRPFG-KLVYIMPPFIISPDEL 412 (429)
T ss_pred HHHHh-hcCCCeeeeeccceEEEEEeCCc-------------ccHHHHHHHHHHCCeEEEecC-CEEEEeCCccCCHHHH
Confidence 99976 44666778899999999999532 123678899999999998875 46654 799999999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|++++.+
T Consensus 413 ~~~~~~l~~~l~~ 425 (429)
T PRK06173 413 SQLTSGLLRVLKQ 425 (429)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999875
No 55
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=9.5e-55 Score=407.80 Aligned_cols=374 Identities=27% Similarity=0.421 Sum_probs=311.9
Q ss_pred CccCcccccccCCCCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHH
Q 015230 4 GVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVL 81 (411)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l 81 (411)
-+++..+.+.. .|+++.+++|+++||.||++|+||.++++++++||+||++.+++.+++++... ..+..+...++
T Consensus 7 ~~~~~~~~~~~---~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~l 83 (395)
T PRK03715 7 PIDSLMYITNR---PDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKL 83 (395)
T ss_pred hhhhhhcccCC---CCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHH
Confidence 35555555443 47899999999999999999999999999999999999999999999987432 23457788899
Q ss_pred HHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhcc-----CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCCCC
Q 015230 82 AEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVP 155 (411)
Q Consensus 82 ~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~-----~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~ 155 (411)
++++.+.. +.++++|++||+||++.|+++++.+. ++.+||+++++|||.+..++.+++........ +...
T Consensus 84 a~~l~~~~-~~~~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--- 159 (395)
T PRK03715 84 AGLLTQHS-CFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--- 159 (395)
T ss_pred HHHHhhcc-CCCEEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCC---
Confidence 99998764 56899999999999999999998663 56789999999999999988887753222111 1111
Q ss_pred CCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC
Q 015230 156 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 234 (411)
Q Consensus 156 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~ 234 (411)
.+...+++|++++++.+. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+
T Consensus 160 -----~~~~~~~~d~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~ 231 (395)
T PRK03715 160 -----GFPKAELNDIASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTL 231 (395)
T ss_pred -----CceeeCCchHHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcch
Confidence 223346779999998886 468999999999999999999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT 314 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~ 314 (411)
++.+++++.||++++||++++|+|+|++++++++.. +. ...+++|++++|++++++.++++.+++++++++++++.
T Consensus 232 ~a~~~~gv~PDi~t~gK~lg~G~p~~av~~~~~i~~-~~---~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g 307 (395)
T PRK03715 232 FAYELSGIEPDIMTLGKGIGGGVPLAALLAKAEVAV-FE---AGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARG 307 (395)
T ss_pred hhHhhcCCCCceeeehhhhhCCcceEEEEEcccccc-cc---CCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 999999999999999999999999999999888753 22 23467899999999999999999998889999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc---CeEeccCCCcceee--e
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE---GVYFAPSQFEAGFT--S 389 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gi~v~~~~~~~~~~--~ 389 (411)
++++++|+++..+++ ..++++.|+++.+++.+. ....+.+.+.+. |+++.+...+.+|+ +
T Consensus 308 ~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~--------------~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~ 372 (395)
T PRK03715 308 EYLKEKLLELSEERG-LEGERGEGLLRALLLGKD--------------IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPA 372 (395)
T ss_pred HHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCc--------------hHHHHHHHHHhccCCCEEEeecCCCEEEEeCC
Confidence 999999999877776 456889999999998531 113455555555 99998666667766 7
Q ss_pred cCCCHHHHHHHHHHHHHHHHhC
Q 015230 390 LAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 390 ~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+.+|++++++++++|+++++++
T Consensus 373 l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 373 LNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cccCHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999998764
No 56
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7e-55 Score=410.84 Aligned_cols=376 Identities=20% Similarity=0.290 Sum_probs=307.8
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--C-CCCCHHHHHHHHHHHhhCC-CC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~-~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++... + .+.++...+++++|.+..+ +.
T Consensus 21 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 100 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGL 100 (422)
T ss_pred CCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCc
Confidence 358999999999999999999999999999999999999999999999998532 2 3467788999999999887 57
Q ss_pred CEEEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCC-cccCC-CCCCCCCCCCCCceee
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLT 164 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~ 164 (411)
++++|++||+||++.|+++++.++ ++.+||++.++|||.+..++.+++... ....+ +........+......
T Consensus 101 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 180 (422)
T PRK05630 101 DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRG 180 (422)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccC
Confidence 899999999999999999998874 467899999999999998887765321 11111 1111110000000001
Q ss_pred cCCCC----HHHHHHHHHcCCCcEEEEEEccc-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccc
Q 015230 165 APFND----VSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 238 (411)
Q Consensus 165 ~~~~d----~~~l~~~~~~~~~~~~~vi~~~~-~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~ 238 (411)
.+.++ .+.+++.+. +++++||+||+ ++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~ 257 (422)
T PRK05630 181 SSPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATL 257 (422)
T ss_pred CChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHH
Confidence 11122 234444443 58999999996 9999999999999999999999999999999999999 999999999
Q ss_pred ccCCCcchhhhhhhccCC-cccccccccHHHHHHhcCC---CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 015230 239 YFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT 314 (411)
Q Consensus 239 ~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~ 314 (411)
++++.||+++++|+++|| +|+|++++++++.+.+... ....+++|+.++|++++++.++++.+++++++++++++.
T Consensus 258 ~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g 337 (422)
T PRK05630 258 AAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIE 337 (422)
T ss_pred hcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999999 5899999999999887532 133578899999999999999999998888999999999
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCC
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAH 392 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~ 392 (411)
+++++.|+++. +++.+.++++.|+++.+++... ..+..+.+.++++|+++.+.+ +.+++ |+++
T Consensus 338 ~~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~-------------~~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~i 402 (422)
T PRK05630 338 AELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQP-------------VDMEEATQAAVDHGVWLRPFG-RLVYVMPPYIT 402 (422)
T ss_pred HHHHHHHHHhh-cCCCeeeeeccccEEEEEECCc-------------ccHHHHHHHHHHCCeEEEecC-CEEEEECCccC
Confidence 99999999764 4677889999999999999532 113578889999999998865 55554 7999
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 015230 393 SSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 393 t~~~i~~~i~~l~~~~~~ 410 (411)
|++++|+++++|+++++.
T Consensus 403 t~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 403 TSEQIAQICAALAAAVKA 420 (422)
T ss_pred CHHHHHHHHHHHHHHHhc
Confidence 999999999999999864
No 57
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1e-54 Score=410.30 Aligned_cols=369 Identities=24% Similarity=0.367 Sum_probs=309.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhC--C-C
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAV--P-S 91 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~--~-~ 91 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. ...+..+...+++++|.+.. + +
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 5889999999999999999999999999999999999999999999998632 12244777889999999875 2 2
Q ss_pred C-CEEEE-eCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC--
Q 015230 92 I-EMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 167 (411)
Q Consensus 92 ~-~~v~~-~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (411)
. +++.| ++||+||++.|+++++.++++.+||.+.++|||.+..++..++......... .+ ...+..+|+
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~----~~---~~~~~~~p~~~ 169 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAG----VP---LSNVSRMPYDG 169 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCC----CC---CCCeEECCCCC
Confidence 3 35666 5899999999999999999999999999999999999988877543222111 00 012233333
Q ss_pred ------CCHHHHHHHHHcCC---CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccc
Q 015230 168 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 237 (411)
Q Consensus 168 ------~d~~~l~~~~~~~~---~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~ 237 (411)
++++.+++.++++. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++.
T Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~ 249 (412)
T TIGR02407 170 YLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSF 249 (412)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHh
Confidence 35777888887542 468999999999999999999999999999999999999999999999 99999888
Q ss_pred cccCCCcchhhhhhhccC-CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH-HhcCChHHHHHHHHH
Q 015230 238 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-LKEPGTYEYLNKITG 315 (411)
Q Consensus 238 ~~~~~~~d~~~~sK~~~~-G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~-~~~~~~~~~~~~~~~ 315 (411)
+++++.||++++||++++ |+|+|++++++++ +.+. ...+++|+++++++++++.++++. ++++++.+++++..+
T Consensus 250 ~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~ 325 (412)
T TIGR02407 250 EPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSE 325 (412)
T ss_pred cccCCCCCEEEechhccCCccceeEEEEchhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 899999999999999998 9999999998876 5543 345778999999999999999995 766889999999999
Q ss_pred HHHHHHHHHHHhcC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceee--ec
Q 015230 316 ELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SL 390 (411)
Q Consensus 316 ~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~ 390 (411)
+++++|+++...++ ...++++.|+++++++.+ ......+.+.++++||++.+.+. +.+|+ ++
T Consensus 326 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~-------------~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l 392 (412)
T TIGR02407 326 IIQERLDRIVAEYPELIKQVRGRGLMQGIECGD-------------GDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPL 392 (412)
T ss_pred HHHHHHHHHHhhCCCceEeeecceeEEEEEecC-------------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCC
Confidence 99999999888777 567889999999999943 23457889999999999987543 44554 78
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
++|++++++++++|++++++
T Consensus 393 ~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999864
No 58
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=1e-54 Score=406.65 Aligned_cols=362 Identities=25% Similarity=0.387 Sum_probs=311.8
Q ss_pred EEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEEEEeC
Q 015230 22 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVN 99 (411)
Q Consensus 22 ~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v~~~~ 99 (411)
+.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... .+.++...+++++|.+.. +.++++|++
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~f~~ 79 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASS-FADRVFFCN 79 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcC-CCCeEEEeC
Confidence 36799999999999999999999999999999999999999999985433 244777889999999876 467999999
Q ss_pred ChHHHHHHHHHHHHhccC-------------CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 100 SGTEACMGVLRLARAFTG-------------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 100 ~g~~a~~~al~~~~~~~~-------------~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
||+||++.|+++++.+++ +.+||.+.++|||.+..++...+......++ .+.. ..+..++
T Consensus 80 sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~--~~~~-----~~~~~~~ 152 (382)
T PLN00144 80 SGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPF--EPLM-----PGVTFVE 152 (382)
T ss_pred CcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccC--CCCC-----CCeEEeC
Confidence 999999999999988754 4689999999999999988877653222111 1111 2356788
Q ss_pred CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc
Q 015230 167 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 167 ~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d 245 (411)
++|++.+++.++ .+++++|++||+++++|.+.++.+|+++|+++|++||+++|+||+|+|| ++|.+++.+.+++.||
T Consensus 153 ~~d~~~l~~~~~--~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 153 YGNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CCCHHHHHHhcC--CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 899999998886 3589999999999999999999999999999999999999999999999 9998777778899999
Q ss_pred hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 246 ~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
++||||++++|+|+|++++++++++.+.. ..+.+|+.++|++++++.++++.++++++.++++++++++++.|+++.
T Consensus 231 i~t~sK~l~~G~pig~v~~~~~~~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 231 IMTLAKPLAGGLPIGAVLVTEKVASAINP---GDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred EEEecccccCCcceEEEEEcHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988763 346779999999999999999999888999999999999999999988
Q ss_pred HhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-Ccceee--ecCCCHHHHHHHHH
Q 015230 326 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 326 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~--~~~~t~~~i~~~i~ 402 (411)
.+++....+++.|+++|+++... ...+.+.++++||++.+++ .+.+|+ ++++|+++++++++
T Consensus 308 ~~~~~~~~vrg~G~~~~l~l~~~---------------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~ 372 (382)
T PLN00144 308 GGNPHVKEVRGVGLLVGIQLDVP---------------AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVE 372 (382)
T ss_pred hhCCCceeeecCceEEEEEecCc---------------cHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHH
Confidence 88887788889999999999210 1578899999999999875 356666 56689999999999
Q ss_pred HHHHHHHhC
Q 015230 403 AAEKVLRQI 411 (411)
Q Consensus 403 ~l~~~~~~~ 411 (411)
+|++++.++
T Consensus 373 ~l~~~l~~~ 381 (382)
T PLN00144 373 ILADCLPAL 381 (382)
T ss_pred HHHHHHHhc
Confidence 999998764
No 59
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=1e-54 Score=400.42 Aligned_cols=353 Identities=27% Similarity=0.385 Sum_probs=302.7
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+.+.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++... ..+..+...++++.+.+.. +.++
T Consensus 5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~ 83 (364)
T PRK04013 5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV-NYEY 83 (364)
T ss_pred CCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc-CCCE
Confidence 358889999999999999999999999999999999999999999999998532 2456788899999999887 5689
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
++|++||+||++.|+++++.++++++||+++.+|||.+..++...+......... + ....+..++++|++.++
T Consensus 84 v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~--p-----~~~~~~~~~~~d~~~l~ 156 (364)
T PRK04013 84 VYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFE--P-----LVPGFKHIPFNDVEAAK 156 (364)
T ss_pred EEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCC--C-----CCCCcEEecCCCHHHHH
Confidence 9999999999999999999999999999999999999988887776533221111 0 11235567888999999
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhcc
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG 254 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~ 254 (411)
+.+. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+++|+|+|.+++.+++++.||+++++|+++
T Consensus 157 ~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lg 233 (364)
T PRK04013 157 EAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIG 233 (364)
T ss_pred HHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEeccccc
Confidence 8886 4799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 015230 255 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 334 (411)
Q Consensus 255 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (411)
+|+|+|.++.+.++ . ...+++|+++||++|+++.+.++.++++++.++.++. |+++. .+.+.++
T Consensus 234 gG~P~~a~~~~~~~----~---~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~v 297 (364)
T PRK04013 234 NGVPVSLTLTNFDV----E---RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTT 297 (364)
T ss_pred CCceeEEEEecccc----c---CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceee
Confidence 99999999887664 1 2347789999999999999999999998888887764 23332 2667899
Q ss_pred eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 335 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 335 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++.|+++.+++.++ +..+.+.++++|+++.+.+.+.+++ |+++|++++++++++|+++++++
T Consensus 298 RG~Gl~~gve~~~~---------------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 298 RGRGLMIGIVLKKP---------------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred eeCcEEEEEEeCCc---------------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999421 2578899999999998877666665 79999999999999999998763
No 60
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=4.1e-54 Score=411.21 Aligned_cols=385 Identities=27% Similarity=0.407 Sum_probs=312.5
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCCC-C-
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS-I- 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~~-~- 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... .+..+...++++.|.+..|+ .
T Consensus 36 ~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 115 (451)
T PRK06918 36 IPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVMMYEPYIELAEKLAALAPGSFD 115 (451)
T ss_pred CCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccccccccHHHHHHHHHHHHhCCCCCC
Confidence 368899999999999999999999999999999999999999999999985432 23578889999999999974 3
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC-CcccCC-CCCCCCCCCCCCceeecCCC--
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETLTAPFN-- 168 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 168 (411)
++++|++||+||++.||+++|.++++.+||.+.++|||.+..++.+.+.. .....+ +...++...+.......+..
T Consensus 116 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK06918 116 KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 195 (451)
T ss_pred CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCc
Confidence 69999999999999999999999999999999999999999988776642 122111 11111110000001111110
Q ss_pred --C-----HHHHHHHHHc--CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccc
Q 015230 169 --D-----VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 238 (411)
Q Consensus 169 --d-----~~~l~~~~~~--~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~ 238 (411)
. .+.+++.+.. .++++++||+||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|.+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~ 275 (451)
T PRK06918 196 EEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIE 275 (451)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhH
Confidence 0 2334444421 34689999999999999999999999999999999999999999999999 999877888
Q ss_pred ccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015230 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 318 (411)
Q Consensus 239 ~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (411)
.+++.||++++||++++|+|+||+++++++++.+.. ..+++|+++++++++++.++++.++++++.+++++.+++++
T Consensus 276 ~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~---~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 352 (451)
T PRK06918 276 HFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAP---GELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVM 352 (451)
T ss_pred hcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccCC---CCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 888899999999999999999999999999888763 34677999999999999999999988899999999999999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceee--ecCCCH
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSS 394 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~~~t~ 394 (411)
++|+++..+++.+..+++.|+++.+++.++... ..++...+..+.+.+.++||++.+++. +.+|+ ++++|+
T Consensus 353 ~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~ 427 (451)
T PRK06918 353 NRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKT-----KEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITD 427 (451)
T ss_pred HHHHHHHhhCCCceeeccceeEEEEEEccCCCc-----CCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCH
Confidence 999998777787778889999999888532110 113344567888999999999998642 45665 567899
Q ss_pred HHHHHHHHHHHHHHHh
Q 015230 395 DDIQHTITAAEKVLRQ 410 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~~ 410 (411)
++|++++++|++++++
T Consensus 428 ~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 428 EQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999875
No 61
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-54 Score=443.99 Aligned_cols=386 Identities=24% Similarity=0.296 Sum_probs=320.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCCCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.+++ ..+||+||+|.+|+.++++++ ....+..+...+++++|.+..+ +.+.
T Consensus 605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~ 682 (1013)
T PRK06148 605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTV 682 (1013)
T ss_pred CCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCE
Confidence 35899999999999999999999999985 789999999999999999985 3334678888999999999997 5789
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC-CCCCCCCCCCceeecCCC--C--
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFN--D-- 169 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--d-- 169 (411)
++|++||+||++.||++++.++++.+||++.++|||.+..++.+++........+. ..++........+..+++ +
T Consensus 683 v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 762 (1013)
T PRK06148 683 AFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAE 762 (1013)
T ss_pred EEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhh
Confidence 99999999999999999999999999999999999999988877653211100000 011111111122334443 2
Q ss_pred -----HHHHHHHHH---cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Cccccc
Q 015230 170 -----VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY 239 (411)
Q Consensus 170 -----~~~l~~~~~---~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~ 239 (411)
.+++++.++ ..++++++||+||+++++|.+.++++|+++|+++|++||+++|+|||++|| |+|. ++++++
T Consensus 763 ~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~ 842 (1013)
T PRK06148 763 HGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFET 842 (1013)
T ss_pred hHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhh
Confidence 244555554 334689999999999999999999999999999999999999999999999 9996 889999
Q ss_pred cCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q 015230 240 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319 (411)
Q Consensus 240 ~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (411)
+++.|||+|++|+++||+|+|.+++++++++.+... ..+++||++||++|+++.++++.++++++.++++++++++++
T Consensus 843 ~gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g--~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~ 920 (1013)
T PRK06148 843 QGVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNG--MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLA 920 (1013)
T ss_pred cCCCcceeeecccccCCcceEEEEEcHHHHhhccCC--CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999888642 235689999999999999999999989999999999999999
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--ccee--eecCCCHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSD 395 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~--~~~~~t~~ 395 (411)
.|+++..+++.+.++++.|+++.+++..+... +.+....+..+.+.|+++||++.+.+. +.++ +|+++|++
T Consensus 921 ~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~-----~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~ 995 (1013)
T PRK06148 921 GLRELQDRFDIIGDVRGMGLFLGIELVTDRKT-----KAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRA 995 (1013)
T ss_pred HHHHHHHhCCCceEEeeeceEEEEEecCCccc-----cCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHH
Confidence 99999999999999999999999999643211 113344567899999999999987653 4444 48999999
Q ss_pred HHHHHHHHHHHHHHhC
Q 015230 396 DIQHTITAAEKVLRQI 411 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~~ 411 (411)
++|+++++|+++++++
T Consensus 996 ~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 996 DADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998763
No 62
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=2.8e-54 Score=409.27 Aligned_cols=369 Identities=25% Similarity=0.373 Sum_probs=306.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC---CCCCCCHHHHHHHHHHHhhCC---C
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP---S 91 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~---~~~~~~~~~~~l~~~l~~~~~---~ 91 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.. ...+.++...++++.+.+..+ +
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 5889999999999999999999999999999999999999999999998621 123456778899999998752 2
Q ss_pred CC-EEEE-eCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC--
Q 015230 92 IE-MVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 167 (411)
Q Consensus 92 ~~-~v~~-~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (411)
.+ ++.| ++||+||++.||++++.++++.+||++.++|||.+..++..++......... .+ ...+..+|+
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~----~~---~~~~~~~p~~~ 173 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAG----VP---LNNVTRMPYDG 173 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCC----CC---CCCeEEeCCCC
Confidence 33 6766 4899999999999999999999999999999999999988877543221110 00 012233333
Q ss_pred ------CCHHHHHHHHHcCC---CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccc
Q 015230 168 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 237 (411)
Q Consensus 168 ------~d~~~l~~~~~~~~---~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~ 237 (411)
+|++++++.++++. +++++|++||+++++|++.++++|+++|+++|++||+++|+||+|+|| |+|..+..
T Consensus 174 ~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~ 253 (425)
T PRK09264 174 YFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSF 253 (425)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHH
Confidence 47888898887532 468999999999999999999999999999999999999999999999 99988888
Q ss_pred cccCCCcchhhhhhhccC-CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHH-HHHhcCChHHHHHHHHH
Q 015230 238 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL-KRLKEPGTYEYLNKITG 315 (411)
Q Consensus 238 ~~~~~~~d~~~~sK~~~~-G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l-~~~~~~~~~~~~~~~~~ 315 (411)
+++++.||++|+||++++ |+|+|++++++++ ..+. ...+++|+++++++++++.+++ +.++++++.++++++.+
T Consensus 254 ~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i-~~~~---~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~ 329 (425)
T PRK09264 254 ERAGITPDIVTLSKSISGYGLPMALVLIKPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGE 329 (425)
T ss_pred hhcCCCCCEEEeccccCCCccceEEEEEchhh-hccC---CCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 889999999999999997 9999999998876 3443 3346779999999999999999 56666789999999999
Q ss_pred HHHHHHHHHHHhcCC-ceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceee--ec
Q 015230 316 ELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SL 390 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~--~~ 390 (411)
+++++|+++..+++. ..++++.|+++++++.+ ......+.+.+.++||++.+.+. +.+++ ++
T Consensus 330 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~-------------~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l 396 (425)
T PRK09264 330 LVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD-------------GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPL 396 (425)
T ss_pred HHHHHHHHHHHhCCCceecceecccEEEEEecC-------------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCC
Confidence 999999998776764 36788899999999842 23456889999999999988653 34544 67
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
++|++++++++++|++++++
T Consensus 397 ~~t~~ei~~~~~~l~~~l~~ 416 (425)
T PRK09264 397 TIDEEELEEGLDILEEAVAE 416 (425)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 89999999999999998865
No 63
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=7.1e-53 Score=399.58 Aligned_cols=386 Identities=31% Similarity=0.527 Sum_probs=311.6
Q ss_pred CCCCccCcccccccCC-CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHH
Q 015230 1 MPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLEN 79 (411)
Q Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~ 79 (411)
||+|+++..|.+..+. ..|+++.+++|+++||.||++|+||.+++++.++||+||++.+|+.++++++..+........
T Consensus 12 ~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~ 91 (431)
T PRK06209 12 IPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIEL 91 (431)
T ss_pred CCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCCCCCCHHHH
Confidence 7999999999875443 458999999999999999999999999999999999999999999999999766655666667
Q ss_pred HHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEE-eCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCC
Q 015230 80 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF-EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 158 (411)
Q Consensus 80 ~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 158 (411)
++++.|.+..++.++++|++||+||++.|+++++.++++.+|+.+ ..+||+...... |.. +...+.+...
T Consensus 92 ~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~---g~~------~~~~~~~~~~ 162 (431)
T PRK06209 92 DAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFI---GTT------PMSAGIPASV 162 (431)
T ss_pred HHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCcccccccccc---ccC------CCCCCCChhH
Confidence 899999999876789999999999999999999999999999888 678876322211 110 0011111111
Q ss_pred CCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccc
Q 015230 159 TYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 237 (411)
Q Consensus 159 ~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~ 237 (411)
......++++|++++++.++++++++++|++||++++ .++++|+++|+++|++||+++|+||+++|| +.+ .+..
T Consensus 163 ~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~-~g~~ 237 (431)
T PRK06209 163 SALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM-RGAQ 237 (431)
T ss_pred hccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc-chhh
Confidence 1234567889999999999876678999999998865 677899999999999999999999999999 532 2334
Q ss_pred cccCCCcchhhhhhhccCCcccccccccHHHHHH--hcC---CCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 238 EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM--VAP---AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 238 ~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~--~~~---~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
.++++.||++++||++++|+|+|++++++++++. +.. .....+++|++++|++++++.++++.++++++++++++
T Consensus 238 ~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~ 317 (431)
T PRK06209 238 KLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHE 317 (431)
T ss_pred HHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 4579999999999999999999999999998886 311 12334678999999999999999999988889999999
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCC
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAH 392 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~ 392 (411)
+.+++++.|+++..+++....+++.|.+..+.+...... ..+.......+.+.+.++|+++. .++++..+
T Consensus 318 ~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~~p-----~l~is~~h 387 (431)
T PRK06209 318 QGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGN-----GQPSQAFRTLFLQETIRRGVLMP-----SLVVSYAH 387 (431)
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcc-----cCCcHHHHHHHHHHHHHCCcccc-----cccccccC
Confidence 999999999998888888888888888777766432110 00222233578888999999873 36777899
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 015230 393 SSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 393 t~~~i~~~i~~l~~~~~~ 410 (411)
|+++|++++++|++++++
T Consensus 388 t~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 388 GDADIERTIDAVHGALGV 405 (431)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999998875
No 64
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.7e-53 Score=400.01 Aligned_cols=371 Identities=20% Similarity=0.215 Sum_probs=296.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHH--HHcCC-CCCCCCHHHHHHHHHHHh----hC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET--MKKGT-SFGAPCLLENVLAEMVIS----AV 89 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~--l~~~~-~~~~~~~~~~~l~~~l~~----~~ 89 (411)
..|+.+.+++|+++||.||++|+||.+++++.++||+||++.+|+.++ ..... ...+......++++.+.+ ..
T Consensus 39 ~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~ 118 (464)
T TIGR00699 39 HFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRPALGNFPSKDWAKILKEGILKVA 118 (464)
T ss_pred ccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccccCCcHHHHHHHHHHHHhHHhhC
Confidence 459999999999999999999999999999999999999999999984 33322 123455666778888754 56
Q ss_pred C-CCCEEEEeCChHHHHHHHHHHHHhccC---------------------------CcEEEEEeCCcCCCchhhhhhcCC
Q 015230 90 P-SIEMVRFVNSGTEACMGVLRLARAFTG---------------------------RERIIKFEGCYHGHADPFLVKAGS 141 (411)
Q Consensus 90 ~-~~~~v~~~~~g~~a~~~al~~~~~~~~---------------------------~~~vi~~~~~~~~~~~~~~~~~g~ 141 (411)
+ +.++++|++||+||++.|||+++.+.+ +.+||.+.++|||.+..++..++.
T Consensus 119 p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~ 198 (464)
T TIGR00699 119 PKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRS 198 (464)
T ss_pred CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCC
Confidence 5 678999999999999999999986621 237999999999999999988775
Q ss_pred CCcccCCCCCCC---CCCCCC-Cce-------eecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHH
Q 015230 142 GVATLGLPDSPG---VPKGAT-YET-------LTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 210 (411)
Q Consensus 142 ~~~~~~~~~~~~---~~~~~~-~~~-------~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~ 210 (411)
.......+.... ++.... .+. .....++++.++++++++.+++++||+||+++++|.+.++++|+++|+
T Consensus 199 ~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr 278 (464)
T TIGR00699 199 KPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLR 278 (464)
T ss_pred ccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHH
Confidence 422211111011 110000 000 001113567788888776678999999999999999999999999999
Q ss_pred HHHHHhCCEEEEecccccc-ccccCccccccCCC--cchhhhhhhcc-CCcccccccccHHHHHHhcCCCCcccccCCCC
Q 015230 211 RITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 286 (411)
Q Consensus 211 ~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~--~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~ 286 (411)
++|++||+++|+||+++|| ++|.+++.+++++. ||++++||+++ +|+.+ .. +. +.......+++|+.+
T Consensus 279 ~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG~~~----~~-~~---~~~~~~~~~~~T~~g 350 (464)
T TIGR00699 279 DITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAGYFF----HD-PA---FRPNKPYRQFNTWMG 350 (464)
T ss_pred HHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCCccc----cc-hh---ccCCCCcccccCCCC
Confidence 9999999999999999999 99999999999997 99999999996 56532 22 22 222224567889999
Q ss_pred CHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcC-CceEEe--eecceEEEEEecCCCCCcchhcccchHH
Q 015230 287 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGG--YISGMFGFFFTEGPVYNFEDAKKSETTK 363 (411)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (411)
+|++++++.++++.++++++.++++++++++++.|+++..+++ .+.+++ +.|+++.+++. +...
T Consensus 351 np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~-------------~~~~ 417 (464)
T TIGR00699 351 DPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTP-------------DEAK 417 (464)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecC-------------CHHH
Confidence 9999999999999998899999999999999999999988888 677888 99999999883 1223
Q ss_pred HHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~ 408 (411)
+..+.+.++++|+++.+.+.+.+|+ |+++|++++++++++|.+++
T Consensus 418 ~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 418 RDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred HHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 5788999999999998876566665 79999999999999998864
No 65
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=5.4e-53 Score=399.03 Aligned_cols=366 Identities=27% Similarity=0.398 Sum_probs=311.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+.+.+++|+++||.||++|+||.++++++++||+||++.+++.++++++... .+..+...+++++|.+.. +.++
T Consensus 12 ~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~ 90 (389)
T PRK01278 12 RADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS-FADK 90 (389)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhC-CCCE
Confidence 4588999999999999999999999999999999999999999999999974322 245777889999999887 5679
Q ss_pred EEEeCChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
++|++||++|++.|+++++.+ +++.+||+++++|||.+..+...++.......+. + ....+..++++
T Consensus 91 v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~ 163 (389)
T PRK01278 91 VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG-----P--LVPGFDQVPFG 163 (389)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC-----C--CCCCceEeCCC
Confidence 999999999999999998776 4567999999999999988887776533221110 0 01234457788
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~ 247 (411)
|++++++.++ +++++|++||+++++|...++++++++|+++|++||+++|+||+|+|| ++|..+..+++++.||++
T Consensus 164 d~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~ 240 (389)
T PRK01278 164 DIEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIM 240 (389)
T ss_pred CHHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEE
Confidence 9999999886 379999999999999988999999999999999999999999999999 888777777788999999
Q ss_pred hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 248 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 248 ~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
|+||++++|+|+||+++++++++.+.. ..+++|++.++++++++.++++.++++++.++++++.++++++|+++...
T Consensus 241 t~sK~l~~G~~ig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~ 317 (389)
T PRK01278 241 AVAKGIGGGFPLGACLATEEAAKGMTP---GTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDR 317 (389)
T ss_pred EEehhccCCcceEEEEEcHHHHhccCC---CCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998887763 34667899999999999999998877778899999999999999998766
Q ss_pred cC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHH
Q 015230 328 AG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAA 404 (411)
Q Consensus 328 ~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l 404 (411)
++ ....+++.|.++++++.. +..++++.|+++||++.|++.+.+|+ +++++++++++++++|
T Consensus 318 ~~~~~~~v~g~G~~~~i~~~~---------------~~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l 382 (389)
T PRK01278 318 FPDVIEEVRGKGLLLGLKCVV---------------PNRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERL 382 (389)
T ss_pred CCCceeeEecccEEEEEEEec---------------CHHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHH
Confidence 66 667788889999988732 12678999999999999987777887 4678999999999999
Q ss_pred HHHHHhC
Q 015230 405 EKVLRQI 411 (411)
Q Consensus 405 ~~~~~~~ 411 (411)
+++++++
T Consensus 383 ~~~l~~~ 389 (389)
T PRK01278 383 ERAAESL 389 (389)
T ss_pred HHHHHhC
Confidence 9998764
No 66
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-52 Score=397.58 Aligned_cols=375 Identities=21% Similarity=0.292 Sum_probs=301.7
Q ss_pred eEEEeecCcEEEec-CCCEEEeccCCccccccCCCcHHHHH--HHHHHHHcCC-----CCCCCCHHHHHHHHHHHhhC-C
Q 015230 20 IVFDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVLA--ALGETMKKGT-----SFGAPCLLENVLAEMVISAV-P 90 (411)
Q Consensus 20 ~~~~~~~g~~~~~~-~g~~~~d~~~~~~~~~~g~~~~~v~~--a~~~~l~~~~-----~~~~~~~~~~~l~~~l~~~~-~ 90 (411)
+.+.+++|+++||. ||++|+||.+++++.++||+||++.+ ++.+++++.. ...+..+...++++.|.+.. +
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p 107 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD 107 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC
Confidence 34799999999995 99999999999999999999999999 9999998632 12456778889999999887 4
Q ss_pred -CCCEEEEeCChHHHHHHHHHHHHhcc------------CCcEEEEEeCCcCCCchhhhhhcCCCCcc-cCCCCC--CCC
Q 015230 91 -SIEMVRFVNSGTEACMGVLRLARAFT------------GRERIIKFEGCYHGHADPFLVKAGSGVAT-LGLPDS--PGV 154 (411)
Q Consensus 91 -~~~~v~~~~~g~~a~~~al~~~~~~~------------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~--~~~ 154 (411)
+.++++|++||+||++.|+|+++.++ ++.+||.+.++|||.+..++..++..... ...+.. ..+
T Consensus 108 ~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK08297 108 PELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 187 (443)
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcccc
Confidence 57899999999999999999998762 24789999999999999999887643221 111110 001
Q ss_pred CCCC-C----C----ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 015230 155 PKGA-T----Y----ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 225 (411)
Q Consensus 155 ~~~~-~----~----~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~ 225 (411)
+... . . ....++.++++++++.+.++++++++||+||+++++|.+.++++|+++|+++|++||+++|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV 267 (443)
T PRK08297 188 DNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV 267 (443)
T ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 0000 0 0 01112223567778888877789999999999999999999999999999999999999999999
Q ss_pred cccc-ccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcC--CCCcccccCCCCCHHHHHHHHHHHHHHh
Q 015230 226 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLK 302 (411)
Q Consensus 226 ~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~--~~~~~~~~t~~~~~~~~a~~~~~l~~~~ 302 (411)
++|| |+|.+++.+++++.||+++++|++. +|.++..+++.+.... .....+++|++++|++++++.++++.++
T Consensus 268 ~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 343 (443)
T PRK08297 268 QTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE 343 (443)
T ss_pred hhccCccchHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999984 4444444443221110 0123477899999999999999999998
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC
Q 015230 303 EPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 381 (411)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~ 381 (411)
++++.++++++++++++.|+++..+++... ++++.|+++.+++.+ ......+.+.|.++||++.+.
T Consensus 344 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~Gvl~~~~ 410 (443)
T PRK08297 344 EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT-------------TADRDEVIRRLWEEGVLVLPC 410 (443)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC-------------HHHHHHHHHHHHHCCEEEecC
Confidence 899999999999999999999988888655 889999999999842 223467889999999999987
Q ss_pred CCcceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 382 QFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 382 ~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+.+.+++ ++++|++++++++++|++++.++
T Consensus 411 ~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 411 GERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6566665 89999999999999999998764
No 67
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=3.3e-52 Score=394.78 Aligned_cols=370 Identities=28% Similarity=0.396 Sum_probs=312.9
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... .+..+...++++.|.+.. +.++
T Consensus 21 ~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~ 99 (403)
T PRK05093 21 PAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-FAER 99 (403)
T ss_pred CCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-CCCE
Confidence 4588999999999999999999999999999999999999999999999874322 235666789999999887 5679
Q ss_pred EEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
++|++||++|++.|+++++.++ ++.++|.++.+|||.+..+..+.+..... .++.. ....+..++++
T Consensus 100 ~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~ 172 (403)
T PRK05093 100 VFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS------DGFGP-KPADITHVPFN 172 (403)
T ss_pred EEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh------hcCCC-CCCCcEEeCCC
Confidence 9999999999999999998773 67889999999999998777666542111 11111 12356788999
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~ 247 (411)
|++.+++.+. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|+ ++|.++..+.+++.||+.
T Consensus 173 d~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~ 249 (403)
T PRK05093 173 DLAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDIL 249 (403)
T ss_pred CHHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEE
Confidence 9999998886 468999999999999999899999999999999999999999999999 888766666778899999
Q ss_pred hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 248 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 248 ~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
+|||++++|+|+||+++++++++.+.. ..+..++++++++++++.++++.+..++++++++++.+++.+.|+++..+
T Consensus 250 s~sK~l~~G~rig~vv~~~~i~~~l~~---~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 326 (403)
T PRK05093 250 TSAKALGGGFPIGAMLTTAEIASHFKV---GTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQK 326 (403)
T ss_pred EecccccCCcceEEEEEcHHHHhhcCC---CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999888763 23556889999999999999998877888999999999999999998766
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~ 405 (411)
++....+++.|.++++++... ......++++.|.++||++.+.+.+.+|+ ++.++++++++++++|.
T Consensus 327 ~~~~~~~~~~G~~~~~~l~~~-----------~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 327 YGVFSEIRGMGLLIGAELKPQ-----------YKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred CCCeEeEeeCceEEEEEecCc-----------chhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 666667788899999988421 01234688999999999999877677887 68889999999999999
Q ss_pred HHHHhC
Q 015230 406 KVLRQI 411 (411)
Q Consensus 406 ~~~~~~ 411 (411)
+++.++
T Consensus 396 ~~l~~~ 401 (403)
T PRK05093 396 KAVAKV 401 (403)
T ss_pred HHHHHh
Confidence 988753
No 68
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=6.7e-52 Score=396.74 Aligned_cols=373 Identities=27% Similarity=0.411 Sum_probs=316.0
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.|+++.+++|.++||.||++|+||.+++++.++||+||++.+++.++++++... .+..+...++++.+++.+ +.+++
T Consensus 57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~~~~~ 135 (474)
T PLN02624 57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-GYDMV 135 (474)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-CCCeE
Confidence 488999999999999999999999999999999999999999999999985432 255777889999999988 46899
Q ss_pred EEeCChHHHHHHHHHHHHhcc--------CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC
Q 015230 96 RFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~--------~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (411)
+|++||+||++.||++++.++ ++..|+.+.++|||.+..++.+++.......+ .+. ...+..+++
T Consensus 136 ~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~--~~~-----~~~~~~~~~ 208 (474)
T PLN02624 136 LPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGF--GPL-----LPGHLKVDF 208 (474)
T ss_pred EEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccC--CCC-----CCCceEeCC
Confidence 999999999999999998752 23479999999999999998877653222111 011 123556788
Q ss_pred CCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcch
Q 015230 168 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246 (411)
Q Consensus 168 ~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~ 246 (411)
+|++.+++.++..++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|..+..++.++.||+
T Consensus 209 ~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDi 288 (474)
T PLN02624 209 GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDV 288 (474)
T ss_pred CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCE
Confidence 99999999998766789999999999999999999999999999999999999999999999 99988877788999999
Q ss_pred hhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 247 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 247 ~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
+++||++++| +|+|+++.++++++.+.+ ..+++|+++++++++++.++++.++++++.++..++.+++++.|+++.
T Consensus 289 v~lsK~lggG~~pigav~~~~~i~~~~~~---~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~ 365 (474)
T PLN02624 289 VILGKALGGGVIPVSAVLADKDVMLCIKP---GEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQ 365 (474)
T ss_pred EEecccccCCCCcceeeeecHHHHhHhcc---CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999976 899999999888887753 346778999999999999999998878899999999999999999987
Q ss_pred HhcC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHH
Q 015230 326 KKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 326 ~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~ 402 (411)
.+++ .+..+++.|.++.+++.... .....+..+++.|.++||++.+.+.+.+|+ ++.+|+++|+++++
T Consensus 366 ~~~~~~i~~vrg~G~~~~i~l~~~~---------~~~~~a~~~~~~L~e~GV~v~p~~~~~lR~~p~l~~t~e~id~~l~ 436 (474)
T PLN02624 366 KQFPKLIKEVRGRGLLNAVVLNSPK---------LGPVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECSK 436 (474)
T ss_pred HhCCCceEEEEeeEEEEEEEecCCC---------cChHHHHHHHHHHHhCCeEEecCCCCEEEEECCccCCHHHHHHHHH
Confidence 7777 45668889999998884321 012345678899999999999987677777 57999999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|++++..
T Consensus 437 ~L~~~l~~ 444 (474)
T PLN02624 437 ALSDVLEH 444 (474)
T ss_pred HHHHHHHH
Confidence 99988764
No 69
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-52 Score=427.67 Aligned_cols=384 Identities=24% Similarity=0.314 Sum_probs=314.3
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHhhCC-CCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVP-SIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~-~~~~~~~~l~~~l~~~~~-~~~~v 95 (411)
.|+++.+++|+++||.+|++|+||.+++ ..+||+||+|.+|+.+++.++...+ +..+...+++++|.+.++ +.+++
T Consensus 567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~~~~~~~~~elae~L~~~~p~~~~~v 644 (972)
T PRK06149 567 DPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSERLAALAPDGLDTV 644 (972)
T ss_pred CCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccccccCHHHHHHHHHHHHhCCCCcCEE
Confidence 4778999999999999999999999886 5799999999999999999854332 456778999999999997 58899
Q ss_pred EEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC-C-CCCCCCCCCCCCceeecCC--CC--
Q 015230 96 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-L-PDSPGVPKGATYETLTAPF--ND-- 169 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~~--~d-- 169 (411)
+|++||+||++.||++++.++++.+||+++.+|||++.++..+++....... . +...++......+.+..++ ++
T Consensus 645 ~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~ 724 (972)
T PRK06149 645 FLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSA 724 (972)
T ss_pred EEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccH
Confidence 9999999999999999999999999999999999999887665443110000 0 0001111111112222222 22
Q ss_pred ---HHHHHHHHH---cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-CccccccC
Q 015230 170 ---VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFG 241 (411)
Q Consensus 170 ---~~~l~~~~~---~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~~~ 241 (411)
.+++++.++ +.++++++||+||+++++|.+.++++|+++|+++|++||+++|+||||+|| |+|. +++++++|
T Consensus 725 ~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~g 804 (972)
T PRK06149 725 ADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQG 804 (972)
T ss_pred HHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcC
Confidence 344444443 245689999999999999999999999999999999999999999999999 9996 56888899
Q ss_pred CCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015230 242 VTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321 (411)
Q Consensus 242 ~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 321 (411)
+.|||+|+||++++|+|+|++++++++++.+... ..+++|+++||++|+++.++++.++++++.++.++++++++++|
T Consensus 805 v~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~--~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L 882 (972)
T PRK06149 805 VVPDIITMAKGMGNGHPLGAVITRREIAEALEAE--GYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARL 882 (972)
T ss_pred CCCCEEEecccccCCeeeEEEEEcHHHHhhhccC--CcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999888642 23456889999999999999999998999999999999999999
Q ss_pred HHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--ccee--eecCCCHHHH
Q 015230 322 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDDI 397 (411)
Q Consensus 322 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~--~~~~~t~~~i 397 (411)
+++..+++++.++++.|+++.+++...... +.+....+..+.+.|+++||++.+.+. +.++ +|+++|++++
T Consensus 883 ~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~-----~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~i 957 (972)
T PRK06149 883 EALADRHPLIGAVHGMGLYLGVELVRDRQT-----LEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESA 957 (972)
T ss_pred HHHHHhCCCeEEEeecceEEEEEEecCccc-----CCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHH
Confidence 999888999999999999999999643111 113334567899999999999998764 4455 4789999999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|++++++
T Consensus 958 d~~~~~l~~~l~~ 970 (972)
T PRK06149 958 DFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 70
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=6.9e-52 Score=391.67 Aligned_cols=362 Identities=25% Similarity=0.353 Sum_probs=304.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++++... ....+...++++++++..+ .++
T Consensus 21 ~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~ 99 (396)
T PRK04073 21 PLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLTG-KDM 99 (396)
T ss_pred CCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcCC-CCe
Confidence 3488999999999999999999999999999999999999999999999985322 2456777899999998774 579
Q ss_pred EEEeCChHHHHHHHHHHHHhc--------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 95 VRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~--------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
++|++||++|++.||++++.+ +++++||+++.+|||.+..++.+++........ ... ...+..++
T Consensus 100 ~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~ 172 (396)
T PRK04073 100 VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGF--GPM-----LPGIKKIP 172 (396)
T ss_pred EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCC--CCC-----CCCceEeC
Confidence 999999999999999999876 467889999999999998888777653222111 011 12345678
Q ss_pred CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc
Q 015230 167 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 167 ~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d 245 (411)
++|++++++.++ +++++|++||+++++|.+.++++|+++|.++|++||+++|+||+|+|| ++|..++.+..++.||
T Consensus 173 ~~d~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pd 249 (396)
T PRK04073 173 YGDLEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD 249 (396)
T ss_pred CCCHHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCC
Confidence 889999998885 468999999999999999999999999999999999999999999999 8887777677888999
Q ss_pred hhhhhhhccC-CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 246 ~~~~sK~~~~-G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
++++||++++ |+|+|++++++++++.+.. ..+.+|+++++++++++.++|+.++++++.++.+++++++.+.|+++
T Consensus 250 i~~~sK~lg~gg~~ig~~~~~~~i~~~~~~---~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 250 MYILGKALGGGVFPISCVAANRDILGVFTP---GSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred EEEecccccCCCCcceEEEEcHHHHhhhcC---CCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 9999999996 5999999999999988863 23567899999999999999998877889999999999999999886
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHH
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~ 402 (411)
. .+....+++.|+++++++.. .+..+.+.|.++||++.+.+.+.+|+ ++++|+++++++++
T Consensus 327 ~--~~~i~~~~~~g~~~~~~~~~---------------~~~~~~~~l~~~Gv~~~~~~~~~iRi~p~l~~t~e~i~~~~~ 389 (396)
T PRK04073 327 D--NPMIKEVRGRGLFIGVELNE---------------PARPYCEALKEEGLLCKETHETVIRFAPPLVITKEELDWAFE 389 (396)
T ss_pred c--CCcccceecceEEEEEEecc---------------hHHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHH
Confidence 2 24455667889998988732 13678899999999998866567777 47999999999999
Q ss_pred HHHHHHH
Q 015230 403 AAEKVLR 409 (411)
Q Consensus 403 ~l~~~~~ 409 (411)
+|+++++
T Consensus 390 ~l~~~l~ 396 (396)
T PRK04073 390 KIKAVLS 396 (396)
T ss_pred HHHHHhC
Confidence 9998763
No 71
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=4.1e-51 Score=386.68 Aligned_cols=377 Identities=22% Similarity=0.294 Sum_probs=308.9
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-CCCE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEM 94 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~~~~ 94 (411)
++.+.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.... ..+.+...++++++.+..+ +.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 107 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDC 107 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCE
Confidence 45689999999999999999999999999999999999999999999985321 2456778999999999987 5689
Q ss_pred EEEeCChHHHHHHHHHHHHhcc------CCcEEEEEeCCcCCCchhhhhhcCCCC-cccC-CCCCCCCCCCCCC-ceeec
Q 015230 95 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLG-LPDSPGVPKGATY-ETLTA 165 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~------~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~-~~~~~~~~~~~~~-~~~~~ 165 (411)
++|++||+||++.|+++++.++ ++.+||++.++|||.+..+..+++... .... .+........... .....
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 187 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDE 187 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccc
Confidence 9999999999999999998763 467899999999999988887766421 1100 0101111000000 00111
Q ss_pred --CCCCHHHHHHHHHcCCCcEEEEEEccc-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC
Q 015230 166 --PFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 241 (411)
Q Consensus 166 --~~~d~~~l~~~~~~~~~~~~~vi~~~~-~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~ 241 (411)
.++|++++++.+++.++++++|++||+ ++++|...++.+|+++|+++|++||+++|+||+|+|| ++|.++..++++
T Consensus 188 ~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~ 267 (427)
T TIGR00508 188 EWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAG 267 (427)
T ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcC
Confidence 223678888888876678999999997 8889999999999999999999999999999999999 999888888899
Q ss_pred CCcchhhhhhhccCC-cccccccccHHHHHHhcCC--CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015230 242 VTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 318 (411)
Q Consensus 242 ~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~--~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (411)
+.||++++||+++|| +|++.+++++++.+.+... ....+++|+.++|++++++.++++.+++++++++++++.++++
T Consensus 268 v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 268 VVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLK 347 (427)
T ss_pred CCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999 4899999999998888642 1234677999999999999999999988889999999999999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHH
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 396 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~ 396 (411)
+.|+++.. ++....+++.|+++.+++.+. .....+.+.|.++||++.+.+ +.+++ ++.+|++|
T Consensus 348 ~~L~~l~~-~~~i~~vrg~G~~~~i~~~~~-------------~~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~ 412 (427)
T TIGR00508 348 RELSPLRK-NPVVKDVRVLGAIGVVEMYKP-------------VNVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQ 412 (427)
T ss_pred HHHHHhhc-CCCEEeEeccccEEEEEECCc-------------cCHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHH
Confidence 99999853 555667889999999999432 113578899999999998765 34555 68899999
Q ss_pred HHHHHHHHHHHHHh
Q 015230 397 IQHTITAAEKVLRQ 410 (411)
Q Consensus 397 i~~~i~~l~~~~~~ 410 (411)
||+++++|++++++
T Consensus 413 id~~~~~l~~~l~~ 426 (427)
T TIGR00508 413 LQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999875
No 72
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-50 Score=381.32 Aligned_cols=363 Identities=29% Similarity=0.407 Sum_probs=307.7
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+.+.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++... ..+..+.+.++++++.+..+ .+.
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~ 88 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA-GDL 88 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC-CCE
Confidence 357889999999999999999999999999899999999999999999987422 22457888999999988764 568
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
++|++||++|++.|+++++.++++++|++++++|||.+...+..++....... +.. ....+..++++|+++++
T Consensus 89 ~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~~d~~~l~ 161 (377)
T PRK02936 89 VFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEG------FGP-LLPGFTHVPFNDIKALK 161 (377)
T ss_pred EEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCcccccc------CCC-CCCCceEeCCCCHHHHH
Confidence 99999999999999999888888899999999999999888776654222111 100 11235567888999999
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhc
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKII 253 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~ 253 (411)
+.+. +++++|++||+++++|.+.++++++++|+++|++||+++|+||+|+|| ++|..+..+++++.||++++||++
T Consensus 162 ~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l 238 (377)
T PRK02936 162 EVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGL 238 (377)
T ss_pred Hhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEcccc
Confidence 8886 468999999999999999889999999999999999999999999999 888766666778899999999999
Q ss_pred cCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceE
Q 015230 254 GGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 333 (411)
Q Consensus 254 ~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 333 (411)
++|+|+||+++++++.+.+.. ..+.+++++++++++++.++++.+..++++++++++.+++++.|+++..+++....
T Consensus 239 ~~G~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 315 (377)
T PRK02936 239 GNGIPVGAMIGKKELGTAFGP---GSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKN 315 (377)
T ss_pred cCCCccEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 999999999999999888863 23556889999999999999998866788999999999999999987656676666
Q ss_pred EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHHHHHHHH
Q 015230 334 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~~l~~~~ 408 (411)
+++.|+++++++.+. ...+.+.|.++||++.+.+.+.+|+. +.++++++++++++|++++
T Consensus 316 v~~~g~~~~i~~~~~---------------~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 316 IRGKGLMIGIECTEE---------------VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EeecceEEEEEecch---------------HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 778899999988421 36788999999999999877778874 7899999999999998764
No 73
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.5e-50 Score=383.82 Aligned_cols=364 Identities=28% Similarity=0.409 Sum_probs=308.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCCC--CC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS--IE 93 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~~--~~ 93 (411)
.|+++.+++|+++||.||++|+||.++++++++||+||++.+++.+++++... ..+......++++++++.++. .+
T Consensus 25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 104 (398)
T PRK03244 25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGG 104 (398)
T ss_pred CCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 57899999999999999999999999999999999999999999999998422 235667778999999998862 47
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHH
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 173 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 173 (411)
++++++||++|++.++++++. .++.++|.++++|||.+..+....+........ .. ...++..++++|++++
T Consensus 105 ~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~d~~~l 176 (398)
T PRK03244 105 RVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF---EP----LPGGVEHVPYGDVDAL 176 (398)
T ss_pred EEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCC---CC----CCCCceEeCCCCHHHH
Confidence 999999999999999998866 567789999999999998887776643221111 00 1234566788899999
Q ss_pred HHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhh
Q 015230 174 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 252 (411)
Q Consensus 174 ~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~ 252 (411)
++.++ +++++|++||+++++|.+.++++|+++|.++|++||+++|+||+|+|| ++|.++++++.++.||+++|||+
T Consensus 177 ~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~ 253 (398)
T PRK03244 177 AAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKG 253 (398)
T ss_pred HHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchh
Confidence 98885 478999999999999999999999999999999999999999999999 88877677778899999999999
Q ss_pred ccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 253 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 253 ~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
+++|+|+|++++++++++.+.. ..+.++++.++++++++.++++.++++++.++++++.+++++.|+++. ++...
T Consensus 254 l~~G~~ig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~~ 328 (398)
T PRK03244 254 LGGGLPIGACLAFGPAADLLTP---GLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALG--HPLVD 328 (398)
T ss_pred hhCCcccEEEEEcHHHHhhccC---CCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcC--CCcee
Confidence 9999999999999998887763 346678999999999999999988878899999999999999998862 45556
Q ss_pred EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 333 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 333 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+++.|+++++++... .+..+.+.|.++||++.+...+.+|+ ++.+|++|+++++++|++++.+
T Consensus 329 ~v~g~g~~~~i~~~~~--------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 329 HVRGRGLLLGIVLTAP--------------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred eEeeccEEEEEEEecc--------------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 7788899999998421 23678999999999999876677776 4778999999999999999876
Q ss_pred C
Q 015230 411 I 411 (411)
Q Consensus 411 ~ 411 (411)
+
T Consensus 395 ~ 395 (398)
T PRK03244 395 A 395 (398)
T ss_pred c
Confidence 3
No 74
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=5.1e-51 Score=386.95 Aligned_cols=374 Identities=21% Similarity=0.285 Sum_probs=295.9
Q ss_pred CCCCeE--EEeecCcEEEec-CCCEEEeccCCccccccCCCcHHHH--HHHHHHHHcCC----C-CCCCCHHHHHHHHHH
Q 015230 16 GGQPIV--FDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVL--AALGETMKKGT----S-FGAPCLLENVLAEMV 85 (411)
Q Consensus 16 ~~~~~~--~~~~~g~~~~~~-~g~~~~d~~~~~~~~~~g~~~~~v~--~a~~~~l~~~~----~-~~~~~~~~~~l~~~l 85 (411)
...|+. +.+++|+++||. ||++|+||.+++++.++||+||++. +++.+++++.. . ..+......+++++|
T Consensus 15 ~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l 94 (431)
T TIGR03251 15 DGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTF 94 (431)
T ss_pred cCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHH
Confidence 345665 499999999996 9999999999999999999999999 99999998742 1 134567778888888
Q ss_pred HhhC-C-CCCEEEEeCChHHHHHHHHHHHHhccC------------CcEEEEEeCCcCCCchhhhhhcCCCCcc-cCCCC
Q 015230 86 ISAV-P-SIEMVRFVNSGTEACMGVLRLARAFTG------------RERIIKFEGCYHGHADPFLVKAGSGVAT-LGLPD 150 (411)
Q Consensus 86 ~~~~-~-~~~~v~~~~~g~~a~~~al~~~~~~~~------------~~~vi~~~~~~~~~~~~~~~~~g~~~~~-~~~~~ 150 (411)
.+.. + +.++++|++||+||++.||++++.+++ +.+||.+.++|||.+..++..++..... ...+.
T Consensus 95 ~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~ 174 (431)
T TIGR03251 95 ARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPK 174 (431)
T ss_pred HHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCC
Confidence 8875 3 678999999999999999999988752 4689999999999999998887753222 11111
Q ss_pred CCC--C--CCCC-C--C----ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 015230 151 SPG--V--PKGA-T--Y----ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 219 (411)
Q Consensus 151 ~~~--~--~~~~-~--~----~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~ 219 (411)
... + +... + . .....+.++++++++.+.++++++++|++||+++++|.+.++++|+++|+++|++||++
T Consensus 175 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~l 254 (431)
T TIGR03251 175 FDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDAL 254 (431)
T ss_pred CCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 100 0 0000 0 0 01111223566777788777789999999999999999999999999999999999999
Q ss_pred EEEecccccc-ccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhc--CCCCcccccCCCCCHHHHHHHHH
Q 015230 220 LIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIH 296 (411)
Q Consensus 220 li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~--~~~~~~~~~t~~~~~~~~a~~~~ 296 (411)
+|+||+|+|| ++|.+++.+++++.||+++++|++. ++.++..+++.+... ......+++|++++|++++++.+
T Consensus 255 lI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~~----~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a 330 (431)
T TIGR03251 255 LIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ----VCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATR 330 (431)
T ss_pred EEEecchhccCccchHHHHHhcCCCCCEEEecccCc----cceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHH
Confidence 9999999999 9999999999999999999999973 434434333222111 01122467799999999999999
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC
Q 015230 297 TLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 375 (411)
Q Consensus 297 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 375 (411)
+++.++++++.++++++.+++++.|+++..+++ .+.++++.|+++.+++.+ ......+.+.|+++|
T Consensus 331 ~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~G 397 (431)
T TIGR03251 331 ILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS-------------TADRDEVIRQLYREG 397 (431)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC-------------HHHHHHHHHHHHhCC
Confidence 999998888999999999999999999877777 778889999999999832 223467889999999
Q ss_pred eEeccCCCccee--eecCCCHHHHHHHHHHHHH
Q 015230 376 VYFAPSQFEAGF--TSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 376 i~v~~~~~~~~~--~~~~~t~~~i~~~i~~l~~ 406 (411)
|++.+.+.+.+| +++++|++|+++++++|++
T Consensus 398 vl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 398 VLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred eEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 999887656666 4799999999999999976
No 75
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=6.7e-50 Score=380.40 Aligned_cols=381 Identities=28% Similarity=0.438 Sum_probs=312.2
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC-C-C
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-I 92 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~-~-~ 92 (411)
.|+++.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.... ........++++++.+..+ + .
T Consensus 23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~ 102 (425)
T PRK08088 23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFA 102 (425)
T ss_pred CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 488999999999999999999999999999999999999999999999985322 1235667899999999876 3 3
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC-cccCCC-CCCCCCCCCCCceeecCCC--
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLP-DSPGVPKGATYETLTAPFN-- 168 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~-- 168 (411)
++++|++||++|++.||++++.++++.+||++.++|||.+..+...++... ...... ...++.. ..+..+.+
T Consensus 103 ~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~ 178 (425)
T PRK08088 103 KKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYR----ALYPCPLHGV 178 (425)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEE----cCCCccccCc
Confidence 699999999999999999999999999999999999999988887765311 111110 0011100 00001111
Q ss_pred ----CHHHHHHHHH--cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC
Q 015230 169 ----DVSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 241 (411)
Q Consensus 169 ----d~~~l~~~~~--~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~ 241 (411)
+++++++.++ ..++++++|++||+++++|.+.++++++++|.++|++||+++|+||+|+|+ ++|.++..+..+
T Consensus 179 ~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~ 258 (425)
T PRK08088 179 SEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMG 258 (425)
T ss_pred cHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcC
Confidence 1567888886 335789999999999999999999999999999999999999999999999 888777777788
Q ss_pred CCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHH
Q 015230 242 VTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321 (411)
Q Consensus 242 ~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 321 (411)
+.||+.||||++++|+|+||+++++++++.+.. ..+.+|+.+++++++++.+.++.++.+++.+++++..+++++.|
T Consensus 259 ~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 335 (425)
T PRK08088 259 VAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAP---GGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335 (425)
T ss_pred CCCCEEEEeccccCCCcceeeEecHHHHhhcCC---CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998864 33567999999999999999999877899999999999999999
Q ss_pred HHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceee--ecCCCHHHH
Q 015230 322 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDI 397 (411)
Q Consensus 322 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~--~~~~t~~~i 397 (411)
+++..+++....+++.|+++|+.+.+... ...++......+.+.+.++||++.+++ .+.+|+ ++.+|+++|
T Consensus 336 ~~l~~~~~~~~~v~g~G~~~~l~l~~~~~-----~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei 410 (425)
T PRK08088 336 LAIAEKHPEIGDVRGLGAMIAIELFEDGD-----HSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQI 410 (425)
T ss_pred HHHHHhCCCeEEEeccceEEEEEEecCCC-----CCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHH
Confidence 99988888777888889999999954321 111344567889999999999887754 245676 456899999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|++++..
T Consensus 411 ~~~i~~l~~~l~~ 423 (425)
T PRK08088 411 RQGLEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 76
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1e-51 Score=379.88 Aligned_cols=316 Identities=36% Similarity=0.597 Sum_probs=273.7
Q ss_pred EEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCCCHHHHHHHHHHHhhCC-CCCEEE
Q 015230 21 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVR 96 (411)
Q Consensus 21 ~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~~~~~~~l~~~l~~~~~-~~~~v~ 96 (411)
++.+++|+++||.||++|+||.+++++.++||+||++.+++.++++.... ..+..+...+++++|.+..| +.++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 47899999999999999999999999999999999999999999998643 34568888999999999997 789999
Q ss_pred EeCChHHHHHHHHHHHH------hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCH
Q 015230 97 FVNSGTEACMGVLRLAR------AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 170 (411)
Q Consensus 97 ~~~~g~~a~~~al~~~~------~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 170 (411)
|++||+||++.||++++ ..+++.+|+++.++|||.+..++.+++.+....... + ....+..+|++++
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~--~-----~~~~~~~~p~~~~ 153 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFG--P-----LYPGVVFVPFPDP 153 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTC--S-----SSTTEEEEETTCH
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCcccccccc--c-----cccccccccCCcc
Confidence 99999999999999999 778999999999999999999988876644432211 1 1123466777776
Q ss_pred HH----------HHHHHH-cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccc
Q 015230 171 SA----------LENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 238 (411)
Q Consensus 171 ~~----------l~~~~~-~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~ 238 (411)
.. +++.+. ...+++++||+||+++++|.+.++++|+++|+++|++||+++|+||+++|| |+|.+++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~ 233 (339)
T PF00202_consen 154 AADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASE 233 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHH
T ss_pred chhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcccee
Confidence 55 333333 235689999999999999999999999999999999999999999999999 999999999
Q ss_pred ccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Q 015230 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 318 (411)
Q Consensus 239 ~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~ 318 (411)
++++.||++|+||++++|+|+|.+++++++.+.+... .+++|+.++|++|+++.+.++.++++++.+++++.+++++
T Consensus 234 ~~gv~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~---~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~ 310 (339)
T PF00202_consen 234 HYGVDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPG---SHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLR 310 (339)
T ss_dssp HHTSSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTT---SSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cccccCcccccccchhhhhhcccccccchhhcccccc---ccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888643 3788999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
++|+++..+++.+..+++.|+++.+++.
T Consensus 311 ~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 311 EGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 9999999888999999999999999984
No 77
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=1.2e-49 Score=380.46 Aligned_cols=379 Identities=36% Similarity=0.546 Sum_probs=316.5
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCC---CCHHHHHHHHHHHhhCC-CC
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~---~~~~~~~l~~~l~~~~~-~~ 92 (411)
..|+++.+++|+++||.||++|+||.++++..++||+||++++++.+++..+..+.. ..+...++++.+++.++ +.
T Consensus 17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 96 (413)
T cd00610 17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYNEPAVELAELLLALTPEGL 96 (413)
T ss_pred CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCCHHHHHHHHHHHHhCCCCC
Confidence 468899999999999999999999999988899999999999999999987544432 47889999999999997 78
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC----
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN---- 168 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 168 (411)
+++++++||++|++.++++++.++++++|++++++||+.........+..... +.......++..++++
T Consensus 97 ~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 169 (413)
T cd00610 97 DKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYR-------GGFGPLLPGVLHVPYPYRYR 169 (413)
T ss_pred CEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCcccc-------ccCCCCCCCcEEeCCCcccc
Confidence 99999999999999999998888889999999999999998887776542111 1111122345667776
Q ss_pred -------CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccccc
Q 015230 169 -------DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 240 (411)
Q Consensus 169 -------d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~ 240 (411)
|++.+++.++++++++++++++|+++++|.+.++++|+++|.++|++||+++|+||+|+|| +.|..+..+.+
T Consensus 170 ~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~ 249 (413)
T cd00610 170 PPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHF 249 (413)
T ss_pred chhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhc
Confidence 8899999998765689999999999999999999999999999999999999999999999 88876677778
Q ss_pred CCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q 015230 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 320 (411)
Q Consensus 241 ~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
++.||++++||++++|+|+||+++++++++.+. .....+.+|++.++++++++.++++.++.+++.++++++.+++++.
T Consensus 250 ~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~ 328 (413)
T cd00610 250 GVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFP-AGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRER 328 (413)
T ss_pred CCCCCeEEEcccccCccccEEEEEcHHHHHhhc-cCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999988861 1234456789999999999999999887788999999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQ 398 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~ 398 (411)
|+++...++....+++.|.++++.+.+..... .++......+.+.|.++||++.+++.+.+|+ ++.+|+++++
T Consensus 329 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~~~~~~~t~~~i~ 403 (413)
T cd00610 329 LRELAEKHPLVGDVRGRGLMIGIELVKDRATK-----PPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEID 403 (413)
T ss_pred HHHHHhhCCcEEEeecCceEEEEEEecCCCcC-----CcchHHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHH
Confidence 99886655666666778999999886432110 1223456789999999999999986556666 6788999999
Q ss_pred HHHHHHHHHH
Q 015230 399 HTITAAEKVL 408 (411)
Q Consensus 399 ~~i~~l~~~~ 408 (411)
+++++|++++
T Consensus 404 ~~~~~l~~~l 413 (413)
T cd00610 404 EGLDALDEAL 413 (413)
T ss_pred HHHHHHHHhC
Confidence 9999998764
No 78
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2.2e-49 Score=393.43 Aligned_cols=397 Identities=20% Similarity=0.253 Sum_probs=308.8
Q ss_pred ccCcccccccCCC-CCeEEEeecCc----EEEecCCC----EEEeccCCccccccCC-CcHHHHHHHHHHHHcCCCC---
Q 015230 5 VNSPVRAFKSVGG-QPIVFDSVKGS----HMWDIDGN----EYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSF--- 71 (411)
Q Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~g~----~~~~~~g~----~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~~--- 71 (411)
+|++.-.+..... .+.++.++.|. +++|.+|+ +|+|++++||+..+|| +||++.+|+.+++.+..+.
T Consensus 325 iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~ 404 (817)
T PLN02974 325 LWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFP 404 (817)
T ss_pred ccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccC
Confidence 5665555544432 47888999998 99999998 9999999999999994 8999999999999996432
Q ss_pred CCCCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHh-cc------------------CCcEEEEEeCCcCC
Q 015230 72 GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARA-FT------------------GRERIIKFEGCYHG 130 (411)
Q Consensus 72 ~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~-~~------------------~~~~vi~~~~~~~~ 130 (411)
.+.++...+++++|.+..+ + .++|+|++||++|+|.|||+++. +. ++.+||.+.++|||
T Consensus 405 ~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG 484 (817)
T PLN02974 405 ENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHG 484 (817)
T ss_pred ccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCC
Confidence 3468889999999999665 3 68999999999999999999953 41 36689999999999
Q ss_pred CchhhhhhcCCCCcccCC--CC----CCCCCCCC-----CCceeecCCC-------------------------------
Q 015230 131 HADPFLVKAGSGVATLGL--PD----SPGVPKGA-----TYETLTAPFN------------------------------- 168 (411)
Q Consensus 131 ~~~~~~~~~g~~~~~~~~--~~----~~~~~~~~-----~~~~~~~~~~------------------------------- 168 (411)
.+.+++.+++.......+ +. ...++... +.....++.+
T Consensus 485 ~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~ 564 (817)
T PLN02974 485 DTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKA 564 (817)
T ss_pred CCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchhhhHH
Confidence 999999987643221110 10 00000000 0000000000
Q ss_pred CHHHHHHHHHc-----CCCcEEEEEEccc-CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC
Q 015230 169 DVSALENLFEN-----NKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 241 (411)
Q Consensus 169 d~~~l~~~~~~-----~~~~~~~vi~~~~-~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~ 241 (411)
..+.+++.+++ .++++++||+||+ ++.+|++.++++|+++|+++|++||+++|+|||++|| |+|.+++.+++|
T Consensus 565 ~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~g 644 (817)
T PLN02974 565 YRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLG 644 (817)
T ss_pred HHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcC
Confidence 02556777753 3468999999995 8999999999999999999999999999999999999 999999999999
Q ss_pred CCcchhhhhhhccCC-cccccccccHHHHHHhcCC---CCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHH---
Q 015230 242 VTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT--- 314 (411)
Q Consensus 242 ~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~---~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~--- 314 (411)
+.|||+|++|+++|| +|+|.+++++++.+.+... ....+++|++++|++|+++.+.|+.++++++.+++.++.
T Consensus 645 v~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l 724 (817)
T PLN02974 645 CKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRL 724 (817)
T ss_pred CCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 999999999999999 6999999999999988521 245688999999999999999999998875555544444
Q ss_pred -HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCC-CcchhcccchHHHHHHHHHHH-HcCeEeccCCCcceee--e
Q 015230 315 -GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY-NFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEAGFT--S 389 (411)
Q Consensus 315 -~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~--~ 389 (411)
.++.+.|.+....++.+.++++.|+++.+++.++... .+ ....+..+.+.++ ++|+++++.+ +.+++ |
T Consensus 725 ~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~------~~~~a~~v~~~~~~~~Gl~~r~~G-nvi~l~pP 797 (817)
T PLN02974 725 RELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGY------SSLYARSVVRRLRREDGIYARPLG-NVVYLMCG 797 (817)
T ss_pred HHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCccccc------chHHHHHHHHHHHHhCCEEEEecC-CEEEEeCC
Confidence 5555666443456788999999999999999753211 11 1234567888888 9999999875 45554 7
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q 015230 390 LAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 390 ~~~t~~~i~~~i~~l~~~~ 408 (411)
+.++++++++++++|.+.+
T Consensus 798 ~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 798 PTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred CCCCHHHHHHHHHHHHHHh
Confidence 8999999999999999876
No 79
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=7e-49 Score=372.83 Aligned_cols=366 Identities=28% Similarity=0.439 Sum_probs=309.4
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|+++||.||++|+||.++++++++||+||++.+++.+++++.. ...++.+.+.++++++++.. +.++
T Consensus 20 ~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~ 98 (396)
T PRK02627 20 RLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELS-GMDK 98 (396)
T ss_pred CCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhc-CCCE
Confidence 35889999999999999999999999999999999999999999999998742 22356888999999999886 6689
Q ss_pred EEEeCChHHHHHHHHHHHHhccCC-----cEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGR-----ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 169 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~-----~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 169 (411)
+++++||++|++.++++++.+.++ ++++++.++|||.........+......... .. ...+..++++|
T Consensus 99 v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~d 171 (396)
T PRK02627 99 VFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFE---PL----VEGFIYVPFND 171 (396)
T ss_pred EEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCC---CC----CCCceEeCCCC
Confidence 999999999999999988777655 7899999999999888777766532221110 00 12345567889
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhh
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 248 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~ 248 (411)
++++++.+. +++++|+++|+++++|...++++++++|.++|++||+++|+||+|+|| ++|..+..+..++.||+++
T Consensus 172 ~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t 248 (396)
T PRK02627 172 IEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMT 248 (396)
T ss_pred HHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEE
Confidence 999999885 478999999999999988888999999999999999999999999999 8887666677788999999
Q ss_pred hhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 249 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 249 ~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
|||++++|+|+||+++++++++.+.. ..+..+++.++++++++.++++.++.+++.++++++.+++++.|+++...+
T Consensus 249 ~sK~~~~G~rig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (396)
T PRK02627 249 LAKGLGGGVPIGAVLAKEKVADVFTP---GDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKY 325 (396)
T ss_pred EcchhhCCcccEEEEEcHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999998887763 235568899999999999999988778889999999999999999987666
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
+....+++.|+++++++.. +..++.+.|.++||++.+++.+.+|+ ++.++++++++++++|++
T Consensus 326 ~~~~~~~~~g~~~~i~~~~---------------~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 390 (396)
T PRK02627 326 PGIKEVRGLGLMIGIELDR---------------PAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEE 390 (396)
T ss_pred CCeeeeccCcEEEEEEecC---------------cHHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 6666677789999998721 13688999999999999987677787 468899999999999999
Q ss_pred HHHhC
Q 015230 407 VLRQI 411 (411)
Q Consensus 407 ~~~~~ 411 (411)
+++++
T Consensus 391 ~l~~~ 395 (396)
T PRK02627 391 VLKEL 395 (396)
T ss_pred HHHhh
Confidence 98763
No 80
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=2.5e-50 Score=338.20 Aligned_cols=386 Identities=21% Similarity=0.318 Sum_probs=318.0
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.+|+.+.+++|.+++|++|++|+|+++|. .--||+||++.+|...++.... ...+......+.++.|...+|+.+.+
T Consensus 28 sDP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~tN~RFlhd~lv~cA~~l~stlPeLsvc 105 (452)
T KOG1403|consen 28 SDPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATISTNNRFLHDELVQCARTLTSTLPELSVC 105 (452)
T ss_pred CCchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHhhcCCCceEE
Confidence 36999999999999999999999999997 7789999999999999998853 33455666688899999999999999
Q ss_pred EEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC-CCCCCCCceeecCCC------
Q 015230 96 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG-VPKGATYETLTAPFN------ 168 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------ 168 (411)
+|+|||+||+++||+++|.++++.++|+.+.+|||+....+..+...+..-.....+. +.--+.+++++-.+.
T Consensus 106 ~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~ 185 (452)
T KOG1403|consen 106 FFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPD 185 (452)
T ss_pred EEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCc
Confidence 9999999999999999999999999999999999999887776543211100000000 000112223322221
Q ss_pred -C-----HHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Cccc
Q 015230 169 -D-----VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQ 237 (411)
Q Consensus 169 -d-----~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~ 237 (411)
| .+.+++.+.. ....+++++.|+.++.||.+.||.+|++.+++..|.+|.+.|.||+|.|| |.|. .+++
T Consensus 186 a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWaf 265 (452)
T KOG1403|consen 186 ADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAF 265 (452)
T ss_pred ccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhh
Confidence 1 3445555543 23568899999999999999999999999999999999999999999999 9985 4567
Q ss_pred cccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 015230 238 EYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGEL 317 (411)
Q Consensus 238 ~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~ 317 (411)
+.+++.|||+|++|.+++|.|++.++.++++.+.+...... .++|+++||++||++++.++..++++++++.++.+.++
T Consensus 266 q~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~-YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L 344 (452)
T KOG1403|consen 266 QTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVE-YFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKL 344 (452)
T ss_pred hhhccccchheecccCCCCCeeeEEeccHHHHHHhccccce-ehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999753333 34699999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCCcce----eeecCC
Q 015230 318 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEAG----FTSLAH 392 (411)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~----~~~~~~ 392 (411)
...|+++..+++.+.+++|.|+|+.+++.++.. .++|+...+..+...|++. +|+++..+++.. -+|.+.
T Consensus 345 ~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~-----tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCF 419 (452)
T KOG1403|consen 345 EVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK-----TRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCF 419 (452)
T ss_pred HHHHHHHhhhccceeccccceEEEeeeeecccc-----cCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCccc
Confidence 999999999999999999999999999976532 2347777888888888887 799998876553 338999
Q ss_pred CHHHHHHHHHHHHHHHHh
Q 015230 393 SSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 393 t~~~i~~~i~~l~~~~~~ 410 (411)
++++.++++..|+++|.-
T Consensus 420 neena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 420 NEENADEFVLGLDEILTV 437 (452)
T ss_pred ChhhHHHHHHHHHHHHHH
Confidence 999999999999988763
No 81
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=4.3e-48 Score=366.63 Aligned_cols=368 Identities=24% Similarity=0.356 Sum_probs=306.3
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.|+.+.+++|++++|.||++|+||.+++++..+||+||++.+++.++++..... .+..+...++++.+++.++ .+++
T Consensus 19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~ 97 (401)
T TIGR01885 19 LPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLFG-YDKV 97 (401)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhcC-CCEE
Confidence 377889999999999999999999999999999999999999999999874322 1356778899999998884 6799
Q ss_pred EEeCChHHHHHHHHHHHHhc--------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC
Q 015230 96 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~--------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (411)
++++||++|++.|+++++.+ +++..|+.+..+|||.+..++..++....... .... ...+..++|
T Consensus 98 ~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~ 170 (401)
T TIGR01885 98 LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTN---FGPY----VPGFKKIPY 170 (401)
T ss_pred EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccc---cCCC----CCCceEeCC
Confidence 99999999999999998765 34678999999999998888777664221110 1100 123567889
Q ss_pred CCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcch
Q 015230 168 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246 (411)
Q Consensus 168 ~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~ 246 (411)
+|++++++.+++.++++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|+ ++|..+..+..++.||+
T Consensus 171 ~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di 250 (401)
T TIGR01885 171 NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDI 250 (401)
T ss_pred CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCE
Confidence 99999999998655678999999999999999999999999999999999999999999999 88877666667888999
Q ss_pred hhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 247 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 247 ~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
+++||++++| +|+|++++++++++.+.. ..+..++++++++++++.++++.++++++.++.+++.+++++.|+++.
T Consensus 251 ~~~gK~l~~g~~~ig~v~~~~~i~~~~~~---~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~ 327 (401)
T TIGR01885 251 VLLGKALSGGVYPVSAVLADDDVMLTIKP---GEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP 327 (401)
T ss_pred EEeeccccCCCCCcEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc
Confidence 9999999965 899999999999888763 234568889999999999999999877888999999999999999873
Q ss_pred HhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHH
Q 015230 326 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITA 403 (411)
Q Consensus 326 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~ 403 (411)
.+.+..+++.|.+..+.+.... ....+.++.+.|.++||++.+.+.+.+|+ ++.+|+++|++++++
T Consensus 328 --~~~~~~~~g~g~~~~i~~~~~~----------~~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~ 395 (401)
T TIGR01885 328 --KPIITEVRGRGLLNAIVIDESK----------TGRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEI 395 (401)
T ss_pred --CCceeEEeecCeeEEEEeccCc----------chhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHH
Confidence 3555567788999998884321 01245789999999999999887677777 578999999999999
Q ss_pred HHHHH
Q 015230 404 AEKVL 408 (411)
Q Consensus 404 l~~~~ 408 (411)
|++++
T Consensus 396 l~~~l 400 (401)
T TIGR01885 396 IKKVI 400 (401)
T ss_pred HHHHh
Confidence 99876
No 82
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=5.7e-48 Score=366.73 Aligned_cols=371 Identities=25% Similarity=0.374 Sum_probs=304.8
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC--CCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~--~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
+.|+++.+++|+++||.||++|+||.+++++.++||+||++++++.++++...... +..+..+.+.+.+.+.. +.++
T Consensus 12 ~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 90 (400)
T PTZ00125 12 PLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF-GYDK 90 (400)
T ss_pred CCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC-CCCE
Confidence 35788999999999999999999999999999999999999999999998743221 23556666777776655 5689
Q ss_pred EEEeCChHHHHHHHHHHHHhc--------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 95 VRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~--------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
++|++||++|++.||++++.+ .++.+|++++.+|||.+...+...+........ ... ......++
T Consensus 91 ~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~ 163 (400)
T PTZ00125 91 VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF---GPF----VPGFELVD 163 (400)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC---CCC----CCCceEeC
Confidence 999999999999999988643 145789999999999998887776542211111 000 11345667
Q ss_pred CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc
Q 015230 167 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 167 ~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d 245 (411)
++|++++++.++ .+++++|++||+++++|.+.++++|+++|.++|++||+++|+||+|+|+ ++|..+..+.+++.||
T Consensus 164 ~~d~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd 241 (400)
T PTZ00125 164 YNDVEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPD 241 (400)
T ss_pred CCCHHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCC
Confidence 889999999986 3479999999999999999999999999999999999999999999999 8887666667888999
Q ss_pred hhhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 246 ~~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
++++||++++| +|+|++++++++++.+... ....+++.++++++++.++++.+.++++.++.+++.+++++.|+++
T Consensus 242 ~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~---~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l 318 (400)
T PTZ00125 242 IVLLGKALSGGLYPISAVLANDDVMLVIKPG---EHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKEL 318 (400)
T ss_pred EEEEcccccCCCcCcEEEEEcHHHHhhccCC---CCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999977 5999999999999887632 2456889999999999999998877788899999999999999988
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHH
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTIT 402 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~ 402 (411)
...++....+++.|.++++.+... +......+.+.|.++||++.|++.+.+|+. +.+++++++++++
T Consensus 319 ~~~~~~~~~~~~~g~~~~v~~~~~-----------~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~ 387 (400)
T PTZ00125 319 LKKSPWVKEIRGKGLLNAIVFDHS-----------DGVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALE 387 (400)
T ss_pred HhcCCCeEEEecccEEEEEEEccC-----------cchHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHH
Confidence 655666666778899999988431 123456788999999999999877778884 7799999999999
Q ss_pred HHHHHHHhC
Q 015230 403 AAEKVLRQI 411 (411)
Q Consensus 403 ~l~~~~~~~ 411 (411)
+|.++++++
T Consensus 388 ~l~~~l~~~ 396 (400)
T PTZ00125 388 IIKKVLKSF 396 (400)
T ss_pred HHHHHHHHH
Confidence 999988763
No 83
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.4e-47 Score=363.83 Aligned_cols=364 Identities=24% Similarity=0.336 Sum_probs=300.7
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.|+.+.+++|+++||.||++|+||.+++++.++||+||++.+++.+++++.... ....+...++++.+++..+ .+++
T Consensus 23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~ 101 (401)
T PRK00854 23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTG-SHKV 101 (401)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC-CCEE
Confidence 477899999999999999999999999999999999999999999999985322 2456778889999998875 5799
Q ss_pred EEeCChHHHHHHHHHHHHhc--------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC
Q 015230 96 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~--------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (411)
++++||++|++.||++++.+ +++++||++..+|||.+..+..+++.+..... +. ....++..+++
T Consensus 102 ~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~ 174 (401)
T PRK00854 102 LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGG------FG-PFTPGFRVVPF 174 (401)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccccc------CC-CCCCCeEEeCC
Confidence 99999999999999998765 24578999999999998877665544221110 10 01234567889
Q ss_pred CCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcch
Q 015230 168 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246 (411)
Q Consensus 168 ~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~ 246 (411)
+|++++++.+. +++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|+ ++|..+..++.++.||+
T Consensus 175 ~d~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~ 251 (401)
T PRK00854 175 GDAEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADV 251 (401)
T ss_pred CCHHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCE
Confidence 99999999886 468999999999999999999999999999999999999999999999 87766656667888999
Q ss_pred hhhhhhccCC-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 247 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 247 ~~~sK~~~~G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
+++||++++| +|+|++++++++++.+.. ..++.+++.++++++++.++++.++++++.++++++.+++.+.|+++.
T Consensus 252 ~~~~K~l~gg~~~ig~v~~~~~~~~~l~~---~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~ 328 (401)
T PRK00854 252 TLIGKALSGGFYPVSAVLSNSEVLGVLKP---GQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR 328 (401)
T ss_pred EEecccccCCccCeEEEEEcHHHHhcccC---CCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999987 799999999999887763 235568889999999999999988777789999999999999999873
Q ss_pred HhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHHH
Q 015230 326 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITA 403 (411)
Q Consensus 326 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~~ 403 (411)
. .....+++.|.++.+++... ......+.+.|+++||++.+.+.+.+|+. +.+|+++|++++++
T Consensus 329 ~--~~~~~~~g~g~~~~i~~~~~------------~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~ 394 (401)
T PRK00854 329 S--NIVREVRGRGLMLAVELEPE------------AGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQ 394 (401)
T ss_pred c--CceEEEeccceEEEEEEecC------------chhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHH
Confidence 2 23345677788888877432 12346889999999999987665677774 68899999999999
Q ss_pred HHHHHH
Q 015230 404 AEKVLR 409 (411)
Q Consensus 404 l~~~~~ 409 (411)
|++++.
T Consensus 395 l~~~l~ 400 (401)
T PRK00854 395 IAKVLA 400 (401)
T ss_pred HHHHhh
Confidence 998875
No 84
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.4e-47 Score=360.13 Aligned_cols=360 Identities=27% Similarity=0.351 Sum_probs=297.9
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCCCHHHHHHHHHHHhhCCCCCEE
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 95 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~v 95 (411)
.|+++.+++|+++||.||++|+||.++++...+|| ||++++++.++++....+ .+..+.+.++++.+... ....+
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~--~~~~~ 87 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD--KDYLA 87 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC--cCCEE
Confidence 47889999999999999999999999988899999 999999999999874322 23466667777766432 22357
Q ss_pred EEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHH
Q 015230 96 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 175 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 175 (411)
+|++||++|++.|+++++.++++++|++++++|||++..++..++......... ... ..+...+++|++++++
T Consensus 88 ~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~dl~~l~~ 160 (375)
T PRK04260 88 FFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFG--DGV-----PHFSYAIFNDLNSVKA 160 (375)
T ss_pred EEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCC--CCC-----CCeEEeCCCCHHHHHH
Confidence 999999999999999998888889999999999999888776665532221111 011 1122345679999998
Q ss_pred HHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc
Q 015230 176 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG 254 (411)
Q Consensus 176 ~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~ 254 (411)
.+. +++++|++||+++++|.+.++.+|+++|.++|++||+++|+||+|+|+ +.|..+..+.+++.||++||||+++
T Consensus 161 ~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~ 237 (375)
T PRK04260 161 LVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA 237 (375)
T ss_pred hcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc
Confidence 775 468999999999999999999999999999999999999999999999 8777666667788999999999999
Q ss_pred CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 015230 255 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 334 (411)
Q Consensus 255 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (411)
+|+|+|++++++++.+.+.. ..+.+|+++++++++++.++++.++.+++++++++..+++++.++++..+++....+
T Consensus 238 ~G~~ig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (375)
T PRK04260 238 NGVPVGAMLAKSSLGGAFGY---GSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV 314 (375)
T ss_pred CCcceEEEEEcHHHHhhcCC---CCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE
Confidence 99999999999999888763 235678999999999999999998778889999999999999999987777766677
Q ss_pred eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHH
Q 015230 335 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 335 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~ 408 (411)
++.|+++|+++... ..++.+.|.++||++.+.+.+.+|+ +..++++++++++++|++++
T Consensus 315 ~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 315 RGLGYMIGIETTAD---------------LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred eccceEEEEEecCc---------------HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 78899999998321 2578999999999999876666776 58889999999999998763
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=8.7e-45 Score=342.87 Aligned_cols=362 Identities=30% Similarity=0.447 Sum_probs=295.2
Q ss_pred CCCeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--CCCCCHHHHHHHHHHHhhCCCCCE
Q 015230 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEM 94 (411)
Q Consensus 17 ~~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 94 (411)
..|+++.+++|.+++|.+|++|+||.++++.+++||+||.+.+++.++++.... ..++.+...++++++++.++ .++
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~ 86 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHSG-ADR 86 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC-CCE
Confidence 468899999999999999999999999999999999999999999999987421 23567888999999999984 569
Q ss_pred EEEeCChHHHHHHHHHHHHhccC-----CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC
Q 015230 95 VRFVNSGTEACMGVLRLARAFTG-----RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 169 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~-----~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 169 (411)
+++++||++|++.++++++.+++ +++|++++++||+....+....+....... ..+ ...+....+++|
T Consensus 87 ~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~d 159 (379)
T TIGR00707 87 VFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKG-----FEP--LVPGFSYAPYND 159 (379)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhcc-----CCC--CCCCceeeCCCC
Confidence 99999999999999998765544 689999999999988877766654221100 000 112344566779
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhh
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 248 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~ 248 (411)
++++++.++ +++++++++|+++++|...++.+++++|.++|++|++++|+||+|++| +.|........+..||+++
T Consensus 160 ~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t 236 (379)
T TIGR00707 160 IESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIIT 236 (379)
T ss_pred HHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEE
Confidence 999999886 357899999999989988788888999999999999999999999988 7665444455677899999
Q ss_pred hhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 249 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 249 ~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
|||++++|+|+||+++++++++.+... ....+++.++++++++.++++.++.+++.++++++.++++++|+++....
T Consensus 237 ~sK~~~~G~riG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (379)
T TIGR00707 237 LAKGLGGGVPIGATLAKEEVAEAFTPG---DHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNY 313 (379)
T ss_pred EcccccCCcccEEEEEcHHHHhhhcCC---CCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999998888742 23457788999999999999987767788999999999999999876554
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEK 406 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~~l~~ 406 (411)
+. ...++.|.++++.+.+. ..++.+.|.++||++.+.+.+.+|++ +.+|++++++++++|++
T Consensus 314 ~~-~~~~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 314 PN-KEVRGKGLMLGIELEAP---------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred CC-CccccCceEEEEEecCc---------------HHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 43 23445688888877421 26888999999999999876678885 56899999999999987
Q ss_pred HH
Q 015230 407 VL 408 (411)
Q Consensus 407 ~~ 408 (411)
++
T Consensus 378 ~~ 379 (379)
T TIGR00707 378 AI 379 (379)
T ss_pred hC
Confidence 63
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-38 Score=267.97 Aligned_cols=369 Identities=20% Similarity=0.233 Sum_probs=296.1
Q ss_pred EEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHH-----HHHcCCC--CCCCCHHHHHHHHHHHhhCC-CC
Q 015230 21 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE-----TMKKGTS--FGAPCLLENVLAEMVISAVP-SI 92 (411)
Q Consensus 21 ~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~-----~l~~~~~--~~~~~~~~~~l~~~l~~~~~-~~ 92 (411)
-..++-|.+++|.||+.++|..+..++.++|++||.+..++.. .+-+-.. .-.+.++.+.+.+-+....| +.
T Consensus 61 dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~ 140 (484)
T KOG1405|consen 61 DYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQ 140 (484)
T ss_pred hhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchH
Confidence 3468889999999999999999999999999999998887532 2222111 12246667777777888888 89
Q ss_pred CEEEEeCChHHHHHHHHHHHHhc--------------------------cCCcEEEEEeCCcCCCchhhhhhcC-CCCcc
Q 015230 93 EMVRFVNSGTEACMGVLRLARAF--------------------------TGRERIIKFEGCYHGHADPFLVKAG-SGVAT 145 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~--------------------------~~~~~vi~~~~~~~~~~~~~~~~~g-~~~~~ 145 (411)
++|+..-+|+.|++.|++.++.+ .+.-.|+.|.++|||++.+.+..+. +++++
T Consensus 141 ~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHK 220 (484)
T KOG1405|consen 141 KQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHK 220 (484)
T ss_pred HHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccc
Confidence 99999999999999999987422 0123699999999999999888775 57888
Q ss_pred cCCCCCCCCCCCCCCceeecC----CC------CHHHHHHHHHcCC---CcEEEEEEcccCCCCCccCCCHHHHHHHHHH
Q 015230 146 LGLPDSPGVPKGATYETLTAP----FN------DVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 212 (411)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~----~~------d~~~l~~~~~~~~---~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l 212 (411)
+.+|-+++-...+..--+.++ +| +++++|+.|.++. ..++++|+||.+++||....+++|++.|+++
T Consensus 221 ldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi 300 (484)
T KOG1405|consen 221 LDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDI 300 (484)
T ss_pred cCCCCCCCCCCCCccccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHH
Confidence 887766654332222222221 11 3778888887653 3688999999999999999999999999999
Q ss_pred HHHhCCEEEEecccccc-ccccCccccccCCC--cchhhhhhhcc-CCcccccccccHHHHHHhcCCCCcccccCCCCCH
Q 015230 213 TKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 288 (411)
Q Consensus 213 ~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~--~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 288 (411)
|+||++.+|+||||+|. .+|.+++.++|++. ||++||||-|. || +.. . +.+++..++.+++||.+.|
T Consensus 301 ~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gG----ffh-~----~~frpn~pYrifNTWmGdP 371 (484)
T KOG1405|consen 301 TKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGG----FFH-D----EEFRPNEPYRIFNTWMGDP 371 (484)
T ss_pred HHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCc----ccc-C----cccCCCchHHHhhhhcCCh
Confidence 99999999999999999 89999999999885 89999999987 44 322 2 2234445666788999999
Q ss_pred HHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCC-ceEEeeecceEEEEEecCCCCCcchhcccchHHHHHH
Q 015230 289 LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 367 (411)
Q Consensus 289 ~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (411)
.-.....++++.+.++.+.++.+..++++..+|.++..++|. .-..+|+|.|+.+++++. ..-+++
T Consensus 372 ~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~-------------~~Rdk~ 438 (484)
T KOG1405|consen 372 SKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSG-------------SIRDKL 438 (484)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCCh-------------HHHHHH
Confidence 988888888999988999999999999999999999999884 456789999999999543 344689
Q ss_pred HHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 368 YRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 368 ~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
...++-+|+.+..++...+|+ ++..++.+.+-++++++++++.+
T Consensus 439 i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 439 ILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred HHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhccC
Confidence 999999999999988777665 68889999999999999998764
No 87
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.4e-35 Score=280.43 Aligned_cols=347 Identities=20% Similarity=0.299 Sum_probs=261.1
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHc-CCC------CCCCCHHHHHHHHHHHhhCC
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVP 90 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~-~~~------~~~~~~~~~~l~~~l~~~~~ 90 (411)
.+++.++.|++++ .+|++++||.++ +++|+ .||++++++.+++++ +.+ +.++.+.+.++.+.+++.++
T Consensus 93 ~~~~~~~~G~~i~-~~G~~~id~~s~---~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~ 168 (481)
T PLN02822 93 PPVLESAAGPHTI-INGKDVVNFASA---NYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG 168 (481)
T ss_pred CCceecCCCCeEE-ECCceEEEeECC---CcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC
Confidence 4478889999999 899999999998 78888 899999999999998 432 23457778999999999998
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCH
Q 015230 91 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 170 (411)
Q Consensus 91 ~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 170 (411)
..+.+++++|++ ++..+++ .+.+++++|++++.||........+.+ ..+..++|+|.
T Consensus 169 ~~~~i~~s~G~~-a~~sai~---a~~~~gd~Ii~d~~~H~s~~~~~~ls~-------------------~~~~~~~~nd~ 225 (481)
T PLN02822 169 TPDSILYSYGLS-TIFSVIP---AFCKKGDIIVADEGVHWGIQNGLYLSR-------------------STIVYFKHNDM 225 (481)
T ss_pred CCCEEEECCHHH-HHHHHHH---HhCCCCCEEEEeCCccHHHHHHHHHcC-------------------CeEEEECCCCH
Confidence 778888887666 6777777 567777888899999976544443433 24667888899
Q ss_pred HHHHHHHHcCC------CcE-EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCcccccc
Q 015230 171 SALENLFENNK------GEI-AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYF 240 (411)
Q Consensus 171 ~~l~~~~~~~~------~~~-~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~ 240 (411)
++++..+++.. .++ ++|++|++++++|.+.+ +++|.++|++||++||+||+|+ |. ++|.. ..+++
T Consensus 226 ~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~ 300 (481)
T PLN02822 226 ESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHF 300 (481)
T ss_pred HHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHc
Confidence 88888776421 223 79999999999999999 9999999999999999999997 32 33433 45677
Q ss_pred CC---Ccchh--hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCC--CHHHHHHHHHHHHHHhc-CChHHHHHH
Q 015230 241 GV---TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG--NPLAMTAGIHTLKRLKE-PGTYEYLNK 312 (411)
Q Consensus 241 ~~---~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~~a~~~~~l~~~~~-~~~~~~~~~ 312 (411)
++ .+|++ +|||+++. ..||+++++++++.++... .+.+++. ++..++++.++++.++. +++++++++
T Consensus 301 ~v~~~~~dii~~s~sKalg~--~GG~i~g~~~ii~~~~~~~---~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~ 375 (481)
T PLN02822 301 GVPIEKIDIITAAMGHALAT--EGGFCTGSARVVDHQRLSS---SGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKE 375 (481)
T ss_pred CCCCCCCeEEEecchhhhhh--CCeEEEcCHHHHHHHHhcC---CceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 76 57875 58999983 1278889999998887432 3335544 47788888889988766 678899999
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC--------
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------- 383 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~-------- 383 (411)
+.+++++.|++.. ++.....+.+.++++.+.+... . ...+.....++++.|. ++||++.++.+
T Consensus 376 ~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~~-~----~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~ 447 (481)
T PLN02822 376 NIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKSTG-S----AKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRL 447 (481)
T ss_pred HHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCcc-c----ccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCC
Confidence 9999999998752 2222223457788888743200 0 0012233567888887 78999997632
Q ss_pred -cceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 384 -EAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 384 -~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+.+|+ +..+|+++|++++++|++++..
T Consensus 448 ~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 448 PVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 23665 5679999999999999998765
No 88
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=267.15 Aligned_cols=340 Identities=18% Similarity=0.238 Sum_probs=236.5
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccC-CCcHHHHHHHHHHHHcC--CCCC-----CCCHHHHHHHHHHHhhC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIG-HADDQVLAALGETMKKG--TSFG-----APCLLENVLAEMVISAV 89 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g-~~~~~v~~a~~~~l~~~--~~~~-----~~~~~~~~l~~~l~~~~ 89 (411)
.++.+.+++|+++||.+|++|+||.++ +++| |+||++++|+.+++++. .... ...+...++++.+++.+
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~ 104 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF 104 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh
Confidence 467899999999999999999999997 8999 89999999999999873 1211 23567789999999888
Q ss_pred CCCCEEEEeCChHHHHHHHHHHHHh--cc-CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 90 PSIEMVRFVNSGTEACMGVLRLARA--FT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 90 ~~~~~v~~~~~g~~a~~~al~~~~~--~~-~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
+. +.+++++|++|++.++++++. ++ ++.++|+++.+||+...... .... ...++..++
T Consensus 105 ~~--~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~----------------~~~~-~~~~v~~~~ 165 (402)
T PRK07505 105 GA--SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILK----------------GICA-DETEVETID 165 (402)
T ss_pred CC--CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhh----------------hhhh-cCCeEEEeC
Confidence 65 666667899999999987643 23 45678899999997321100 0000 013567788
Q ss_pred CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc--cc-ccccCccccccCC-
Q 015230 167 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT--GF-RLAYGGAQEYFGV- 242 (411)
Q Consensus 167 ~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~--g~-~~g~~~~~~~~~~- 242 (411)
++|++++++.++. +...+++++|++++ |.+.+ +++|.++|++||++||+||+|+ ++ ++|..+..++.+.
T Consensus 166 ~~d~~~l~~~~~~--~~~~~vl~~p~~~~-G~~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~ 238 (402)
T PRK07505 166 HNDLDALEDICKT--NKTVAYVADGVYSM-GGIAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYR 238 (402)
T ss_pred CCCHHHHHHHHhc--CCCEEEEEeccccc-CCcCC----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCC
Confidence 8999999998864 35778899998876 55566 8999999999999999999994 56 6676555566665
Q ss_pred Ccchh----hhhhhccCCccccccc-ccHHHHHHhcCCCCcccccCC--CCCHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q 015230 243 TPDLT----TLGKIIGGGLPVGAYG-GRRDIMEMVAPAGPMYQAGTL--SGNPLAMTAGIHTLKRLKEPGTYEYLNKITG 315 (411)
Q Consensus 243 ~~d~~----~~sK~~~~G~~~g~~~-~~~~~~~~~~~~~~~~~~~t~--~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~ 315 (411)
.||.+ |+||+++++ .|+++ .++++++.+.... ...++ +.++++++++.++++.+.++.+.+. ..
T Consensus 239 ~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~---~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~----~~ 309 (402)
T PRK07505 239 LNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYA---GPLAFSQSLNVAALGAILASAEIHLSEELDQL----QQ 309 (402)
T ss_pred CCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhC---CCceeCCCCCHHHHHHHHHHHHHHhccCcHHH----HH
Confidence 56643 899999852 36665 4778888776422 22233 3456889999898886654443322 22
Q ss_pred HHHHHHHHHHHhcCCceEEeeecceE-EEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------ccee
Q 015230 316 ELTQGIIDAGKKAGHAICGGYISGMF-GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGF 387 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~ 387 (411)
+++++++.+..... ...++.+.++ ++.+ +....+.++.+.|.++||++.+..+ +.+|
T Consensus 310 ~l~~~~~~~~~~~~--~~~~g~~~~i~~~~~-------------~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lR 374 (402)
T PRK07505 310 KLQNNIALFDSLIP--TEQSGSFLPIRLIYI-------------GDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLR 374 (402)
T ss_pred HHHHHHHHHHHHHH--hcCCCCCCCEEEEEe-------------CCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEE
Confidence 33333322211000 1123334433 2222 1122357899999999999987521 3466
Q ss_pred e--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 388 T--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 388 ~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+ ++.+|++++++++++|++++++
T Consensus 375 i~~~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 375 IMFRASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred EecCccCCHHHHHHHHHHHHHHHHh
Confidence 6 4668999999999999998764
No 89
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=8.9e-33 Score=251.99 Aligned_cols=329 Identities=22% Similarity=0.319 Sum_probs=255.3
Q ss_pred CcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHc-CCCC------CCCCHHHHHHHHHHHhhCCCCCEEEEe
Q 015230 27 GSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFV 98 (411)
Q Consensus 27 g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~-~~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~ 98 (411)
+.+++ .+|++++||.|| +|+|+ +||++++++.++++. +.+. .+....+.+|.+.+++.+ +.+..++.
T Consensus 31 ~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~e~al~f 105 (388)
T COG0156 31 GLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GAEAALLF 105 (388)
T ss_pred Cccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CCCcEEEE
Confidence 45554 669999999999 99999 999999999999999 3332 345777888888888887 66667777
Q ss_pred CChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHH
Q 015230 99 NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 178 (411)
Q Consensus 99 ~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 178 (411)
+||-.|+..++. .+.+++++|+.+.-.|........+++ .+...++|||+++||+.++
T Consensus 106 ~SGy~AN~~~i~---~l~~~~dli~~D~lnHASiidG~rls~-------------------a~~~~f~HnD~~~Le~~l~ 163 (388)
T COG0156 106 SSGFVANLGLLS---ALLKKGDLIFSDELNHASIIDGIRLSR-------------------AEVRRFKHNDLDHLEALLE 163 (388)
T ss_pred cccchhHHHHHH---HhcCCCcEEEEechhhhhHHHHHHhCC-------------------CcEEEecCCCHHHHHHHHH
Confidence 789999999998 667778999999999986544444433 4678899999999999998
Q ss_pred cCCC---cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcc-----hhh
Q 015230 179 NNKG---EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPD-----LTT 248 (411)
Q Consensus 179 ~~~~---~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d-----~~~ 248 (411)
+.+. +.++|++|.++++.|.+.| +++|.++|+||+++|++||+|+ |+ .....+..+++|+.++ ++|
T Consensus 164 ~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gT 239 (388)
T COG0156 164 EARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGT 239 (388)
T ss_pred hhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEE
Confidence 7321 4689999999999999999 9999999999999999999996 66 3323344556666533 459
Q ss_pred hhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 249 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 249 ~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
|||+|++ --|++.++..+++.+....+.+.+ +.+.+|..++++.++++.+++ .+.+++++++..++++.++..
T Consensus 240 lsKAlGs--~Gg~v~g~~~~~d~L~~~ar~~if-StalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~--- 313 (388)
T COG0156 240 LGKALGS--SGGYIAGSAALIDYLRNRARPFIF-STALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL--- 313 (388)
T ss_pred chhhhcc--cCceeeCcHHHHHHHHHhCCceec-cCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc---
Confidence 9999995 245668899999998865555555 557788888888999999887 788999999999999666654
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc-------eee--ecCCCHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSSDDIQ 398 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~-------~~~--~~~~t~~~i~ 398 (411)
++.. ......++.+.+ .+...+.++...|+++||++.+..++. +|+ +..+|+++|+
T Consensus 314 -~~~~-~~s~s~I~pv~~-------------gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~ 378 (388)
T COG0156 314 -GLVL-LPSESPIIPVIL-------------GDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDID 378 (388)
T ss_pred -CCcc-CCCCCCeeeeEe-------------CCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHH
Confidence 2211 122233444544 455567889999999999998876654 454 6889999999
Q ss_pred HHHHHHHHH
Q 015230 399 HTITAAEKV 407 (411)
Q Consensus 399 ~~i~~l~~~ 407 (411)
++++.|.++
T Consensus 379 ~l~~~l~~~ 387 (388)
T COG0156 379 RLAEALSEV 387 (388)
T ss_pred HHHHHHHhh
Confidence 999999865
No 90
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=1.5e-32 Score=256.04 Aligned_cols=326 Identities=17% Similarity=0.167 Sum_probs=246.2
Q ss_pred CCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACM 106 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~ 106 (411)
++++++|.+| +|+|+ .||++++++.+++++. .+. .+....++++.+.+++.+ +.+++++.++|..|+.
T Consensus 101 ~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~e~all~sSGy~AN~ 176 (476)
T PLN02955 101 FKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK-KKEDCLVCPTGFAANM 176 (476)
T ss_pred CceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH-CCCcEEEECChHHHHH
Confidence 4689999999 99999 9999999999999983 222 344666777888887777 7778888889999999
Q ss_pred HHHHHHHh-----------ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHH
Q 015230 107 GVLRLARA-----------FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 175 (411)
Q Consensus 107 ~al~~~~~-----------~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 175 (411)
.++..... ..+++.+|+.+...|........+... ....++..++|||+++|++
T Consensus 177 ~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~---------------~~~a~~~~f~HND~~~Le~ 241 (476)
T PLN02955 177 AAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAER---------------QGNVEVFVYRHCDMYHLNS 241 (476)
T ss_pred HHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccc---------------cCCceEEEeCCCCHHHHHH
Confidence 99974310 124566788888888655444333211 0123577889999999999
Q ss_pred HHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc--cCccccccCCCcch----hhh
Q 015230 176 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA--YGGAQEYFGVTPDL----TTL 249 (411)
Q Consensus 176 ~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g--~~~~~~~~~~~~d~----~~~ 249 (411)
.+++.+++.++|++|+++++.|.+.| +++|.++|++||++||+||+|+.+..| ..+..+++++.+|+ .||
T Consensus 242 ~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TL 317 (476)
T PLN02955 242 LLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTL 317 (476)
T ss_pred HHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeC
Confidence 99877667789999999999999999 999999999999999999999733333 34556677776664 699
Q ss_pred hhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 250 GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 250 sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
||+++. +.|++++++++++.++.....+.+++ ..++..+++++++++.+.. +..+++++++.+++++.+
T Consensus 318 sKA~G~--~GGfi~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~------- 387 (476)
T PLN02955 318 SKAAGC--HGGFIACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS------- 387 (476)
T ss_pred ccchhc--cCceeecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc-------
Confidence 999984 56678889988888876555555545 6667777778888888755 456677888888887631
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc-------eee--ecCCCHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSSDDIQH 399 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~-------~~~--~~~~t~~~i~~ 399 (411)
++.. ...++.+.+ ++...+..+.+.|+++||++.+..++. +|+ +..+|++||++
T Consensus 388 G~~~----~sPI~pI~i-------------g~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~ 450 (476)
T PLN02955 388 GVDI----SSPIISLVV-------------GNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKK 450 (476)
T ss_pred CCCC----CCCEEEEEe-------------CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHH
Confidence 2211 144555544 456667889999999999998876653 454 67899999999
Q ss_pred HHHHHHHHHHh
Q 015230 400 TITAAEKVLRQ 410 (411)
Q Consensus 400 ~i~~l~~~~~~ 410 (411)
++++|.++...
T Consensus 451 lv~~L~~~~~~ 461 (476)
T PLN02955 451 LITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHhh
Confidence 99999987653
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=7.7e-32 Score=255.98 Aligned_cols=329 Identities=21% Similarity=0.210 Sum_probs=239.5
Q ss_pred cCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC-C------CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT-S------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEA 104 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~-~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a 104 (411)
.+|+++++|.+| +|+|+ .||++++++.+++++.. + ..+..+...++.+.+++.++ .++.+++++|++|
T Consensus 42 ~~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~~~~l~~~sG~~a 117 (402)
T TIGR01821 42 DGAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-KESALVFTSGYVA 117 (402)
T ss_pred CCCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-CCeEEEECchHHH
Confidence 346899999999 99999 89999999999999832 2 12346678899999999886 4577888889999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-Cc
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GE 183 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~ 183 (411)
++.+++++... .++++++.+..+|+.....+...+. ++..++++|++++++.++... ++
T Consensus 118 n~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (402)
T TIGR01821 118 NDATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGA-------------------EKFIFRHNDVAHLEKLLQSVDPNR 177 (402)
T ss_pred HHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCC-------------------eEEEECCCCHHHHHHHHHhccCCC
Confidence 99999865432 2456777777788655443333222 233456679999999887543 35
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCC--Ccchh--hhhhhccCC
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGG 256 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~--~~d~~--~~sK~~~~G 256 (411)
+++|+++++++++|.+.+ +++|.++|++||+++|+||+|+ |+ ..|.. .....++ .+|++ ||||++++
T Consensus 178 ~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~- 251 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDGLMHRIDIIEGTLAKAFGV- 251 (402)
T ss_pred CeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhccCCCCCeEEEEechhhhcc-
Confidence 789999999999999998 9999999999999999999997 54 33322 2234443 35765 99999984
Q ss_pred cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 257 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
..||+++++++++.+......+. .+.+.++.+++++.++++.+++ +.++++.+++.+++++.|+++. ++.. .
T Consensus 252 -~GG~i~~~~~~~~~l~~~~~~~~-~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~---~ 324 (402)
T TIGR01821 252 -VGGYIAASRKLIDAIRSYAPGFI-FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG--IPVI---P 324 (402)
T ss_pred -CCceeecCHHHHHHHHHhCcCce-ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC--CCcC---C
Confidence 23788889888888764332222 2557888999999999998776 4456667788888888887752 1211 2
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCC-------Ccceee--ecCCCHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~-------~~~~~~--~~~~t~~~i~~~i~~l~ 405 (411)
..+.++.+.+. ....+.++.+.|.+ +||++.+.. ...+|+ +..+|++|+++++++|+
T Consensus 325 ~~~~i~~i~~~-------------~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 325 NPSHIVPVIIG-------------DAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred CCCCEEEEEeC-------------CHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 34666666552 12234678888875 599997642 234666 57899999999999999
Q ss_pred HHHHhC
Q 015230 406 KVLRQI 411 (411)
Q Consensus 406 ~~~~~~ 411 (411)
++++++
T Consensus 392 ~~~~~~ 397 (402)
T TIGR01821 392 LVWDRL 397 (402)
T ss_pred HHHHHc
Confidence 988763
No 92
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=1.3e-31 Score=254.48 Aligned_cols=327 Identities=19% Similarity=0.197 Sum_probs=240.7
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC-CC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~-~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~ 105 (411)
+|+++++|.+| +|+|+ +||++++++.+++++.. +. .+..+...++.+.+++.++ .+++++++||++|+
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g-~~~~~~~~SG~~An 118 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG-KEAALLFTSGYVSN 118 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC-CCcEEEeCCcHHHH
Confidence 35899999999 99999 89999999999999842 11 2335578899999999885 46888888899999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC-CCcE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEI 184 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~~ 184 (411)
+.+++.+... .++++|+.+..+|+.....+...+. ++..++++|++++++.++.. ++++
T Consensus 119 ~~ai~~l~~~-~~g~~I~~~~~~H~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~~ 178 (406)
T PRK13393 119 WAALSTLGSR-LPGCVILSDELNHASMIEGIRHSRA-------------------EKRIFRHNDPADLERKLSDLDPHRP 178 (406)
T ss_pred HHHHHHhhcC-CCCCEEEEccchhHHHHHHHHHcCC-------------------eEEEeCCCCHHHHHHHHHhccCCCC
Confidence 9999843221 1346888888999866554433222 24456777999999888754 2367
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCCC--cchh--hhhhhccCCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT--PDLT--TLGKIIGGGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~~--~d~~--~~sK~~~~G~ 257 (411)
++|+++++++++|.+.+ +++|.++|++|++++|+||+|+ |+ +.|..+ .++.++. +|++ ||||+++.
T Consensus 179 ~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~-- 251 (406)
T PRK13393 179 KLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV-- 251 (406)
T ss_pred EEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc--
Confidence 89999999999999999 9999999999999999999997 66 444332 2444443 5665 99999984
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
..||+++++++++.+......+. .+.+.++.+++++.++++.++.. ..+++++++.+++++.|+++. ++. .++
T Consensus 252 ~GG~~~~~~~~~~~l~~~~~~~~-~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~~ 325 (406)
T PRK13393 252 MGGYITGSAALCDFIRSFASGFI-FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG--IPH---LPN 325 (406)
T ss_pred cCceeeCCHHHHHHHHHhCcCce-ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC--CCc---CCC
Confidence 23788888888888764332222 36677888899999999887652 234566788888888887752 222 244
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCC-------Ccceee--ecCCCHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~-------~~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
.|.++.+.+. +...+.++.+.|.+ +||++.+.. ...+|+ ++.+|++|+++++++|++
T Consensus 326 ~~~i~~v~~~-------------~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~ 392 (406)
T PRK13393 326 PSHIVPVMVG-------------DPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSE 392 (406)
T ss_pred CCCeEEEEeC-------------CHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 5777666542 12345678888887 599997642 234676 678999999999999999
Q ss_pred HHHh
Q 015230 407 VLRQ 410 (411)
Q Consensus 407 ~~~~ 410 (411)
++.+
T Consensus 393 ~~~~ 396 (406)
T PRK13393 393 IWAR 396 (406)
T ss_pred HHHh
Confidence 8765
No 93
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=4.5e-31 Score=251.28 Aligned_cols=327 Identities=21% Similarity=0.224 Sum_probs=235.9
Q ss_pred CCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC-C------CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT-S------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACM 106 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~-~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~ 106 (411)
|++++||.++ +|+|+ .||++++++.+++++.. + ..++.+...++.+.+++.++ .++.++.++|++|+.
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~~~~~~~~sG~~an~ 120 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-KEAALVFTSGYVSND 120 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-CCcEEEECcHHHHHH
Confidence 5899999999 99999 79999999999998742 1 12356778899999998886 456677778999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-CcEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIA 185 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~ 185 (411)
.+++++... .++.+++.+..+|+.....+...+ .+...++++|++++++.+++.. ++++
T Consensus 121 ~ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~~~-------------------~~~~~~~~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 121 ATLSTLAKL-IPDCVIFSDELNHASMIEGIRRSR-------------------CEKHIFRHNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHHhCC-CCCCEEEEeCcchHHHHHHHHHcC-------------------CcEEEECCCCHHHHHHHHHhccCCCCe
Confidence 999865433 245566666555653322222211 1234566779999999987543 4678
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCC--Ccchh--hhhhhccCCcc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLP 258 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~--~~d~~--~~sK~~~~G~~ 258 (411)
+|+++++++++|.+.+ +++|.++|++||++||+||+|+ |+ +.|... .++.++ .+|++ ||||+++. .
T Consensus 181 ~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~--~ 253 (407)
T PRK09064 181 LIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV--M 253 (407)
T ss_pred EEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--c
Confidence 9999999999999998 9999999999999999999997 64 444332 344444 45766 99999983 2
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
.||+++++++++.+......+. .+.+.++.+++++.++++.++. +..+++++++.+++++.|+++. +... ...
T Consensus 254 GG~~~~~~~~~~~l~~~~~~~~-~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~---~~~ 327 (407)
T PRK09064 254 GGYIAGSAALVDAVRSYAPGFI-FTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG--IPVM---PNE 327 (407)
T ss_pred CceEecCHHHHHHHHHhCcccc-ccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--CCCC---CCC
Confidence 3788889888887764322222 2556778888999999998876 3446788899999999988752 1211 233
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCCC-------cceee--ecCCCHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~~-------~~~~~--~~~~t~~~i~~~i~~l~~~ 407 (411)
+.++.+.+. ....+..+.+.|.+ +||++.+..+ +.+|+ ++.+|++|++++++.|+++
T Consensus 328 ~~iv~i~~~-------------~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 328 SHIVPVMVG-------------DPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred CCEEEEEeC-------------CHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 666666552 12334678888875 5999976422 34666 5788999999999999998
Q ss_pred HHhC
Q 015230 408 LRQI 411 (411)
Q Consensus 408 ~~~~ 411 (411)
++++
T Consensus 395 ~~~~ 398 (407)
T PRK09064 395 WARL 398 (407)
T ss_pred HHHc
Confidence 8753
No 94
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-31 Score=246.64 Aligned_cols=333 Identities=18% Similarity=0.176 Sum_probs=240.2
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CC---CCCCHHHHHHHHHHHhhCC---CCCE-EEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SF---GAPCLLENVLAEMVISAVP---SIEM-VRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~---~~~~~~~~~l~~~l~~~~~---~~~~-v~~~~~g~~a~~~ 107 (411)
..++|+..+ .|---.++.+++++.+++..+. .| .+..++++.+++++.+.++ .+++ |++|+|+++|+..
T Consensus 28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 468998888 5533378889999999999853 33 3558899999999999986 3544 9999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC-CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
++.. ...+++.||+.+|.|... .....+.|..+..++.... .++.. |++++++.++. ++++
T Consensus 105 ~~~a--~~~pGDeVlip~P~Y~~y-~~~~~~~gg~~v~v~l~~~~~~f~~------------d~~~l~~~i~~---ktk~ 166 (393)
T COG0436 105 AFLA--LLNPGDEVLIPDPGYPSY-EAAVKLAGGKPVPVPLDEEENGFKP------------DLEDLEAAITP---KTKA 166 (393)
T ss_pred HHHH--hcCCCCEEEEeCCCCcCH-HHHHHhcCCEEEEEeCCcCccCCcC------------CHHHHHhhcCc---cceE
Confidence 9974 345678899999999864 4444455554444333111 23322 89999999883 6777
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc--CccccccC---CCcchhhhhhhcc-CCccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQEYFG---VTPDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~--~~~~~~~~---~~~d~~~~sK~~~-~G~~~ 259 (411)
++++..+|++|.+.. ++.+++|.++|++|+++||+||+|.++ ..+. ....+..+ ....+-+|||.++ .|||+
T Consensus 167 i~ln~P~NPTGav~~-~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 167 IILNSPNNPTGAVYS-KEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEEeCCCCCcCcCCC-HHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 777766666676554 555999999999999999999999998 6552 22222222 1233458999999 79999
Q ss_pred cccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcC-CceE
Q 015230 260 GAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAG-HAIC 333 (411)
Q Consensus 260 g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~ 333 (411)
||++++ +++++.+.. .....+.+.+.+++.++.++|+.-+. +..++.++++.+.+.+.|+++ + +...
T Consensus 246 G~~v~~~~~l~~~~~~---~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~----~g~~~~ 318 (393)
T COG0436 246 GWVVGPPEELIAALRK---LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI----GGLSVV 318 (393)
T ss_pred eEeecChHHHHHHHHH---HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc----CCeeec
Confidence 999988 778777752 22344668899999999999875421 444456777777777777765 4 3333
Q ss_pred E-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCC-------CcceeeecCCCHHHHHHHHHHH
Q 015230 334 G-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAA 404 (411)
Q Consensus 334 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~-------~~~~~~~~~~t~~~i~~~i~~l 404 (411)
. ...++++|+++... .+..++++.|.++ ||.|.||. .+.+|++++.+.++++++++++
T Consensus 319 ~~p~Ga~Y~~~~i~~~-------------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl 385 (393)
T COG0436 319 KPPEGAFYLFPKIPEL-------------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRL 385 (393)
T ss_pred cCCCeeEEEEeecCCC-------------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHH
Confidence 3 33567777777432 1225666666655 89999973 2458999999999999999999
Q ss_pred HHHHHh
Q 015230 405 EKVLRQ 410 (411)
Q Consensus 405 ~~~~~~ 410 (411)
.+.+..
T Consensus 386 ~~~~~~ 391 (393)
T COG0436 386 ARFLAE 391 (393)
T ss_pred HHHHHh
Confidence 998765
No 95
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=7.6e-30 Score=242.12 Aligned_cols=341 Identities=21% Similarity=0.293 Sum_probs=238.7
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHc-CCCCC------CCCHHHHHHHHHHHhhCC
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVP 90 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~-~~~~~------~~~~~~~~l~~~l~~~~~ 90 (411)
+..+.++.|.++++.+|++++||.++ +|+|+ .+|++++++.++++. +.+++ +..+...++.+.+++.++
T Consensus 21 ~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g 97 (393)
T TIGR01822 21 ERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLG 97 (393)
T ss_pred ccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC
Confidence 56678888999998899999999999 89999 699999999999987 33322 224556777788888875
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCH
Q 015230 91 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 170 (411)
Q Consensus 91 ~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 170 (411)
.+++++++||++|+..++... ..+++.|++.++.|++.... ....+.. ...+.++|+
T Consensus 98 -~~~~ii~~~~~~a~~~~~~~l--~~~gd~vi~~~~~~~s~~~~-~~~~~~~-------------------~~~~~~~d~ 154 (393)
T TIGR01822 98 -TEDTILYASCFDANGGLFETL--LGAEDAIISDALNHASIIDG-VRLCKAK-------------------RYRYANNDM 154 (393)
T ss_pred -CCcEEEECchHHHHHHHHHHh--CCCCCEEEEeccccHHHHHH-HHhcCCc-------------------eEEeCCCCH
Confidence 456777789999999877643 45567777777666653332 2222221 122335699
Q ss_pred HHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-c-cccCccccccCC--
Q 015230 171 SALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV-- 242 (411)
Q Consensus 171 ~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~-~g~~~~~~~~~~-- 242 (411)
+++++.++.. ..++++|+++++++++|.+.+ +++|.++|++||++||+||+|+ |+ . .+. ...+..+.
T Consensus 155 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~ 229 (393)
T TIGR01822 155 ADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGR-GSHELCGVMG 229 (393)
T ss_pred HHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCC-chHHhcCCCC
Confidence 9999988852 126788999999999999988 9999999999999999999995 44 2 221 11222332
Q ss_pred Ccchh--hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHH
Q 015230 243 TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 319 (411)
Q Consensus 243 ~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 319 (411)
.+|++ |+||+++ |+|+||+++++++++.+......+.. +.+.++..++++.++++.++. ++.+++++++.+++++
T Consensus 230 ~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 307 (393)
T TIGR01822 230 RVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLF-SNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRE 307 (393)
T ss_pred CCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCcccee-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34554 8999987 46899999999998887642211111 223455666667778877654 5677888999999988
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------cceee--ec
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SL 390 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~~--~~ 390 (411)
.|++. ++... .+.+.++.+.+ ++......+.+.|.++||.+....+ ..+|+ ++
T Consensus 308 ~L~~~----g~~~~-~~~~~~~~i~~-------------~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~ 369 (393)
T TIGR01822 308 RMEAA----GFDIK-PADHPIIPVML-------------YDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISA 369 (393)
T ss_pred HHHHc----CCCCC-CCCCCEEEEEe-------------CCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECC
Confidence 88764 22111 12244544443 1223457899999999999974321 23554 67
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+|++++++++++|.+++++
T Consensus 370 ~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 370 AHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 88999999999999998765
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=5.2e-30 Score=242.90 Aligned_cols=335 Identities=21% Similarity=0.258 Sum_probs=237.4
Q ss_pred EEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC-CC------CCCCHHHHHHHHHHHhhCCCC
Q 015230 21 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT-SF------GAPCLLENVLAEMVISAVPSI 92 (411)
Q Consensus 21 ~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~-~~------~~~~~~~~~l~~~l~~~~~~~ 92 (411)
++.+++|.++++ +|++|+|+.++ .++|+ .+|++++++.+++.... .. .+.....+++.+.+++.++.
T Consensus 25 ~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~- 99 (385)
T PRK05958 25 PREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGA- 99 (385)
T ss_pred ccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-
Confidence 689999999996 99999999998 67898 78999999999998721 11 13466788899999988864
Q ss_pred CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHH
Q 015230 93 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSA 172 (411)
Q Consensus 93 ~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 172 (411)
++.+++++|++++..+++.. ..+++.|++ ...+|+.........|. ++..++..|+++
T Consensus 100 ~~~i~~~~g~~~~~~~l~~~--~~~gd~V~~-~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~ 157 (385)
T PRK05958 100 ERALLFSSGYAANLAVLTAL--AGKGDLIVS-DKLNHASLIDGARLSRA-------------------RVRRYPHNDVDA 157 (385)
T ss_pred CcEEEECcHHHHHHHHHHHh--CCCCCEEEE-eCccCHHHHHHHHhcCC-------------------ceEEeCCCCHHH
Confidence 55666677889888777632 334455554 45555544444333333 233344458999
Q ss_pred HHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccc--cCCCcc--
Q 015230 173 LENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEY--FGVTPD-- 245 (411)
Q Consensus 173 l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~--~~~~~d-- 245 (411)
+++.++..++++++++++++++++|...+ +++|.++|++||+++|+||+|+ ++ ..|... ... ....++
T Consensus 158 l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~i 232 (385)
T PRK05958 158 LEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDVI 232 (385)
T ss_pred HHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCceE
Confidence 99998754335778889899888898877 9999999999999999999996 32 223221 111 122344
Q ss_pred -hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHH
Q 015230 246 -LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 246 -~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~ 323 (411)
+.|+||++++ +.||+++++++.+.+......+ ..+.+.++++++++.++++.+.. +++.+++.++.+++.+.|++
T Consensus 233 ~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~ 309 (385)
T PRK05958 233 LVGTLGKALGS--SGAAVLGSETLIDYLINRARPF-IFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRA 309 (385)
T ss_pred EEEechhhccc--CCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 5689999974 3488888888887765322122 22445678888888888887765 46778888889999888887
Q ss_pred HHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Ccceeeec--CCCH
Q 015230 324 AGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHSS 394 (411)
Q Consensus 324 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~~~~~~--~~t~ 394 (411)
+ ++. ...+.|.++++.+. ......++.+.|.++||.+.+.. .+.+|+++ .+++
T Consensus 310 ~----~~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~ 371 (385)
T PRK05958 310 L----GFQ-LMDSQSAIQPLIVG-------------DNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTE 371 (385)
T ss_pred c----CCC-cCCCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCH
Confidence 5 221 12345778888762 22345689999999999998632 23577754 5799
Q ss_pred HHHHHHHHHHHHHH
Q 015230 395 DDIQHTITAAEKVL 408 (411)
Q Consensus 395 ~~i~~~i~~l~~~~ 408 (411)
+++++++++|++++
T Consensus 372 ~~i~~~l~~l~~~~ 385 (385)
T PRK05958 372 ADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999998763
No 97
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.98 E-value=1.2e-29 Score=241.48 Aligned_cols=341 Identities=23% Similarity=0.302 Sum_probs=238.4
Q ss_pred eEEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhCCC
Q 015230 20 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPS 91 (411)
Q Consensus 20 ~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~~~ 91 (411)
..+.+++|.++++.+|+.++||.++ +++|+ .+|++.+++.+.+++. ..+ .+..++++++++++++.++.
T Consensus 26 ~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~ 102 (397)
T PRK06939 26 RVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT 102 (397)
T ss_pred ccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC
Confidence 3568899999999999999999987 77899 8999999999998763 221 23467888999999998875
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHH
Q 015230 92 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS 171 (411)
Q Consensus 92 ~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 171 (411)
.+.+++|+ |++++..+++.. ..+++.|++.++.|++.... ....+. .+..++++|++
T Consensus 103 ~~~i~~ts-G~~a~~~~~~~l--~~~gd~vi~~~~~~~~~~~~-~~~~~~-------------------~~~~~~~~d~~ 159 (397)
T PRK06939 103 EDAILYSS-CFDANGGLFETL--LGKEDAIISDALNHASIIDG-VRLCKA-------------------KRYRYANNDMA 159 (397)
T ss_pred CcEEEEcC-hHHHHHHHHHHh--CCCCCEEEEEhhhhHHHHHH-HHhcCC-------------------ceEEeCCCCHH
Confidence 56666665 588999888643 45667788877777653322 222222 12233445889
Q ss_pred HHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-c-cccCccccccCC--C
Q 015230 172 ALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV--T 243 (411)
Q Consensus 172 ~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~-~g~~~~~~~~~~--~ 243 (411)
++++.+++. ..++++++++++++++|...+ +++|.++|++|+++||+||+|+ |+ . .+.. .....+. .
T Consensus 160 ~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~~-~~~~~~~~~~ 234 (397)
T PRK06939 160 DLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRG-TVEHFGVMDR 234 (397)
T ss_pred HHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCCC-HHHHcCCCCC
Confidence 999888742 225778888888888888777 9999999999999999999995 54 2 2221 2222333 3
Q ss_pred cchh--hhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHH
Q 015230 244 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 320 (411)
Q Consensus 244 ~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 320 (411)
+|++ |+||+++| +|+||+++++++++.+......+.. +.+.++..++++.++++.+.. ++++++++++.+++++.
T Consensus 235 ~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 312 (397)
T PRK06939 235 VDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLF-SNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREG 312 (397)
T ss_pred CcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccc-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4555 89999964 5899999999998888642211111 223345556667777776654 56778888888888888
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Ccceee--ecC
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SLA 391 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~~~~--~~~ 391 (411)
|+++ +... ..+.+.++++.+. ...+..++++.|.++||.+.+.. .+.+|+ +..
T Consensus 313 L~~~----~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~ 374 (397)
T PRK06939 313 MTAA----GFTL-GPGEHPIIPVMLG-------------DAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAA 374 (397)
T ss_pred HHHc----CCCc-CCCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCC
Confidence 8775 2211 1233555544431 12334789999999999987532 234676 456
Q ss_pred CCHHHHHHHHHHHHHHHHhC
Q 015230 392 HSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~~~ 411 (411)
++++++++++++|+++++++
T Consensus 375 ~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 375 HTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 89999999999999988763
No 98
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.98 E-value=2e-29 Score=238.70 Aligned_cols=340 Identities=19% Similarity=0.257 Sum_probs=236.6
Q ss_pred CCeEEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhC
Q 015230 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAV 89 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~ 89 (411)
+|..+.+++|++++ .+|++++||.++ +++|| .+|.+++++.++++.. ... .+..++++++++++++.+
T Consensus 16 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~ 91 (385)
T TIGR01825 16 SIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFK 91 (385)
T ss_pred cccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHh
Confidence 37789999999999 999999999987 77899 9999999999998752 111 234788999999999988
Q ss_pred CCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC
Q 015230 90 PSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 169 (411)
Q Consensus 90 ~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 169 (411)
+..+.+++ ++|++++..+++.+ ..+++.|++ +..+|..........+.. +..+++.|
T Consensus 92 g~~~~i~~-~sG~~a~~~a~~~~--~~~gd~vi~-~~~~~~~~~~~~~~~g~~-------------------~~~~~~~d 148 (385)
T TIGR01825 92 KTEAALVF-QSGFNTNQGVLSAL--LRKGDIVLS-DELNHASIIDGLRLTKAT-------------------KKIYKHAD 148 (385)
T ss_pred CCCcEEEE-CcHHHHHHHHHHHh--CCCCCEEEE-EccccHHHHHHHHhcCCc-------------------eEEeCCCC
Confidence 65455555 56788988887743 344555554 455554443333333321 12223448
Q ss_pred HHHHHHHHHcCC-CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc---ccccCccccccCCCcc
Q 015230 170 VSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPD 245 (411)
Q Consensus 170 ~~~l~~~~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~---~~g~~~~~~~~~~~~d 245 (411)
++++++.+++.. .++++|+++++++++|.+.+ +++|.++|++||+++|+||+|+.+ +.+. ....++++.++
T Consensus 149 ~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~ 223 (385)
T TIGR01825 149 MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDK 223 (385)
T ss_pred HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcC
Confidence 888988887542 36788899999999999888 999999999999999999999633 2232 11222333333
Q ss_pred ----hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHH
Q 015230 246 ----LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 320 (411)
Q Consensus 246 ----~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~ 320 (411)
+.||||++++ +.||+++++++++.+......+.. +...++..++++.++++.+.+ .+..++++++.+++.+.
T Consensus 224 ~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 300 (385)
T TIGR01825 224 VDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLF-STAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAG 300 (385)
T ss_pred CcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccc-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 4699999964 458888898888887632221221 223466777888888876654 45778888888888888
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC-------CCcceee--ecC
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS-------QFEAGFT--SLA 391 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~-------~~~~~~~--~~~ 391 (411)
|+++. ++.. ...+.++.+.+. ...+...+++.|.++||.+.+. +.+.+|+ ++.
T Consensus 301 L~~~g--~~~~---~~~~~~~~~~~~-------------~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~ 362 (385)
T TIGR01825 301 LGKLG--YDTG---GSETPITPVVIG-------------DEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAE 362 (385)
T ss_pred HHHcC--CCCC---CCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCC
Confidence 87752 1211 122345555441 1223467889999999998543 2234666 568
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 015230 392 HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~~ 410 (411)
++++++++++++|++++++
T Consensus 363 ~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 363 HTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999998875
No 99
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=1.9e-29 Score=239.85 Aligned_cols=321 Identities=18% Similarity=0.194 Sum_probs=220.1
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC---CC----CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG---TS----FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~---~~----~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~ 105 (411)
.|..++||.++ +|+|+ +||++++++.+++++. .. +........++.+.+++.++ .+.+++++||++|+
T Consensus 52 ~g~~~~~~~~~---~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g-~~~~~~~~sG~~An 127 (407)
T PRK07179 52 PGPDAIILQSN---DYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG-FESCLLCQSGWAAN 127 (407)
T ss_pred CCCcEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC-CCcEEEECCHHHHH
Confidence 44556677776 77777 8999999999999863 11 11123467788888888874 45678899999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..+++.+. ..++.+++ +...|..........| ..+..++++|++++++.++.. +++
T Consensus 128 ~~~l~~l~--~~g~~v~~-~~~~h~s~~~~~~~~g-------------------~~~~~~~~~d~~~l~~~l~~~--~~~ 183 (407)
T PRK07179 128 VGLLQTIA--DPNTPVYI-DFFAHMSLWEGVRAAG-------------------AQAHPFRHNDVDHLRRQIERH--GPG 183 (407)
T ss_pred HHHHHHhC--CCCCEEEE-ECCcCHHHHHHHHHCC-------------------CeEEEecCCCHHHHHHHHHhc--CCe
Confidence 99998532 23455555 4443432222111111 123445567999999999742 468
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCCC--cch--hhhhhhccCCcc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT--PDL--TTLGKIIGGGLP 258 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~~--~d~--~~~sK~~~~G~~ 258 (411)
+|+++++++++|.+.+ +++|.++|++||++||+||+|+ |. ..|.. ....+++. +|+ .|+||++++ |
T Consensus 184 lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~vdi~~~S~sK~~g~--~ 256 (407)
T PRK07179 184 IIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAG-LVAELGLTSRVHFITASLAKAFAG--R 256 (407)
T ss_pred EEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCc-hHHhcCCCCCCCEEEeechHhhhc--c
Confidence 8999999999999999 9999999999999999999997 32 23322 23344543 365 468999975 7
Q ss_pred cccccccHHHHHHhcCCC-CcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 259 VGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+|++++++++++.+.... +..+++++ ++..++++.++++.+.. ++.+++++++.+++++.|+++ ++. +.+
T Consensus 257 ~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~----g~~--v~~ 328 (407)
T PRK07179 257 AGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHANARFLREGLSEL----GYN--IRS 328 (407)
T ss_pred CeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc----CCC--CCC
Confidence 999999988877765322 12222233 34555556667777655 457788999999999999876 221 224
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEec----cC---CCcceee--ecCCCHHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PS---QFEAGFT--SLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~~---~~~~~~~--~~~~t~~~i~~~i~~l~~~ 407 (411)
.+.++++.+. .......+.+.|.++||++. |. ..+.+|+ +..+|++|+++++++|+++
T Consensus 329 ~~~i~~l~~~-------------~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 395 (407)
T PRK07179 329 ESQIIALETG-------------SERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREA 395 (407)
T ss_pred CCCEEEEEeC-------------CHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4677777662 22344678889999999743 32 1245777 4668999999999999998
Q ss_pred HHh
Q 015230 408 LRQ 410 (411)
Q Consensus 408 ~~~ 410 (411)
+++
T Consensus 396 ~~~ 398 (407)
T PRK07179 396 RDE 398 (407)
T ss_pred HHh
Confidence 775
No 100
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.97 E-value=1.1e-29 Score=238.77 Aligned_cols=330 Identities=15% Similarity=0.192 Sum_probs=226.7
Q ss_pred EeccCCccccccCC-CcHHHHHHHHHHHHc-CCC------CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHH
Q 015230 39 IDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLR 110 (411)
Q Consensus 39 ~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~-~~~------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~ 110 (411)
+||.++ +|+|+ .||++++++.+++++ +.+ +.+....+.++.+.+++.++.. +.++.++|..|+..++.
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~e-~al~~~sG~~a~~~~i~ 76 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGTE-SAILYSDGASTTSSTVA 76 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCCC-cEEEecCcHHHHHHHHH
Confidence 578888 99999 899999999999987 222 2223456788888888888644 55555567777777776
Q ss_pred HHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC----------
Q 015230 111 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---------- 180 (411)
Q Consensus 111 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---------- 180 (411)
. ...+++.|++.+..|.+.... ..+.+ ..+..++++|++++++.++..
T Consensus 77 ~--l~~~GD~Vl~~~~~h~s~~~~-~~l~~-------------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~ 134 (392)
T PLN03227 77 A--FAKRGDLLVVDRGVNEALLVG-VSLSR-------------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRK 134 (392)
T ss_pred H--hCCCCCEEEEeccccHHHHHH-HHHcC-------------------CeEEEeCCCCHHHHHHHHHHhhhhccccccc
Confidence 4 234556676666666543222 11111 235557777887777755432
Q ss_pred -CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-c-c-ccccCccccccCCCc----chhh--hh
Q 015230 181 -KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G-F-RLAYGGAQEYFGVTP----DLTT--LG 250 (411)
Q Consensus 181 -~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g-~-~~g~~~~~~~~~~~~----d~~~--~s 250 (411)
..++++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ | + +.|. +..+++++.| |+++ +|
T Consensus 135 ~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sls 209 (392)
T PLN03227 135 PTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLE 209 (392)
T ss_pred cCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeech
Confidence 125789999999999999999 9999999999999999999996 2 2 3444 5677888888 8765 55
Q ss_pred hhccCCcccccccccHHHHHHhcCCCCcccccCCCCC--HHHHHHHHHHHHH-HhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 251 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--PLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 251 K~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~--~~~~a~~~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
|+++ .+.|++++++++++.+... .+..+++.+ |+.++++.++++. ++.++++++++++.+++++.|++. .
T Consensus 210 k~~g--~~gg~v~~~~~~~~~~~~~---~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~ 282 (392)
T PLN03227 210 NAFG--SVGGMTVGSEEVVDHQRLS---GSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--S 282 (392)
T ss_pred hhhh--ccCcEEecCHHHHHHHHHh---CcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--C
Confidence 6654 3567778898888776532 233355554 7777777777755 444778899999999999999863 3
Q ss_pred cCCceEEee--------ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----------cceee
Q 015230 328 AGHAICGGY--------ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------EAGFT 388 (411)
Q Consensus 328 ~~~~~~~~~--------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----------~~~~~ 388 (411)
++...++++ .|+++.+++.+..... ..........+.+.+.++|+++.+.+. ..+|+
T Consensus 283 ~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~ 358 (392)
T PLN03227 283 HPYALKLRNRLVITSDPISPIIYLRLSDQEATR----RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRV 358 (392)
T ss_pred CccccccccccccCCCCCCCEEEEEeCCHHHhh----hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEE
Confidence 444444444 3557888874321100 001112346889999999999964321 12343
Q ss_pred --ecCCCHHHHHHHHHHHHHHHHh
Q 015230 389 --SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 389 --~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+..+|++|+++++++|++++++
T Consensus 359 ~~~~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 359 VANASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHH
Confidence 5777999999999999998875
No 101
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.97 E-value=3.3e-29 Score=219.76 Aligned_cols=352 Identities=15% Similarity=0.125 Sum_probs=256.2
Q ss_pred CCeEEEeecCcEEEecCC--CEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCCCCCCH-HHHHHHHHHHhhCC--
Q 015230 18 QPIVFDSVKGSHMWDIDG--NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSFGAPCL-LENVLAEMVISAVP-- 90 (411)
Q Consensus 18 ~~~~~~~~~g~~~~~~~g--~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~~~~~~-~~~~l~~~l~~~~~-- 90 (411)
+-++-..++.+..||..+ ..++- .|++.+.+ .+|++++|+.+.++++ .+|.+.++ +..++.+|..+.++
T Consensus 5 ~~~~~r~~t~s~KWd~~~g~~DvlP----mWVADMDf~~pp~i~~Al~~rvdhGvfGY~~~~~~~~~ai~~w~~~r~~~~ 80 (388)
T COG1168 5 DTVIERLGTNSLKWDAHPGNEDVLP----MWVADMDFPTPPEIIEALRERVDHGVFGYPYGSDELYAAIAHWFKQRHQWE 80 (388)
T ss_pred hhhhhhcCCCceeccccCCCCCcce----eeeecccCCCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 344456677788888665 33332 44566667 8999999999999997 45655444 78999999999997
Q ss_pred -CCCEEEEeCChHHHHHHHHHHHHhccC-CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 91 -SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 91 -~~~~v~~~~~g~~a~~~al~~~~~~~~-~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
.++.++|+++...++..+++ .+++ ++.|++.+|.|+ .+..+....|+.+...+.....+ -+.+
T Consensus 81 i~~e~i~~~p~VVpgi~~~I~---~~T~~gd~Vvi~tPvY~-PF~~~i~~n~R~~i~~pL~~~~~--------~y~i--- 145 (388)
T COG1168 81 IKPEWIVFVPGVVPGISLAIR---ALTKPGDGVVIQTPVYP-PFYNAIKLNGRKVIENPLVEDDG--------RYEI--- 145 (388)
T ss_pred CCcceEEEcCcchHhHHHHHH---HhCcCCCeeEecCCCch-HHHHHHhhcCcEEEeccccccCC--------cEEe---
Confidence 58899999999999999998 5554 677888888887 45555556666555544321111 1112
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc-cCccccccCCCcc-
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFGVTPD- 245 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g-~~~~~~~~~~~~d- 245 (411)
|.++||+.+... ..+..++|+|.|+.|.+++. |.|.+|.++|.|||++||+||+|+++ ..| ....+. .+.++
T Consensus 146 D~~~LE~~~~~~-~vkl~iLCnPHNP~Grvwt~--eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~ 220 (388)
T COG1168 146 DFDALEKAFVDE-RVKLFILCNPHNPTGRVWTK--EELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERF 220 (388)
T ss_pred cHHHHHHHHhcC-CccEEEEeCCCCCCCccccH--HHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhh
Confidence 899999999842 23567888888877766654 44999999999999999999999998 556 333322 22222
Q ss_pred ------hhhhhhhcc-CCcccccc-cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHH
Q 015230 246 ------LTTLGKIIG-GGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITG 315 (411)
Q Consensus 246 ------~~~~sK~~~-~G~~~g~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~ 315 (411)
+.+-||+|+ +|+..+++ +.++++.+++.+ ..........|.++..|..++++.-+. +++.+.++.+.+
T Consensus 221 a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~--~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~ 298 (388)
T COG1168 221 ADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLK--RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRD 298 (388)
T ss_pred hcceEEEeeccccccchhhhheeEEecCHHHHHHHHH--HHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 335689999 89999988 456666444432 111234667788999999999887665 888899999999
Q ss_pred HHHHHHHHHHHhcCCceEEeee-cceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccC------CCccee
Q 015230 316 ELTQGIIDAGKKAGHAICGGYI-SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPS------QFEAGF 387 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~------~~~~~~ 387 (411)
++.+.+++. .|.+....+. ..++|+++......+ .++.+.+.++ +|.+.+| +.+.+|
T Consensus 299 ~~~~~l~~~---~P~v~v~~p~gTYL~WLD~r~l~l~d------------~~l~~~ll~~akVal~~G~~FG~~g~gf~R 363 (388)
T COG1168 299 YVADFLNKH---LPGVKVTEPQGTYLAWLDCRELGLDD------------SELAEFLLEEAKVALSPGSTFGEEGSGFVR 363 (388)
T ss_pred HHHHHHHhh---CCCcEEecCCCceeeeeeccccCCCh------------HHHHHHHHHhhcEeccCCCccCcCCCceEE
Confidence 999999876 3544444444 457899997654432 5777777766 7877776 334589
Q ss_pred eecCCCHHHHHHHHHHHHHHHHh
Q 015230 388 TSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 388 ~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+++.++++-+++++++|..+++.
T Consensus 364 lN~acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 364 LNFACPRAILEEALERLKRALKK 386 (388)
T ss_pred EecCCCHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999875
No 102
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=7.3e-29 Score=236.08 Aligned_cols=328 Identities=18% Similarity=0.211 Sum_probs=228.4
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~ 105 (411)
+|+++++|.++ +++|+ +||++++++.++++.... +....+...++.+.+++.++.. +.+++++|++|+
T Consensus 44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~-~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKE-SALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCC-CEEEECcHHHHH
Confidence 46889999998 99999 899999999999987421 1123446789999999998754 455555689999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC-CCcE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEI 184 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~~ 184 (411)
..++.......+ +++|+.+..+|+.........|. ++..++++|.+++++.+++. .+++
T Consensus 120 ~~~i~~l~~~~~-g~~vi~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~t 179 (410)
T PRK13392 120 DAALSTLGKLLP-GCVILSDALNHASMIEGIRRSGA-------------------EKQVFRHNDLADLEEQLASVDPDRP 179 (410)
T ss_pred HHHHHHHhcCCC-CCEEEEehhhhHHHHHHHHHcCC-------------------eEEEEeCCCHHHHHHHHHhccCCCC
Confidence 999974322223 34556666677654443333333 23334556888888887653 2467
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCC--Ccchh--hhhhhccCCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~--~~d~~--~~sK~~~~G~ 257 (411)
++|++++++|++|.+.+ +++|.++|++|++++|+||+|+ |+ ..|... ....+. .+|++ ||||+++.
T Consensus 180 ~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~~~~~div~~tlsK~~g~-- 252 (410)
T PRK13392 180 KLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGLMDRIDMIQGTLAKAFGC-- 252 (410)
T ss_pred EEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccCCCCCcEEEEEChHhhhc--
Confidence 89999999999999988 9999999999999999999997 55 233222 223333 34654 89999984
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+.||+++++++++.++.....+.. +...++++++++.++++.++. ...+++++++.+++++.|+++. +... .+
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~---~~ 326 (410)
T PRK13392 253 LGGYIAASADLIDFVRSFAPGFIF-TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG--IPVM---PS 326 (410)
T ss_pred ccchhhcCHHHHHHHHHhCcchhc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--CCCC---CC
Confidence 237888899998877643333332 445677888888899987765 4455667888888888887752 1211 23
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC-------cceee--ecCCCHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~-------~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
.+.++.+.+. ......++.+.|+ ++||++.+..+ ..+|+ +..+|++|+++++++|.+
T Consensus 327 ~~~~~~i~~~-------------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 327 PSHIVPVMVG-------------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCEEEEEeC-------------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 4555555442 1223467888886 67999987532 24676 457899999999999999
Q ss_pred HHHhC
Q 015230 407 VLRQI 411 (411)
Q Consensus 407 ~~~~~ 411 (411)
+++++
T Consensus 394 ~~~~~ 398 (410)
T PRK13392 394 IWDRL 398 (410)
T ss_pred HHHHc
Confidence 88753
No 103
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=3.4e-28 Score=228.37 Aligned_cols=332 Identities=19% Similarity=0.236 Sum_probs=227.7
Q ss_pred EEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhCCCCC
Q 015230 22 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPSIE 93 (411)
Q Consensus 22 ~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~~~~~ 93 (411)
..++.|.++. .+|++++||.++ +++|+ .+|++++++.++++.. ..+ .+..+...++.+.+++.++..+
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~ 78 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA 78 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC
Confidence 3567889997 899999999998 78997 8899999999998762 111 1224567788888888876555
Q ss_pred EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHH
Q 015230 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 173 (411)
Q Consensus 94 ~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 173 (411)
.++++ +|++++..+++.+ ..+++.|++.++.|. .........|.+ +..++..|++++
T Consensus 79 ~i~~~-~G~~~~~~~l~~~--~~~gd~v~~~~~~~~-~~~~~~~~~g~~-------------------~~~~~~~d~~~l 135 (360)
T TIGR00858 79 ALLFS-SGYLANVGVISAL--VGKGDLILSDALNHA-SLIDGCRLSGAR-------------------VRRYRHNDVEHL 135 (360)
T ss_pred EEEEC-chHHHHHHHHHHh--CCCCCEEEEEccccH-HHHHHHHhcCCc-------------------eEEecCCCHHHH
Confidence 55555 5678887776642 344556666555544 333333333332 222333489999
Q ss_pred HHHHHcCC-CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-c-CccccccCCCcc-----
Q 015230 174 ENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-Y-GGAQEYFGVTPD----- 245 (411)
Q Consensus 174 ~~~~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~-~~~~~~~~~~~d----- 245 (411)
++.++... .++++++++++++++|...+ +++|.++|++||+++|+||+|+.+..+ . ......+++.++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 211 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQ 211 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEE
Confidence 99987542 35688888888888898888 999999999999999999999732111 1 112223334333
Q ss_pred hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHH
Q 015230 246 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 246 ~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~ 324 (411)
+.|+||++++ +.||+++++++++.+......+ ..+.+.++.+++++.++++.+.. ++++++++++.+++.+.|+++
T Consensus 212 i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 212 VGTLSKALGS--YGAYVAGSQALIDYLINRARTL-IFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred EEechhhhhc--cCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 5699999985 3489988988888775322211 11334566777777788876654 467788999999999998875
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Ccceeee--cCCCHH
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTS--LAHSSD 395 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~~~~~--~~~t~~ 395 (411)
+... ....|.++|+.+. ...+..++.+.|.++||++.++. .+.+|++ ..++++
T Consensus 289 ----~~~~-~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~ 350 (360)
T TIGR00858 289 ----GFTL-MPSCTPIVPVIIG-------------DNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPG 350 (360)
T ss_pred ----CCcc-CCCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHH
Confidence 3221 1345778888773 22334689999999999997532 2357775 456999
Q ss_pred HHHHHHHHHH
Q 015230 396 DIQHTITAAE 405 (411)
Q Consensus 396 ~i~~~i~~l~ 405 (411)
++++++++|+
T Consensus 351 ~i~~~l~~l~ 360 (360)
T TIGR00858 351 DIDRLAEALK 360 (360)
T ss_pred HHHHHHHhhC
Confidence 9999999873
No 104
>PRK07682 hypothetical protein; Validated
Probab=99.97 E-value=1.7e-28 Score=231.42 Aligned_cols=333 Identities=14% Similarity=0.085 Sum_probs=223.1
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 108 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~a 108 (411)
.+++|..+. .+++ .++.+.+++.+.++.. ..| .+..++++++++++.+.++ .++ +|++|+|+++|+..+
T Consensus 21 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 97 (378)
T PRK07682 21 GVISLGVGE--PDFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVA 97 (378)
T ss_pred CeEEeCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHH
Confidence 468888774 2333 5667888888887652 223 2446788999999988754 344 899999999999998
Q ss_pred HHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE-
Q 015230 109 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI- 187 (411)
Q Consensus 109 l~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v- 187 (411)
++.. ..+++.|++.+++|+... ......|..+..++......+. -|++++++.+.. +++++
T Consensus 98 ~~~l--~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~ 159 (378)
T PRK07682 98 MRAI--INPGDEVLIVEPSFVSYA-PLVTLAGGVPVPVATTLENEFK------------VQPAQIEAAITA---KTKAIL 159 (378)
T ss_pred HHHh--CCCCCEEEEeCCCchhhH-HHHHHcCCEEEEeecCCccCCC------------CCHHHHHhhcCc---ccEEEE
Confidence 8743 346688999999998543 3333344433333221111110 178999887763 45555
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc-ccccC---CCcchhhhhhhcc-CCccccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFG---VTPDLTTLGKIIG-GGLPVGA 261 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~-~~~~~---~~~d~~~~sK~~~-~G~~~g~ 261 (411)
+++| +|++|... +.+.+++|.++|++|++++|+||+|.++ ..+.... ....+ ....+.||||.++ +|+|+||
T Consensus 160 ~~~p-~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 160 LCSP-NNPTGAVL-NKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred EECC-CCCcCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 4555 55566544 4555999999999999999999999987 4332111 11111 2223569999999 7999999
Q ss_pred ccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc
Q 015230 262 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 339 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 339 (411)
+++++++++.+... ...+.++.+.+++.++.++++..+. +++++.++++.+++.+.|+++ +........|+
T Consensus 238 ~~~~~~~i~~l~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~p~g~~ 310 (378)
T PRK07682 238 IAAPVYFSEAMLKI---HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GLTCHVPGGAF 310 (378)
T ss_pred hhcCHHHHHHHHHH---HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CCccCCCCeeE
Confidence 99999999887632 1223456678888888877753211 344566677777777777664 33222334567
Q ss_pred eEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHHhC
Q 015230 340 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++|+.+.... .+..++.+.+. ++||.+.|+. .+.+|+++..+++++++++++|+++++++
T Consensus 311 ~~~~~~~~~~------------~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 311 YAFPSISSTG------------LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EEEEeccCCC------------CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 7777663211 11256777765 6799999873 34589998889999999999999998763
No 105
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.7e-28 Score=232.80 Aligned_cols=331 Identities=13% Similarity=0.098 Sum_probs=222.3
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC----CCCHHHHHHHHHHHhhCC---CC-CEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG----APCLLENVLAEMVISAVP---SI-EMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~----~~~~~~~~l~~~l~~~~~---~~-~~v~~~~~g~~a~ 105 (411)
.+..++||..+. .+++ .++.+++++.+.+.....++ +..++++.+++++.+..+ .+ ++|++|+|+++++
T Consensus 30 ~~~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al 106 (399)
T PRK07681 30 AGHKMIDLSIGN--PDMP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGL 106 (399)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHH
Confidence 466789998883 2222 67788999988876532232 346778899999987654 55 7999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..++++. +.+++.|++.+++|+... ......|..+..++.....++.. |++++++.+. ++++
T Consensus 107 ~~~~~~~--~~~Gd~Vlv~~P~y~~~~-~~~~~~G~~~~~v~~~~~~~~~~------------d~~~l~~~~~---~~~k 168 (399)
T PRK07681 107 VHLPMVY--ANPGDIILVPDPGYTAYE-TGIQMAGATSYYMPLKKENDFLP------------DLELIPEEIA---DKAK 168 (399)
T ss_pred HHHHHHh--CCCCCEEEECCCCccchH-HHHHhcCCEEEEEecCCCCCCcC------------CHHHHHHhcc---ccce
Confidence 9988742 346678999999998643 33445555555444322222211 7888887775 2456
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--cccccc---CCCcchhhhhhhcc-CCcc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYF---GVTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~~---~~~~d~~~~sK~~~-~G~~ 258 (411)
+++++..+|++|.+.+ .+.+++|.++|++|+++||+||+|.++ ..+.. ...... +....+.||||.++ +|+|
T Consensus 169 ~v~l~~P~NPTG~~~s-~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 247 (399)
T PRK07681 169 MMILNFPGNPVPAMAH-EDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSR 247 (399)
T ss_pred EEEEeCCCCCcCcCCC-HHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccce
Confidence 6666533555665554 444999999999999999999999977 33321 111111 12233569999998 8999
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+||+++++++++.+.... ....++.+.+++.++.++++.... ++.++.++++.+++.+.|++. ++......
T Consensus 248 iG~~i~~~~l~~~~~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~p~ 320 (399)
T PRK07681 248 IGYMIGNEEIVRALTQFK---SNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF----GWNVDKPA 320 (399)
T ss_pred eEEEecCHHHHHHHHHHH---hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCCC
Confidence 999999999988886322 223556677788877777653211 333445555556666666543 43222234
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCC------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
.|+++|+++.+. .+..++.+.+.+ +||.+.|+. .+.+|+++..+++++++++++|++
T Consensus 321 ~g~f~~~~l~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 321 GSMFVWAEIPKG-------------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred eeeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 588999988421 122567777776 799999873 235899888889999999999987
No 106
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=4.2e-28 Score=230.18 Aligned_cols=335 Identities=17% Similarity=0.132 Sum_probs=228.0
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACM 106 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~ 106 (411)
+..++||..+ .|.-..++.+++++.+.++.. ..|+ +..++++.+++++.+..+ .++ +|++|+|+++|+.
T Consensus 53 ~~~~i~l~~G---~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~ 129 (413)
T PLN00175 53 KHGAINLGQG---FPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIA 129 (413)
T ss_pred cCCeEecCCC---CCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHH
Confidence 3467898888 332225788899998888763 2332 346788899999987764 355 6999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++... +.+++.|++.+++|... .......|..+..++..... +. -|++++++.+.. ++++
T Consensus 130 ~~~~~l--~~~gd~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~~~~-~~------------~~~~~l~~~~~~---~~k~ 190 (413)
T PLN00175 130 ATILGL--INPGDEVILFAPFYDSY-EATLSMAGAKIKTVTLRPPD-FA------------VPEDELKAAFTS---KTRA 190 (413)
T ss_pred HHHHHh--CCCCCEEEEeCCCchhH-HHHHHHcCCEEEEEECCccc-CC------------CCHHHHHHhcCc---CceE
Confidence 888742 45678899999888754 33444455544443332111 10 178889888863 4666
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-cccccC---CCcchhhhhhhcc-CCcccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFG---VTPDLTTLGKIIG-GGLPVG 260 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~~~~~---~~~d~~~~sK~~~-~G~~~g 260 (411)
+++++.+|++|...+ .+.+++|.++|++|+++||+||+|.++ ..+... .....+ ....+.||||.++ +|+|+|
T Consensus 191 i~i~~p~NPtG~~~s-~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG 269 (413)
T PLN00175 191 ILINTPHNPTGKMFT-REELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIG 269 (413)
T ss_pred EEecCCCCCCCcCCC-HHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchhee
Confidence 666666666776554 556999999999999999999999877 433211 111111 2223459999999 899999
Q ss_pred cccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeec
Q 015230 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 338 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g 338 (411)
|+++++++++.+... ....+++.+.+++.++.++++..+. ++.++.++++.+.+.+.|++. ++.......|
T Consensus 270 ~~v~~~~l~~~l~~~---~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~p~g~ 342 (413)
T PLN00175 270 WAIAPPHLTWGVRQA---HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV----GFKVYPSSGT 342 (413)
T ss_pred eeEeCHHHHHHHHHH---HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCee
Confidence 999999998887632 1223567788888888877753211 445566677777777777654 4333334457
Q ss_pred ceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC---------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 339 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~---------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
+++|+++..... ....++++.|. ++||.+.|+. .+.+|++++.+++++++++++|.+++
T Consensus 343 ~f~~~~~~~~~~-----------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~ 411 (413)
T PLN00175 343 YFVMVDHTPFGF-----------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKL 411 (413)
T ss_pred EEEEEeccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHH
Confidence 788887632111 01256777776 5699999863 23589988889999999999999987
Q ss_pred Hh
Q 015230 409 RQ 410 (411)
Q Consensus 409 ~~ 410 (411)
++
T Consensus 412 ~~ 413 (413)
T PLN00175 412 KR 413 (413)
T ss_pred hC
Confidence 63
No 107
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-27 Score=225.54 Aligned_cols=334 Identities=16% Similarity=0.155 Sum_probs=220.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCC-CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRL 111 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~-~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~ 111 (411)
++..++++..+. +++ ..++.+.+++.+++.......|. ..-..++.+++++.++ .++++++|+|+++++..+++.
T Consensus 26 ~~~~~i~l~~~~--~~~-~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~ 102 (380)
T PRK06225 26 KDKEMIWMGQNT--NHL-GPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRA 102 (380)
T ss_pred hcCCeEEccCCC--CCC-CCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHH
Confidence 345688888763 333 37889999999998864222232 2234667777777777 678999999999999999975
Q ss_pred HHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC-CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE-E
Q 015230 112 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII-L 189 (411)
Q Consensus 112 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi-~ 189 (411)
. ..+++.|++.+++|+. ........|..+..++... ..+.. -|++++++.++ +++++++ +
T Consensus 103 ~--~~~gd~vl~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~~~------------~d~~~l~~~~~---~~~~~v~l~ 164 (380)
T PRK06225 103 F--LSPGDNAVTPDPGYLI-IDNFASRFGAEVIEVPIYSEECNYK------------LTPELVKENMD---ENTRLIYLI 164 (380)
T ss_pred h--cCCCCEEEEcCCCCcc-hHHHHHHhCceEEeeccccccCCcc------------CCHHHHHhhcC---CCceEEEEe
Confidence 3 3345778888988874 3334444555444433211 11111 17888888776 2455554 5
Q ss_pred cccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccc-cCCCcchhhhhhhcc-CCcccccccccHH
Q 015230 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRD 267 (411)
Q Consensus 190 ~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~-~~~~~d~~~~sK~~~-~G~~~g~~~~~~~ 267 (411)
+| +|++|...+ .+.+++|.++|++||+++|+||+|.+|..+....... .....++.||||.++ +|+|+||++++++
T Consensus 165 ~p-~NptG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~ 242 (380)
T PRK06225 165 DP-LNPLGSSYT-EEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPD 242 (380)
T ss_pred CC-CCCCCcCCC-HHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHH
Confidence 55 445565543 4459999999999999999999998772221111111 122344679999998 7999999999999
Q ss_pred HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH----HHHHHHHHHHHHHHHhcCC-ceEEeeecceEE
Q 015230 268 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN----KITGELTQGIIDAGKKAGH-AICGGYISGMFG 342 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~-~~~~~~~g~~~~ 342 (411)
+++.+... ...+++.+.++++++.++++.. ++..++++ ++.+.+.+.|+++ .+. .......|.++|
T Consensus 243 l~~~~~~~----~~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~g~~~~ 313 (380)
T PRK06225 243 LIEVVKSI----VINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDEI---EGVFLPVYPSHGNMMV 313 (380)
T ss_pred HHHHHHHH----HhcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhC---cCCccccCCCCCeEEE
Confidence 98887632 1235667888888877776532 23333333 3444444444442 121 112234577888
Q ss_pred EEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------CcceeeecCCCHHHHHHHHHHHHHHHHhC
Q 015230 343 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~~~~~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+++.... .+..++.+.|.++||.+.++. ...+|+++..+++++++++++|+++++++
T Consensus 314 ~~~~~~~------------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 314 IDISEAG------------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred EEccccc------------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 8874321 123678888999999998862 23589998889999999999999988753
No 108
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.97 E-value=5.9e-28 Score=228.43 Aligned_cols=335 Identities=13% Similarity=0.115 Sum_probs=215.4
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|+.++||..+. .+++ .++.+.+++.+.+.... .| .+..++++++++++.+.++ .++ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 577889998884 2333 57889999988876422 23 2345788899999987664 466 69999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..+++. .+.+++.|++.+|+|.... ......|..+..++.....++. .|++++++.+. .++
T Consensus 105 l~~~~~~--l~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~ 166 (388)
T PRK07366 105 TAHLPLA--VLNPGDFALLLDPGYPSHA-GGVYLAGGQIYPMPLRAENDFL------------PVFADIPTEVL---AQA 166 (388)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchH-HHHHhcCCEEEEEECCCccCCC------------CCHHHHHHhhc---ccc
Confidence 9998874 2346788999999998654 3334445544444332111111 16777766654 245
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC---ccccc--c-CCCcchhhhhhhcc-CC
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG---GAQEY--F-GVTPDLTTLGKIIG-GG 256 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~---~~~~~--~-~~~~d~~~~sK~~~-~G 256 (411)
+++++++.+|++|...+ .+.+++|.++|++|+++||+||+|..| ..+.. ..... . .....+.||||.++ +|
T Consensus 167 k~i~l~~p~NPTG~~~s-~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 167 RLMVLSYPHNPTTAIAP-LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred eEEEEeCCCCCCCccCC-HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 56666555666666554 455999999999999999999999987 43321 11111 1 11123459999997 89
Q ss_pred cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEE
Q 015230 257 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG 334 (411)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 334 (411)
+|+||+++++++++.+....... ..+..+..+.++.+++..... +++++.++++.+++.+.|+++ ++....
T Consensus 246 lRiG~~v~~~~li~~l~~~~~~~---~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~----~~~~~~ 318 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVKAVV---DFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI----GWPVPL 318 (388)
T ss_pred hhheehcCCHHHHHHHHHHHhhc---ccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccC
Confidence 99999999999988876422211 222222223333444421111 344555666666666666543 433233
Q ss_pred eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 335 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 335 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
...|+++|+++.... ..+..++.+.+ .++||.+.|+. .+.+|++++.+++++++++++|.+.
T Consensus 319 p~~g~f~~~~~~~~~-----------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPW-----------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCccc-----------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 456889999884310 00124566665 56799999972 2458998888999999999999875
Q ss_pred H
Q 015230 408 L 408 (411)
Q Consensus 408 ~ 408 (411)
+
T Consensus 388 l 388 (388)
T PRK07366 388 L 388 (388)
T ss_pred C
Confidence 3
No 109
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.2e-27 Score=226.84 Aligned_cols=338 Identities=9% Similarity=0.102 Sum_probs=219.0
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CC-CEEEEeCChHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACM 106 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~-~~v~~~~~g~~a~~ 106 (411)
...+||..+.. +++ ..++.+.+++.+.+... ..|+ +..++++.+++++.+.++ .+ ++|++|+|+++++.
T Consensus 39 ~~~i~l~~g~~-~~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDV-DAH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCC-CCC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 45678886632 112 26678899998888753 2232 346788999999998775 45 89999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.+++.. ..+++.|++.+++|++.. ......|..+..++......- .-.. -|++++++.++. ++++
T Consensus 117 ~~~~~l--~~~Gd~Vlv~~P~y~~~~-~~~~~~g~~v~~v~~~~~~~~------~~~~---~d~~~l~~~~~~---~~k~ 181 (405)
T PRK06207 117 LAVAAT--VARGDKVAIVQPDYFANR-KLVEFFEGEMVPVQLDYLSAD------KRAG---LDLDQLEEAFKA---GVRV 181 (405)
T ss_pred HHHHHh--cCCCCEEEEeCCCchhHH-HHHHHcCCEEEEEeccccCcc------cCCC---cCHHHHHHhhhh---cCeE
Confidence 988743 356788999999998644 333444554443332110000 0000 188999988863 3444
Q ss_pred -EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-cccccCC----Ccchhhhhhhcc-CCcc
Q 015230 187 -IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGV----TPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 187 -vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~~~~~~----~~d~~~~sK~~~-~G~~ 258 (411)
++++| +|++|.+.+ .+.+++|.++|++|+++||+||+|..+ ..+... ....+.. ..-+.||||.++ +|+|
T Consensus 182 v~l~~P-~NPTG~~~s-~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlR 259 (405)
T PRK06207 182 FLFSNP-NNPAGVVYS-AEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYR 259 (405)
T ss_pred EEECCC-CCCCCcCCC-HHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccc
Confidence 45555 555665554 344999999999999999999999987 444211 1111111 223558999999 8999
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh--cCChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+||+++++++++.+..... ....+.+.+++.++.++++.-. -++.+++.+++.+.+.+.|+++ .++......
T Consensus 260 iG~ii~~~~l~~~~~~~~~---~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~ 333 (405)
T PRK06207 260 LGVAFGSPAIIDRMEKLQA---IVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGV---EGVFVRAPQ 333 (405)
T ss_pred eEEEEcCHHHHHHHHHHHh---HhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC---CCceecCCC
Confidence 9999999999888863221 1234455667777766664210 0223334444444444444432 122222344
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.|+++|+++.... .+...+.+.|. ++||.+.|+. .+.+|+++..+.+++++++++|.++++
T Consensus 334 gg~fl~~~l~~~~------------~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 334 AGSYLFPRLPRLA------------VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIE 401 (405)
T ss_pred eeEEEEEeCcccC------------CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 5889999884311 11356888886 6799999974 245899988899999999999999886
Q ss_pred h
Q 015230 410 Q 410 (411)
Q Consensus 410 ~ 410 (411)
+
T Consensus 402 ~ 402 (405)
T PRK06207 402 R 402 (405)
T ss_pred H
Confidence 5
No 110
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=8.7e-28 Score=225.65 Aligned_cols=320 Identities=14% Similarity=0.153 Sum_probs=214.0
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcC----CCCC--CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSFG--APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~----~~~~--~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~ 107 (411)
..+|+..|. ++++ .+|.+++++.+.+... ..|. +..++++.+++++.+.++ .+++|++|+|+++++..
T Consensus 27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 468888773 3443 7888999998887541 1222 224577788888877654 57899999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
+++.. ..+++.|++..++|+.... .....|..+..++.....++ |++++++++++. +++++
T Consensus 104 ~~~~~--~~~gd~v~v~~P~y~~~~~-~~~~~g~~~~~~~~~~~~~~--------------d~~~l~~~~~~~--~~~~i 164 (368)
T PRK03317 104 LLQAF--GGPGRTALGFVPSYSMHPI-IARGTHTEWVEGPRAADFTL--------------DVDAAVAAIAEH--RPDVV 164 (368)
T ss_pred HHHHh--cCCCCEEEEeCCChHHHHH-HHHhcCCeeEEcccCCCCCC--------------CHHHHHHHHhcc--CCCEE
Confidence 98843 3456789999999986433 33333332222211111111 889999888743 34455
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchh---hhhhhcc-CCcccccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAY 262 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~---~~sK~~~-~G~~~g~~ 262 (411)
+++..+|++|.+.+ .+++.++|+.++++||+||+|++| +.+........+..++++ ||||+++ +|+|+||+
T Consensus 165 ~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 240 (368)
T PRK03317 165 FLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL 240 (368)
T ss_pred EEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhh
Confidence 55555677888887 778888888889999999999988 555333333333345544 9999998 79999999
Q ss_pred cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceE
Q 015230 263 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 341 (411)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 341 (411)
++++++++.+.... .++..++++++++.++++.... .+.+++++++.+++.+.|++ .++.. ..+.|.++
T Consensus 241 ~~~~~~~~~l~~~~-----~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~-~~~~~~~~ 310 (368)
T PRK03317 241 AAAPAVVDALRLVR-----LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE----LGLRV-APSDANFV 310 (368)
T ss_pred hCCHHHHHHHHhcC-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCEe-CCCCCcEE
Confidence 99999999887422 3567788999988888764322 22233444444455554443 24322 22334443
Q ss_pred EE-EEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 342 GF-FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 342 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
++ .+. +...+.+.|.++||++.+.+. +.+|+++. +.+++++++++|+++++
T Consensus 311 ~~~~~~----------------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~-~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 311 LFGRFA----------------DRHAVWQGLLDRGVLIRDVGIPGWLRVTIG-TPEENDAFLAALAEVLA 363 (368)
T ss_pred EEeccC----------------CHHHHHHHHHHCCEEEEeCCCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 33 321 126788999999999988653 56888865 67889999999998865
No 111
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=1.3e-27 Score=226.03 Aligned_cols=332 Identities=14% Similarity=0.102 Sum_probs=217.5
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.+..++||..+ ++....+|.+.+++.+.+.... .| .+..++++++++++.+.++ .++ +|++|+|++++
T Consensus 30 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~ 106 (389)
T PRK08068 30 EGHDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAG 106 (389)
T ss_pred cCCCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHH
Confidence 45668999888 5544467889999988877532 23 2346788899998876654 456 79999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..++.. ...+++.|++.+++|..... .....|..+..++.....++.. |++++++.+.. ++
T Consensus 107 l~~~~~~--~~~~gd~vlv~~P~y~~~~~-~~~~~g~~~~~i~~~~~~~~~~------------d~~~l~~~~~~---~~ 168 (389)
T PRK08068 107 LVELPQC--LMNPGDTILVPDPGYPDYLS-GVALARAQFETMPLIAENNFLP------------DYTKIPEEVAE---KA 168 (389)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchHH-HHHhcCCEEEEeecccccCCCC------------CHHHHHHhccc---cc
Confidence 9987763 23466789999999975433 3444555444444322222211 78888877752 34
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc-cC-ccccccC---CCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YG-GAQEYFG---VTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g-~~-~~~~~~~---~~~d~~~~sK~~~-~G~ 257 (411)
++++++..+|++|.+.+ .+.+++|.++|++|++++|+||+|..+ ..+ .. ......+ ....+.||||.|+ +|+
T Consensus 169 ~~v~l~~P~NPTG~~~s-~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl 247 (389)
T PRK08068 169 KLMYLNYPNNPTGAVAT-KAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW 247 (389)
T ss_pred eEEEEECCCCCCCCcCC-HHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence 55554433455665544 444999999999999999999999876 333 11 1111111 2233569999997 899
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+......+ ..+.++..+.++.+++..... +++++.++++.+++.+.|+++ ++.....
T Consensus 248 RiG~~~~~~~l~~~l~~~~~~~---~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----g~~~~~~ 320 (389)
T PRK08068 248 RVAFAVGNESVIEAINLLQDHL---FVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI----GWEVDAP 320 (389)
T ss_pred eeEeEecCHHHHHHHHHHHhhc---cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCC
Confidence 9999999999988886422221 223334445555555431111 445666677777777776654 4322233
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
..|+++|+.+.+. .+..++.+.|.+ +||.+.++. .+.+|+++..+++.+.+++++|.++
T Consensus 321 ~g~~~~~v~~~~~-------------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 386 (389)
T PRK08068 321 KGSFFAWMPVPKG-------------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGKL 386 (389)
T ss_pred CeeEEEEEECCCC-------------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHHh
Confidence 4467789988431 123678888886 599998863 3468998888888999999998764
No 112
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.96 E-value=2.1e-28 Score=216.88 Aligned_cols=332 Identities=17% Similarity=0.145 Sum_probs=218.7
Q ss_pred CcHHHHHHHHHHHHcCCC-----CCCCCHHHHHHHHHHHhhCC----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEE
Q 015230 53 ADDQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 123 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~-----~~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~ 123 (411)
.+.-+.+++.++++.... ..+.++++..|++.+++.++ ..++|++|+|+.+++..++.. .+..++.||+
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~--l~~~GDeVii 122 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLG--LLNPGDEVIV 122 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHH--HcCCCCEEEE
Confidence 445577777777776321 22458889999999999665 467899999999999988874 4678899999
Q ss_pred EeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCH
Q 015230 124 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 203 (411)
Q Consensus 124 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~ 203 (411)
++|.|.+......++++.++..-.. ...+-.. ...+. .|.+.++..+. +++++|+++..+|++|.+.+ +
T Consensus 123 ~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~~~---s~~~~---~D~~~le~~~t---~kTk~Ii~ntPhNPtGkvfs-R 191 (420)
T KOG0257|consen 123 FEPFFDCYIPQVVMAGGTPVFVPLK-PKEGNVS---SSDWT---LDPEELESKIT---EKTKAIILNTPHNPTGKVFS-R 191 (420)
T ss_pred ecCcchhhhhHHhhcCCcceeeccc-ccccccc---Ccccc---CChHHHHhhcc---CCccEEEEeCCCCCcCcccC-H
Confidence 9999998887777777765444222 1111100 01111 28999999988 46777777776667776655 5
Q ss_pred HHHHHHHHHHHHhCCEEEEecccccc-cccc---Ccccc--ccCCCcchhhhhhhcc-CCcccccccccHHHHHHhcCCC
Q 015230 204 DFLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQE--YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG 276 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li~De~~~g~-~~g~---~~~~~--~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~~ 276 (411)
++|++|+++|++||+++|+||+|.-+ ..+. .++.. .+.+...+.|+||+|+ .|||+||+++++.++.......
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh 271 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVH 271 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHHHh
Confidence 55999999999999999999999755 4442 22221 2233455679999999 6999999999888887766433
Q ss_pred CcccccCCCCCHHHHHHHHHHHHHH---hc-------CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 277 PMYQAGTLSGNPLAMTAGIHTLKRL---KE-------PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 277 ~~~~~~t~~~~~~~~a~~~~~l~~~---~~-------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
... .++.+...+.|..+++..- .+ .++.+.++++.+.+.+.|.++ +........+.++|.++.
T Consensus 272 ~~~---~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 272 QNF---VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWADFS 344 (420)
T ss_pred hcc---ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEecc
Confidence 222 2333333333333333211 11 336677888888888888887 444344556889999987
Q ss_pred cCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCCCc-----------ceeeecCCCHHHHHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQFE-----------AGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~-----------~~~~~~~~t~~~i~~~i~~l~ 405 (411)
....-++......+..+. ++.+.+ .+.|+.+-|.... .+|+.++-+++.+++++++|+
T Consensus 345 ~~~~~~~~~~~~~~~~d~-~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 345 LAKSWPFFEEILEKPDDF-KFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred ccccCCcchhhccCCCce-eeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 221111111111122233 344444 5569988886421 245677888999999999998
No 113
>PLN02483 serine palmitoyltransferase
Probab=99.96 E-value=1.2e-26 Score=223.41 Aligned_cols=326 Identities=19% Similarity=0.218 Sum_probs=222.1
Q ss_pred CCCEEEeccCCccccccCCC--cHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHA--DDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~--~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a 104 (411)
++++.+||.|+ +++|+. ++.+.+++.+++++. ... .+.....+++.+.+++.++..+.++++ +|..+
T Consensus 98 ~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~-~G~~a 173 (489)
T PLN02483 98 KTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFG-MGYAT 173 (489)
T ss_pred CCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEEC-CHHHH
Confidence 56889999999 999993 677888888888773 211 234777888999999888755566665 57777
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC----
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---- 180 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---- 180 (411)
+..++.. ...+++.|++.++.|++.. ......| ..+..++++|++++++.+++.
T Consensus 174 n~~~i~a--l~~~Gd~Vi~d~~~h~s~~-~~~~~~G-------------------a~v~~~~~~d~~~le~~l~~~i~~~ 231 (489)
T PLN02483 174 NSTIIPA--LIGKGGLIISDSLNHNSIV-NGARGSG-------------------ATIRVFQHNTPSHLEEVLREQIAEG 231 (489)
T ss_pred HHHHHHH--hCCCCCEEEEcchhhHHHH-HHHHHcC-------------------CeEEEEeCCCHHHHHHHHHhhhhcc
Confidence 7776663 2345566666666665532 2222222 346667778888888877631
Q ss_pred ------CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccCCCc---ch--
Q 015230 181 ------KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVTP---DL-- 246 (411)
Q Consensus 181 ------~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~~~~---d~-- 246 (411)
+.+..+|+++++.++.|.+.+ +++|.++|++||++||+||+|+ |. .+|. ...+++++.| |+
T Consensus 232 ~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~-g~~~~~~v~~~~~dI~~ 306 (489)
T PLN02483 232 QPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR-GVCELLGVDPADVDIMM 306 (489)
T ss_pred ccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCC-chHHhcCCCcccCcEEE
Confidence 122458889999999999998 9999999999999999999996 32 2332 2334444432 44
Q ss_pred hhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-------CChHHHHHHHHHHHHH
Q 015230 247 TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-------PGTYEYLNKITGELTQ 319 (411)
Q Consensus 247 ~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-------~~~~~~~~~~~~~~~~ 319 (411)
.||||++++ +.||+++++++++.+......... ....++..++++.++++.+.. .+.+++++++.+++++
T Consensus 307 ~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~-~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~ 383 (489)
T PLN02483 307 GTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLY-ATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRS 383 (489)
T ss_pred Eecchhccc--CceEEEcCHHHHHHHHHhCccccc-cCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHH
Confidence 499999984 348999999999988743221111 223455666667777876542 2356778888888888
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------cceee--ec
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SL 390 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~~--~~ 390 (411)
.|+++ ++.......+.++++.+.. ......+.+.|.++||.+.+.++ ..+|+ +.
T Consensus 384 ~L~~~----G~~v~~~~~sp~~~l~l~~-------------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa 446 (489)
T PLN02483 384 ELQKM----GFEVLGDNDSPVMPIMLYN-------------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISA 446 (489)
T ss_pred HHHHC----CCcccCCCCCCEEEEEECC-------------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCC
Confidence 88876 2211112234566665521 22346788999999999986543 23455 56
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+|++++++++++|+++++.
T Consensus 447 ~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 447 SHSREDLIKALEVISEVGDL 466 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999998764
No 114
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=2.1e-27 Score=227.41 Aligned_cols=327 Identities=13% Similarity=0.094 Sum_probs=216.1
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
.++||.++ .+..-..|.+.+++.+.+.....|+ +..++++.+++++....+..++|++|+|+++++..+++..
T Consensus 86 ~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l- 161 (431)
T PRK15481 86 PLHDLAGG---NPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAH- 161 (431)
T ss_pred hhhhhhcC---CCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHh-
Confidence 35666666 3333244667777766555432333 2356777777777654444579999999999999998742
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcc-c
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP-V 192 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~-~ 192 (411)
..+++.|++.+|+|+... ......|..+..++.. ..++ |++.++++++. +++++++.| .
T Consensus 162 -~~pgd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~-~~g~--------------~~~~l~~~~~~---~~k~i~~~p~p 221 (431)
T PRK15481 162 -LLPGDSVAVEDPCFLSSI-NMLRYAGFSASPVSVD-AEGM--------------QPEKLERALAQ---GARAVILTPRA 221 (431)
T ss_pred -CCCCCEEEEeCCCcHHHH-HHHHHcCCeEEeeccC-CCCC--------------CHHHHHHHHhc---CCCEEEECCCC
Confidence 345678999999988643 3344445544444332 1222 78999988863 456666664 3
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHh-CCEEEEecccccc-ccccCccccc-cCCCcchhhhhhhccCCcccccccccHHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGAQEY-FGVTPDLTTLGKIIGGGLPVGAYGGRRDIM 269 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~-~~~li~De~~~g~-~~g~~~~~~~-~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~ 269 (411)
+|++|...+ .+.+++|.++|++| +++||+||+|..| ..+....... .+...-+.||||.+++|+|+||++++++++
T Consensus 222 ~NPTG~~~s-~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~ 300 (431)
T PRK15481 222 HNPTGCSLS-ARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDSATS 300 (431)
T ss_pred CCCCCccCC-HHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHH
Confidence 344555544 55599999999999 9999999999877 3321111111 111223559999999999999999999988
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
+.+.... ...++..+.+++.++.++++.-.. +++++.++++.+.+.+.|++. ++.......|+++|+++
T Consensus 301 ~~~~~~~---~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~----~~~~~~p~gg~f~~~~l 373 (431)
T PRK15481 301 ARLRLRL---NSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY----GIAIPSPGDGLNLWLPL 373 (431)
T ss_pred HHHHHHH---hccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc----CCccccCCCeEEEEEEC
Confidence 8875311 122345678888888888753110 234555666666666666554 43332355689999988
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------cceeeecC-CCHHHHHHHHHHHHHHHHh
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTSLA-HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~~~~~-~t~~~i~~~i~~l~~~~~~ 410 (411)
... ..++.+.|.++||.+.|+.. +.+|++++ .+++++++++++|.+++++
T Consensus 374 ~~~---------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~~ 431 (431)
T PRK15481 374 DTD---------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALNR 431 (431)
T ss_pred CCC---------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhcC
Confidence 421 25788888899999999631 24788766 4789999999999998763
No 115
>PRK07324 transaminase; Validated
Probab=99.96 E-value=8e-28 Score=225.64 Aligned_cols=338 Identities=14% Similarity=0.127 Sum_probs=216.5
Q ss_pred EEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHH
Q 015230 30 MWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 105 (411)
Q Consensus 30 ~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~ 105 (411)
-++..|..++++..+ .+.-..++.+ +++.+++... ..|+ +..++++.+++++.. -.+++|++|+|+++|+
T Consensus 20 ~~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~--~~~~~vi~t~G~~~al 93 (373)
T PRK07324 20 TYDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQN--VKPENILQTNGATGAN 93 (373)
T ss_pred ccccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhcC--CChhhEEEcCChHHHH
Confidence 355667777777666 4443356667 8888888773 2332 234455555555421 1578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..++... ..+++.|++..++|.... ......|..+..++.....++.. |++++++.++ ++++
T Consensus 94 ~~~~~~l--~~~gd~Vl~~~P~y~~~~-~~~~~~g~~v~~v~~~~~~~~~~------------d~~~l~~~~~---~~~k 155 (373)
T PRK07324 94 FLVLYAL--VEPGDHVISVYPTYQQLY-DIPESLGAEVDYWQLKEENGWLP------------DLDELRRLVR---PNTK 155 (373)
T ss_pred HHHHHHh--CCCCCEEEEcCCCchhHH-HHHHHcCCEEEEEecccccCCCC------------CHHHHHHhCC---CCCc
Confidence 9988743 456678999888887543 33344455444444322222211 7888887765 3566
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-CccccccCCCcchhhhhhhcc-CCcccccc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIG-GGLPVGAY 262 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~ 262 (411)
+++++..+|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+. ....+..+....+.||||.++ +|+|+||+
T Consensus 156 li~i~~p~NPtG~~~~-~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i 234 (373)
T PRK07324 156 LICINNANNPTGALMD-RAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWI 234 (373)
T ss_pred EEEEeCCCCCCCCCCC-HHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEE
Confidence 7777666666776654 445999999999999999999999987 4332 111222222234569999999 79999999
Q ss_pred cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ecceE
Q 015230 263 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMF 341 (411)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~ 341 (411)
++++++++.+.... ...+.+.+.+++.++..+++.. +++.++.++..+..++.+.+.....+......+ .|+++
T Consensus 235 ~~~~~li~~~~~~~---~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~ 309 (373)
T PRK07324 235 AANEEVIDILRKYR---DYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTS 309 (373)
T ss_pred ecCHHHHHHHHHHh---CcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEE
Confidence 99999988887422 2335566778887777766422 223333333333333333333333343322333 35566
Q ss_pred EEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 342 GFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
|+.+... .+..++++.| .++||.+.|+. .+.+|+++..+++.+++++++|++++++
T Consensus 310 ~i~~~~~-------------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 310 FVKLDVD-------------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEEeCCC-------------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 6666321 1125677775 56799999985 2468999888999999999999998864
No 116
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.6e-27 Score=224.20 Aligned_cols=343 Identities=14% Similarity=0.067 Sum_probs=222.1
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CC--CCCCHHHHHHHHHHHhhCC----CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF--GAPCLLENVLAEMVISAVP----SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~--~~~~~~~~~l~~~l~~~~~----~~~-~v~~~~~g~~a 104 (411)
.|+.++|+.++. .+++ .++.+.+++.+.+.... .| .+..++++.+++++.+.++ .++ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 467789999884 3333 67778888887765421 12 2456788899999887654 244 79999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..++.. ....++.|++..++|.+. .......|..+..++.....++. .|++++++.+.. ++
T Consensus 119 l~~~~~~--~~~~gd~Vlv~~P~y~~~-~~~~~~~g~~v~~v~~~~~~~~~------------~d~~~l~~~~~~---~~ 180 (410)
T PRK06290 119 LAMLPSC--FINPGDVTLMTVPGYPVT-GTHTKYYGGEVYNLPLLEENNFL------------PDLDSIPKDIKE---KA 180 (410)
T ss_pred HHHHHHH--hCCCCCEEEEeCCCCccH-HHHHHHcCCEEEEEecCCCcCCc------------CCHHHHHHhhcc---cc
Confidence 9998874 234667899999999864 33344455554444432111111 178888877752 45
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-cccccc---CCCcchhhhhhhcc-CCcc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF---GVTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~---~~~~d~~~~sK~~~-~G~~ 258 (411)
++++++..+|++|.+.+ .+.+++|.++|++|+++||+||+|.++ ..+.. ...... +....+.||||.++ +|+|
T Consensus 181 k~i~l~nP~NPTG~v~s-~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 181 KLLYLNYPNNPTGAVAT-KEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred eEEEEECCCCCCCcCCC-HHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 66666644556666554 444999999999999999999999877 33321 111111 12233569999997 7999
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
+||+++++++++.+.... .....+.+.+++.++.++++..+. ++.+++++++.+++.+.|++. ++.......
T Consensus 260 iG~ii~~~~l~~~l~~~~---~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~p~g 332 (410)
T PRK06290 260 LAFVVGNELIVKAFATVK---DNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV----GFKAEMPGG 332 (410)
T ss_pred eEeEEeCHHHHHHHHHHH---hccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCe
Confidence 999999999988876322 112334445677777666643111 345556666666666666654 433233345
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC-eEeccCCC--cceeeecC---CCHHHHHHHHHHHHHHHHhC
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPSQF--EAGFTSLA---HSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-i~v~~~~~--~~~~~~~~---~t~~~i~~~i~~l~~~~~~~ 411 (411)
|+++|+.+.+...+.. ...+..++++.|.++| +.+.|+.. ..+|++++ .++++.+++++.|++.|.++
T Consensus 333 ~f~l~v~lp~~~~~~~------~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 333 TFYLYVKAPKGTKSGI------KFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred eeEEEEECCCccccCC------CCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 7778888753211000 0012467889998885 55556532 25888766 58899999999999998764
No 117
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.96 E-value=8e-27 Score=196.26 Aligned_cols=335 Identities=20% Similarity=0.266 Sum_probs=232.5
Q ss_pred CeEEEeecCcEEEecCC--CEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhh
Q 015230 19 PIVFDSVKGSHMWDIDG--NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISA 88 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g--~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~ 88 (411)
.-++.+.+|+.+. .+| +.+++|.+| +|+|+ +||++.++-.++++.. .+. .++...+..|...+++.
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 3466777777776 444 578999999 99999 9999999999999982 211 35677888888888777
Q ss_pred CCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 89 VPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 89 ~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
. +.++.++.+++-.|+..++... .++.+. +..+.-.|........+. .+..|-
T Consensus 125 h-~rED~ilypscfdANag~feai--l~pedA-vfSDeLNhASIIdGirLc-----------------------kry~h~ 177 (417)
T KOG1359|consen 125 H-GREDTILYPSCFDANAGAFEAI--LTPEDA-VFSDELNHASIIDGIRLC-----------------------KRYRHV 177 (417)
T ss_pred h-CCCceEEeccccccchHHHHHh--cChhhh-hhccccccchhhhhhHHH-----------------------hhhccc
Confidence 7 6777888888999998888632 233333 333444454321111111 122233
Q ss_pred CHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCC--C
Q 015230 169 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGV--T 243 (411)
Q Consensus 169 d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~--~ 243 (411)
|+-+++..+.. .+.+.++|..+.++++.|.+.| +++|.++++|||.+|++||+|+ || .......-+.+++ +
T Consensus 178 dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~ 253 (417)
T KOG1359|consen 178 DVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGD 253 (417)
T ss_pred hhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCc
Confidence 67777755543 3357889999999999999999 9999999999999999999996 77 3223344455664 4
Q ss_pred cchh--hhhhhccCCcccccccccHHHHHHhcCCC-CcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHH
Q 015230 244 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 319 (411)
Q Consensus 244 ~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 319 (411)
+|++ |++|+++| ---||..+++.++..+++.. ++.++++.++..+. .+.++++.+.. .+..+..+.+.+++++
T Consensus 254 vdiinsTLgKAlGg-a~GGyttgp~~li~llrqr~RpylFSnslppavV~--~a~ka~dllm~s~~~i~~~~a~~qrfr~ 330 (417)
T KOG1359|consen 254 VDIINSTLGKALGG-ASGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVG--MAAKAYDLLMVSSKEIQSRQANTQRFRE 330 (417)
T ss_pred ceehhhhhhhhhcC-CCCCCccCChhHHHHHHhcCCceeecCCCChhhhh--hhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 6654 89999984 13567899999999998644 44444444444444 44455655444 7778888899999988
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc-------ee--eec
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GF--TSL 390 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~-------~~--~~~ 390 (411)
..+..... +. ...-.+..+.+ ++...+.+.++.|+++||+|-...++. +| ++.
T Consensus 331 ~me~aGft--Is---g~~hPI~pv~l-------------Gda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSA 392 (417)
T KOG1359|consen 331 FMEAAGFT--IS---GASHPICPVML-------------GDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISA 392 (417)
T ss_pred HHHhcCce--ec---CCCCCccceec-------------ccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEeh
Confidence 88765211 11 01112333333 556677889999999999996665443 33 479
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 015230 391 AHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~ 409 (411)
.+|+|+||++++++.++.+
T Consensus 393 aHt~edid~~i~Af~~vgr 411 (417)
T KOG1359|consen 393 AHTEEDIDRLIEAFSEVGR 411 (417)
T ss_pred hcCHHHHHHHHHHHHHHHH
Confidence 9999999999999998865
No 118
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=2.8e-27 Score=223.64 Aligned_cols=331 Identities=14% Similarity=0.106 Sum_probs=215.8
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|..++|+..+ .+.-..++.+.+++.+.+... ..|. +..++++.+++++.+.++ .++ .+++|+|++++
T Consensus 29 ~~~~~i~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~ 105 (385)
T PRK09276 29 RGVDVISLGIG---DPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEG 105 (385)
T ss_pred cCCCEEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 45668999888 332225778899998887652 1232 235788899999887654 355 58899999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..+++.. ..+++.|++.+++|... .......|..+..++.....++.. |++++++.+. +++
T Consensus 106 i~~~~~~~--~~~gd~Vl~~~P~y~~~-~~~~~~~g~~~~~v~~~~~~g~~~------------d~~~l~~~~~---~~~ 167 (385)
T PRK09276 106 IAHIPLAF--VNPGDVVLVPDPGYPVY-KIGTIFAGGEPYFMPLKEENGFLP------------DLDAIPEDVA---KKA 167 (385)
T ss_pred HHHHHHHh--CCCCCEEEEcCCCCcCh-HHHHHHcCCEEEEEecCCCCCCcC------------CHHHHHHhcc---ccc
Confidence 99988743 34667899999998754 333444555444443322222211 7888877665 245
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--c--cccc-cCCCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--G--AQEY-FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~--~~~~-~~~~~d~~~~sK~~~-~G~ 257 (411)
+++++++.+|++|.+.+ .+.+++|.++|++|+++||+||+|.++ ..+.. . ..+. .+....+.||||.++ +|+
T Consensus 168 ~~v~l~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~Gl 246 (385)
T PRK09276 168 KLMFINYPNNPTGAVAD-LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGW 246 (385)
T ss_pred eEEEEeCCCCCCCCCCC-HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcch
Confidence 66666644566666554 445999999999999999999999877 33311 1 1111 122344669999997 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+..... ....+.+++.+.++.++++.... +++++.++++.+++.+.|++. ++.....
T Consensus 247 RiG~~i~~~~l~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~ 319 (385)
T PRK09276 247 RIGFAVGNADLIAGLGKVKS---NVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL----GLEVEPP 319 (385)
T ss_pred hheeeeCCHHHHHHHHHHHh---hccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCC
Confidence 99999999999888764221 11233455666666666642111 344455555566666666553 3322223
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
..|+++|+++... .+..++.+.|. ++||.+.++. .+.+|++++.+++++.+++++|.+
T Consensus 320 ~~~~~~~v~~~~~-------------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 320 KATFYVWAPVPKG-------------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred CcceEEEEECCCC-------------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 3466788887421 12356777775 5799999973 246899888889999999988864
No 119
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.2e-27 Score=205.78 Aligned_cols=341 Identities=13% Similarity=0.063 Sum_probs=236.3
Q ss_pred CEEEeccCCccccccCC-CcHHHHHHHHHHHHcCCCCCCC-----CHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFGAP-----CLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 106 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~~~~~-----~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~ 106 (411)
+.++-+..+-.+.+-.+ ..++..+|+.+++..+...+|. ...++++++.+.+.++ .+++|++|.|+++|++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe 140 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIE 140 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHH
Confidence 46777777744333444 7788999999999997655443 5667888888887776 5899999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++.++ ..++..|++..|+|+ +++.-..-.+-+++++..-...++ .+ |++.+|.+++++ ..++
T Consensus 141 ~~i~~L--A~p~aNILlPrPGfp-~Y~~~a~~~~lEVR~ydlLPe~~w---------eI---DL~~veal~DEN--T~Ai 203 (447)
T KOG0259|consen 141 LAISSL--ANPGANILLPRPGFP-LYDTRAIYSGLEVRYYDLLPEKDW---------EI---DLDGVEALADEN--TVAI 203 (447)
T ss_pred HHHHHh--cCCCCceecCCCCCc-hHHHhhhhcCceeEeecccCcccc---------ee---chHHHHHhhccC--eeEE
Confidence 999854 256678999999997 444444444555655433111111 11 899999999854 6788
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc-cCccccccC-CCcch--hhhhh-hccCCcccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFG-VTPDL--TTLGK-IIGGGLPVG 260 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g-~~~~~~~~~-~~~d~--~~~sK-~~~~G~~~g 260 (411)
+++||.|+.|+++.... |++|+++|+|+|+++|.||+|..+ ..+ ++..+..+. +.|-+ .++|| |+-.|||+|
T Consensus 204 vviNP~NPcGnVys~~H--L~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlG 281 (447)
T KOG0259|consen 204 VVINPNNPCGNVYSEDH--LKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLG 281 (447)
T ss_pred EEeCCCCCCcccccHHH--HHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceee
Confidence 99999999998887766 999999999999999999999877 444 333444443 34543 47899 556999999
Q ss_pred cccccH--------HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcC
Q 015230 261 AYGGRR--------DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG 329 (411)
Q Consensus 261 ~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (411)
|++.+. ..++.+.+ +...+..++.+.++|.-..|+...+ +....-++.+.....++|+++ |
T Consensus 282 Wi~~hD~~gvf~~~~~~q~~~~----~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~I----P 353 (447)
T KOG0259|consen 282 WIALHDPRGVFRDTKVVQGIKN----FLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDI----P 353 (447)
T ss_pred eEEEecccccccchHHHHHHHH----HHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHHhcC----C
Confidence 997642 12223321 1223556677777777666654332 344556777777778888776 5
Q ss_pred Cce-EEeeecc-eEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHH
Q 015230 330 HAI-CGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITA 403 (411)
Q Consensus 330 ~~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~ 403 (411)
... .+++.|. ++|+.+.-.... .-.++.+...+..+|+.+++.||. .+.+|+.+....+.++++.+|
T Consensus 354 ~l~cp~kPeg~mylmv~l~~s~~~-------~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~R 426 (447)
T KOG0259|consen 354 CLTCPVKPEGCMYLMVKLNLSLFP-------DIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSR 426 (447)
T ss_pred CcccCcCCCcceEEEeccchhhhc-------cccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHH
Confidence 443 5566665 455544211111 223344555666678899999984 456899999999999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|++.+.+
T Consensus 427 ik~Fc~R 433 (447)
T KOG0259|consen 427 IKEFCDR 433 (447)
T ss_pred HHHHHHh
Confidence 9988754
No 120
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.5e-27 Score=223.18 Aligned_cols=341 Identities=16% Similarity=0.122 Sum_probs=216.4
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.+..++||..+ .+....++.+.+++.+.+... ..| .+...+++.+++++.+.++ .++ +|++|+|++++
T Consensus 31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 45678999887 555445666778777766542 223 2345688999999987754 456 79999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHH----HHHHHHHcC
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS----ALENLFENN 180 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~l~~~~~~~ 180 (411)
+..+++.. ..+++.|++.+|+|...... ....|..+..++.....+.. + |++ .+++++++.
T Consensus 108 l~~~~~~l--~~~gd~Vlv~~P~y~~~~~~-~~~~g~~~~~v~~~~~~~~~---------~---d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQAI--TNPGDVAIVPDPAYPIHSQA-FILAGGNVHKMPLEYNEDFE---------L---DEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHHh--CCCCCEEEEcCCCCcchHHH-HHhcCCEEEEEeccccccCc---------c---ChhhhhhHHHHHHhhc
Confidence 99998842 35678899999999865433 44455544443332111110 0 444 456666654
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC----cccccc-CCCcchhhhhhhcc
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG----GAQEYF-GVTPDLTTLGKIIG 254 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~----~~~~~~-~~~~d~~~~sK~~~ 254 (411)
..++++++++..+|++|.+.+ .+.+++|.++|++|+++||+||+|..+ ..+.. ...+.. +....+.||||.++
T Consensus 173 ~~~~~~i~~~~P~NPTG~~~s-~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 173 SPKPKYVVVNFPHNPTTATVE-KSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred cCCceEEEEeCCCCCCCccCC-HHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccC
Confidence 345666555543445554444 344999999999999999999999877 33311 111111 12223458999997
Q ss_pred -CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015230 255 -GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA 331 (411)
Q Consensus 255 -~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (411)
+|+|+||+++++++++.+.... ....++.+.+++.++..+++.... +++++.++++.+.+.+.|++. ++.
T Consensus 252 ~~GlRiG~iv~~~~li~~~~~~~---~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~ 324 (403)
T PRK08636 252 MAGWRVGFVVGNKKLVGALKKIK---SWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA----GWE 324 (403)
T ss_pred CccceeeeeeCCHHHHHHHHHHH---HHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCc
Confidence 8999999999999988876321 111234445555555544431111 233444555555555555542 432
Q ss_pred eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHH-HHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHH
Q 015230 332 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAA 404 (411)
Q Consensus 332 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l 404 (411)
......|+++|+.+.+.. ......++.+. +.++||.+.|+. .+.+|+++..+++++++++++|
T Consensus 325 ~~~p~~g~~~~~~l~~~~----------~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl 394 (403)
T PRK08636 325 LQKPRASMFVWAKIPEPA----------RHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNI 394 (403)
T ss_pred ccCCCcceEEEEECCCcc----------CCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHH
Confidence 223456889999884320 00112566665 456799999973 2458998888999999999999
Q ss_pred HHHHHh
Q 015230 405 EKVLRQ 410 (411)
Q Consensus 405 ~~~~~~ 410 (411)
+++++.
T Consensus 395 ~~~l~~ 400 (403)
T PRK08636 395 KKFLKE 400 (403)
T ss_pred HHHHHh
Confidence 998865
No 121
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.96 E-value=3.2e-27 Score=223.15 Aligned_cols=331 Identities=14% Similarity=0.114 Sum_probs=218.5
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|..++||..+. ..++ .++.+.+++.+.+... ..|+ +..++++.+++++.+.++ ..+ +|++|+|++++
T Consensus 27 ~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~ 103 (383)
T TIGR03540 27 EGVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG 103 (383)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence 467789999883 2233 5778899998877642 2232 235788899999987654 344 68999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..+++.. ..+++.|++.+++|+... ......|..+..++.....++.. |++++++.+. +++
T Consensus 104 l~~~~~~~--~~~gd~vlv~~P~y~~~~-~~~~~~G~~v~~v~~~~~~g~~~------------d~~~l~~~~~---~~~ 165 (383)
T TIGR03540 104 IAHIPLAF--VNPGDIVLVPDPGYPVYR-IGTLFAGGEPYEMPLKEENGFLP------------DFDAIPEDIA---KKA 165 (383)
T ss_pred HHHHHHHh--CCCCCEEEEeCCCCcchH-HHHHhcCCEEEEEecCcccCCcc------------CHHHHHhhcc---ccc
Confidence 99998742 356788999999998643 34445565555544322222211 7888887775 245
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc--Cc--cccc-cCCCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GG--AQEY-FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~--~~--~~~~-~~~~~d~~~~sK~~~-~G~ 257 (411)
++++++..+|++|...+ .+.+++|.++|++|++++|+||+|.++ ..+. .. ..+. ......+.||||.++ +|+
T Consensus 166 ~~v~i~~P~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~Gl 244 (383)
T TIGR03540 166 KLMFINYPNNPTGAVAP-LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGW 244 (383)
T ss_pred eEEEEeCCCCCcCccCC-HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccc
Confidence 66666644556666654 555999999999999999999999877 4331 11 1111 122234569999997 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+..... ....+.+.+++.++.++++...+ +++++.++++.+.+.+.|++. ++.....
T Consensus 245 RiG~~i~~~~l~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~ 317 (383)
T TIGR03540 245 RIGMAVGNADLIAGLGKVKT---NVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI----GIDVEKP 317 (383)
T ss_pred eeeEEeCCHHHHHHHHHHHH---hcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEecCC
Confidence 99999999999887763221 11334455667766666643211 344555666666666666553 4333333
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
..|+++|+++.+. .+..++.+.|. ++||.+.++. .+.+|+++..+++++++++++|.+
T Consensus 318 ~~~~~~~~~l~~~-------------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPEG-------------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCCC-------------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 4577788887421 12356777764 6799999873 245899888889999999988864
No 122
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.96 E-value=4.3e-27 Score=222.77 Aligned_cols=332 Identities=14% Similarity=0.096 Sum_probs=217.7
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|+.++||..+ ++....++++.+++.+.+... ..|+ +..++++++++++.+.++ .++ .+++|+|++++
T Consensus 33 ~g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a 109 (394)
T PRK05942 33 QGLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG 109 (394)
T ss_pred cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence 46678999877 555445667888887777542 1232 235788999999987654 455 58999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..++... +.+++.|++.+++|.+....+ ...|..+..++.....++. -|++++++.+. +++
T Consensus 110 l~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~---~~~ 171 (394)
T PRK05942 110 LTHLALAY--VNPGDVVLVPSPAYPAHFRGP-LIAGAQIYPIILKPENDWL------------IDLSSIPEEVA---QQA 171 (394)
T ss_pred HHHHHHHh--CCCCCEEEEcCCCCcchHHHH-HHcCCEEEEeecCCccCCc------------cCHHHHHHhcc---ccc
Confidence 99988742 456788999999998754443 3344444333322111211 17888888775 356
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Ccc---ccc-cCCCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGA---QEY-FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~---~~~-~~~~~d~~~~sK~~~-~G~ 257 (411)
++++++..+|++|.+.+ .+.+++|.++|++|++++|+||+|..+ ..+. ... .+. .+....+.||||.++ +|+
T Consensus 172 k~i~l~~P~NPtG~~~s-~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~Gl 250 (394)
T PRK05942 172 KILYFNYPSNPTTATAP-REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGW 250 (394)
T ss_pred eEEEEcCCCCCCCCcCC-HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhh
Confidence 66666644556665554 444999999999999999999999877 3331 111 111 122344569999997 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+.... ....++.+.+++.++.++++.... ++.+++++++.+++.+.|++. ++.....
T Consensus 251 RiG~i~~~~~l~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~ 323 (394)
T PRK05942 251 RVGFVVGNRHIIQGLRTLK---TNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL----GWNIPPT 323 (394)
T ss_pred heeeeecCHHHHHHHHHHH---hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCC
Confidence 9999999999998887422 122445566777777777753222 445556666666666666543 4322233
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHH-HHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR-GMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
..|+++|+.+... .+..++.. .+.++||.+.++. .+.+|+++..+.+.+.+++++|.++
T Consensus 324 ~~~~f~~~~~~~~-------------~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 324 KATMYLWVPCPVG-------------MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred CeeeEEEEECCCC-------------CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 4567899987421 01134444 5567899998863 2468998877778888888887764
No 123
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=1.1e-26 Score=219.59 Aligned_cols=333 Identities=15% Similarity=0.133 Sum_probs=219.9
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~ 106 (411)
.|..++++..+.. +++ .++.+++++.+.++.. ..| .+..++++.+++++.+.++ .+++|++|+|+++++.
T Consensus 30 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 106 (387)
T PRK08960 30 AGHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALL 106 (387)
T ss_pred cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHH
Confidence 3567888888742 222 5888999999988753 223 2346788888988877654 6789999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++.+. ..+++.|++.+++|......+ ...|..+..++.....++. -|++++++.++. +...+
T Consensus 107 ~~~~~~--~~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~--~~~~i 169 (387)
T PRK08960 107 LASSLL--VDPGKHWLLADPGYPCNRHFL-RLVEGAAQLVPVGPDSRYQ------------LTPALVERHWNA--DTVGA 169 (387)
T ss_pred HHHHHh--cCCCCEEEEcCCCCcchHHHH-HhcCCeEEEEecCcccCCC------------CCHHHHHHHhCc--cceEE
Confidence 988753 456788999999998765433 3345544444332221111 178888887763 23445
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc---hhhhhhhcc-CCccccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGA 261 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~ 261 (411)
++++| +|++|...+ .+.+++|+++|++||+++|+||+|.++ ..+... ......++ +.||||.++ +|+|+||
T Consensus 170 ~i~~p-~NPtG~~~~-~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 245 (387)
T PRK08960 170 LVASP-ANPTGTLLS-RDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTGWRLGW 245 (387)
T ss_pred EEECC-CCCCCcCcC-HHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCcccEEEE
Confidence 55565 445565554 444999999999999999999999877 322211 11222233 458999998 8999999
Q ss_pred ccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH-Hhc--CChHHHHHHHHHHHHHHHHHHHHhcCCce-EEeee
Q 015230 262 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYI 337 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~-~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 337 (411)
+++++++++.+... ....+.+.+.+++.++.++++. ... +++++.++++.+.+.+.|++ +++.. .....
T Consensus 246 ~~~~~~~~~~~~~~---~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g 318 (387)
T PRK08960 246 LVAPPAAVPELEKL---AQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE----LGFGIAVEPQG 318 (387)
T ss_pred EEcCHHHHHHHHHH---HhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh----cCCcCCcCCCe
Confidence 99999988877632 1222445677888877777642 111 23344455555555555544 34322 22345
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC-------CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~-------~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
|+++|+++.+.. .+..++++.|. ++||.+.|+. .+.+|+++..+.+++.+++++|.+++.
T Consensus 319 ~~f~~~~~~~~~------------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 319 AFYLYADISAFG------------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred eEEEEEeccccC------------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 788899885311 11256777654 6799999872 235899888788999999999988764
No 124
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.96 E-value=5.5e-27 Score=221.76 Aligned_cols=333 Identities=14% Similarity=0.090 Sum_probs=222.4
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 108 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~a 108 (411)
..+++|..|.. ++. .++.+++++.+.+.... .|. +..++++.+++++.+.++ .++++++|+|+++++..+
T Consensus 24 ~~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~ 100 (382)
T PRK06108 24 EGVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLA 100 (382)
T ss_pred CCeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHH
Confidence 35788888742 222 57889999998887642 232 346788999999987765 578999999999999998
Q ss_pred HHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC-CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 109 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 109 l~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
+... ..+++.|++.+++|.... ......|..+..++.... .++. -|++++++.++. +++++
T Consensus 101 ~~~l--~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~------------~d~~~l~~~~~~---~~~~i 162 (382)
T PRK06108 101 AQAL--VGPGDEVVAVTPLWPNLV-AAPKILGARVVCVPLDFGGGGWT------------LDLDRLLAAITP---RTRAL 162 (382)
T ss_pred HHHh--cCCCCEEEEeCCCccchH-HHHHHCCCEEEEeeCCCCCCCcc------------CCHHHHHHhcCc---cceEE
Confidence 8743 345678888888887543 333444544444333211 1110 178888887752 45555
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc-ccCc--cccccCCC---cchhhhhhhcc-CCccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG--AQEYFGVT---PDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~-g~~~--~~~~~~~~---~d~~~~sK~~~-~G~~~ 259 (411)
+++..+|++|.+. +.+.+++|.++|++||+++|+||+|.++ .. +... ..+..... .-+.||||.++ +|+|+
T Consensus 163 ~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~Ri 241 (382)
T PRK06108 163 FINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRL 241 (382)
T ss_pred EEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccce
Confidence 5555556667654 4566999999999999999999999987 43 2111 11111111 12458999998 79999
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
||+++++++++.+... ....+.+.+++++.++.++++...+ ++++++++++.+++.+.|+++. ++.......
T Consensus 242 G~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p~~ 315 (382)
T PRK06108 242 GWLVAPPALGQVLEKL---IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP---GVEVAKPDG 315 (382)
T ss_pred eeeeCCHHHHHHHHHH---HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC---CCcccCCCe
Confidence 9999999998887632 1223456678888888777753211 4455566666666666665541 222222334
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
|+++|+.+... .+..++++.|. ++||.+.|+. .+.+|+++..+++++++++++|++++.
T Consensus 316 g~~~~~~l~~~-------------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 316 AMYAFFRIPGV-------------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred eEEEEEeCCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 77888877421 11256777764 6799998863 345899877799999999999999875
No 125
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=8e-27 Score=221.20 Aligned_cols=331 Identities=12% Similarity=0.003 Sum_probs=217.1
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC-C---C-CEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-S---I-EMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~-~---~-~~v~~~~~g~~a~ 105 (411)
.|+.++|+..+. .+++ .++.+++++.+.+.....|+ +..++++.+++++.+.++ . + ++|++|+|+++++
T Consensus 27 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGE--PKHP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCC--CCCC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 478899998884 2232 57788888887766533342 346788999999987765 2 3 4899999999999
Q ss_pred HHHHHHHHhccC---CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 106 MGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 106 ~~al~~~~~~~~---~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
..+++.. ..+ ++.|++.+++|.... ......|..+..++.....++.. |++.+++.+..
T Consensus 104 ~~~~~~l--~~~~~~gd~vlv~~P~y~~~~-~~~~~~g~~~~~vp~~~~~~~~~------------d~~~l~~~~~~--- 165 (396)
T PRK09147 104 FAFAQTV--IDRDGPGPLVVCPNPFYQIYE-GAALLAGAEPYFLNCDPANNFAP------------DFDAVPAEVWA--- 165 (396)
T ss_pred HHHHHHH--cCCCCCCCEEEEcCCCccchH-HHHHhcCCEEEEeccCccccCcc------------CHHHHHHHHhh---
Confidence 9988743 233 567899989887543 33444555555544422222211 78888877652
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc--Ccc-c---ccc-----CCCcchhhhh
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA-Q---EYF-----GVTPDLTTLG 250 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~--~~~-~---~~~-----~~~~d~~~~s 250 (411)
++++++++..+|++|.+.+ ++.+++|.++|++|+++||+||+|..+ ..+. ... . ... +...-+.|||
T Consensus 166 ~~k~i~l~nP~NPTG~~~s-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLP-LDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEcCCCCCcCccCC-HHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 4555555444555565544 555999999999999999999999877 3331 110 1 011 1122345999
Q ss_pred hhcc-CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 251 KIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 251 K~~~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
|.++ +|+|+||+++++++++.+.... ...+++.+++++.++.+++..-.. .+.++.++++.+.+.+.|++. .
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~~~---~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~ 318 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLLYR---TYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---L 318 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHHHh---hhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh---c
Confidence 9987 7999999999999988776321 122455677777776665531100 233444555555555555543 1
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------------CcceeeecCCCHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------------FEAGFTSLAHSSD 395 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------------~~~~~~~~~~t~~ 395 (411)
. ......|+++|+++.. ...++.+.|. ++||.+.|+. .+.+|++++.+++
T Consensus 319 ~--~~~p~~g~f~~~~~~~---------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~ 381 (396)
T PRK09147 319 D--VQLPDAGFYLWAKVPG---------------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLA 381 (396)
T ss_pred C--CCCCCeeEEEEEECCC---------------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHH
Confidence 2 1224568899998841 0146667665 6799998873 2358999888999
Q ss_pred HHHHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKVLR 409 (411)
Q Consensus 396 ~i~~~i~~l~~~~~ 409 (411)
++++++++|.+++.
T Consensus 382 ~l~~~l~rl~~~~~ 395 (396)
T PRK09147 382 ECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 126
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=3.3e-27 Score=230.30 Aligned_cols=340 Identities=11% Similarity=0.066 Sum_probs=215.0
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~ 106 (411)
.|+.+++|..+.. +++++ .++.+++++.+++.....|+ +..++++.+++++.+... .+++|++|+|+++++.
T Consensus 144 ~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~ 222 (517)
T PRK13355 144 AGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELIN 222 (517)
T ss_pred cCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHH
Confidence 5788999998732 44576 67889999988877643343 235677888888866543 5789999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.+++.. ...++.|++.+++|..... .....|..+..++.....++.. |++++++.++. +...+
T Consensus 223 ~~~~~l--~~~Gd~Vli~~P~y~~y~~-~~~~~g~~~v~~~~~~~~~~~~------------d~~~l~~~~~~--~~k~i 285 (517)
T PRK13355 223 LSMSAL--LDDGDEVLIPSPDYPLWTA-CVNLAGGTAVHYRCDEQSEWYP------------DIDDIRSKITS--RTKAI 285 (517)
T ss_pred HHHHHh--CCCCCEEEEcCCCCcCHHH-HHHHCCCEEEEeecCcccCCCC------------CHHHHHHhcCc--CceEE
Confidence 998753 4567889999999986544 3334454444333221112211 88999888762 23345
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccCCCcc-----hhhhhhhcc-CCcc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPD-----LTTLGKIIG-GGLP 258 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~~~~d-----~~~~sK~~~-~G~~ 258 (411)
++++| +|++|.+.+ .+.+++|.++|++|+++||+||+|..| ..+.. ... ....++ +.||||.++ +|||
T Consensus 286 ~i~nP-~NPTG~v~~-~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~--~~~~~~~~vi~~~S~SK~~~~~G~R 361 (517)
T PRK13355 286 VIINP-NNPTGALYP-REVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI--ASLAPDLFCVTFSGLSKSHMIAGYR 361 (517)
T ss_pred EEECC-CCCCCcCcC-HHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccH--HHhCCCCeEEEEecchhhccCcccc
Confidence 56666 555565554 555999999999999999999999877 43321 111 111223 247999997 7999
Q ss_pred cccccc--cHHH----HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHH---HHHHHHHHHHHHHHHHHHhc
Q 015230 259 VGAYGG--RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYE---YLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 259 ~g~~~~--~~~~----~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~---~~~~~~~~~~~~l~~~~~~~ 328 (411)
+||+++ ++++ ++.+.. .....++.+.+++.++.++++.... ++..+ ++.++.+++.+.|+++ .
T Consensus 362 iG~~i~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~ 434 (517)
T PRK13355 362 IGWMILSGNKRIAKDYIEGLNM----LANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAI---P 434 (517)
T ss_pred eEEEEeeCchhhHHHHHHHHHH----HhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 999974 4443 333321 1112345677888888777742111 11211 2233334444444432 1
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTIT 402 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~ 402 (411)
++.......++++|+++..... +..++...+.+.|.++||.+.|+. .+.+|++++.++++++++++
T Consensus 435 g~~~~~p~g~fy~~~~l~~~~~--------~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a~~ 506 (517)
T PRK13355 435 GISAVKPKAAFYIFPKIDVKKF--------NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDAMD 506 (517)
T ss_pred CcccCCCCeeeEEEeecCcccC--------CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHHHH
Confidence 2222334456677777642100 001122455677888899999873 34589999899999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|.+++..
T Consensus 507 rl~~~~~~ 514 (517)
T PRK13355 507 RLADFFSY 514 (517)
T ss_pred HHHHHHHH
Confidence 99998864
No 127
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7e-27 Score=220.55 Aligned_cols=332 Identities=18% Similarity=0.127 Sum_probs=217.8
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 108 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~a 108 (411)
..++||..+. ..+. .++.+.+++.+.+... ..|. +..++++.+++++.+.++ .++++++|+|+++|+..+
T Consensus 29 ~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~ 105 (384)
T PRK06348 29 PDIIDLSLGD--PDLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA 105 (384)
T ss_pred CCcEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence 3578988873 2222 5677877776655442 2232 336788899999987653 688999999999999999
Q ss_pred HHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE
Q 015230 109 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 188 (411)
Q Consensus 109 l~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi 188 (411)
+.+. ..+++.|++.+++|.+... .....|..+..++.....++. -|++++++.++. ++++++
T Consensus 106 ~~~~--~~~gd~vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~v~ 167 (384)
T PRK06348 106 LQSI--LDPGDEVIIHEPYFTPYKD-QIEMVGGKPIILETYEEDGFQ------------INVKKLEALITS---KTKAII 167 (384)
T ss_pred HHHh--cCCCCEEEEeCCCCcchHH-HHHHcCCEEEEecCCcCcCCc------------CCHHHHHHhhCc---CccEEE
Confidence 8753 3456789999888876443 333444444433321122211 188999888762 345555
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc-cccc---CCCcchhhhhhhcc-CCcccccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYF---GVTPDLTTLGKIIG-GGLPVGAY 262 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~-~~~~---~~~~d~~~~sK~~~-~G~~~g~~ 262 (411)
++..+|++|... +.+.+++|.++|++|+++||+||+|.++ ..+.... .... +...-+.||||.++ +|+|+||+
T Consensus 168 l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~ 246 (384)
T PRK06348 168 LNSPNNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYV 246 (384)
T ss_pred EeCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceee
Confidence 444455566555 4555999999999999999999999987 3322111 1111 11223559999999 89999999
Q ss_pred cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecce
Q 015230 263 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 340 (411)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 340 (411)
++++++++.+.. ......++.+++++.++..+++..+. +++++.++++.+++.+.|+++ .+........|++
T Consensus 247 v~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~---~~~~~~~p~gg~~ 320 (384)
T PRK06348 247 IAPDYIIETAKI---INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESI---PNLSLHPPKGSIY 320 (384)
T ss_pred ecCHHHHHHHHH---HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEE
Confidence 999988887763 12233567788888888777753221 344555666666666666543 1222223345778
Q ss_pred EEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 341 FGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
+|+++..... +..++++.+. ++||.+.|+. .+.+|++++.+++++++++++|++.
T Consensus 321 ~~~~~~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 321 AFINIKKTGL------------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 8998743211 1256787775 5699999874 2458998888999999999999764
No 128
>PRK09148 aminotransferase; Validated
Probab=99.96 E-value=4.6e-27 Score=223.00 Aligned_cols=338 Identities=15% Similarity=0.106 Sum_probs=218.4
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|+.++||..+. .+++ .++.+.+++.+.+... ..|. +..++++.+++++.+.++ .++ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGN--PDLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 567889998772 2233 4678888888876542 2232 345788899999987654 356 89999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..++... ..+++.|++.+++|+.....+ ...|..+..++...... .++++++.++.+..++
T Consensus 105 l~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~-~~~g~~v~~v~~~~~~~---------------~~~~l~~~~~~~~~~~ 166 (405)
T PRK09148 105 FANMAQAI--TAPGDVILCPNPSYPIHAFGF-IMAGGVIRSVPAEPDEE---------------FFPALERAVRHSIPKP 166 (405)
T ss_pred HHHHHHHh--cCCCCEEEEcCCCCcccHHHH-HhcCCEEEEEeCCCCCC---------------CccCHHHHHhhccccc
Confidence 99988743 346788999999998753333 34454444433211111 2233455555432345
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc--ccccc---CCCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYF---GVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~--~~~~~---~~~~d~~~~sK~~~-~G~ 257 (411)
++++++..+|++|...+ .+.+++|.++|++|+++||+||+|.+| ..+... ..... +....+.||||.++ +|+
T Consensus 167 ~~v~l~~P~NPtG~~~s-~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 167 IALIVNYPSNPTAYVAD-LDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred eEEEEeCCCCCCCcCCC-HHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 55555544555665554 555999999999999999999999877 333211 11111 12223569999999 899
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+.... ...+++.+.+++.++.++++.... +++++.++++.+++.+.|++. ++.....
T Consensus 246 R~G~~v~~~~~i~~l~~~~---~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p 318 (405)
T PRK09148 246 RMGFAVGNERLIAALTRVK---SYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA----GWDIPPP 318 (405)
T ss_pred heeeeeCCHHHHHHHHHHH---HHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc----CCccCCC
Confidence 9999999999998886321 222455567777777777652111 344555666666666666553 4332224
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..|+++|+.+.... . .....++.+.+. ++||.+.|+. .+.+|+++..+.+++++++++|.+++
T Consensus 319 ~~g~f~~~~l~~~~-~---------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 319 AASMFAWAPIPEAF-R---------HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred CeeEEEEEECCCcc-C---------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 45889999874310 0 001246666655 6899999973 24589988888999999999999887
Q ss_pred Hh
Q 015230 409 RQ 410 (411)
Q Consensus 409 ~~ 410 (411)
.+
T Consensus 389 ~~ 390 (405)
T PRK09148 389 SS 390 (405)
T ss_pred HH
Confidence 64
No 129
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=219.28 Aligned_cols=338 Identities=15% Similarity=0.127 Sum_probs=224.8
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---C-CCEEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~-~~~v~~~~~g~~a~~~ 107 (411)
..++||..+. .+++ .++.+.+++.+.+... ..| .+..++++.+++++.+.++ . .++|++|+|+++|+..
T Consensus 30 ~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGE--PDFT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 5689998885 2333 4677888888887653 122 2346788889998877654 2 4789999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
+++.. ..+++.|++.+++|.+.. ......|..+..++... .++. -|++.+++++++.+++++++
T Consensus 107 ~~~~~--~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~~~~~~-~~~~------------~d~~~l~~~~~~~~~~~~~i 170 (391)
T PRK07309 107 SLTAI--LEPGDKVLLPAPAYPGYE-PIVNLVGAEIVEIDTTE-NDFV------------LTPEMLEKAILEQGDKLKAV 170 (391)
T ss_pred HHHHh--cCCCCEEEEeCCCCcchH-HHHHHcCCEEEEEecCC-cCCc------------CCHHHHHHHhhccCCCeEEE
Confidence 98743 356788999999988753 34444555444433211 1110 17899999887644456777
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-cc-ccc-cCCCcchhhhhhhcc-CCcccccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEY-FGVTPDLTTLGKIIG-GGLPVGAY 262 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~-~~~-~~~~~d~~~~sK~~~-~G~~~g~~ 262 (411)
+++.++|++|...+ .+.+++|.++|++|++++|+||+|.++ ..+.. .. ... .+...-+.||||.++ +|+|+||+
T Consensus 171 ~l~~P~NPtG~~~s-~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~ 249 (391)
T PRK07309 171 ILNYPANPTGVTYS-REQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLI 249 (391)
T ss_pred EEECCCCCCCcCcC-HHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEE
Confidence 66644556665554 334999999999999999999999987 43321 11 111 111223458999998 89999999
Q ss_pred cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecce
Q 015230 263 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 340 (411)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~ 340 (411)
++++++++.+.... .....+.+.+++.++.++++.... ..+++.++++.+++.+.|++. ++.......|++
T Consensus 250 v~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~p~gg~~ 322 (391)
T PRK07309 250 FAPAEFTAQLIKSH---QYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL----GFKIIKPDGAFY 322 (391)
T ss_pred EeCHHHHHHHHHHH---hhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCeeEE
Confidence 99999988876321 222345677777877777653211 233455666666666666543 433333445777
Q ss_pred EEEEEecCCCCCcchhcccchHHHHHHHHH-HHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHHhC
Q 015230 341 FGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+|+.+.... ..+..++.+. +.++||.+.|+. .+.+|+++..+.+++++++++|++++.++
T Consensus 323 ~~~~l~~~~-----------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 323 IFAKIPAGY-----------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEECCCCC-----------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 888774311 0112466655 557899999874 34589988778899999999999998763
No 130
>PRK06855 aminotransferase; Validated
Probab=99.96 E-value=3.4e-27 Score=225.29 Aligned_cols=350 Identities=15% Similarity=0.120 Sum_probs=213.6
Q ss_pred CCCEEEeccCCcccccc--CC-CcHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChH
Q 015230 34 DGNEYIDYVGSWGPAII--GH-ADDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGT 102 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~--g~-~~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ 102 (411)
.|+.++++..+ ++. ++ .++.+.+++.+.+.... .| .+..++++.+++++.+.++ .+++|++|+|++
T Consensus 30 ~g~~~~~~~~G---~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~ 106 (433)
T PRK06855 30 LGVKITWENIG---DPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLG 106 (433)
T ss_pred ccccccccccC---CCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHH
Confidence 35667777665 553 45 67778888888775422 22 2346888999999988654 578999999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
+|+..++. .+.+++.|++.+++|++.........|..+..++.....++. -|++++++.++..+.
T Consensus 107 ~al~~~~~---l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~------------~d~~~l~~~~~~~~~ 171 (433)
T PRK06855 107 DAIAKIYG---LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWY------------PDLDDLENKVKYNPS 171 (433)
T ss_pred HHHHHHHH---hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCC------------CCHHHHHHHHhcCCC
Confidence 99988875 345678999999999974322222334333333322112221 188999999875322
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-cc-cccc-C-CCcchhhhhhhcc-CC
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYF-G-VTPDLTTLGKIIG-GG 256 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~-~~~~-~-~~~d~~~~sK~~~-~G 256 (411)
...+++++|. |++|... +.+.+++|.++|++|+++||+||+|.++ ..+.. .. .... + ....+.||||.++ +|
T Consensus 172 ~~~i~l~~P~-NPTG~~~-s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pG 249 (433)
T PRK06855 172 IAGILLINPD-NPTGAVY-PKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPG 249 (433)
T ss_pred ceEEEEECCC-CCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCc
Confidence 3445566664 4455443 3455999999999999999999999988 43321 11 1111 1 1233569999998 89
Q ss_pred ccccccccc-----H---HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH--hc--CChHHHHHHHHHHHHHHHHHH
Q 015230 257 LPVGAYGGR-----R---DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE--PGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 257 ~~~g~~~~~-----~---~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~--~~--~~~~~~~~~~~~~~~~~l~~~ 324 (411)
+|+||++++ + .+++.+.... . .....+.+++.++.++++.- ++ +++++.++++.+.+.+.|+++
T Consensus 250 lRiG~ii~p~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 250 SRCGWIEVYNADKDEVFKKYINSILNAK---M-IEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred ceEEEEEEeCCchhhHHHHHHHHHHHhh---c-cccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999862 2 2333332111 1 13345677887777776421 11 233444555555555555442
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCC-Ccchhcc-cc-------------hHHHHHHHHHHHHcCeEeccCCC-----c
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVY-NFEDAKK-SE-------------TTKFARFYRGMLEEGVYFAPSQF-----E 384 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~-------------~~~~~~~~~~l~~~Gi~v~~~~~-----~ 384 (411)
.+........|+++|+.+.+.... ....... ++ ..+.+.....+.++||.+.|+.. +
T Consensus 326 ---~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~ 402 (433)
T PRK06855 326 ---PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELN 402 (433)
T ss_pred ---CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCC
Confidence 122222344578999988542100 0000000 00 01112333556788999999842 2
Q ss_pred ceeeecCC-CHHHHHHHHHHHHHHHHh
Q 015230 385 AGFTSLAH-SSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 385 ~~~~~~~~-t~~~i~~~i~~l~~~~~~ 410 (411)
.+|++++. +++++++++++|.+++++
T Consensus 403 ~~Rls~~~~~~~~i~~~~~~l~~~~~~ 429 (433)
T PRK06855 403 GFRVTLLERDEEKFEWIYQTLAEKIEE 429 (433)
T ss_pred ceEEEECCCcHHHHHHHHHHHHHHHHH
Confidence 48898774 899999999999998875
No 131
>PRK08175 aminotransferase; Validated
Probab=99.96 E-value=9.7e-27 Score=220.43 Aligned_cols=338 Identities=15% Similarity=0.145 Sum_probs=222.1
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a 104 (411)
.|+.++||..+ ++.+..++.+.+++.+.+.... .|. +..++++.+++++.+.++ .++ ++++|+|++++
T Consensus 27 ~~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 27 RGEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 35778999887 6655566778888887765422 222 346788899999887654 455 79999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..++... ..+++.|++..++|......+ ...|..+..++... .+ .+.++++++++....++
T Consensus 104 l~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~-~~--------------~~~~~l~~~l~~~~~~~ 165 (395)
T PRK08175 104 LAHLMLAT--LDHGDTVLVPNPSYPIHIYGA-VIAGAQVRSVPLVE-GV--------------DFFNELERAIRESYPKP 165 (395)
T ss_pred HHHHHHHh--CCCCCEEEEcCCCCcchHHHH-HHcCCeEEEEeccc-CC--------------CcHHHHHHHHhhccCCc
Confidence 99877642 456678999999988654433 33444333322211 00 14678888887543456
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccccc---cCCCcchhhhhhhcc-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEY---FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~---~~~~~d~~~~sK~~~-~G~ 257 (411)
++++++..+|++|...+ .+.+++|.++|++||+++|+||+|.++ ..+.. ..... .+...-+.||||.++ +|+
T Consensus 166 ~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGl 244 (395)
T PRK08175 166 KMMILGFPSNPTAQCVE-LEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGW 244 (395)
T ss_pred eEEEEeCCCCCCCCCCC-HHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcch
Confidence 77777654566666555 444899999999999999999999877 33321 11111 112223468999997 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+.... ....++.+.+++.++.++++..+. +++++.++++.+++.+.|++. ++.....
T Consensus 245 RiG~~~~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~p 317 (395)
T PRK08175 245 RIGFMVGNPELVSALARIK---SYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA----GWMVEMP 317 (395)
T ss_pred hheeeeCCHHHHHHHHHHH---hhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc----CCcccCC
Confidence 9999999999988876322 112344555666666666642111 344555556666666666654 4332334
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..|+++|+++.+... .....++++.+. ++||.|.|+. .+.+|+++..+++.+.+++++|.+++
T Consensus 318 ~~g~~i~i~l~~~~~----------~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 318 KASMYVWAKIPEPYA----------AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CEEEEEEEECCcccC----------CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 468999999853210 011356776654 6799999973 23589988888999999999999988
Q ss_pred Hh
Q 015230 409 RQ 410 (411)
Q Consensus 409 ~~ 410 (411)
.+
T Consensus 388 ~~ 389 (395)
T PRK08175 388 RA 389 (395)
T ss_pred Hh
Confidence 75
No 132
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=6.2e-27 Score=220.80 Aligned_cols=331 Identities=13% Similarity=0.105 Sum_probs=218.8
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC-C--C-CEEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP-S--I-EMVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~-~--~-~~v~~~~~g~~a~~~ 107 (411)
..++||..+. .+++ .++.+.+++.+.+... ..| .+..++++.+++++.+.++ . + +++++|+|+++++..
T Consensus 29 ~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~ 105 (384)
T PRK12414 29 HDALNLSQGA--PNFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA 105 (384)
T ss_pred CCeEEcCCCC--CCCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence 4578888874 2222 5788899988877653 223 2346888999999988876 2 2 589999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
+++.. ..+++.|++.+++|.. +.......|..+..++... .+.. -|++.+++.++ .+++++
T Consensus 106 ~~~~l--~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~-~~~~------------~d~~~l~~~l~---~~~~~v 166 (384)
T PRK12414 106 AISAL--VHPGDEVIYFEPSFDS-YAPIVRLQGATPVAIKLSP-EDFR------------VNWDEVAAAIT---PRTRMI 166 (384)
T ss_pred HHHHh--cCCCCEEEEeCCCccc-hHHHHHHcCCEEEEEecCc-cccc------------cCHHHHHhhcC---cccEEE
Confidence 88753 4567889999999875 3333444454444433221 1110 17888988876 245666
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-cc-cccC---CCcchhhhhhhcc-CCcccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQ-EYFG---VTPDLTTLGKIIG-GGLPVG 260 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~-~~~~---~~~d~~~~sK~~~-~G~~~g 260 (411)
+++..+|++|.... ++.+++|.++|++|++++|+||+|..+ ..+... .. ...+ ...-+.||||.++ +|+|+|
T Consensus 167 ~i~~p~NPTG~~~s-~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG 245 (384)
T PRK12414 167 IVNTPHNPSATVFS-AADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVG 245 (384)
T ss_pred EEcCCCCCCCcCCC-HHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEE
Confidence 66655666676554 455999999999999999999999876 333211 11 1111 1223558999998 899999
Q ss_pred cccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc
Q 015230 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 339 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 339 (411)
|+++++++++.+... ....+++.+.+++.++.++++.-.. .++++.++++.+.+.+.|++. ++.......|+
T Consensus 246 ~~v~~~~l~~~l~~~---~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~~~~~gg~ 318 (384)
T PRK12414 246 YCLAPAELMDEIRKV---HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS----RFELLPSEGSF 318 (384)
T ss_pred EEecCHHHHHHHHHH---HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCcce
Confidence 999999998887631 2223566677888877766642111 234455666666666666654 43323344567
Q ss_pred eEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 340 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
++|+.+.... ...+.+.+.+.+.++||.+.|+. .+.+|++++.+++++++++++|.+
T Consensus 319 ~~~~~~~~~~----------~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 319 FMLARFRHFS----------DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred EEEEcccccC----------CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 8887774210 11122344466778899999973 245899888899999999999874
No 133
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.96 E-value=1e-26 Score=222.06 Aligned_cols=337 Identities=17% Similarity=0.163 Sum_probs=235.5
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC--C---CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--T---SF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 104 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~---~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a 104 (411)
...++|..++. ++--+....+.+++.+.+... . .+ .+..++++.+++++....+ .+++|++|+|+++|
T Consensus 89 ~~~i~f~~g~p-~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~a 167 (459)
T COG1167 89 PSVIDFAGGLP-DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQA 167 (459)
T ss_pred CceecCCCCCC-CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHH
Confidence 67789988852 332225666776666666441 1 11 3447788899999985554 57899999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
++.++++ ...+++.|++.+++|++... +....|..+..++.. ..|. |++++++.++++ ++
T Consensus 168 l~l~~~~--l~~pGd~v~vE~PtY~~~~~-~~~~~g~~~~~vp~d-~~G~--------------~~e~le~~~~~~--~~ 227 (459)
T COG1167 168 LDLLLRL--LLDPGDTVLVEDPTYPGALQ-ALEALGARVIPVPVD-EDGI--------------DPEALEEALAQW--KP 227 (459)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCcHHHHH-HHHHcCCcEEecCCC-CCCC--------------CHHHHHHHHhhc--CC
Confidence 9988885 23467899999999997433 233334433333332 3444 899999999865 79
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc-cC---ccccccCCCcchhhhhhhccCCccc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YG---GAQEYFGVTPDLTTLGKIIGGGLPV 259 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g-~~---~~~~~~~~~~d~~~~sK~~~~G~~~ 259 (411)
+++++.|.++|....+.+.+-.++|.++|++||+++|.||.|+.| ..+ .. .+.+..+....+.||||.+..|+|+
T Consensus 228 k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRl 307 (459)
T COG1167 228 KAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRL 307 (459)
T ss_pred cEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccce
Confidence 999999977664444555666999999999999999999999988 433 22 3344444556678999999999999
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH--Hhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR--LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~--~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
||+++++++++.+.. .....+.+.+.+.+.+....+.. +.. +.++..++++.+.+.+.|++.... ...+...
T Consensus 308 G~vv~p~~~~~~~~~---~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~-~~~~~~p 383 (459)
T COG1167 308 GYVVAPPELIEKLLR---LKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPE-LATWTRP 383 (459)
T ss_pred eeeeCCHHHHHHHHH---HHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CeeeecC
Confidence 999999999888873 23445677788887776665551 111 445555555555555555554321 1122334
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEecc-CC--------Ccceeeec-CCCHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAP-SQ--------FEAGFTSL-AHSSDDIQHTITAAE 405 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~-~~--------~~~~~~~~-~~t~~~i~~~i~~l~ 405 (411)
..|+++|+++.. ..+..++.+.+.++|+.+.+ +. .+.+|+++ ..+++++++++++|.
T Consensus 384 ~gG~flwl~l~~-------------~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~ 450 (459)
T COG1167 384 EGGLFLWLELPE-------------GIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLA 450 (459)
T ss_pred CceEEEEEEcCC-------------CCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 458999999954 23357899999999999998 42 23478865 447899999999999
Q ss_pred HHHHh
Q 015230 406 KVLRQ 410 (411)
Q Consensus 406 ~~~~~ 410 (411)
+++++
T Consensus 451 ~~~~~ 455 (459)
T COG1167 451 ALLRE 455 (459)
T ss_pred HHHHH
Confidence 98875
No 134
>PLN02187 rooty/superroot1
Probab=99.96 E-value=1.4e-26 Score=221.89 Aligned_cols=342 Identities=11% Similarity=0.057 Sum_probs=219.3
Q ss_pred CCEEEeccCCcccccc--C-C-CcHHHHHHHHHHHHcCCCCCC-----CCHHHHHHHHHHHhhCC---CCCEEEEeCChH
Q 015230 35 GNEYIDYVGSWGPAII--G-H-ADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSGT 102 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~--g-~-~~~~v~~a~~~~l~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ 102 (411)
++.++++..+ .+. . + .++++.+++.+.++....+.| ..++++.+++++.+.++ .+++|++|+|++
T Consensus 65 ~~~vi~l~~G---dp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~ 141 (462)
T PLN02187 65 NKTILPLGHG---DPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCN 141 (462)
T ss_pred CCCeEECCCC---CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHH
Confidence 5678888777 332 1 3 567889999988886433322 24688889998887654 688999999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
+++..++... ..+++.|++.+++|+.. .......|..+..++.....++.. |+++++++++. .
T Consensus 142 ~al~~~~~~l--~~pGd~Vlv~~P~y~~y-~~~~~~~g~~~~~~~l~~~~~~~~------------d~~~l~~~~~~--~ 204 (462)
T PLN02187 142 QGIEIVFESL--ARPNANILLPRPGFPHY-DARAAYSGLEVRKFDLLPEKEWEI------------DLEGIEAIADE--N 204 (462)
T ss_pred HHHHHHHHHh--cCCCCEEEEeCCCCccH-HHHHHHcCCEEEEEeCccccCCcc------------CHHHHHHhcCC--C
Confidence 9999999843 34668899999999864 333444555554443321111110 88999887763 3
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-ccccc-CC--Ccchhhhhhhcc-CC
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF-GV--TPDLTTLGKIIG-GG 256 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~~~~-~~--~~d~~~~sK~~~-~G 256 (411)
..++++++|.| ++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+..+ ....+ +. ..-+.||||.|+ +|
T Consensus 205 ~~~v~i~nP~N-PTG~v~s-~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pG 282 (462)
T PLN02187 205 TVAMVVINPNN-PCGNVYS-HDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPG 282 (462)
T ss_pred cEEEEEeCCCC-CCCCccC-HHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCcc
Confidence 45677777754 4554443 445999999999999999999999987 433221 11111 11 122458999988 79
Q ss_pred ccccccccc-HH-H---HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 257 LPVGAYGGR-RD-I---MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-E--PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 257 ~~~g~~~~~-~~-~---~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~-~--~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+|+||++++ ++ . ++.+......+ ..+.+.+.++++++.++++... . ++.++.++++.+++.+.|+++
T Consensus 283 lRiG~~v~~~p~~~~~~~~~~~~~~~~~-~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~---- 357 (462)
T PLN02187 283 WKIGWIALNDPEGVFETTKVLQSIKQNL-DVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDI---- 357 (462)
T ss_pred ceeEEEEecCchhHHHHHHHHHHHHHhc-cccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 999999873 32 2 23333111111 1122446788888888775311 1 344555666666666666653
Q ss_pred CCce-E-EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHH
Q 015230 329 GHAI-C-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTIT 402 (411)
Q Consensus 329 ~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~ 402 (411)
+... . ....|+++|+.+...... +..++.+.+.+.+.++||.+.|+. .+.+|+++...+++++++++
T Consensus 358 ~~~~~~~~P~gg~fl~~~l~~~~~~-------~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~al~ 430 (462)
T PLN02187 358 PCVVCPKKPESCTYLLTKLELSLMD-------NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDALE 430 (462)
T ss_pred CCCcCCCCCCEeEEEEeecChhhCC-------CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHHHH
Confidence 4322 1 234578888877421100 000122344566688899999974 34689999999999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|.+++++
T Consensus 431 rL~~~l~~ 438 (462)
T PLN02187 431 RLKGFCTR 438 (462)
T ss_pred HHHHHHHH
Confidence 99998864
No 135
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=5e-27 Score=215.34 Aligned_cols=319 Identities=17% Similarity=0.171 Sum_probs=222.5
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
.++|+.+|. +|+| .+|.+++++.+.++.. .-|++....++.+.+++.++ ..++|+.++|++|.+...+++.
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~--~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~-- 95 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKL--NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF-- 95 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhh--ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh--
Confidence 689999997 7888 5688999998888753 34566667888888888886 4689999999999999999852
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
..+++.|++..++|.. +...+...|..+...+... ... |++.+.+.++. +...+++++|+|+
T Consensus 96 ~~~gd~vl~~~Ptf~~-Y~~~a~~~g~~~~~v~~~~-~~~--------------d~~~~~~~~~~--~~~lv~i~nPNNP 157 (356)
T COG0079 96 VEPGDTVLIPEPTFSM-YEIAAQLAGAEVVKVPLKE-FRL--------------DLDAILAAIRD--KTKLVFLCNPNNP 157 (356)
T ss_pred hcCCCEEEEcCCChHH-HHHHHHhcCCeEEEecccc-ccc--------------CHHHHHHhhhc--CCCEEEEeCCCCC
Confidence 3345789999999974 4444555555555433322 111 78888887773 2344566666665
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc---hhhhhhhcc-CCcccccccccHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRDIM 269 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~~~~~~ 269 (411)
+ |.+.+.++ ++++.+.|.+ +.+||+||+|.+| ... ........++ +-||||+|+ +|+|+||++++++++
T Consensus 158 T-G~~~~~~~-l~~l~~~~~~-~~~vVvDEAY~eF~~~~---~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i 231 (356)
T COG0079 158 T-GTLLPREE-LRALLEALPE-GGLVVIDEAYIEFSPES---SLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELI 231 (356)
T ss_pred C-CCCCCHHH-HHHHHHhCCC-CcEEEEeCchhhcCCch---hhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHH
Confidence 5 55554232 7777777777 9999999999988 411 1111121222 349999999 899999999999999
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecC
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 348 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 348 (411)
+.+.+. -.+|+.+.++++++.++++.-+. ++.++.+.+...++.+.|+++ +........++|+++++..
T Consensus 232 ~~l~~v-----r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~----~~~~v~pS~aNFvlv~~~~- 301 (356)
T COG0079 232 AALNKV-----RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL----GLFGVFPSQANFVLVRVPD- 301 (356)
T ss_pred HHHHHh-----cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeecCCCCcEEEEECCC-
Confidence 999853 24788899999999998764322 444455555555555555554 4221223348888887742
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----cceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.. +..+.+.|.++||+++.... +++|++.. |+++.++++++|+++++.
T Consensus 302 ------------~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg-t~een~~ll~AL~~~~~~ 354 (356)
T COG0079 302 ------------AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG-TPEENDRLLAALREVLKG 354 (356)
T ss_pred ------------cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 22 36899999999999998853 35777755 666679999999998764
No 136
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=7.7e-27 Score=222.31 Aligned_cols=342 Identities=15% Similarity=0.102 Sum_probs=218.4
Q ss_pred CCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 105 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~ 105 (411)
|+.++++..+.......+ .++++.+++.++++... .|. +..++++.+++++.+.++ .+++|++|+|+++|+
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al 130 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAI 130 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHH
Confidence 788999998832111234 57889999999887632 232 346778888888877654 578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..+++.. ..+++.|++..++|+.. .......|..+..++.....++.. |++++++.++. +..+
T Consensus 131 ~l~~~~l--~~~Gd~Vlv~~P~y~~y-~~~~~~~g~~~~~~~~~~~~~~~~------------d~~~l~~~~~~--~~~~ 193 (430)
T PLN00145 131 EIIMSVL--AQPGANILLPRPGYPLY-EARAVFSGLEVRHFDLLPERGWEV------------DLEGVEALADE--NTVA 193 (430)
T ss_pred HHHHHHh--cCCCCEEEEcCCCCccH-HHHHHHcCCEEEEeeCCcccCCcC------------CHHHHHHHhCc--CceE
Confidence 9998853 24567899999998863 333444455444433221112111 88999888763 3455
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccC---CCcchhhhhhhcc-CCccc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~---~~~d~~~~sK~~~-~G~~~ 259 (411)
+++++| +|++|.+.+ .+.+++|.++|++||++||+||+|.+| ..+.. .....++ ...-+.||||.++ +|||+
T Consensus 194 i~i~~P-~NPtG~v~~-~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~Rl 271 (430)
T PLN00145 194 MVIINP-NNPCGSVYS-YEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRL 271 (430)
T ss_pred EEEeCC-CCCCCCCCC-HHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeE
Confidence 666666 455665544 444999999999999999999999877 43321 1111111 1223458999977 79999
Q ss_pred ccccc--cHHHHH------HhcCCCCcccccCCCCCHHHHHHHHHHHHHH-hc--CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 260 GAYGG--RRDIME------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 260 g~~~~--~~~~~~------~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~-~~--~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
||+++ ++.+++ .+.. ........+.+.+.++.++++.- ++ ++.++.++++.+.+.+.|+++
T Consensus 272 G~iv~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 343 (430)
T PLN00145 272 GWIATCDPNGILKETKVVDSIRN----YLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEI---- 343 (430)
T ss_pred EEEEEecchhhhhhhHHHHHHHH----HhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 99976 343332 2221 11112344677888877777531 11 344555666666666665543
Q ss_pred CCce-E-EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHH
Q 015230 329 GHAI-C-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTIT 402 (411)
Q Consensus 329 ~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~ 402 (411)
+... . ....|+++|+.+....... ..++.+.+.+.+.++||++.|+. .+.+|+++..+.++++++++
T Consensus 344 ~g~~~~~~P~ga~y~~v~l~~~~~~~-------~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~al~ 416 (430)
T PLN00145 344 KCITCPHKPEGSMFVMVKLDLSCLSG-------IKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDGLE 416 (430)
T ss_pred CCCCCCcCCCeeeEEEeccChhhcCC-------CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHH
Confidence 3222 1 2456888888874211000 00122334456667799999973 34689998889999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|.+++.+
T Consensus 417 rl~~~~~~ 424 (430)
T PLN00145 417 RLKSFCLR 424 (430)
T ss_pred HHHHHHHH
Confidence 99998764
No 137
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.8e-26 Score=215.10 Aligned_cols=328 Identities=13% Similarity=0.086 Sum_probs=212.4
Q ss_pred EEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHHHHH
Q 015230 38 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGVLR 110 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~al~ 110 (411)
++||.++. +.-..++++.+++.+.......|. +..++++.+++++.+.++ .++ +|++|+|+++++..++.
T Consensus 2 ~~~~~~g~---p~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~ 78 (350)
T TIGR03537 2 LFDFGTGD---PKEPTPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPL 78 (350)
T ss_pred eEeccCCC---CCCCCCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHH
Confidence 57888773 321157889999888765532332 345788899999887754 466 89999999999998876
Q ss_pred HHHhccC--CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE
Q 015230 111 LARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 188 (411)
Q Consensus 111 ~~~~~~~--~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi 188 (411)
.. .-.+ ++.|++..++|..... .....|..+..++.....++.. |++++++.++. ++++++
T Consensus 79 ~~-~~~g~~~d~Vl~~~p~y~~~~~-~~~~~g~~~~~v~~~~~~~~~~------------d~~~l~~~~~~---~~~~i~ 141 (350)
T TIGR03537 79 VF-IDPEEDRRRVIFGTPGYPVYER-GALFAGGEPTAVKLKKEDGFLL------------RLEKVEKSILE---ETKIVW 141 (350)
T ss_pred HH-cCCCCCCceEEEcCCCCcchHH-HHHhcCCEEEEcccCcccCCcc------------CHHHHHHhhhh---ccEEEE
Confidence 43 1111 2589999999986443 3444555444443321222211 88999888763 456666
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC--CCcchhhhhhhcc-CCcccccccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG--VTPDLTTLGKIIG-GGLPVGAYGG 264 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~--~~~d~~~~sK~~~-~G~~~g~~~~ 264 (411)
+++.+|++|...+ .+.+++|.++|++||+++|+||+|..+ ..+........+ ...-+.||||.++ +|+|+||+++
T Consensus 142 i~~p~NPtG~~~~-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~ 220 (350)
T TIGR03537 142 INYPHNPTGATAP-RSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAG 220 (350)
T ss_pred EeCCCCCcCcccC-HHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeec
Confidence 6666666776554 455999999999999999999999865 222211111111 1122458999997 7999999999
Q ss_pred cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEE
Q 015230 265 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 343 (411)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 343 (411)
++++++.+..... ..+.+.+.+++.++.+++..... ++.+++++++.+.+.+.|++. +........|+++|+
T Consensus 221 ~~~~~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~----g~~~~~~~g~~~~~~ 293 (350)
T TIGR03537 221 DEKLISFLRKLRA---NFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV----GLEYLYPDATFYLWV 293 (350)
T ss_pred CHHHHHHHHHHHH---hhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCeEEEEEE
Confidence 9988887763221 12334455566666555431000 233444555555555555443 433233445778888
Q ss_pred EEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 344 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
++... ....++.+.|.++||.+.++. .+.+|++++.+++++++++++|.+
T Consensus 294 ~~~~~-------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 294 KVPSG-------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred ECCCC-------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 87431 123688999999999999863 245899877889999999998875
No 138
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.96 E-value=6.2e-27 Score=218.63 Aligned_cols=321 Identities=13% Similarity=0.122 Sum_probs=213.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
+++.++|+..|. ++++ .+|.+++++.+.+..... |+..-..++.+.+++.++ .+++|++|+|+++++..+++..
T Consensus 27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~~--Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l 101 (366)
T PRK01533 27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHAL--YPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAV 101 (366)
T ss_pred CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcCc--CCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh
Confidence 456789998885 5555 778899999887665322 343334556666666666 7899999999999999988743
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
..+++.|++.+++|..... .....|..+..++.. ..++ |++++++.++. ++++++++..
T Consensus 102 --~~~gd~vlv~~P~y~~~~~-~~~~~g~~v~~v~~~-~~~~--------------d~~~l~~~~~~---~~~~v~i~~P 160 (366)
T PRK01533 102 --LKAGDNIVTAGATFPQYRH-HAIIEGCEVKEVALN-NGVY--------------DLDEISSVVDN---DTKIVWICNP 160 (366)
T ss_pred --cCCCCEEEEcCCcHHHHHH-HHHHcCCEEEEeecC-CCCc--------------CHHHHHHHhCc---CCcEEEEeCC
Confidence 3456789999999876443 334445444443321 1111 88999888763 3444444444
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Cccccc---cCCCcchhhhhhhcc-CCcccccccccH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEY---FGVTPDLTTLGKIIG-GGLPVGAYGGRR 266 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~---~~~~~d~~~~sK~~~-~G~~~g~~~~~~ 266 (411)
+|++|.+.+ .+.+++|.++|++++ ++|+||+|.+| ..+. ...... .+...-+.||||.++ +|+|+||+++++
T Consensus 161 ~NPTG~~~~-~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~ 238 (366)
T PRK01533 161 NNPTGTYVN-DRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238 (366)
T ss_pred CCCCCCCcC-HHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH
Confidence 556676665 344888888888876 57779999877 3321 111111 112223459999999 899999999999
Q ss_pred HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 267 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 267 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
++++.+.... .+++.+.+++.++.++++ +.+..++.++..+..++++.+.....++.. ....|+|+|+.+.
T Consensus 239 ~~~~~l~~~~-----~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~-~~~~~nf~~~~~~ 309 (366)
T PRK01533 239 ELIEKLNVVR-----LPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIPF-YQSQTNFIFLPVE 309 (366)
T ss_pred HHHHHHHHhc-----CCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCcc-CCCcCcEEEEeCC
Confidence 9998886421 257788899999888874 223333333333333444444333334322 2346889999762
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
+ ..++.+.|.++||.|++. .+.+|++.. +.++.++++++|++++.
T Consensus 310 ~----------------~~~~~~~l~~~GI~Vr~~-~~~iRis~~-~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 310 N----------------GGEIYEACAHAGFIIRPF-PNGVRITVG-TREQNEGVISVLQQHFE 354 (366)
T ss_pred C----------------HHHHHHHHHHCCcEEccC-CCceEEeCC-CHHHHHHHHHHHHHHHH
Confidence 1 257889999999999985 356888844 77999999999998765
No 139
>PRK07683 aminotransferase A; Validated
Probab=99.96 E-value=2.3e-26 Score=217.20 Aligned_cols=333 Identities=16% Similarity=0.107 Sum_probs=218.7
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~ 107 (411)
..++|+..+ .+.-..++.+++++.+.++.. ..| .+..++++++++++.+.++ .++ +|++|+|+++|+..
T Consensus 28 ~~~i~l~~~---~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIG---QPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCC---CCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 467898888 332124678899999988763 223 2357788899999876654 466 89999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
+++.. ...++.|++..++|++. .......|..+..++.. ..++.. |.+++++.++. +++++
T Consensus 105 ~~~~l--~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~~~~~-~~~~~~------------~~~~l~~~~~~---~~~~i 165 (387)
T PRK07683 105 AFRTI--LEPGTEVILPAPIYPGY-EPIIRLCGAKPVFIDTR-STGFRL------------TAEALENAITE---KTRCV 165 (387)
T ss_pred HHHHh--CCCCCEEEEcCCCccch-HHHHHHcCCEEEEeecC-cccCCC------------CHHHHHHhcCc---CceEE
Confidence 88753 34567899988888864 33344445544443322 112211 67888887763 34555
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcccccc----CCCcchhhhhhhcc-CCccccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF----GVTPDLTTLGKIIG-GGLPVGA 261 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~----~~~~d~~~~sK~~~-~G~~~g~ 261 (411)
++..++|++|...+ .+.+++|.++|+++|+++|+||+|..+ ..+.......+ +...-+.||||.++ +|+|+||
T Consensus 166 ~i~~p~NPtG~~~s-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 166 VLPYPSNPTGVTLS-KEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EEeCCCCCCCcCCC-HHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 55555556676554 444999999999999999999999977 33321111111 11222458999999 8999999
Q ss_pred ccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc
Q 015230 262 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 339 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 339 (411)
+++++++++.+.... .......+.+++.++.+.++.... ++.+++++++.+++.+.|++. +........|+
T Consensus 245 i~~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~ 317 (387)
T PRK07683 245 LFAPSYLAKHILKVH---QYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM----GLDVEKPTGAF 317 (387)
T ss_pred EEcCHHHHHHHHHHH---HhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc----CCcccCCCeeE
Confidence 999999888876321 122234456777777766642111 344555666666666666553 43333344567
Q ss_pred eEEEEEecCCCCCcchhcccchHHHHHHHH-HHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 340 MFGFFFTEGPVYNFEDAKKSETTKFARFYR-GMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
++|..+..... ....+.+ .+.++||.+.|+. .+.+|+++..+++++.+++++|.+++.+
T Consensus 318 ~~~~~~~~~~~------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 318 YLFPSIGHFTM------------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred EEEEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 77776643111 1134554 4677899999973 2468999888999999999999988754
No 140
>PRK09082 methionine aminotransferase; Validated
Probab=99.96 E-value=1e-26 Score=219.61 Aligned_cols=331 Identities=14% Similarity=0.110 Sum_probs=220.3
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---CC-CEEEEeCChHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACM 106 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~~-~~v~~~~~g~~a~~ 106 (411)
++.++||..+. ..++ .++.+.+++.+.++.. ..| .+..++++++++++.+.++ .+ +++++|+|+++|+.
T Consensus 29 ~~~~i~l~~g~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~ 105 (386)
T PRK09082 29 EHGAINLSQGF--PDFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALF 105 (386)
T ss_pred hCCEEEecCCC--CCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHH
Confidence 35678988873 2222 5778999988887753 222 2346788999999988765 23 37999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++... ..+++.|++.+++|... .......|..+..++... .+.. -|++++++.++ +++++
T Consensus 106 ~~~~~~--~~~gd~Vli~~p~y~~~-~~~~~~~g~~~~~~~~~~-~~~~------------~d~~~l~~~~~---~~~~~ 166 (386)
T PRK09082 106 AAILAL--VRPGDEVIVFDPSYDSY-APAIELAGGRAVRVALQP-PDFR------------VDWQRFAAAIS---PRTRL 166 (386)
T ss_pred HHHHHH--cCCCCEEEEeCCCchhh-HHHHHHcCCEEEEEecCc-cccc------------CCHHHHHHhcC---ccceE
Confidence 998753 34667888888888764 333444455444433321 1111 17888988876 24566
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc--CccccccC---CCcchhhhhhhcc-CCccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQEYFG---VTPDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~--~~~~~~~~---~~~d~~~~sK~~~-~G~~~ 259 (411)
++++..+|++|...+ .+.+++|.++|++|++++|+||+|.++ ..+. .......+ ...-+.||||.++ +|+|+
T Consensus 167 v~l~~p~NPtG~~~~-~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 245 (386)
T PRK09082 167 IILNTPHNPSGTVWS-AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKV 245 (386)
T ss_pred EEEeCCCCCCCcCCC-HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhh
Confidence 666555566666544 344999999999999999999999877 3321 11111112 2223458999997 79999
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
||+++++++++.+.... ....++.+.+++.++.+.++...+ +++++.++++.+++.+.|++. ++.......
T Consensus 246 G~iv~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~~~g 318 (386)
T PRK09082 246 GYCVAPAALSAEFRKVH---QYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS----RFKLLPCEG 318 (386)
T ss_pred hhhhCCHHHHHHHHHHH---hhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCe
Confidence 99999999988876421 223556677777777666642111 344555666777776666653 333333455
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC--------CcceeeecCCCHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~--------~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
|+++|+++.+.+ ..+..++++.| .++||.+.|+. .+.+|+++..+++++++++++|++
T Consensus 319 ~~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 319 TYFQLVDYSAIS-----------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred eEEEEEeccccC-----------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 778898885310 11225677765 67799998874 135899888899999999999875
No 141
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=3.3e-26 Score=217.37 Aligned_cols=341 Identities=14% Similarity=0.064 Sum_probs=222.7
Q ss_pred cCCCEEEeccCCcccccc---CC-CcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCC
Q 015230 33 IDGNEYIDYVGSWGPAII---GH-ADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNS 100 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~---g~-~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~ 100 (411)
..|+.++++..+ .|- .+ .++.+++++.+++... ..|+ +..++++.+++++.+..+ .+++|++|+|
T Consensus 28 ~~~~~~i~l~~G---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G 104 (409)
T PLN02656 28 ENGKRVISLGMG---DPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSG 104 (409)
T ss_pred ccCCeeeecCCC---CCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCC
Confidence 467889999888 443 23 6788999999888763 2332 336778888988887654 5789999999
Q ss_pred hHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 101 GTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 101 g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
+++|+..++... ..+++.|++.+++|.. +.......|..+..++.....++. -|++++++.++.
T Consensus 105 ~~~al~~~~~~l--~~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~i~~~~~~~~~------------~d~~~l~~~~~~- 168 (409)
T PLN02656 105 CTQAIDVALSML--ARPGANILLPRPGFPI-YELCAAFRHLEVRYVDLLPEKGWE------------VDLDAVEALADQ- 168 (409)
T ss_pred hHHHHHHHHHHH--hCCCCeEEEeCCCCCc-HHHHHHHcCCEEEEEeCCCcCCCC------------CCHHHHHHHhcc-
Confidence 999999988753 3466789998888864 333344445544444332111211 178889888763
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccc---cccCCCcchhhhhhhcc-
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EYFGVTPDLTTLGKIIG- 254 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~---~~~~~~~d~~~~sK~~~- 254 (411)
+...+++++|. |++|.+.+ .+.+++|.++|++|+++||+||+|.+| ..+.. ... +.......+.||||.|+
T Consensus 169 -~~~~v~l~~P~-NPtG~~~s-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~ 245 (409)
T PLN02656 169 -NTVALVIINPG-NPCGNVYS-YQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIV 245 (409)
T ss_pred -CceEEEEECCC-CCCCCCCC-HHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccC
Confidence 34556666664 45555543 444999999999999999999999987 44321 111 11111233568999977
Q ss_pred CCccccccccc--------HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHH
Q 015230 255 GGLPVGAYGGR--------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 255 ~G~~~g~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~ 323 (411)
+|+|+||++++ +++++.+..... ...+.+.+++.++.++++...+ ++.++.++++.+.+.+.|++
T Consensus 246 pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 321 (409)
T PLN02656 246 PGWRLGWFVTTDPSGSFRDPKIVERIKKYFD----ILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE 321 (409)
T ss_pred cceeEEEEEEeCcccccccHHHHHHHHHHHh----hhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 79999999873 567777653111 1224567888888877752111 33445555555556555554
Q ss_pred HHHhcCCce--EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHH
Q 015230 324 AGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDI 397 (411)
Q Consensus 324 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i 397 (411)
+ +... .....|+++|+++....... .....+.+.+.+.++||.+.|+. .+.+|+++..+++++
T Consensus 322 ~----~~~~~~~~p~gg~~~w~~l~~~~~~~-------~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l 390 (409)
T PLN02656 322 I----PCITCPHKPEGSMAVMVKLNLSLLED-------ISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSL 390 (409)
T ss_pred C----CCCcCCcCCCeEEEEEEecchhhcCC-------CCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHH
Confidence 3 3211 12345788999874211000 00122345677788999999984 246899988899999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|++++..
T Consensus 391 ~eal~rl~~~~~~ 403 (409)
T PLN02656 391 EEALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998764
No 142
>PRK08363 alanine aminotransferase; Validated
Probab=99.96 E-value=1.2e-26 Score=220.26 Aligned_cols=343 Identities=14% Similarity=0.031 Sum_probs=216.6
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~ 105 (411)
+|+.++|+..+.... ..+ .++.+.+++.+.+... ..| .+..++++.+++++.+.++ .+++|++|+|+++|+
T Consensus 28 ~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al 106 (398)
T PRK08363 28 KGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEAL 106 (398)
T ss_pred cCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 567899999884211 244 6788999998888653 223 2346777888888876654 578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..++... ..+++.|++.+++|......+. ..|..+..+...+..++. .|++++++.+.. +++
T Consensus 107 ~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~v~~~~~~~~~~~------------~d~~~l~~~~~~---~~~ 168 (398)
T PRK08363 107 QLIFGAL--LDPGDEILIPGPSYPPYTGLVK-FYGGVPVEYRTIEEEGWQ------------PDIDDIRKKITE---KTK 168 (398)
T ss_pred HHHHHHh--CCCCCEEEEcCCCCcchHHHHH-HcCCEEEEeccccccCCc------------CCHHHHHhhCCc---ceE
Confidence 9998743 4567889999998886544333 333322222111111211 178888887752 455
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccC---CCcchhhhhhhcc-CCcccc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG---VTPDLTTLGKIIG-GGLPVG 260 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~---~~~d~~~~sK~~~-~G~~~g 260 (411)
++++...+|++|...+ .+.+++|.++|++||+++|+||+|.++ ..+......... ...-+.||||.++ +|+|+|
T Consensus 169 ~v~l~~p~NPtG~~~~-~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 247 (398)
T PRK08363 169 AIAVINPNNPTGALYE-KKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLG 247 (398)
T ss_pred EEEEECCCCCCCcCcC-HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEE
Confidence 5555444555666554 344999999999999999999999876 333221111111 1122458999976 799999
Q ss_pred cccc--cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCce-EEe
Q 015230 261 AYGG--RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGG 335 (411)
Q Consensus 261 ~~~~--~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 335 (411)
|+++ ++++++.+...........++.+.+++.++.++++...+ ++.+++++++.+++.+.|+++ +... ...
T Consensus 248 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p 323 (398)
T PRK08363 248 YIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEI----PGISTTKP 323 (398)
T ss_pred EEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcC----CCCEecCC
Confidence 9976 666655544211111112356677788877777642111 344555666666666666543 3222 223
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
..|+++|+.+..... ....+.+.+.|.++||.+.|+. .+.+|++++.+++++++++++|+++++
T Consensus 324 ~g~~~~~~~l~~~~~----------~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 324 QGAFYIFPRIEEGPW----------KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred CeEEEEEEEeccCCC----------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 446677766643100 0112344566788999998874 235899988899999999999998876
Q ss_pred h
Q 015230 410 Q 410 (411)
Q Consensus 410 ~ 410 (411)
+
T Consensus 394 ~ 394 (398)
T PRK08363 394 E 394 (398)
T ss_pred H
Confidence 4
No 143
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.96 E-value=2.8e-26 Score=216.67 Aligned_cols=330 Identities=13% Similarity=0.069 Sum_probs=218.6
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCC--C---CCCCHHHHHHHHHHHhhCC---C-CCEEEEeCChHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F---GAPCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMG 107 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~--~---~~~~~~~~~l~~~l~~~~~---~-~~~v~~~~~g~~a~~~ 107 (411)
.++++..+. .++. .++.+++++.+.+..... | .+..++++.+++++++.++ . .+++++|+|+++++..
T Consensus 28 ~~~~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~ 104 (389)
T PRK05957 28 GTISLGQGV--VSYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMN 104 (389)
T ss_pred CeEEccCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHH
Confidence 457777763 2222 677899999888765322 2 2346788999999988776 2 6689999999999988
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
++... +.+++.|++.++.|... .......|..+..++.....++ |++++++.++ ++++++
T Consensus 105 ~~~~~--~~~gd~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~i~---~~~klv 164 (389)
T PRK05957 105 AILAI--TDPGDEIILNTPYYFNH-EMAITMAGCQPILVPTDDNYQL--------------QPEAIEQAIT---PKTRAI 164 (389)
T ss_pred HHHHh--cCCCCEEEEeCCCCcCH-HHHHHhcCCEEEEeecCCCCCc--------------CHHHHHHhcC---cCceEE
Confidence 88643 35667888888888654 3333444544444332211111 8899998876 345666
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-cc-c---cccCCCcchhhhhhhcc-CCcccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-Q---EYFGVTPDLTTLGKIIG-GGLPVG 260 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~-~---~~~~~~~d~~~~sK~~~-~G~~~g 260 (411)
++...+|++|...+.. .+++|.++|++||++||+||+|.++ ..+.. .. . +.......+.||||.++ +|+|+|
T Consensus 165 ~~~~p~NPtG~~~~~~-~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 165 VTISPNNPTGVVYPEA-LLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred EEeCCCCCCCcCcCHH-HHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 6665566677766544 4999999999999999999999877 33211 11 1 11112233568999998 799999
Q ss_pred cccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh-c-CChHHHHHHHHHHHHHHHHHHHHhcCC--ceEEee
Q 015230 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-E-PGTYEYLNKITGELTQGIIDAGKKAGH--AICGGY 336 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~ 336 (411)
|+++++++++.+.... .....+.+.+++.++..+++.-. . ++.++.++++.+++.+.|+++ +. ......
T Consensus 244 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~ 316 (389)
T PRK05957 244 YMVIPIHLLEAIKKIQ---DTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQL----QDRCTLHPAN 316 (389)
T ss_pred EEecCHHHHHHHHHHH---hhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhc----CCCccccCCC
Confidence 9999999998887422 12233455677777766664211 1 334455666666666666553 22 222234
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecC-CCHHHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVL 408 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~-~t~~~i~~~i~~l~~~~ 408 (411)
.|+++|+++... .+..++++.|. ++||.+.|+. .+.+|+++. .+++++++++++|.+.+
T Consensus 317 gg~~~~~~~~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 317 GAFYCFLKVNTD-------------LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGL 383 (389)
T ss_pred eeEEEEEeCCCC-------------CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 578888887421 12367888876 5799999973 235899875 58899999999999887
Q ss_pred Hh
Q 015230 409 RQ 410 (411)
Q Consensus 409 ~~ 410 (411)
+.
T Consensus 384 ~~ 385 (389)
T PRK05957 384 KT 385 (389)
T ss_pred Hh
Confidence 65
No 144
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.4e-26 Score=217.69 Aligned_cols=323 Identities=15% Similarity=0.157 Sum_probs=213.8
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
+++.++||.++. +++| .+|.+++++.+.+.....| ++....++.+.+++.++ .+++|++|+|+++++..++...
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l 104 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY--PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAY 104 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh
Confidence 567899999985 4666 5788999998887653333 32223567777777776 6789999999999988877642
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
..+++.|++.+++|... .......|..+..++.. ..+. |++++++.++ +++++++++.+
T Consensus 105 --~~~gd~vl~~~p~y~~~-~~~~~~~g~~~~~~~~~-~~~~--------------~~~~l~~~~~---~~~~~v~l~~p 163 (367)
T PRK02731 105 --LGPGDEVIYSEHGFAVY-PIAAQAVGAKPVEVPAK-DYGH--------------DLDAMLAAVT---PRTRLVFIANP 163 (367)
T ss_pred --cCCCCEEEEecCCHHHH-HHHHHHcCCeEEEeccc-CCCC--------------CHHHHHHHhC---CCCcEEEEeCC
Confidence 34567888888888643 22233344444332221 1111 7899988886 35566666666
Q ss_pred CCCCCccCCCHHHHHHHHHHHHH--hCCEEEEecccccc-cccc-CccccccCCCcc---hhhhhhhcc-CCcccccccc
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGG 264 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~--~~~~li~De~~~g~-~~g~-~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~ 264 (411)
+|++|.+.+ .+++.++|+. +++++|+||+|.++ ..+. .......+..++ +.||||.++ +|+|+||+++
T Consensus 164 ~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 164 NNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 677787777 5555555554 49999999999876 3331 112222222223 338999998 7999999999
Q ss_pred cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEE
Q 015230 265 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 343 (411)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 343 (411)
++++++.+.... .++..+.+++.++.++++.... ++.+++++++.+++.+.|++. +.... .+.|+++|+
T Consensus 240 ~~~~~~~l~~~~-----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~-~~~g~~~~i 309 (367)
T PRK02731 240 PPEIIDALNRVR-----QPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL----GLEYI-PSVGNFILV 309 (367)
T ss_pred CHHHHHHHHHcc-----CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCccC-CCCceEEEE
Confidence 999988887432 2455677888887777642111 334444555555555555543 43222 345889999
Q ss_pred EEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----cceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 344 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+.. ..+..++.+.|.++||.+.++.. +.+|+++. +.++++++++.|+++++.
T Consensus 310 ~~~~-------------~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 310 DFDD-------------GKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred ECCC-------------CCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 8732 11236789999999999998742 45888876 678999999999988753
No 145
>PRK08912 hypothetical protein; Provisional
Probab=99.95 E-value=1.8e-26 Score=218.23 Aligned_cols=334 Identities=18% Similarity=0.172 Sum_probs=218.8
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~ 107 (411)
...+||..+.. ..+ .++.+.+++.+.+... ..|. +..++++.+++++.+.++ .++ +|++|+|+++++..
T Consensus 26 ~~~i~l~~g~p--~~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 102 (387)
T PRK08912 26 HGAINLGQGFP--DDP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAA 102 (387)
T ss_pred CCeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHH
Confidence 46789888842 222 4678888888877653 2232 346788899999887654 466 89999999999988
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC-CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
++... ..+++.|++.+++|+.. .......|..+..++... ..++ |++++++.+.. ++++
T Consensus 103 ~~~~~--~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~--------------~~~~l~~~~~~---~~~~ 162 (387)
T PRK08912 103 ALLAL--VEPGDEVVLFQPLYDAY-LPLIRRAGGVPRLVRLEPPHWRL--------------PRAALAAAFSP---RTKA 162 (387)
T ss_pred HHHHh--cCCCCEEEEeCCCchhh-HHHHHHcCCEEEEEecCcccCcC--------------CHHHHHHHhCc---cceE
Confidence 88742 34567899999888754 334444455444433321 1111 78888888762 4455
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccccccC---CCcchhhhhhhcc-CCccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFG---VTPDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~~~---~~~d~~~~sK~~~-~G~~~ 259 (411)
++++..+|++|...+ .+.+++|.++|++|++++|+||+|.++ ..+.. ......+ ...-+.||||.++ +|+|+
T Consensus 163 v~l~~p~NPtG~~~s-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRi 241 (387)
T PRK08912 163 VLLNNPLNPAGKVFP-REELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKV 241 (387)
T ss_pred EEEeCCCCCcCcccC-HHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCcee
Confidence 555544555665554 344999999999999999999999877 33311 1111112 1223458999999 89999
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
||+++++++++.+.... ....++.++..+.++.+++....+ ++++++++++.+++.+.|++. ++.......
T Consensus 242 G~~~~~~~~~~~l~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~g 314 (387)
T PRK08912 242 GFVCAAPPLLRVLAKAH---QFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI----GFPVLPSQG 314 (387)
T ss_pred EEEecCHHHHHHHHHHH---hhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCc
Confidence 99999999888876321 122345566666666555531111 345566666666666666654 332223345
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC--------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~--------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
|+++|+++..... ..+..++++.|. ++||.+.|+. .+.+|++++.+++.+++++++|.+++
T Consensus 315 ~~~l~~~l~~~~~----------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 315 TYFLTVDLAPLGL----------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAAR 384 (387)
T ss_pred ceEEEecccccCC----------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHH
Confidence 7788888853110 012256777765 5799999863 24589998888999999999999987
Q ss_pred Hh
Q 015230 409 RQ 410 (411)
Q Consensus 409 ~~ 410 (411)
++
T Consensus 385 ~~ 386 (387)
T PRK08912 385 RR 386 (387)
T ss_pred hc
Confidence 64
No 146
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=215.62 Aligned_cols=321 Identities=15% Similarity=0.119 Sum_probs=206.9
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
.+..++||..|. ++++ .+|.+.+++.+.++....| +..-...+.+.+++.++ .+++|++|+|+++++..+++..
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y--~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~ 102 (357)
T PRK14809 28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVHSY--PKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAM 102 (357)
T ss_pred CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhcC--CCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh
Confidence 456799999884 4444 6778889988877653233 33224456666666666 7899999999999999988742
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
..+++.|++.+++|... .......|.++..++.+...++. .+.+++++... ++++++++..
T Consensus 103 --~~~gd~V~v~~P~y~~~-~~~~~~~g~~~~~~~l~~~~~~~------------~~~~~~~~~~~----~~k~i~l~~p 163 (357)
T PRK14809 103 --LDPGDTVLVPDPGFAYY-GMSARYHHGEVREYPVSKADDFE------------QTADTVLDAYD----GERIVYLTSP 163 (357)
T ss_pred --cCCCCEEEEeCCChHHH-HHHHHHcCCeEEEEecccCcCCC------------cCHHHHHHhhc----CCcEEEEeCC
Confidence 34567899999988633 33344445555444432222221 15666655432 3445555555
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-cccccCCCcchhhhhhhcc-CCcccccccccHHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 269 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~ 269 (411)
+|++|...+. +.+++|+++|++ +++||+||+|.+| ..+... ..+..+....+.||||.++ +|+|+||++++++++
T Consensus 164 ~NPTG~~~s~-~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~ 241 (357)
T PRK14809 164 HNPTGSEIPL-DEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWA 241 (357)
T ss_pred CCCCCcCCCH-HHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHH
Confidence 5666766653 337777777764 7899999999987 433211 1111222334569999998 899999999999998
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
+.+... ..++..+.+++.++.++++ +++..++.++..+..++.+.+....... ...|+++|+++.+
T Consensus 242 ~~~~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~----~~~g~f~~~~~~~-- 307 (357)
T PRK14809 242 DAYARV-----NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAPTW----ESAGNFVLAEVGD-- 307 (357)
T ss_pred HHHHHh-----CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCccC----CCCCCEEEEECCC--
Confidence 888742 2356678888888777764 2222333333333333333333222211 3568899987621
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
..++.+.|.++||.+.++.. +.+|+++. +.+++++++++|+++++
T Consensus 308 --------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 --------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred --------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 25788889999999999752 35888865 57899999999999875
No 147
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.95 E-value=7.6e-26 Score=197.96 Aligned_cols=327 Identities=17% Similarity=0.204 Sum_probs=242.8
Q ss_pred CEEEeccCCccccccCC-CcHHHHHHHHHHHHc-CCCC------CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~-~~~~------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~ 107 (411)
+++-=+.|| .|+|. .||+|++|+.+.+++ +.+. .+.+....+|.+.|+++.+ .+..++.+|+--|++.
T Consensus 171 k~VtVWCSN---DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHq-K~aALlFsSCfVANDs 246 (570)
T KOG1360|consen 171 KKVTVWCSN---DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQ-KEAALLFSSCFVANDS 246 (570)
T ss_pred CceEEEecC---ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhc-Ccceeeeeeeeeccch
Confidence 456666777 89999 899999999999999 3333 2446777888888888884 4444555578889998
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC-CCcEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAA 186 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~~~~ 186 (411)
.|..+.+ .-++.+|..+...|..- ..|+ +..+.+-..++|||+++|++++++. +..+++
T Consensus 247 tLftLak-~lpgcei~SD~gNHASM------------------I~GI-rns~v~K~IFrHND~~hL~~lL~~~~~svPKi 306 (570)
T KOG1360|consen 247 TLFTLAK-KLPGCEIFSDEGNHASM------------------IQGI-RNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKI 306 (570)
T ss_pred HHHHHHH-HCCCcEEeccccchHHH------------------HHHh-hhcCCcceeeccCCHHHHHHHHHhCCCCCCce
Confidence 8853312 12456777777877532 1121 2233456778999999999999974 456889
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCC--Ccchh--hhhhhccCCcccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVG 260 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~--~~d~~--~~sK~~~~G~~~g 260 (411)
|-+|.++++.|.+.| +++|.+++++||.+-++||+|+ |+ .....+..++.|+ ..||+ |++|+||. --|
T Consensus 307 vAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc--VGG 380 (570)
T KOG1360|consen 307 VAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC--VGG 380 (570)
T ss_pred EEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc--ccc
Confidence 999999999999999 9999999999999999999997 66 2222233344454 35765 79999996 345
Q ss_pred cccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
|+..+.++++-++...+.+.+ |.+.+|..++.++++.+++.. ..++...+++..++++.|.++ +++.. ...
T Consensus 381 YIAat~~LvDmiRSyAaGFIF-TTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~----GiPVi-~~p 454 (570)
T KOG1360|consen 381 YIAATRKLVDMIRSYAAGFIF-TTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL----GIPVI-PNP 454 (570)
T ss_pred eehhhhhHHHHHHHhcCceEE-ecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc----CCccc-CCC
Confidence 778889999999887777776 668888999999999988765 356666778888888888776 43322 233
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCCcc-------eee--ecCCCHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEA-------GFT--SLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~-------~~~--~~~~t~~~i~~~i~~l~~~ 407 (411)
..++.+.+ .+...+.++++.|..+ ||+|..-.++. +|| ...+|.+.++.+++.+..+
T Consensus 455 SHIiPv~v-------------gda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~v 521 (570)
T KOG1360|consen 455 SHIIPVRV-------------GDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDV 521 (570)
T ss_pred cceeeeec-------------cCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHH
Confidence 55555555 4556667888888765 99998776665 465 4678999999999999999
Q ss_pred HHhC
Q 015230 408 LRQI 411 (411)
Q Consensus 408 ~~~~ 411 (411)
++++
T Consensus 522 w~~v 525 (570)
T KOG1360|consen 522 WNEV 525 (570)
T ss_pred HHHc
Confidence 8864
No 148
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=4e-26 Score=216.71 Aligned_cols=341 Identities=13% Similarity=0.087 Sum_probs=218.9
Q ss_pred cCCCEEEeccCCcccccc--C-C-CcHHHHHHHHHHHHcC--CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCC
Q 015230 33 IDGNEYIDYVGSWGPAII--G-H-ADDQVLAALGETMKKG--TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNS 100 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~--g-~-~~~~v~~a~~~~l~~~--~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~ 100 (411)
.+|+.++++..+ .+- + + .++.+.+++.+.++.. ..| .+..++++.+++++.+.++ .+++|++|+|
T Consensus 29 ~~~~~~i~l~~G---~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G 105 (409)
T PLN00143 29 DDHRLAISFGFG---DPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLG 105 (409)
T ss_pred CCCCceeeCCCC---CCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecC
Confidence 457789998888 443 3 3 7788889999988763 223 2346788999999987654 6789999999
Q ss_pred hHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 101 GTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 101 g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
+++++..+++.. ..+++.|++.+++|+... ......|..+..++.....++. -|+++++++++.
T Consensus 106 ~~~al~~~~~~l--~~~gd~v~v~~P~y~~~~-~~~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~- 169 (409)
T PLN00143 106 CKHAAEIIIKVL--ARPEANILLPRPGFPDVE-TYAIFHHLEIRHFDLLPEKGWE------------VDLDAVEAIADE- 169 (409)
T ss_pred hHHHHHHHHHHH--cCCCCEEEEcCCCCcCHH-HHHHHcCCEEEEEeccCCCCCc------------CCHHHHHHhccc-
Confidence 999999998843 356688999999988643 3333444444333321111211 188999887753
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccC---CCcchhhhhhhcc-
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG- 254 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~---~~~d~~~~sK~~~- 254 (411)
+...+++++|. |++|.+.+ .+.+++|.++|++|+++||+||+|.++ ..+.. .....+. ...-+.||||.|+
T Consensus 170 -~~~~~~~~nP~-NPTG~~~s-~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 170 -NTIAMVIINPG-NPCGSVYS-YEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMI 246 (409)
T ss_pred -CCEEEEEECCC-CCCCCccC-HHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCC
Confidence 35667777774 45555544 444999999999999999999999987 43321 1111111 1223458999987
Q ss_pred CCcccccccc--cHHH------HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH-hc--CChHHHHHHHHHHHHHHHHH
Q 015230 255 GGLPVGAYGG--RRDI------MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 255 ~G~~~g~~~~--~~~~------~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~-~~--~~~~~~~~~~~~~~~~~l~~ 323 (411)
+|+|+||+++ ++.+ ++.+.. ......+ .+.+++.++.++++.. .. ++.+++++++.+++.+.|++
T Consensus 247 pGlRvG~~v~~~p~~~~~~~~~~~~~~~---~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 247 PGWGLGWLVTCDPSGLLQICEIADSIKK---ALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred CccceEEEEeeCchhhhhhHHHHHHHHH---HHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999987 3333 222221 1111122 3567777777776521 11 34455555655555555554
Q ss_pred HHHhcCCce--EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHH
Q 015230 324 AGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDI 397 (411)
Q Consensus 324 ~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i 397 (411)
+ +... .....|+++|+++....... .....+.+.+.+.++||.+.|+. .+.+|++++.+++++
T Consensus 323 ~----~~~~~~~~p~gg~f~w~~l~~~~~~~-------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l 391 (409)
T PLN00143 323 I----PCIMCPQKAEGAFFALVKLNLLLLED-------IEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSL 391 (409)
T ss_pred C----CCCCCCCCCCeeEEEEEecchhhcCC-------CCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHH
Confidence 3 3221 12345889999885310000 00122334456688899999974 346899998899999
Q ss_pred HHHHHHHHHHHHh
Q 015230 398 QHTITAAEKVLRQ 410 (411)
Q Consensus 398 ~~~i~~l~~~~~~ 410 (411)
++++++|.+++.+
T Consensus 392 ~~al~rl~~~l~~ 404 (409)
T PLN00143 392 EDGLGRLKSFCGR 404 (409)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998754
No 149
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=2e-26 Score=215.92 Aligned_cols=316 Identities=13% Similarity=0.083 Sum_probs=206.7
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
..++||.+|. +++| .+|.+++++.+.++... .++..-..++.+.+++.++ .++++++|+|+++++..+++..
T Consensus 29 ~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~--~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~-- 101 (359)
T PRK03158 29 EKIVKLASNE--NPYG-PSPKVKEAIAAHLDELA--LYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL-- 101 (359)
T ss_pred CceEEecCCC--CCCC-CCHHHHHHHHHHHHHhh--cCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH--
Confidence 3789998885 4555 68889999988876532 1233334556666666666 6789999999999998877642
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
..+++.|++.+++|+.... .....|..+..++.. ..+ .|++++++.++ +++++++++.++|
T Consensus 102 ~~~gd~v~~~~p~y~~~~~-~~~~~g~~~~~~~~~-~~~--------------~d~~~l~~~~~---~~~~~v~i~~p~N 162 (359)
T PRK03158 102 LNPGTNTVMAEPTFSQYRH-NAIIEGAEVREVPLK-DGG--------------HDLEAMLKAID---EQTKIVWICNPNN 162 (359)
T ss_pred hCCCCEEEEcCCCHHHHHH-HHHHcCCeEEEEecC-CCC--------------cCHHHHHHhcC---CCCCEEEEeCCCC
Confidence 3456789999999986433 333344444443322 111 17888887765 2455665555567
Q ss_pred CCCccCCCHHHHHHHHHHHHH--hCCEEEEecccccc-cccc-Ccc---ccccCCCcchhhhhhhcc-CCcccccccccH
Q 015230 195 NSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAY-GGA---QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRR 266 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~--~~~~li~De~~~g~-~~g~-~~~---~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~ 266 (411)
++|.+.+ .++|.++++. +++++|+||+|.+| ..+. ... .+..+...-+.||||.++ +|+|+||+++++
T Consensus 163 PtG~~~~----~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~ 238 (359)
T PRK03158 163 PTGTYVN----HEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE 238 (359)
T ss_pred CCCCCCC----HHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH
Confidence 7788777 4455555544 69999999999877 3321 111 111222222459999999 799999999999
Q ss_pred HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 267 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 267 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
++++.+.... .+++.+.+++.++.++++.-.. ++.++.++++.+++.+.|++ +++. ..+..|+++|+++
T Consensus 239 ~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~-~~~~~g~~i~~~~ 308 (359)
T PRK03158 239 ELIEKLNIAR-----PPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKE----YGLF-YYPSQTNFIFVDT 308 (359)
T ss_pred HHHHHHHHhc-----CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCe-eCCCcCcEEEEEC
Confidence 9998886422 2466788999998888752111 22333344444444444443 3332 2344578888876
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
.. ...++.+.|.++||.+.++. .+.+|+++. +.+++++++++|+++
T Consensus 309 ~~---------------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 309 GR---------------DANELFEALLKKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred CC---------------CHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 21 12678899999999999963 345788866 789999999999875
No 150
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.7e-26 Score=216.60 Aligned_cols=320 Identities=15% Similarity=0.101 Sum_probs=209.1
Q ss_pred cCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEE-eCChHHHHHHHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRF-VNSGTEACMGVLR 110 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~-~~~g~~a~~~al~ 110 (411)
.+++.++||.+|. ++++ .+|.+++++.+.+..... |+.....++.+.+++.++ .++++++ ++|+++++..+++
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~--y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHR--YPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcC--CCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHH
Confidence 4566899999884 4566 678899999888775333 333334677777777776 6788999 6777888888876
Q ss_pred HHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEc
Q 015230 111 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 190 (411)
Q Consensus 111 ~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~ 190 (411)
.. ..+++.|++.+++|... .......|..+..++.....+. |++++++.++ +++++++++
T Consensus 106 ~~--~~~gd~vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~--------------~~~~l~~~~~---~~~~~v~~~ 165 (361)
T PRK00950 106 TF--IDPGDEVIIPTPTFSYY-EISAKAHGAKPVYAKREEDFSL--------------DVDSVLNAIT---EKTKVIFLC 165 (361)
T ss_pred Hh--cCCCCEEEEcCCChHHH-HHHHHHcCCEEEEeecCCCCCc--------------CHHHHHHHhc---cCCCEEEEe
Confidence 42 34567788888887653 3333344544443321111111 7888888775 245565555
Q ss_pred ccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHH
Q 015230 191 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 268 (411)
Q Consensus 191 ~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~ 268 (411)
.++|++|.+.+ .+++.++|+++++++|+||+|.+| ........+..+....+.||||.++ +|+|+||+++++++
T Consensus 166 ~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 166 TPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 55677888888 889999999999999999999877 2111111111122223459999998 79999999999999
Q ss_pred HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecC
Q 015230 269 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 348 (411)
Q Consensus 269 ~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 348 (411)
++.+.... .++..++++++++.++++ +.+..++..+..+..++.+.+.. .+ ......|+++|+++..
T Consensus 242 ~~~~~~~~-----~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l---~~-~~~~~~~~~i~~~~~~- 308 (361)
T PRK00950 242 IDYYMRAK-----TPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNEL---PF-KVYPSEANFVLVDVTP- 308 (361)
T ss_pred HHHHHHhc-----CCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhc---Ce-eECCCcceEEEEECCC-
Confidence 88876422 234466777777776664 22233333333333344443321 11 1123457788887721
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
.+..++.+.|.++||.+.++. .+.+|+++. +.+++++++++|++++
T Consensus 309 -------------~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -------------MTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred -------------CCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 113688999999999998753 235888877 7789999999999875
No 151
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6.9e-26 Score=211.18 Aligned_cols=320 Identities=15% Similarity=0.113 Sum_probs=214.6
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
..+|+..|. ++++ .++.+.+++.+.+.......|+......+.+.+++.++ .+++|++|+|+++++..++... .
T Consensus 23 ~~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l--~ 97 (351)
T PRK14807 23 YKYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF--I 97 (351)
T ss_pred ceeEccCCC--CCCC-CCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh--c
Confidence 347777773 2333 67889999988876432233343335667777777776 6789999999999999888743 4
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCC
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 195 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~ 195 (411)
.+++.|++.+++|.. +.......|..+..++.....++ |++++++.++. .++++++++..+|+
T Consensus 98 ~~gd~Vlv~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~~--~~~k~v~l~~p~NP 160 (351)
T PRK14807 98 NKGDVVIYPHPSFAM-YSVYSKIAGAVEIPVKLKEDYTY--------------DVGSFIKVIEK--YQPKLVFLCNPNNP 160 (351)
T ss_pred CCCCEEEEeCCChHH-HHHHHHHcCCeEEEeecCCCCCC--------------CHHHHHHHhhc--cCCCEEEEeCCCCC
Confidence 567889999998874 33444455555444333211111 78999988873 25666666666777
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHHHhc
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 273 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~ 273 (411)
+|...+ .+++.++|++++.++|+||+|.+| ........+..+...-+.||||.++ +|+|+||+++++++++.+.
T Consensus 161 tG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~ 236 (351)
T PRK14807 161 TGSVIE----REDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLN 236 (351)
T ss_pred CCCCCC----HHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHH
Confidence 888877 788888898888899999999876 2111111111222233569999998 8999999999999998887
Q ss_pred CCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCc
Q 015230 274 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 353 (411)
Q Consensus 274 ~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 353 (411)
.... .+..+.+++.++.++++...-++.++.++++.+++.+.|+++ +......+.|+++|+.+.+
T Consensus 237 ~~~~-----~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~----~g~~~~~~~~~~~~i~~~~------ 301 (351)
T PRK14807 237 LVKS-----PYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI----PGIKVYPSKTNFILVKFKD------ 301 (351)
T ss_pred HccC-----CCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEECcCCccEEEEEcCC------
Confidence 4221 344567888888777753211444455666666666666543 2222234457788887731
Q ss_pred chhcccchHHHHHHHHHHHHcCeEeccCC-----CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 354 EDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 354 ~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.++||.+.+.. .+.+|+++. +.++.+++++.|++++
T Consensus 302 ----------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 ----------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred ----------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 2678899999999997753 245888876 5678999999998764
No 152
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5e-26 Score=215.95 Aligned_cols=345 Identities=10% Similarity=0.039 Sum_probs=221.4
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~ 106 (411)
.|..++|+..+. +.-..++.+.+++.+.+.... .|. +..++++.+++++.+.++ .+++|++|+|+++|+.
T Consensus 31 ~~~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 31 AGRSIVDLTVGE---PDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred ccCCEEEcCCCC---CCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 456788988874 322257889999998887532 232 345788999999988765 4789999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++.. ...+++.|++.+++|.+.. ......+.....++.+...++.. |++++++.++. ++++
T Consensus 108 ~~~~~--~~~~gd~vl~~~p~y~~y~-~~~~~~~~~~~~v~~~~~~~~~~------------~~~~l~~~~~~---~~~~ 169 (402)
T PRK06107 108 LALMA--TLEAGDEVIIPAPYWVSYP-DMVLANDGTPVIVACPEEQGFKL------------TPEALEAAITP---RTRW 169 (402)
T ss_pred HHHHH--hcCCCCEEEEecCCCcCHH-HHHHHcCCEEEEecCCcccCCCC------------CHHHHHhhcCc---CceE
Confidence 99864 2456678888888777543 33333343333322221122110 77888887752 4444
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHh-CCEEEEecccccc-ccccC-cc-ccc-cC---CCcchhhhhhhcc-CCc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYG-GA-QEY-FG---VTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~-~~~li~De~~~g~-~~g~~-~~-~~~-~~---~~~d~~~~sK~~~-~G~ 257 (411)
++++..+|++|...+ .+.+++|+++|++| ++++|+||+|..+ ..+.. .. ... .+ ....+.||||.|+ +|+
T Consensus 170 v~l~~p~NPtG~~~s-~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 248 (402)
T PRK06107 170 LILNAPSNPTGAVYS-RAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW 248 (402)
T ss_pred EEEECCCCCCCcCcC-HHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc
Confidence 444433555665544 44499999999998 9999999999876 33321 11 111 01 1122458999998 899
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
|+||+++++++++.+... ....++..+.++++++..+++.-+. ++.++.++++.+.+.+.|+++ .++.....
T Consensus 249 RiG~~~~~~~~~~~~~~~---~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~p 322 (402)
T PRK06107 249 RIGYAAGPADLIAAINKL---QSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI---PGLSCLVP 322 (402)
T ss_pred ceeeeecCHHHHHHHHHH---HHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC---CCCcccCC
Confidence 999999999998887732 2223566788888888877742111 334455566666666666543 12222234
Q ss_pred eecceEEEEEecCCCCCcchhcccch---HHHHHHH-HHHHHcCeEeccCCC----cceeeecCCCHHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSET---TKFARFY-RGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~l~~~Gi~v~~~~~----~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
..|+++|+.+....... .+.. .+...+. +.+.++||.+.|+.. +.+|++++.+++++++++++|.++
T Consensus 323 ~gg~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~ 397 (402)
T PRK06107 323 DGAFYLYVNCAGLIGKT-----TPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERA 397 (402)
T ss_pred CcceEEeeecccccccc-----cccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 45788888773210000 0100 0123455 455678999999842 458999889999999999999999
Q ss_pred HHhC
Q 015230 408 LRQI 411 (411)
Q Consensus 408 ~~~~ 411 (411)
++++
T Consensus 398 l~~~ 401 (402)
T PRK06107 398 VAAL 401 (402)
T ss_pred HHhc
Confidence 8764
No 153
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=5.8e-26 Score=215.08 Aligned_cols=330 Identities=13% Similarity=0.045 Sum_probs=214.9
Q ss_pred cCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC-----CC-CEEEEeCChHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-----SI-EMVRFVNSGTE 103 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~-----~~-~~v~~~~~g~~ 103 (411)
..|+.++||..|. +.-..++.+++++.+.+.....|. +..++++.+++++.+.++ .+ ++|++|+|+++
T Consensus 25 ~~~~~~i~l~~~~---p~~~~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 25 PASKPPIALSIGE---PKHPTPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred hcCCCeEEecCCC---CCCCCCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 3578889999884 322367889999988776533332 346788999999988753 34 47999999999
Q ss_pred HHHHHHHHHHhccCCc--EEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC
Q 015230 104 ACMGVLRLARAFTGRE--RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 181 (411)
Q Consensus 104 a~~~al~~~~~~~~~~--~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 181 (411)
++..+++.. +.+++ .|++.+++|.+.. ......|..+..++.....++.. |++++++.+.+
T Consensus 102 al~~~~~~l--~~~gd~~~vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~------------d~~~l~~~~~~-- 164 (393)
T TIGR03538 102 ALFAFAQAV--INPGQAPLVVMPNPFYQIYE-GAALLAGAEPYFLNCTAENGFLP------------DFDAVPESVWR-- 164 (393)
T ss_pred HHHHHHHHH--cCCCCcceEEecCCCCcchH-HHHHhcCCeEEEeeccccCCCCC------------CHHHHHHHHhh--
Confidence 999988753 23333 3788888887543 33444555555444322222211 78888887763
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc--cCcc----ccccC-----CCcchhhh
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA--YGGA----QEYFG-----VTPDLTTL 249 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g--~~~~----~~~~~-----~~~d~~~~ 249 (411)
++++++++..+|++|... +.+.+++|.++|++|+++||+||+|..+ ..+ .... ....+ ...-+.||
T Consensus 165 -~~k~i~l~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 242 (393)
T TIGR03538 165 -RCQLLFVCSPGNPTGAVL-SLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL 242 (393)
T ss_pred -cceEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence 455555444455556544 3555999999999999999999999877 332 1110 11111 11224589
Q ss_pred hhhcc-CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 250 GKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 250 sK~~~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
||.++ +|+|+||+++++++++.+.... ...+++.+++.+.++.+.+..-.. ++.++.++++.+.+.+.|++.
T Consensus 243 SK~~~~~GlRvG~~i~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--- 316 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGDAEILKAFLRYR---TYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--- 316 (393)
T ss_pred hhhcCCcccceEEEecCHHHHHHHHHHH---HhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 99987 7999999999999888776321 122445667777776666531110 334445555555565655543
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC------------cceeeecCCCH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF------------EAGFTSLAHSS 394 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~------------~~~~~~~~~t~ 394 (411)
.++ .....|+++|+++.. + ..++.+.|. ++||.+.|+.. +.+|++++.++
T Consensus 317 ~~~--~~p~gg~f~~~~~~~------------~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~ 379 (393)
T TIGR03538 317 LDL--ELPDAGFYLWPKVPG------------D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPL 379 (393)
T ss_pred Ccc--cCCCeeEEEEEECCC------------C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCH
Confidence 121 234568899998841 0 156777765 57999987742 34889888899
Q ss_pred HHHHHHHHHHHHH
Q 015230 395 DDIQHTITAAEKV 407 (411)
Q Consensus 395 ~~i~~~i~~l~~~ 407 (411)
+++++++++|++.
T Consensus 380 ~~l~~~l~~l~~~ 392 (393)
T TIGR03538 380 EECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999874
No 154
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=212.70 Aligned_cols=336 Identities=13% Similarity=0.059 Sum_probs=218.7
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 108 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~a 108 (411)
..++||..+. ..++ .++.+.+++.+.++... .| .+..++++.+++++.+.++ .++++++|+|+++|+..+
T Consensus 33 ~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (391)
T PRK08361 33 ENVISLGIGE--PDFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLA 109 (391)
T ss_pred cCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHH
Confidence 4578988773 2233 46788888888876532 22 2346778888888876654 578999999999999998
Q ss_pred HHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE
Q 015230 109 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 188 (411)
Q Consensus 109 l~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi 188 (411)
++.. ..+++.|++.+++|.+.. ......|..+..++.....++. -|++++++.++. ++++++
T Consensus 110 ~~~l--~~~g~~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~i~~---~~~~v~ 171 (391)
T PRK08361 110 FESL--LEEGDEVIIPDPAFVCYV-EDAKIAEAKPIRIPLREENEFQ------------PDPDELLELITK---RTRMIV 171 (391)
T ss_pred HHHh--cCCCCEEEEcCCCCcccH-HHHHHcCCEEEEEecCCccCCC------------CCHHHHHHhccc---ccEEEE
Confidence 8743 345678999998887643 3444455555444332211111 188999888863 355555
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Ccccccc--CCCcchhhhhhhcc-CCccccccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF--GVTPDLTTLGKIIG-GGLPVGAYG 263 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~~--~~~~d~~~~sK~~~-~G~~~g~~~ 263 (411)
++..+|++|...+ .+.+++|.++|+++++++|+||+|.++ ..+. ....... ....-+.||||.++ +|+|+||++
T Consensus 172 i~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 172 INYPNNPTGATLD-KEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred EeCCCCCCCcCcC-HHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 5544666776655 445899999999999999999999877 3322 1111111 11122458999998 799999999
Q ss_pred ccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc
Q 015230 264 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 339 (411)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~ 339 (411)
+++++++.+.... ...+++.+.+.+.++.++++.... ++.++.++++.+.+.+.|+++ .+........|+
T Consensus 251 ~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~p~g~~ 324 (391)
T PRK08361 251 APEQVIKDMIKLH---AYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEM---PHIKVFEPKGAF 324 (391)
T ss_pred cCHHHHHHHHHHH---hhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCEEE
Confidence 9998888775311 112445567777777776642111 233344455555555555443 122222234467
Q ss_pred eEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHHHhC
Q 015230 340 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
++|+.+..... +..++.+.|. ++||.+.|+. .+.+|+++..+++++++++++|.++++++
T Consensus 325 ~~~~~l~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~~ 391 (391)
T PRK08361 325 YVFANIDETGM------------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEEL 391 (391)
T ss_pred EEEEECCCCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhcC
Confidence 88888842111 1256777776 5799999863 23589988889999999999999998764
No 155
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=5.2e-26 Score=213.61 Aligned_cols=326 Identities=11% Similarity=0.039 Sum_probs=206.1
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~ 107 (411)
.|+.++||..+. .+++ .++.+.+++.+.......|. +..++++.+++++.+.++ .+++|++|+|+++++..
T Consensus 22 ~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGE--PQFE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 478999999884 3344 46778888877665433343 346788999999988765 68999999999999988
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
++++.....+++.|++..|+|...... ....|..+..++.....++.. |.++. .++ +++++
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~-~~~~g~~v~~v~~~~~~~~~~------------d~~~~--~~~----~~k~v 159 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGA-AIASRAKVLLMPLTKENDFTP------------SLNEK--ELQ----EVDLV 159 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHH-HHhcCCEEEEeecccccCCcC------------Ccchh--hhc----cccEE
Confidence 776431113567788888888764433 345555555444322222211 32222 222 34555
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc-cc--------ccCCCcchhhhhhhcc-CC
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QE--------YFGVTPDLTTLGKIIG-GG 256 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~-~~--------~~~~~~d~~~~sK~~~-~G 256 (411)
+++..+|++|.+.+ .+.+++|.++|++||++||+||+|.++ ..+.... .. .++...-+.||||.++ +|
T Consensus 160 ~i~nP~NPTG~~~s-~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRTLS-LEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcccC-HHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 54444455555544 455999999999999999999999877 3222111 11 1112223559999987 79
Q ss_pred cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 257 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+|+||+++++++++.+.... ....+..+.+++.++.+++. .++..++.++..+.-++.+.+. .+.. ...
T Consensus 239 lRiG~ii~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~---l~~~--~p~ 307 (374)
T PRK05839 239 LRSGFIAGDASILKKYKAYR---TYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREI---LGIT--IPP 307 (374)
T ss_pred ceeEEEecCHHHHHHHHHHH---hhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHh---cCCC--CCC
Confidence 99999999999988776321 11234456666666655542 2222222222222222222222 1222 345
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH-cCeEeccCC--------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gi~v~~~~--------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
.|+++|+++.+ ..++.+.|.+ +||.+.|+. .+.+|+++..+++++.+++++|.++
T Consensus 308 gg~fi~~~~~~----------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~ 371 (374)
T PRK05839 308 ATFYVWLPVDN----------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTY 371 (374)
T ss_pred eeEEEEEeCCC----------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 58899998731 1467777764 899999963 2468998888899999999999988
Q ss_pred HH
Q 015230 408 LR 409 (411)
Q Consensus 408 ~~ 409 (411)
+.
T Consensus 372 l~ 373 (374)
T PRK05839 372 LE 373 (374)
T ss_pred hh
Confidence 75
No 156
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.2e-26 Score=215.21 Aligned_cols=331 Identities=13% Similarity=0.107 Sum_probs=211.4
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC---CCCC--CCCHHHHHHHHHHHhhC-----CCCCEEEEeCChHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG---TSFG--APCLLENVLAEMVISAV-----PSIEMVRFVNSGTEAC 105 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~---~~~~--~~~~~~~~l~~~l~~~~-----~~~~~v~~~~~g~~a~ 105 (411)
..++++.+|. ++++ .+|.+++++.+++... ..|. +..++++.+++++.+.+ -.+++|++|+|+++++
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 3578888883 3333 7788999998877763 1222 23567778888776653 1578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC-CCCCCCCCCCceeecCCCCHHHHHHHHHcC-CCc
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENN-KGE 183 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~ 183 (411)
..++... ...+++.|++.+|+|... .......|..+..++... ..+. |++++++.+++. .++
T Consensus 105 ~~~~~~~-~~~g~~~Vlv~~P~y~~~-~~~~~~~g~~~~~~~~~~~~~~~--------------d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 105 RSLLIAT-CLGGEGSILVAEPTFSMY-GILAQTLGIPVVRVGRDPETFEI--------------DLAAAQSAIEQTQNPP 168 (374)
T ss_pred HHHHHHH-cCCCCCeEEEcCCChHHH-HHHHHHcCCEEEEecCCcccCCC--------------CHHHHHHHHHhhcCCC
Confidence 8776532 223334799999999754 344445555554443321 1122 889999888741 135
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCccccc
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGA 261 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~ 261 (411)
++++++++.+|++|...+.+ .+++|.++| ++++||+||+|.+| ...............-+.||||.++ +|+|+||
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~-~l~~l~~~~--~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAA-ELEWLRSLP--EDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGY 245 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHH-HHHHHHhcc--CCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceee
Confidence 66666555566677766543 488888877 49999999999877 3211111111111122558999997 7999999
Q ss_pred ccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceE
Q 015230 262 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 341 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 341 (411)
+++++++++.+.... ..++.+.+++.++.++++.. +.+.+++++..+. ++.+.+.....+........|+++
T Consensus 246 ~v~~~~l~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g~f~ 317 (374)
T PRK02610 246 AIGHPELIAVLEKVR-----LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPSAANFL 317 (374)
T ss_pred eecCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcceEE
Confidence 999999998886432 13455777887777666432 2223333333222 222322222333222234568888
Q ss_pred EEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHHHhC
Q 015230 342 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
|+++... .+..++.+.|.++||.+.+. .+.+|+++.. .+++++++++|+++++.+
T Consensus 318 ~~~l~~~-------------~~~~~~~~~l~~~gi~v~~~-~~~lRls~~~-~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 318 YLRLSQD-------------AALAALHQALKAQGTLVRHT-GGGLRITIGT-PEENQRTLERLQAALTQL 372 (374)
T ss_pred EEeCCCC-------------CCHHHHHHHHHHCCEEEEeC-CCeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence 9887421 12367888899999999874 3578998774 567899999999988754
No 157
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.95 E-value=1.3e-25 Score=210.67 Aligned_cols=314 Identities=18% Similarity=0.187 Sum_probs=212.1
Q ss_pred CEEEeccCCccccccCC-CcHHHHHHHHHHHHcC--------CCCC------CCCHHHHHHHHHHHhhCCCCCEEEEeCC
Q 015230 36 NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG--------TSFG------APCLLENVLAEMVISAVPSIEMVRFVNS 100 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~--------~~~~------~~~~~~~~l~~~l~~~~~~~~~v~~~~~ 100 (411)
.+++||.|| +|+|+ .+|++.+++.++++.. .+.. +..+..+++.+.+++.++. +..++.++
T Consensus 4 ~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~-~~~l~~~s 79 (370)
T PRK05937 4 SLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA-PEAFIVPS 79 (370)
T ss_pred CceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CeEEEECC
Confidence 468999999 99999 8999999999998774 2221 2356788999999998864 45566677
Q ss_pred hHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 101 GTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 101 g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
|+.|+...+. .+.+++++|+.+..+|+.....+..... ....++++|++++++.++..
T Consensus 80 G~~a~~~~~~---~~~~~~d~ii~d~~~H~sv~~~~~~~~~-------------------~~~~~~~~d~~~l~~~l~~~ 137 (370)
T PRK05937 80 GYMANLGLCA---HLSSVTDYVLWDEQVHISVVYSLSVISG-------------------WHQSFRHNDLDHLESLLESC 137 (370)
T ss_pred hHHHHHHHHH---HhCCCCCEEEEEhhhhHHHHHHHHHcCC-------------------ceEEecCCCHHHHHHHHHhh
Confidence 8888865443 3445678899999999766554433211 12335677999999999753
Q ss_pred C---CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCccccccC---CCcchhhhhh
Q 015230 181 K---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG---VTPDLTTLGK 251 (411)
Q Consensus 181 ~---~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~~~~---~~~d~~~~sK 251 (411)
. +++.+|+++++++++|.+.| +++|.++|+++|+++++||+|+ |. ..+..+. ..++ ..+++.||||
T Consensus 138 ~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tlsK 212 (370)
T PRK05937 138 RQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYSK 212 (370)
T ss_pred hccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEechh
Confidence 1 34567888999999999999 9999999999999999999997 53 3332211 1222 2357789999
Q ss_pred hccC-CcccccccccHHHHHHhcC-CCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 252 IIGG-GLPVGAYGGRRDIMEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 252 ~~~~-G~~~g~~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
++++ | +.+...++..+.+.. ..+... +.+.+++++++..++++.+.+ +..+++++++.+++++.|+..
T Consensus 213 ~~g~~G---~~vl~~~~~~~~~~~~~~~~~~--s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~--- 284 (370)
T PRK05937 213 ALGSMG---AALLSSSEVKQDLMLNSPPLRY--STGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA--- 284 (370)
T ss_pred hhhcCc---eEEEcCHHHHHHHHHhCCCCee--cCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC---
Confidence 9984 4 234444555444431 112222 344677777777888887765 234455666666665555321
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC---Ccceee--ecCCCHHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTIT 402 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~~~~~~--~~~~t~~~i~~~i~ 402 (411)
. .+....+.+.. .....+.+.|.++||++.... .+.+|+ ...+|++|++++++
T Consensus 285 -~-------~~~~~~i~~~~--------------~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~ 342 (370)
T PRK05937 285 -A-------PGCVQPIFLPG--------------ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVS 342 (370)
T ss_pred -C-------CCCEEEEEeCC--------------hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHH
Confidence 1 12222233311 123678889999999987542 234676 46789999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
.|++++++
T Consensus 343 ~L~~~~~~ 350 (370)
T PRK05937 343 VLATYLEK 350 (370)
T ss_pred HHHHHHHH
Confidence 99998765
No 158
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4e-26 Score=214.55 Aligned_cols=320 Identities=16% Similarity=0.073 Sum_probs=211.4
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+..++|+..|. ++++ .+|.+++++.+. ... ..|+.....++.+.+++.++ .+++|++|+|+++++..+++..
T Consensus 51 ~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~--~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~- 123 (380)
T PLN03026 51 PEDIVKLDANE--NPYG-PPPEVLEALGNM-KFP--YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV- 123 (380)
T ss_pred ccceEEccCCC--CCCC-CCHHHHHHHHhh-Hhh--ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh-
Confidence 56889998884 4554 667788887542 221 12333335677777777777 7889999999999999988742
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
..+++.|++.+++|.. +.......|..+..++....... |++++++.++. +++++++++.++
T Consensus 124 -~~~gd~Vlv~~P~y~~-y~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~~--~~~~~v~l~~P~ 185 (380)
T PLN03026 124 -LDPGDKIIDCPPTFGM-YVFDAAVNGAEVIKVPRTPDFSL--------------DVPRIVEAVET--HKPKLLFLTSPN 185 (380)
T ss_pred -cCCCCEEEEcCCChHH-HHHHHHHcCCEEEEeecCCCCCc--------------CHHHHHHHHhc--cCCcEEEEeCCC
Confidence 3456789999998863 33333444554444332211111 78999888842 346666666667
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc-ccccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~-~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
|++|...+ .+++.++++.. +++|+||+|.+| ..+.... .+..+...-+.||||.++ +|+|+||+++++++++
T Consensus 186 NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~ 260 (380)
T PLN03026 186 NPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIE 260 (380)
T ss_pred CCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHH
Confidence 77788877 66777777654 899999999877 4332111 111112222459999999 8999999999999998
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+.... ..++.+.+++.++.++++..+. ++.++.++++.+++.+.|+++ +........|+++++.+...
T Consensus 261 ~l~~~~-----~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~~~f~~~~~~~~- 330 (380)
T PLN03026 261 YLWRAK-----QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEV----PFLEPYPSDANFILCRVTSG- 330 (380)
T ss_pred HHHHhc-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCeECCCCCeEEEEECCCC-
Confidence 876422 1355677888888877753211 445556666666666666654 43222344578888876421
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
.+..++.+.|.++||.+.++. .+.+|+++. +.++++++++.|+++
T Consensus 331 ------------~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 331 ------------RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred ------------CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 123678899999999998863 245888877 667889999888754
No 159
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=1.3e-25 Score=209.95 Aligned_cols=322 Identities=22% Similarity=0.251 Sum_probs=215.9
Q ss_pred CEEEeccCCccccccCC-CcHHHHHHHHHHHHcCCC-------CCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~-------~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~ 107 (411)
+.|++|.++ .++|+ +||++++++.++++++.. ..+..+..+++.+.+++.++. ++.+++++|++++..
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~iv~~sg~~a~~~ 76 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGK-EAALVFSSGYAANDG 76 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCC-CCEEEeccHHHHHHH
Confidence 468999999 99999 699999999999987321 113477778899999888863 456677788999998
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC--CCcEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIA 185 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~--~~~~~ 185 (411)
+++.+ ..+++.|++.++.|. .....+...|.. +..++..|.+++++.+++. +.+++
T Consensus 77 ~~~~~--~~~gd~Vl~~~~~~~-~~~~~~~~~g~~-------------------~~~~~~~~~~~le~~i~~~~~~~~~~ 134 (349)
T cd06454 77 VLSTL--AGKGDLIISDSLNHA-SIIDGIRLSGAK-------------------KRIFKHNDMEDLEKLLREARRPYGKK 134 (349)
T ss_pred HHHHh--cCCCCEEEEehhhhH-HHHHHHHHcCCc-------------------eEEecCCCHHHHHHHHHHhhccCCCe
Confidence 87643 245566777655544 333333333332 2222333788889888753 24678
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-c-cccCc-cccccCCCcch--hhhhhhccCCccc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGG-AQEYFGVTPDL--TTLGKIIGGGLPV 259 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~-~g~~~-~~~~~~~~~d~--~~~sK~~~~G~~~ 259 (411)
+++++++++++|...+ +++|.++|++||+++|+||+|+ |. . .+... .........|+ .|++|++++ +.
T Consensus 135 ~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~g 208 (349)
T cd06454 135 LIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA--VG 208 (349)
T ss_pred EEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc--cC
Confidence 8889888888998887 9999999999999999999996 43 2 12111 01111122343 489999985 55
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeec
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 338 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g 338 (411)
|+++.++++++.+......+. .+.+.++..++++.++++.+.. ++.+++++++.+++.+.|+++ +......+.+
T Consensus 209 G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~~~ 283 (349)
T cd06454 209 GYIAGSKELIDYLRSYARGFI-FSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL----GFPVGGSPSH 283 (349)
T ss_pred CEEECCHHHHHHHHHhchhhh-ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc----CCcccCCCCC
Confidence 888888888877754222221 2335667778888888887655 556777788888888877765 3221112223
Q ss_pred ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-------Ccceeee--cCCCHHHHHHHHHHHHHH
Q 015230 339 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTS--LAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-------~~~~~~~--~~~t~~~i~~~i~~l~~~ 407 (411)
.+.++.+ ++..+..++.+.|.++||.+.+++ .+.+|++ ...+++++++++++|+++
T Consensus 284 ~~~~~~~-------------~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 284 IIPPLIG-------------DDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred cEEEEeC-------------CChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 3333322 112334789999999999997642 2357774 447999999999999864
No 160
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=5.8e-26 Score=214.77 Aligned_cols=334 Identities=17% Similarity=0.138 Sum_probs=217.5
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CC---CCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SF---GAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~---~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~ 107 (411)
..++||..+. +.-..++.+.+++.+.+.... .| .+..++++.+++++.+.++ .++ +|++|+|+++|+..
T Consensus 24 ~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~ 100 (387)
T PRK07777 24 TGAVNLGQGF---PDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAA 100 (387)
T ss_pred CCeEEccCCC---CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHH
Confidence 3578988884 222245678888877776522 22 2346778888888877765 244 79999999999998
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC-CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
++... ..+++.|++..++|+... .+....|..+..++.... .++. -|++++++.++ +++++
T Consensus 101 ~~~~~--~~~gd~vli~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~~~~------------~d~~~l~~~~~---~~~~~ 162 (387)
T PRK07777 101 AVLGL--VEPGDEVLLIEPYYDSYA-AVIAMAGAHRVPVPLVPDGRGFA------------LDLDALRAAVT---PRTRA 162 (387)
T ss_pred HHHHh--cCCCCEEEEeCCCchhhH-HHHHHCCCEEEEeecCCccCCCc------------CCHHHHHHhcC---cccEE
Confidence 88642 356678999898887643 334444544333332211 1111 17888888776 24666
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Ccccccc----CCCcchhhhhhhcc-CCccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF----GVTPDLTTLGKIIG-GGLPV 259 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~~----~~~~d~~~~sK~~~-~G~~~ 259 (411)
|++++.+|++|... +.+.+++|.++|++|++++|+||+|.++ ..+. ......+ +...-+.||||.|+ +|+|+
T Consensus 163 v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRi 241 (387)
T PRK07777 163 LIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKI 241 (387)
T ss_pred EEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCcee
Confidence 66666666777765 4555999999999999999999999877 3332 1111111 11222558999998 79999
Q ss_pred ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee
Q 015230 260 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 337 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 337 (411)
||+++++++++.+.... ...++..+.+.+.++..+++..+. +++++.++++.+++.+.|++. ++.......
T Consensus 242 G~~~~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~g 314 (387)
T PRK07777 242 GWACGPAPLIAAVRAAK---QYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GFEVHDSAG 314 (387)
T ss_pred EEEecCHHHHHHHHHHH---hhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CCCccCCCc
Confidence 99999998888776321 222344455555555555532111 345566677777777777654 332223345
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC---------CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~---------~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
|+++|+++..... .+..++++.|. ++||.|.|+. .+.+|+++..+++++++++++|.++
T Consensus 315 ~~~~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~ 383 (387)
T PRK07777 315 TYFLCADPRPLGY-----------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRAL 383 (387)
T ss_pred ceEEEecccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 7788887642110 12367888886 5799998873 1258998888999999999999987
Q ss_pred HH
Q 015230 408 LR 409 (411)
Q Consensus 408 ~~ 409 (411)
..
T Consensus 384 ~~ 385 (387)
T PRK07777 384 RG 385 (387)
T ss_pred hc
Confidence 54
No 161
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=8e-26 Score=211.97 Aligned_cols=322 Identities=14% Similarity=0.120 Sum_probs=206.5
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
.++++..|. ++++ .+|.+.+++.+.+.....|+ ......+.+.+++.++ .+++|++|+|+++++..+++.. .
T Consensus 33 ~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y~--~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~--~ 105 (369)
T PRK08153 33 FRARIGANE--SGFG-PSPSVIAAMREAAAEIWKYG--DPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLY--V 105 (369)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcCC--CCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh--c
Confidence 457888873 2333 78889999988776533333 2224566666666666 6789999999999999988742 3
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEE-cccCC
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVG 194 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~-~~~~~ 194 (411)
.+++.|++.+++|+..... ....|..+..++.. ... .|++++++.+.. ++++++++ +|+|
T Consensus 106 ~~gd~vlv~~p~y~~~~~~-~~~~g~~~~~vp~~--~~~-------------~~~~~l~~~~~~--~~~~~i~l~~P~N- 166 (369)
T PRK08153 106 EPGDPVVTSLGAYPTFNYH-VAGFGGRLVTVPYR--DDR-------------EDLDALLDAARR--ENAPLVYLANPDN- 166 (369)
T ss_pred CCCCEEEECCCcchHHHHH-HHHcCCeEEEeeCC--CCC-------------CCHHHHHHHhcc--cCCcEEEEeCCCC-
Confidence 4567888888888764332 22334433332221 111 167777666542 24455544 5544
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcc---hhhhhhhcc-CCcccccccccHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRDIM 269 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~~~~~~ 269 (411)
++|.+.+ .+.+++|.++|+ ++++||+||+|..| ..+....+. ...++ +.||||.++ +|+|+||++++++++
T Consensus 167 PtG~~~~-~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~ 242 (369)
T PRK08153 167 PMGSWHP-AADIVAFIEALP-ETTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTI 242 (369)
T ss_pred CCCCCCC-HHHHHHHHHhCC-CCcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcchheeeeecCHHHH
Confidence 4566655 333777777776 49999999999877 433221111 11223 459999998 899999999999998
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
+.+.... .+++.++++++++.++++ +++..++.++..+..++.+.+.....++. .....|+++++++..
T Consensus 243 ~~l~~~~-----~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~-- 311 (369)
T PRK08153 243 KAFDKVR-----NHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGR-- 311 (369)
T ss_pred HHHHHhh-----cCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCC--
Confidence 8876422 246678899999888875 22333444444444444444433333432 223457788887631
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEec-cCC---CcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFA-PSQ---FEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~-~~~---~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+...+..+.+.|.++||.+. |+. ...+|+++. ++++++.++++|++++..
T Consensus 312 ----------~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~-~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 312 ----------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG-PDEELDLFAEALPEALEA 365 (369)
T ss_pred ----------CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 11234788999999999995 542 246888877 789999999999998754
No 162
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=4.4e-26 Score=212.62 Aligned_cols=314 Identities=16% Similarity=0.163 Sum_probs=211.1
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
.+++||.++. ++++ .+|++++++.+++.....|+.+. ..++.+.+++.++ .++++++++|+++++..+++..
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y~~~~--~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l-- 91 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRYPDPD--PAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF-- 91 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcCCCCC--HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh--
Confidence 4799999883 2333 78899999998876533333222 3567777777776 6789999999999998887643
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
..+++.|++.+++|.. +.......|..+..++.... +. .|++++++.+. +++++++++..+|
T Consensus 92 ~~~gd~v~~~~p~y~~-~~~~~~~~g~~~~~~~~~~~-~~-------------~d~~~l~~~~~---~~~~~v~l~~p~N 153 (346)
T TIGR01141 92 LEPGDAVLVPPPTYSM-YEISAKIHGAEVVKVPLDED-GQ-------------LDLEDILVAID---DKPKLVFLCSPNN 153 (346)
T ss_pred cCCCCEEEEcCCCHHH-HHHHHHHcCCeEEEeccCCC-CC-------------CCHHHHHHhcC---CCCCEEEEeCCCC
Confidence 3456788888888753 22333344544444332211 11 18888888754 3567777776677
Q ss_pred CCCccCCCHHHHHHHHHHHHHh--CCEEEEecccccc-ccccCccccccCCCcc---hhhhhhhcc-CCcccccccccHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRD 267 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~--~~~li~De~~~g~-~~g~~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~~~~ 267 (411)
++|...+ ++++.++|+.+ ++++|+||+|.++ ..+... +.....++ +.|+||+++ +|+|+||++++++
T Consensus 154 ptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 154 PTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 7888887 66666666655 9999999999876 322111 11111223 348999997 6899999999999
Q ss_pred HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 268 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
+++.+.... .+++.+++++.++.++++.... ++.+++++++.+++++.|+++ +........|.++|+++.
T Consensus 228 ~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~g~~~~~~~g~~~~~~~~ 298 (346)
T TIGR01141 228 IIDALNKVR-----APFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL----PGLEVYPSDANFVLIRFP 298 (346)
T ss_pred HHHHHHhcc-----CCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCEECCCcCCEEEEecC
Confidence 988887422 2456678888888777654321 445566666666676666654 222222345788888773
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----cceeeecCCCHHHHHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----~~~~~~~~~t~~~i~~~i~~l~ 405 (411)
. +++++.+.|.++||.+.++.. +.+|+++. ++++++++++.|+
T Consensus 299 ~---------------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 299 R---------------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred C---------------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 2 236789999999999998752 45788866 7899999998763
No 163
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.6e-25 Score=212.41 Aligned_cols=341 Identities=16% Similarity=0.134 Sum_probs=222.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~ 106 (411)
.+..++||..+. +....++++.+++.+.+... ..|+ +...+++.+++++.+.++ .++++++|+|+++|+.
T Consensus 29 ~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~ 105 (393)
T PRK05764 29 QGRDVISLGAGE---PDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALY 105 (393)
T ss_pred ccCCEEEeCCCC---CCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHH
Confidence 355688998884 32226788999998888753 2232 236677888888876654 4688999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++... ..+++.|++.+++|.+. .......|..+..++.....++. -|++.+++.++. ++++
T Consensus 106 ~~~~~~--~~~gd~vl~~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~l~~---~~~~ 167 (393)
T PRK05764 106 NAFMAL--LDPGDEVIIPAPYWVSY-PEMVKLAGGVPVFVPTGEENGFK------------LTVEQLEAAITP---KTKA 167 (393)
T ss_pred HHHHHh--cCCCCEEEecCCCCcch-HHHHHHcCCEEEEEecCcccCCc------------CCHHHHHHhhCc---cceE
Confidence 988743 44567888888888754 33334445544443332111111 178899888852 4455
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccc----cccCCCcchhhhhhhcc-CCcc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQ----EYFGVTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~----~~~~~~~d~~~~sK~~~-~G~~ 258 (411)
+++...+|++|.+.+ .+.+++|.++|++|++++|+||+|.++ ..+.. ... +..+....+.||||.++ .|+|
T Consensus 168 v~~~~p~NPtG~~~~-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R 246 (393)
T PRK05764 168 LILNSPSNPTGAVYS-PEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWR 246 (393)
T ss_pred EEEECCCCCCCcccC-HHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccce
Confidence 454444555666654 344999999999999999999999877 33321 111 11122233558999999 7999
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+||+++++++++.+.... ...+...+++++.++.+.++.... ++++++++++.+.+++.|+++ . ++......
T Consensus 247 iG~i~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~ 320 (393)
T PRK05764 247 LGYAAGPKELIKAMSKLQ---SHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI-P--GLECPKPE 320 (393)
T ss_pred eEEEecCHHHHHHHHHHH---hhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC-C--CCcccCCC
Confidence 999999999988876321 222456677888887777752111 344555556666666666553 0 22222233
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC----cceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.|+++|+.+...... ......++.+.+. ++||.+.++.. +.+|+++..+++++++++++|.+++++
T Consensus 321 g~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 321 GAFYVFPNVSKLLGK--------SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred cceEEEEeccccccc--------ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 466888877532110 0011256776664 57999998742 458999888999999999999998875
No 164
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=1.8e-25 Score=212.26 Aligned_cols=343 Identities=13% Similarity=0.060 Sum_probs=215.8
Q ss_pred CCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACM 106 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~ 106 (411)
|+.++++..+...+...+ .++.+.+++.+.+.... .| .+..++++++++++.+... .+++|++|+|+++++.
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~ 109 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIE 109 (401)
T ss_pred CCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHH
Confidence 567889888832111123 67889999888877632 23 2335677788888765322 5789999999999999
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++... ..+++.|++.+++|... .......|..+..++........ -|++.+++.++. ++++
T Consensus 110 ~~~~~l--~~~gd~v~i~~P~y~~~-~~~~~~~g~~v~~~~~~~~~~~~------------~d~~~l~~~~~~---~~~~ 171 (401)
T TIGR01264 110 MCIAAL--ANAGQNILVPRPGFPLY-ETLAESMGIEVKLYNLLPDKSWE------------IDLKQLESLIDE---KTAA 171 (401)
T ss_pred HHHHHh--CCCCCEEEEeCCCChhH-HHHHHHcCCEEEEeecCCccCCC------------CCHHHHHHHhcc---CceE
Confidence 998753 34567899999888754 33344445444443322111110 078999887763 3455
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccc-cccCC--Ccchhhhhhhcc-CCcccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EYFGV--TPDLTTLGKIIG-GGLPVG 260 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~-~~~~~--~~d~~~~sK~~~-~G~~~g 260 (411)
+++...+|++|...+ .+.+++|.++|+++|+++|+||+|.+| ..+.. ... ..... ..-+.||||.++ +|+|+|
T Consensus 172 v~~~~p~NPtG~~~~-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG 250 (401)
T TIGR01264 172 LIVNNPSNPCGSVFS-RQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLG 250 (401)
T ss_pred EEEcCCCCCCCCCCC-HHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEE
Confidence 555444555665544 445999999999999999999999988 44421 111 11111 122458999987 799999
Q ss_pred cccccH------HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH-hc--CChHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015230 261 AYGGRR------DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGIIDAGKKAGHA 331 (411)
Q Consensus 261 ~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~-~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (411)
|+++++ ++++.+... ....++.+++++.++.++++.. +. ++.++.++++.+++.+.|+++ .++.
T Consensus 251 ~iv~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~---~~~~ 323 (401)
T TIGR01264 251 WIIIHDRRGILRDIRDGLVKL----SQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV---PGLR 323 (401)
T ss_pred EEEecCcchhHHHHHHHHHHH----hhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC---CCCc
Confidence 998763 344444311 1113455778888877777531 11 334445555555555555543 1222
Q ss_pred eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHH
Q 015230 332 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 332 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
......|+++|+++..... +......++.+.+. ++||.+.|+. .+.+|+++..+++++++++++|.+
T Consensus 324 ~~~p~~g~f~~~~~~~~~~--------~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~ 395 (401)
T TIGR01264 324 PVMPSGAMYMMVGIEMEHF--------PEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQE 395 (401)
T ss_pred ccCCCeeeEEEEEeccccc--------CCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 2234568999998753100 01111256667765 7899999874 245799888889999999999999
Q ss_pred HHHhC
Q 015230 407 VLRQI 411 (411)
Q Consensus 407 ~~~~~ 411 (411)
+++++
T Consensus 396 ~~~~~ 400 (401)
T TIGR01264 396 FCERH 400 (401)
T ss_pred HHhcc
Confidence 98764
No 165
>PRK07550 hypothetical protein; Provisional
Probab=99.95 E-value=1.1e-25 Score=212.70 Aligned_cols=333 Identities=16% Similarity=0.111 Sum_probs=216.9
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 105 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~ 105 (411)
.+..++||.++.. ++ ..++.+.+++.+.+.... .| .+..++++.+++++.+..+ .+++|++|+|+++|+
T Consensus 27 ~~~~~i~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al 103 (386)
T PRK07550 27 ADGPLIDLSQAVP--GY-PPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF 103 (386)
T ss_pred cCCCeEEeCCCCC--CC-CCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence 3556899998842 22 257788888887765421 22 2457788899999987754 578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..++.+. ...++.|++..++|.... ......|..+..++.....+.. .|.+++++.++. +...
T Consensus 104 ~~~~~~l--~~~gd~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~------------~~~~~l~~~~~~--~~~~ 166 (386)
T PRK07550 104 WAAMVTL--AGAGDEVILPLPWYFNHK-MWLDMLGIRPVYLPCDEGPGLL------------PDPAAAEALITP--RTRA 166 (386)
T ss_pred HHHHHHh--cCCCCEEEEcCCCCcchH-HHHHhcCCEEEEEecCCCcCCC------------CCHHHHHHHhcc--cCcE
Confidence 9888753 346778888888887543 3334445444443332111211 178889988873 2334
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Cc-ccccc---CCCcchhhhhhhcc-CCcc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GG-AQEYF---GVTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~-~~~~~---~~~~d~~~~sK~~~-~G~~ 258 (411)
+++++|. |++|...+ .+.+++|.++|++|++++|+||+|.+| ..+. .. ..... .....+.||||.++ +|+|
T Consensus 167 v~~~~P~-NPtG~~~~-~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 167 IALVTPN-NPTGVVYP-PELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEEeCCC-CCCCcccC-HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 4555554 55665544 555999999999999999999999877 3221 11 11111 11233569999998 8999
Q ss_pred cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 259 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
+||+++++++++.+.. .....+.+.+.+++.++..+++.+.+ ++.++.++++.+++.+.|++. +.......
T Consensus 245 iG~i~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~ 317 (386)
T PRK07550 245 VGAVVASPARIAEIEK---FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL----PGWELLAS 317 (386)
T ss_pred eEeeecCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC----CCceeCCC
Confidence 9999999888877763 12223445577777777776654322 344455666666666666553 21122234
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC------CcceeeecC-CCHHHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKV 407 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~------~~~~~~~~~-~t~~~i~~~i~~l~~~ 407 (411)
.|+++|+.+... ..+..++++.| .++||.+.|+. ...+|+++. .+++++++++++|.+.
T Consensus 318 g~~~~~~~~~~~------------~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 318 GAYFAYVRHPFP------------DRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ceEEEEecCCCC------------CCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 567888877421 11236777776 46799999863 345898776 4789999999999864
No 166
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=7.1e-26 Score=211.51 Aligned_cols=325 Identities=15% Similarity=0.138 Sum_probs=210.7
Q ss_pred cCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRL 111 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~ 111 (411)
.++..++||..|. +++| .++.+++++.+.+..... |+......+.+.+++.++ .+++|++|+|+++++..+++.
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~--y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAER--YPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSG 91 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhccc--CcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH
Confidence 3467789999874 5555 778899999887776433 333335677777777776 788999999999999988874
Q ss_pred HHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcc
Q 015230 112 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 191 (411)
Q Consensus 112 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~ 191 (411)
+.+ +++++.+++|... .......|..+..++.....++.. | +++.+.+. ++++++++..
T Consensus 92 ---l~~-g~viv~~P~y~~~-~~~~~~~g~~~~~v~~~~~~~~~~------------~-~~~~~~~~---~~~k~v~l~~ 150 (356)
T PRK08056 92 ---LKP-RRAMIVTPGFAEY-RRALQQVGCEIRRYSLREADGWQL------------T-DAILEALT---PDLDCLFLCT 150 (356)
T ss_pred ---hCC-CCEEEeCCCcHHH-HHHHHHcCCeEEEEecccccCCCc------------c-HHHHHhcc---CCCCEEEEeC
Confidence 233 3578888887643 333444555544443322222210 3 33444443 3455655554
Q ss_pred cCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccccccCCCcchhhhhhhcc-CCcccccccc-cH
Q 015230 192 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGG-RR 266 (411)
Q Consensus 192 ~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~-~~ 266 (411)
.+|++|.. .+++.+++|.++|++|++++|+||+|.+| ..+.. ......+...-+.||||.++ +|+|+||+++ ++
T Consensus 151 p~NPTG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~ 229 (356)
T PRK08056 151 PNNPTGLL-PERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD 229 (356)
T ss_pred CcCCCCCC-CCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCH
Confidence 45556664 45666999999999999999999999887 43321 11111222223458999999 8999999987 56
Q ss_pred HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 267 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 267 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
++++.+... ...++.+.+++.++..+++.-.. ++.++.++++.+++.+.|+++ +........|+++|+.+
T Consensus 230 ~~~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~~~~ 300 (356)
T PRK08056 230 AAVARMRRQ-----QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL----PLLTVWPGRANYLFLRC 300 (356)
T ss_pred HHHHHHHHh-----CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcEEcCCCCcEEEEEc
Confidence 777777531 12455666777777666631111 344455666666666666543 22222234588888877
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC------cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
... ..++.+.|.++||.+.++.. +.+|+++. +.++.+.+++.|+++++
T Consensus 301 ~~~---------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 301 ERP---------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNVLT 354 (356)
T ss_pred CCC---------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHHHc
Confidence 321 25788899999999988742 35788865 67889999999988764
No 167
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=2.7e-25 Score=211.46 Aligned_cols=347 Identities=13% Similarity=0.038 Sum_probs=221.2
Q ss_pred EEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC--CCCC---CCCHHHHHHHHHHHhhC--------C-CCCE
Q 015230 30 MWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAV--------P-SIEM 94 (411)
Q Consensus 30 ~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~--~~~~---~~~~~~~~l~~~l~~~~--------~-~~~~ 94 (411)
+.+..|+.+++|..+.......+ .++.+++++.+.++.. ..|+ +..++++.+++++.+.+ . .+++
T Consensus 27 ~~~~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~ 106 (412)
T PTZ00433 27 KPSPSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDN 106 (412)
T ss_pred ccCCCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhh
Confidence 44468889999999832111113 6788999998887752 2332 34678888888887643 1 5789
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
|++|+|+++++..+++.. ..+++.|++..++|+.. .......|..+..++........ -|+++++
T Consensus 107 i~it~G~~~al~~~~~~~--~~~gd~vlv~~P~y~~~-~~~~~~~g~~~~~i~~~~~~~~~------------~d~~~l~ 171 (412)
T PTZ00433 107 VVLCSGVSHAILMALTAL--CDEGDNILVPAPGFPHY-ETVCKAYGIEMRFYNCRPEKDWE------------ADLDEIR 171 (412)
T ss_pred EEEeCChHHHHHHHHHHh--cCCCCEEEEccCCcccH-HHHHHHcCCEEEEEecCccccCc------------CCHHHHH
Confidence 999999999999998853 34567899999998864 34444445544443332111110 1788888
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccC-C--Ccchhhh
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG-V--TPDLTTL 249 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~-~--~~d~~~~ 249 (411)
+.++. +++++++...+|++|...+ .+.+++|.++|++||++||+||+|.+| ..+.. .....+. . ..-+.||
T Consensus 172 ~~~~~---~~~~i~~~~p~NPtG~~~s-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~Sf 247 (412)
T PTZ00433 172 RLVDD---RTKALIMTNPSNPCGSNFS-RKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGT 247 (412)
T ss_pred HHhcc---CceEEEEeCCCCCCCcccC-HHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccc
Confidence 87763 4555555444555665554 444999999999999999999999987 43321 1111111 1 1224589
Q ss_pred hhhcc-CCcccccccc------cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH-hc--CChHHHHHHHHHHHHH
Q 015230 250 GKIIG-GGLPVGAYGG------RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQ 319 (411)
Q Consensus 250 sK~~~-~G~~~g~~~~------~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~-~~--~~~~~~~~~~~~~~~~ 319 (411)
||.++ +|+|+||+++ .+++++.+.... ...++.+.+++.++.+++..- +. ++.++.++++.+.+.+
T Consensus 248 SK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~----~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~ 323 (412)
T PTZ00433 248 AKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLG----MLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYN 323 (412)
T ss_pred hhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHh----hccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99996 7999999975 245666654211 123466778888877776531 11 3344445555555555
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC----CcceeeecCCCH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSS 394 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~----~~~~~~~~~~t~ 394 (411)
.|++. .+........|+++|+.+...... ......++.+.|. ++||.+.++. .+.+|+++...+
T Consensus 324 ~L~~~---~~~~~~~p~gg~f~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~ 392 (412)
T PTZ00433 324 HIGEC---IGLSPTMPRGSMFLMSRLDLEKFR--------DIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPV 392 (412)
T ss_pred HHhcC---CCCcccCCCeeEEEEEEechhhcC--------CCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCH
Confidence 55432 122222344588999987431100 0001256778876 5799999974 245899888889
Q ss_pred HHHHHHHHHHHHHHHh
Q 015230 395 DDIQHTITAAEKVLRQ 410 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~~ 410 (411)
+++++++++|.++++.
T Consensus 393 e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 393 EVLREAVERIKAFCER 408 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998764
No 168
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=7.3e-26 Score=212.31 Aligned_cols=316 Identities=14% Similarity=0.077 Sum_probs=205.5
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC----CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~----~~~~v~~~~~g~~a~~ 106 (411)
++..++||..+ .+....++.+++++.+.... ..|+ +..++++.+++++.+.++ .+++|++|+|+++++.
T Consensus 25 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~ 100 (364)
T PRK07865 25 HPDGIVDLSVG---TPVDPVPPVIQEALAAAADA-PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVA 100 (364)
T ss_pred cCCCEEEcCCC---CCCCCCCHHHHHHHHHHHhh-CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHH
Confidence 45568999888 45443567788888765443 2332 346788999999988754 3789999999999998
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++.+. ...+++.|++.+++|...... ....|..+. .++ +.++++. .++++
T Consensus 101 ~~~~~l-~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~-------------------~~~--~~~~l~~------~~~~~ 151 (364)
T PRK07865 101 WLPTLL-GLGPGDVVVIPELAYPTYEVG-ARLAGATVV-------------------RAD--SLTELGP------QRPAL 151 (364)
T ss_pred HHHHHH-cCCCCCEEEECCCCcccHHHH-HHhcCCEEE-------------------ecC--ChhhCCc------ccceE
Confidence 876532 235678899999888754322 223333211 111 3333321 35667
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccc------cCCCcchhhhhhhcc-CCc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY------FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~------~~~~~d~~~~sK~~~-~G~ 257 (411)
+++++.+|++|.+.+. +.+++|.++|++|+++||+||+|.++ ..+.. ..+.. .+...-+.||||.++ +|+
T Consensus 152 v~~~~p~NPtG~~~~~-~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~Gl 230 (364)
T PRK07865 152 IWLNSPSNPTGRVLGV-DHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGY 230 (364)
T ss_pred EEEcCCCCCCCccCCH-HHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCce
Confidence 6666666667766653 44999999999999999999999877 43321 11111 011122458999997 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
|+||+++++++++.+... .....+..+.+.+.++.++++..+. ++.++.++++.+.+.+.|++. ++......
T Consensus 231 RiG~i~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~ 303 (364)
T PRK07865 231 RAGFVAGDPALVAELLEV---RKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA----GFRVDHSE 303 (364)
T ss_pred eeEEEecCHHHHHHHHHH---HHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc----CCcccCCC
Confidence 999999999998887631 1222445677777777666642111 334445555555555555543 43333334
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~ 405 (411)
.|+++|+.+.. ....+.+.|.++||.+.|+. .+.+|++++.+++++++++++|+
T Consensus 304 ~~~~~~~~~~~---------------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 304 AGLYLWATRGE---------------DCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred ccEEEEEeCCC---------------CHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 46678886621 12467788899999998863 23588988778999999999885
No 169
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=2e-25 Score=212.11 Aligned_cols=342 Identities=12% Similarity=0.066 Sum_probs=213.4
Q ss_pred cCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhC--C-CCCEEEEeCChHHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAV--P-SIEMVRFVNSGTEAC 105 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~--~-~~~~v~~~~~g~~a~ 105 (411)
..|+.++||..+.. +++++ .++++.+++.+.+.....|+ +..++++.+++++.... + .+++|++|+|+++++
T Consensus 30 ~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l 108 (404)
T PRK09265 30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELI 108 (404)
T ss_pred HcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHH
Confidence 36778899988732 34465 67789898888766533333 23466777887776433 2 578999999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..+++.. ..+++.|++.+++|....... ...|..+..++.....++. -|++++++.++. +++
T Consensus 109 ~~~~~~~--~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~v~~~~~~~~~~~------------~d~~~l~~~~~~---~~~ 170 (404)
T PRK09265 109 VMAMQAL--LNNGDEVLVPAPDYPLWTAAV-SLSGGKPVHYLCDEEAGWF------------PDLDDIRSKITP---RTK 170 (404)
T ss_pred HHHHHHh--CCCCCEEEEeCCCCcChHHHH-HHcCCEEEEEecccccCCC------------CCHHHHHHhccc---cce
Confidence 9988743 345678999999988644333 3334333332221111111 178888887752 455
Q ss_pred E-EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccc-cccC--CCcchhhhhhhcc-CCcc
Q 015230 186 A-IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EYFG--VTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 186 ~-vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~-~~~~--~~~d~~~~sK~~~-~G~~ 258 (411)
+ ++++| +|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ..+.. ... .... ....+.||||.++ +|+|
T Consensus 171 ~v~l~~P-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 248 (404)
T PRK09265 171 AIVIINP-NNPTGAVYS-KELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFR 248 (404)
T ss_pred EEEEECC-CCCCCcCCC-HHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccc
Confidence 4 55555 556676555 344999999999999999999999877 33321 111 1111 1122458999996 7999
Q ss_pred cccccc--cHH----HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChH---HHHHHHHHHHHHHHHHHHHhc
Q 015230 259 VGAYGG--RRD----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTY---EYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 259 ~g~~~~--~~~----~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~---~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+||+++ ++. +++.+.. ....+++.+.+++.++.+++...+. +++. .++.++.+++.+.|+++ .
T Consensus 249 iG~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~---~ 321 (404)
T PRK09265 249 VGWMVLSGPKKHAKGYIEGLDM----LASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI---P 321 (404)
T ss_pred eEEEEEeCchHHHHHHHHHHHH----HhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 999974 443 3333321 1122456677788887777642111 1121 23444444454555432 0
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTIT 402 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~ 402 (411)
+........|+++|+.+..... +...+.+.+.+.+.++||.+.|+. .+.+|+++..++++++++++
T Consensus 322 ~~~~~~p~~g~~l~~~~~~~~~--------~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~ 393 (404)
T PRK09265 322 GVSCVKPKGALYAFPKLDPKVY--------PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIG 393 (404)
T ss_pred CCcccCCCcceEEEEEeccccc--------CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 2222334558899988853210 001223567788899999998873 23578988889999999999
Q ss_pred HHHHHHHh
Q 015230 403 AAEKVLRQ 410 (411)
Q Consensus 403 ~l~~~~~~ 410 (411)
+|.++++.
T Consensus 394 rl~~~l~~ 401 (404)
T PRK09265 394 RIGRFLSG 401 (404)
T ss_pred HHHHHHHH
Confidence 99998764
No 170
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=1.9e-25 Score=208.28 Aligned_cols=319 Identities=15% Similarity=0.178 Sum_probs=207.2
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
..++||..+. ++.+ .++.+.+++.+.+.....| ++....++.+.+++.++ .+++|++|+|+++++..+++.
T Consensus 19 ~~~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~Y--~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~--- 90 (354)
T PRK06358 19 NMILDFSANI--NPLG-VPESLKQAITENLDKLVEY--PDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV--- 90 (354)
T ss_pred cceEEecCCC--CCCC-CCHHHHHHHHHHHHhhhcC--CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH---
Confidence 4578998774 4455 4788999998887654333 33234566666666666 789999999999999998874
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE-EEEcccC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA-IILEPVV 193 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~-vi~~~~~ 193 (411)
+ .++.|++..++|+... ......|..+..++.....++.. | +++.+.+. .++++ ++++| +
T Consensus 91 ~-~~~~v~i~~P~y~~~~-~~~~~~g~~~~~~~~~~~~~~~~------------d-~~~~~~~~---~~~~~v~~~~P-~ 151 (354)
T PRK06358 91 T-KPKKVLILAPTFAEYE-RALKAFDAEIEYAELTEETNFAA------------N-EIVLEEIK---EEIDLVFLCNP-N 151 (354)
T ss_pred h-CCCcEEEecCChHHHH-HHHHHcCCeeEEEeCccccCCCc------------c-HHHHHhhc---cCCCEEEEeCC-C
Confidence 3 3367899999998543 33344455444433321112110 5 44444443 23444 45666 4
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccC---CCcchhhhhhhcc-CCcccccccc-cH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFG---VTPDLTTLGKIIG-GGLPVGAYGG-RR 266 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~---~~~d~~~~sK~~~-~G~~~g~~~~-~~ 266 (411)
|++|... +.+.+++|.++|++|++++|+||+|.+| ..+.. ......+ ...-+.||||.++ +|+|+||+++ ++
T Consensus 152 NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~ 230 (354)
T PRK06358 152 NPTGQLI-SKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK 230 (354)
T ss_pred CCCCCcc-CHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH
Confidence 5555544 4555999999999999999999999988 43321 1111111 1223458999999 8999999987 56
Q ss_pred HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 267 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 267 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
.+++.+.... ..++.+.+++.++.++++.-.. ++.++.++++.+++.+.|+++ +......+.|.++|+.+
T Consensus 231 ~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~g~f~~~~~ 301 (354)
T PRK06358 231 NLAEKLLQMR-----EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF----KGIKVYKPSVNFIFFKL 301 (354)
T ss_pred HHHHHHHHhC-----CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC----CCcEEcCCcceEEEEEc
Confidence 7777776322 2456677888888777742111 334455566666666666543 32222234577888876
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC------cceeeecCCCHHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
.+ . .++.+.|.++||.+.++.. +.+|+++. +.++.++++++|++++
T Consensus 302 ~~-------------~---~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~-~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 302 EK-------------P---IDLRKELLKKGILIRSCSNYRGLDENYYRVAVK-SREDNKKLLKALEVIL 353 (354)
T ss_pred Cc-------------h---HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 32 1 5788999999999999732 34788744 6788999999998875
No 171
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=2.9e-25 Score=210.08 Aligned_cols=334 Identities=13% Similarity=0.128 Sum_probs=215.8
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-CCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~ 107 (411)
+..+++|..+. ..+. .++.+.+++.+.+... ..|. +..++++.+++++.+.++ .++++++|+|+++|+..
T Consensus 29 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~ 105 (388)
T PRK07337 29 GRDIIHMGIGE--PDFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL 105 (388)
T ss_pred CCCEEEeCCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence 45678888873 1222 5778889988887652 2232 346788899998877654 57899999999999998
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v 187 (411)
++... ..+++.|++.+++|...... ....|..+..++.....++.. |++++++.++. ....++
T Consensus 106 ~~~~l--~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~~~------------~~~~l~~~~~~--~~~~v~ 168 (388)
T PRK07337 106 ACLAL--VERGDEVLMPDPSYPCNRHF-VAAAEGRPVLVPSGPAERFQL------------TAADVEAAWGE--RTRGVL 168 (388)
T ss_pred HHHHh--cCCCCEEEEeCCCchhhHHH-HHHcCCEEEEeecCCccCCcC------------CHHHHHhhcCc--cceEEE
Confidence 88743 45678899999999865433 333444444433321111110 78888887762 233444
Q ss_pred EEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccccCCCcc---hhhhhhhcc-CCccccc
Q 015230 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPD---LTTLGKIIG-GGLPVGA 261 (411)
Q Consensus 188 i~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~~~~~d---~~~~sK~~~-~G~~~g~ 261 (411)
+++| +|++|...+ .+.+++|.++|++|++++|+||+|.++ ..+.. ... ...++ +.||||.++ +|+|+||
T Consensus 169 l~~p-~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~---~~~~~vi~~~S~SK~~~~~G~RiG~ 243 (388)
T PRK07337 169 LASP-SNPTGTSIA-PDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSAL---SLGDDVITINSFSKYFNMTGWRLGW 243 (388)
T ss_pred EECC-CCCCCcCcC-HHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChh---hccCCEEEEEechhhcCCchhheee
Confidence 4555 455665554 444999999999999999999999877 33321 111 12233 348999997 7999999
Q ss_pred ccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH--Hhc-CChHHHHHHHHHHHHHHHHHHHHhcCCce-EEeee
Q 015230 262 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR--LKE-PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYI 337 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~--~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 337 (411)
+++++++++.+.... .....+.+.+++.++.++++. +.. ++.++.++++.+++.+.|+++ +... .....
T Consensus 244 ~~~~~~l~~~l~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~~~~~~~p~~ 316 (388)
T PRK07337 244 LVVPEALVGTFEKLA---QNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL----GFKVPVMPDG 316 (388)
T ss_pred eecCHHHHHHHHHHH---HHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCe
Confidence 999998888776321 112334566777776666531 111 333455555556666665553 3321 12345
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHH-HHHcCeEeccCC-------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~v~~~~-------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
|+++|+++..... +...+..++.+. +.++||.+.|+. .+.+|+++..+++++++++++|.+++
T Consensus 317 g~f~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 317 AFYVYADCRGVAH--------PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred eEEEEEecccccC--------CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 8899999853210 011122566655 567899998863 24589988888999999999998875
No 172
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.95 E-value=1.2e-25 Score=213.83 Aligned_cols=329 Identities=16% Similarity=0.135 Sum_probs=204.7
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcC------CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG------TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGT 102 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~------~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ 102 (411)
+..++|+..+. .+++ .+|.+.+++.+++... ..| .+..++++.+++++.+..+ .+++|++|+|++
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 56789988883 2233 6788899988887752 122 2346688888888876654 688999999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCC----------CcccCCCCCCCCCCCCCCceeecCCCCHHH
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG----------VATLGLPDSPGVPKGATYETLTAPFNDVSA 172 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 172 (411)
+++..++. .+.+++.|++.+|+|+.....+...+..+ +..++.....++.. |.
T Consensus 110 ~al~~l~~---~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~------------d~-- 172 (409)
T PRK07590 110 CDTGNILD---IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVP------------EL-- 172 (409)
T ss_pred HHHHHHHH---hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcc------------cC--
Confidence 99987543 34577889999999987554443332221 11111110011100 11
Q ss_pred HHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccccccC---CCcch
Q 015230 173 LENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFG---VTPDL 246 (411)
Q Consensus 173 l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~~~---~~~d~ 246 (411)
.+ .+++++++...+|++|.+.+ .+.+++|.++|++|+++||+||+|.+| ..+.. ......+ ....+
T Consensus 173 -----~~--~~~k~i~l~nP~NPTG~~~s-~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~ 244 (409)
T PRK07590 173 -----PE--EKVDIIYLCFPNNPTGTVLT-KEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEF 244 (409)
T ss_pred -----cc--cCceEEEEeCCCCCcCCcCC-HHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEE
Confidence 11 24555554333455565544 455999999999999999999999987 43321 1111111 12335
Q ss_pred hhhhhhcc-CCcccccccccHHHHHHhcCCC--------CcccccC-CCCCHHHHHHHHHHHHH-Hhc--CChHHHHHHH
Q 015230 247 TTLGKIIG-GGLPVGAYGGRRDIMEMVAPAG--------PMYQAGT-LSGNPLAMTAGIHTLKR-LKE--PGTYEYLNKI 313 (411)
Q Consensus 247 ~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~~--------~~~~~~t-~~~~~~~~a~~~~~l~~-~~~--~~~~~~~~~~ 313 (411)
.||||.++ +|+|+||+++++++++.+.... ....... .+.+.+++.++.++++. ... +++++.++++
T Consensus 245 ~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 324 (409)
T PRK07590 245 RSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMEN 324 (409)
T ss_pred ecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 68999998 8999999999998886321000 0001112 24566777777666642 111 3445566666
Q ss_pred HHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------Ccce
Q 015230 314 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAG 386 (411)
Q Consensus 314 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~ 386 (411)
.+++.+.|++. ++.......|+++|+++.+. ....++.+.+. ++||.+.|+. .+.+
T Consensus 325 r~~l~~~L~~~----~~~~~~~~g~~f~wi~~~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i 387 (409)
T PRK07590 325 AKIIREGLESA----GFEVYGGVNAPYIWVKTPDG-------------MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYF 387 (409)
T ss_pred HHHHHHHHHhc----CCceecCCcceEEEEECCCC-------------CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEE
Confidence 66666666654 33222233577999988431 11246666665 5699999873 2358
Q ss_pred eeecCCCHHHHHHHHHHHHHHH
Q 015230 387 FTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 387 ~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
|+++..+++++++++++|.+++
T Consensus 388 Ri~~~~~~~~l~~~l~rl~~~~ 409 (409)
T PRK07590 388 RLSAFGSRENVLEAMERIKKAL 409 (409)
T ss_pred EEEccCCHHHHHHHHHHHHhhC
Confidence 8987779999999999998753
No 173
>PLN02672 methionine S-methyltransferase
Probab=99.95 E-value=2.2e-25 Score=225.37 Aligned_cols=353 Identities=11% Similarity=0.048 Sum_probs=224.0
Q ss_pred EEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CC---CEEEEeCChHHHH
Q 015230 30 MWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI---EMVRFVNSGTEAC 105 (411)
Q Consensus 30 ~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~---~~v~~~~~g~~a~ 105 (411)
+.+.+|..++++..|. ++++ .++.+++++.+.+.......+..+++.++++++++.++ .. ++|++++|+++++
T Consensus 691 ~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 691 VSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 4445678899998884 3444 78899999998876643222355678999999999876 33 4899999999999
Q ss_pred HHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 106 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 106 ~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
..+++.. ..+++.|++..|+|+.. .......|..+..++.....++.. |.+.+++.++.. .+..
T Consensus 768 ~lll~aL--l~pGD~VLVp~PtY~~Y-~~~a~~~Ga~vv~Vpl~~e~gf~l------------D~d~Le~al~~~-~~~~ 831 (1082)
T PLN02672 768 NKLVLCC--VQEGGTLCFPAGSNGTY-VSAAKFLKANFRRIPTKSSDGFKL------------TAKTLASTLETV-KKPW 831 (1082)
T ss_pred HHHHHHH--cCCCCEEEEeCCChHHH-HHHHHHcCCEEEEEecccccCCCC------------CHHHHHHHhccC-CCCE
Confidence 8887632 34567888888888854 444445566555544432223321 788999888632 2346
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-c--c-c---cc-C-----CCcchhhhhh
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-A--Q-E---YF-G-----VTPDLTTLGK 251 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~--~-~---~~-~-----~~~d~~~~sK 251 (411)
+++++|++|++|.+. +++.+++|.++|++||++||+||+|+++ ..+... . . . .+ . ...-+.||||
T Consensus 832 I~L~nPnhNPTG~v~-S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSK 910 (1082)
T PLN02672 832 VYISGPTINPTGLLY-SNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLST 910 (1082)
T ss_pred EEEECcCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHH
Confidence 778888756666654 4555999999999999999999999977 443211 0 0 0 11 1 0112348999
Q ss_pred hcc-CCccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH----Hhc--CChHHHHHHHHHHHHHHHHH
Q 015230 252 IIG-GGLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR----LKE--PGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 252 ~~~-~G~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~----~~~--~~~~~~~~~~~~~~~~~l~~ 323 (411)
.++ +|+|+||++++ +++++.+..... ....+..++.+++++.+++.. +.+ ++.++.++++.+++.+.|++
T Consensus 911 kf~lpGLRIGylIap~~eLi~~l~~~~~--~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~ 988 (1082)
T PLN02672 911 ELLSGGHEFGFLALNDSVLIDAFHSAPG--LSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEA 988 (1082)
T ss_pred hhccHHHHheeEEeCCHHHHHHHHHhhh--hcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 79999999885 458887763211 111222233444444433310 111 23444566666666666665
Q ss_pred HHHhcCCceEEeeecceEEEEEecCCCCCcchhcccc-----hHHHHHHHHHHHHc-CeEeccCCC----cceeeecCCC
Q 015230 324 AGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE-----TTKFARFYRGMLEE-GVYFAPSQF----EAGFTSLAHS 393 (411)
Q Consensus 324 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-Gi~v~~~~~----~~~~~~~~~t 393 (411)
. ++.......|+++|+++.....+... ...++ ..+...+++.|.++ ||.+.|+.. +.+|++++.+
T Consensus 989 ~----Gi~v~~PeGGFfLwl~l~~~l~~~~~-~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~ 1063 (1082)
T PLN02672 989 C----GWDVLEPQGGISMVAKPSAYLGKTVK-LKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALE 1063 (1082)
T ss_pred C----CCeEecCCcEEEEEEEcccccccccc-ccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCC
Confidence 4 44333344577888765321000000 00000 11246788888876 999999743 4589999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 015230 394 SDDIQHTITAAEKVLR 409 (411)
Q Consensus 394 ~~~i~~~i~~l~~~~~ 409 (411)
++++++++++|++...
T Consensus 1064 ~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1064 DSEFDRALKAIARFKE 1079 (1082)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998654
No 174
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.95 E-value=2.6e-25 Score=215.23 Aligned_cols=334 Identities=13% Similarity=0.066 Sum_probs=205.0
Q ss_pred cHHHHHHHHHHHHcC---C-CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEE
Q 015230 54 DDQVLAALGETMKKG---T-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 123 (411)
Q Consensus 54 ~~~v~~a~~~~l~~~---~-~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~ 123 (411)
+..+.+++.+.++.. . .|+ +..++++.+++++.+..+ .+++|++|+|+++++..+++.. ...+++.|++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l-~~~~gD~Vlv 168 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLL-IGDPSDGVMI 168 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh-ccCCCCEEEE
Confidence 335777777666542 1 122 346788999999987654 5789999999999999999853 1135788999
Q ss_pred EeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEEE-EEEcccCCCCCcc
Q 015230 124 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAA-IILEPVVGNSGFI 199 (411)
Q Consensus 124 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~-vi~~~~~~~~G~~ 199 (411)
..++|++... .....|..+..++.....++.. |++++++.++.. ..++++ ++++| +|++|..
T Consensus 169 ~~P~y~~y~~-~~~~~g~~~v~v~~~~~~~~~~------------d~~~l~~~l~~~~~~~~~~k~l~l~~P-~NPTG~~ 234 (481)
T PTZ00377 169 PIPQYPLYSA-AITLLGGKQVPYYLDEEKGWSL------------DQEELEEAYEQAVRNGITPRALVVINP-GNPTGQV 234 (481)
T ss_pred CCCCchhHHH-HHHHcCCEEEEEEeccccCCCC------------CHHHHHHHHHHHHhcCCCeeEEEEECC-CCCCCcC
Confidence 9999986443 3344454444443322222211 789999888631 124655 55555 5556655
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc-cCc-cc-cc-cCC---------Ccchhhhhhhc-c-CCccccccc
Q 015230 200 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGG-AQ-EY-FGV---------TPDLTTLGKII-G-GGLPVGAYG 263 (411)
Q Consensus 200 ~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g-~~~-~~-~~-~~~---------~~d~~~~sK~~-~-~G~~~g~~~ 263 (411)
.+ .+.+++|.++|++|+++||+||+|..+ ..+ ..+ .. .. .+. ..-+.||||.+ + +|||+||++
T Consensus 235 ~s-~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~ 313 (481)
T PTZ00377 235 LT-RDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFE 313 (481)
T ss_pred CC-HHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEE
Confidence 44 455999999999999999999999877 322 111 11 00 011 11234899985 6 699999997
Q ss_pred c---cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc------------CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 264 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE------------PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 264 ~---~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+ ++++++.+.... ...++.+.+++.++.++++.... +++++.++++.+.+.+.|+++ .
T Consensus 314 ~~~~p~~li~~l~~~~----~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~---~ 386 (481)
T PTZ00377 314 LTNIPPEVREQIYKLA----SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKI---E 386 (481)
T ss_pred EeCCCHHHHHHHHHHh----heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 5 888888886422 12345677888888877742110 122223445555555555443 1
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------cceeeecCCCHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTSLAHSSDDIQHTI 401 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~~~~~~t~~~i~~~i 401 (411)
++.......|+++|+++.-+....-.........+...+.+.|.++||.+.|+.. +.+|+++..+++++++++
T Consensus 387 g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l 466 (481)
T PTZ00377 387 GVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMV 466 (481)
T ss_pred CcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHH
Confidence 2233334457888876631100000000000001122345666788999998741 258999888889999999
Q ss_pred HHHHHHHHh
Q 015230 402 TAAEKVLRQ 410 (411)
Q Consensus 402 ~~l~~~~~~ 410 (411)
++|.+++++
T Consensus 467 ~rl~~~~~~ 475 (481)
T PTZ00377 467 KKIKEFHES 475 (481)
T ss_pred HHHHHHHHH
Confidence 999998764
No 175
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.95 E-value=1.6e-25 Score=206.48 Aligned_cols=303 Identities=12% Similarity=0.099 Sum_probs=206.7
Q ss_pred cccCC-CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEe
Q 015230 48 AIIGH-ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 125 (411)
Q Consensus 48 ~~~g~-~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~ 125 (411)
+|+|+ .||+++++..++++.. ++..++++++.+.+++.++ .++++++++||++|+..++... ..+++.|++..
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~~---~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al--~~~gd~Vli~~ 102 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLETY---VGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILAL--EPPGRKVVHYL 102 (346)
T ss_pred ccccCCCChhHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHh--CCCCCEEEECC
Confidence 78999 8999999999999884 4677899999999999997 6799999999999999999742 23456666532
Q ss_pred --CCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCH
Q 015230 126 --GCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 203 (411)
Q Consensus 126 --~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~ 203 (411)
...|..+.....+.|..+ +.++++++++. . .++++|++++ .++.|.+.+ .
T Consensus 103 ~d~p~~~s~~~~~~l~ga~~---------------------~~~~~l~~l~~----~-~~~~lIiitg-~s~~G~v~~-~ 154 (346)
T TIGR03576 103 PEKPAHPSIPRSCKLAGAEY---------------------FESDELSELKK----I-DGTSLVVITG-STMDLKVVS-E 154 (346)
T ss_pred CCCCCchhHHHHHHHcCCEE---------------------eccCCHHHHhh----C-cCceEEEEEC-CCCCCcccC-H
Confidence 345555544444444321 11235555322 1 2456777766 466777754 2
Q ss_pred HHHHHHHHHHHHhCCEEEEecccccc--c-cccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCccc
Q 015230 204 DFLNAIRRITKENGALLIFDEVMTGF--R-LAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ 280 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li~De~~~g~--~-~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~ 280 (411)
+.+++|.++|++||++|++||+|..+ . .+.. ....++.+.-+.||||++ +|+|+||+++++++++.+......+
T Consensus 155 ~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~~- 231 (346)
T TIGR03576 155 EDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQF- 231 (346)
T ss_pred HHHHHHHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcCc-
Confidence 33999999999999999999999733 1 1221 111223223355899965 3679999999999999887543332
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccc
Q 015230 281 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 360 (411)
Q Consensus 281 ~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (411)
.++.++++++++.++|+.+..+..++.++++.+++.+.++++ ... ..+ ++|+++++...
T Consensus 232 --~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~----~~~--~~~-~~f~~~~~~~~------------ 290 (346)
T TIGR03576 232 --GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL----NVE--RTP-TGFVIKGVEEE------------ 290 (346)
T ss_pred --ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC----CCC--cCC-CeEEEEeCCCC------------
Confidence 223577788888888876443455666777777766666632 221 123 44777766321
Q ss_pred hHHHHHHHHHHHHcCeEeccCC-----CcceeeecCCCHH---HHHHHHHHHHHHH
Q 015230 361 TTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSD---DIQHTITAAEKVL 408 (411)
Q Consensus 361 ~~~~~~~~~~l~~~Gi~v~~~~-----~~~~~~~~~~t~~---~i~~~i~~l~~~~ 408 (411)
...+...+.|.++||.+.|+. .+++|++++..++ +++.++++|++.+
T Consensus 291 -~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 291 -KLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -CHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 112456677888899999963 3468998887765 7999999998765
No 176
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.9e-25 Score=207.69 Aligned_cols=321 Identities=13% Similarity=0.082 Sum_probs=208.9
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~ 112 (411)
+..++|+..+. ++++ .+|.+++++.+.+.......|++.-..++.+.+++.++ . .++|++|+|+++++..++++.
T Consensus 25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~ 101 (356)
T PRK04870 25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALAC 101 (356)
T ss_pred CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHh
Confidence 45789987773 3444 78889999999886532223333233566666666665 3 358999999999999888742
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
..+++.|++.+++|... .......|..+..++.....++ |++++++.+... +++++++...
T Consensus 102 --~~~gd~vlv~~P~y~~~-~~~~~~~g~~~~~i~~~~~~~~--------------d~~~l~~~~~~~--~~~~v~l~~p 162 (356)
T PRK04870 102 --AKPGATVLAPEPGFVMY-RMSAKLAGLEFVGVPLTADFTL--------------DLPAMLAAIAEH--RPALVFLAYP 162 (356)
T ss_pred --cCCCCEEEECCCCHHHH-HHHHHHcCCEEEEecCCCCCCC--------------CHHHHHHHhhcC--CCCEEEEcCC
Confidence 34567899999988753 3444455555554443211111 889999888642 4566655544
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
+|++|...+ .+.+++|.++| ++++|+||+|.+| ...........+...-+.|||| ++ +|+|+||+++++++++
T Consensus 163 ~NPtG~~~~-~~~~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~ 237 (356)
T PRK04870 163 NNPTGNLFD-DADVERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIA 237 (356)
T ss_pred CCCCCCCCC-HHHHHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHH
Confidence 666676665 33366666666 7899999999877 3211111111122223558999 77 6999999999999988
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+.... ..++.+.+++.++..+++.... ++.+++++++.+++.+.|+++ +........|+++|+.+.+
T Consensus 238 ~~~~~~-----~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~-- 306 (356)
T PRK04870 238 ELDKVR-----PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL----PGVTVFPSAANFILVRVPD-- 306 (356)
T ss_pred HHHHcc-----CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEECCCCCeEEEEECCC--
Confidence 886422 2345677777776666643221 444555666666666666553 2222234457788887631
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.++||.|.++. .+.+|+++. +.+++++++++|++++
T Consensus 307 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 307 --------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAAL 356 (356)
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHhC
Confidence 2578889999999998863 235788877 6788999999998753
No 177
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=5.5e-25 Score=211.34 Aligned_cols=307 Identities=14% Similarity=0.103 Sum_probs=192.7
Q ss_pred CCCHHHHHHHHHHHhhCC-----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC
Q 015230 73 APCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 147 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (411)
+..++++++++++.+..+ .+++|++|+|+++++..++... ..+++.|++.+|.|.+.........|..+..++
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l--~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCL--AEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIH 164 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHh--CCCCCEEEECCCCCCchHHHHhhcCCcEEEEEe
Confidence 446788999999987543 5789999999999999888742 345678888888887654433323454444433
Q ss_pred CCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 015230 148 LPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224 (411)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De 224 (411)
.....++.. |++++++.+++. ..+++++++...+|++|... +.+.+++|.++|++|+++||+||
T Consensus 165 ~~~~~~~~~------------~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~-s~e~l~~ll~~a~~~~~~iI~DE 231 (468)
T PLN02450 165 CSSSNGFQI------------TESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTT-TRTELNLLVDFITAKNIHLISDE 231 (468)
T ss_pred cCCccCCcC------------CHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEEc
Confidence 321222211 678888877641 23555544443344555544 45559999999999999999999
Q ss_pred ccccc-ccccCc--ccccc-----------CCCcchhhhhhhcc-CCcccccccccHH-HHHHhcCCCCcccccCCCCCH
Q 015230 225 VMTGF-RLAYGG--AQEYF-----------GVTPDLTTLGKIIG-GGLPVGAYGGRRD-IMEMVAPAGPMYQAGTLSGNP 288 (411)
Q Consensus 225 ~~~g~-~~g~~~--~~~~~-----------~~~~d~~~~sK~~~-~G~~~g~~~~~~~-~~~~~~~~~~~~~~~t~~~~~ 288 (411)
+|.++ ..+..+ ..... +...-+.||||.++ +|+|+||++++++ +++.+.... . ....+.
T Consensus 232 ~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~---~--~~~~s~ 306 (468)
T PLN02450 232 IYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS---S--FGLVSS 306 (468)
T ss_pred cccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHh---h--cCCCCH
Confidence 99876 433211 11111 11122559999998 8999999988644 555554211 1 123466
Q ss_pred HHHHHHHHHHHHHh---c--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHH
Q 015230 289 LAMTAGIHTLKRLK---E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 363 (411)
Q Consensus 289 ~~~a~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (411)
+++.++.++++.-. . ++.+++++++.+.+.+.|++. ++.......|+++|+++..... . .....
T Consensus 307 ~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~----gi~~~~~~~g~flwi~l~~~~~-~------~~~~~ 375 (468)
T PLN02450 307 QTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA----GIKCLKSNAGLFCWVDMRHLLK-S------NTFEA 375 (468)
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc----CCcccCCCceEEEEEEchHhcC-c------CCchH
Confidence 77777776664211 0 223444555555555555443 4433334568899998853210 0 11112
Q ss_pred HHHHHHHHH-HcCeEeccCC------CcceeeecC-CCHHHHHHHHHHHHHHHHh
Q 015230 364 FARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 364 ~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~-~t~~~i~~~i~~l~~~~~~ 410 (411)
..++.+.+. ++||.+.|+. .+.+|++++ .+++++++++++|++++.+
T Consensus 376 ~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~ 430 (468)
T PLN02450 376 EMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVES 430 (468)
T ss_pred HHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 234555554 5799999984 235899888 4899999999999998764
No 178
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=2.2e-25 Score=208.25 Aligned_cols=315 Identities=15% Similarity=0.077 Sum_probs=206.9
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC---CCCCHHHHHHHHHHHhhCC----CCCEEEEeCChHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACM 106 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~---~~~~~~~~~l~~~l~~~~~----~~~~v~~~~~g~~a~~ 106 (411)
+++.++|+.++ ++....++.+.+++.+..... .| .+..++++++++++.+.++ .+++|++|+|+++++.
T Consensus 19 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~ 94 (357)
T TIGR03539 19 HPDGIVDLSVG---TPVDPVPPLIRAALAAAADAP-GYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVA 94 (357)
T ss_pred CCCCeEEccCC---CCCCCCCHHHHHHHHHHHhhC-CCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHH
Confidence 45678999988 444335777888887665432 23 2456888999999988754 4689999999999998
Q ss_pred HHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 107 ~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++.++ ...+++.|++.+++|.+.... ....|..+.. + ++++.++ .+++++
T Consensus 95 ~~~~~l-~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~-------------------v--~~~~~l~------~~~~~~ 145 (357)
T TIGR03539 95 WLPTLL-GLGPGDTVVIPELAYPTYEVG-ALLAGATPVA-------------------A--DDPTELD------PVGPDL 145 (357)
T ss_pred HHHHHH-cCCCCCEEEECCCCcHHHHHH-HHhcCCEEec-------------------c--CChhhcC------ccCccE
Confidence 877642 235678899999999764333 2223331111 1 1333222 135677
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccccc------cCCCcchhhhhhhcc-CCc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEY------FGVTPDLTTLGKIIG-GGL 257 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~------~~~~~d~~~~sK~~~-~G~ 257 (411)
++++..+|++|...+. +.+++|.++|++||+++|+||+|.++ ..+.. ..++. .....-+.||||.++ +|+
T Consensus 146 v~~~~p~NPtG~~~~~-~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~ 224 (357)
T TIGR03539 146 IWLNSPGNPTGRVLSV-DELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGY 224 (357)
T ss_pred EEEeCCCCCcCccCCH-HHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCce
Confidence 7776666667766554 34999999999999999999999877 33321 11110 011122448999996 799
Q ss_pred ccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
|+||+++++++++.+.... ....+..+.+++.++.++++.... ++.++.++++.+++.+.|++. +.......
T Consensus 225 R~G~~i~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~----g~~~~~p~ 297 (357)
T TIGR03539 225 RAGFVAGDPALVAELLTVR---KHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA----GFRIDHSE 297 (357)
T ss_pred eEEEEecCHHHHHHHHHHH---hhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc----CCCCcCCC
Confidence 9999999999888775321 222455677788777777642111 334455555656666655543 33222334
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHH
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAA 404 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l 404 (411)
.|+++|+.+.. ....+.+.|.++||.+.|+. .+.+|+++..+++++++++++|
T Consensus 298 ~~~~~~~~~~~---------------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 298 AGLYLWATRGE---------------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred ccEEEEEECCC---------------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 56777886521 12568888999999999974 2458998888899999999876
No 179
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.8e-25 Score=207.83 Aligned_cols=321 Identities=15% Similarity=0.109 Sum_probs=207.0
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
++.++||..+. ++++ .+|.+++++.+.+.... ..|+..-..++.+.+++.++ .+++|++|+|+++++..+++..
T Consensus 23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~-~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l- 97 (353)
T PRK05387 23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDL-RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAF- 97 (353)
T ss_pred ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhh-hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh-
Confidence 35679999885 3433 57889999988776521 12232223566666666666 7889999999999999998853
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
..+++.|++.+++|.. +.......|..+..++.....++ |++++++ ....+++++| +
T Consensus 98 -~~~gd~vlv~~P~y~~-~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~------~~~~v~~~~P-~ 154 (353)
T PRK05387 98 -FNHDRPLLFPDITYSF-YPVYAGLYGIPYEEIPLDDDFSI--------------DVEDYLR------PNGGIIFPNP-N 154 (353)
T ss_pred -cCCCCEEEEeCCCHHH-HHHHHHHcCCEEEEeecCCCCCC--------------CHHHHHh------cCCEEEEeCC-C
Confidence 3466788888888854 34444445554444333211111 7777652 1233455555 5
Q ss_pred CCCCccCCCHHHHHHHHHHHHHh-CCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~-~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
|++|.+.+ .+++.++++++ ++++|+||+|..| ........+..+...-+.||||.++ +|+|+||+++++++++
T Consensus 155 NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~ 230 (353)
T PRK05387 155 APTGIALP----LAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIE 230 (353)
T ss_pred CCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHH
Confidence 56677766 55556666554 9999999999866 2111111111222223458999999 8999999999999988
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+...... ..+++.+.+++.++.++++..+. ++.+++++++.+++.+.|++. ++.. ....|.++|+.+.+
T Consensus 231 ~l~~~~~~--~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~-~~~~~~~~~~~~~~-- 301 (353)
T PRK05387 231 ALNRVKNS--FNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL----GFEV-LPSKANFVFARHPS-- 301 (353)
T ss_pred HHHHhhcc--CCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----CCeE-CCCcCcEEEEECCC--
Confidence 87643211 13556778888887777642111 445566666667777776654 3322 23446777776532
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.+..++.+.|.++||.+.+.+ .+.+|+++. +.+++++++++|++++.
T Consensus 302 ------------~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 ------------HDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred ------------CCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 113678899999999996653 235888876 67999999999998875
No 180
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.94 E-value=1.4e-25 Score=207.17 Aligned_cols=305 Identities=15% Similarity=0.060 Sum_probs=197.9
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
..++|+.+|. ++++...+.+.+ ..+... +... ..|.+.+++.+ +.++|++|+|+++++..++. .
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~y-----p~~~-~~Lr~~ia~~~-~~~~I~it~Gs~~al~~~~~----~ 83 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWARL-----PETD-DGLEAAARAYY-GAPQLLPVAGSQAAIQALPR----L 83 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHhC-----CCCh-HHHHHHHHHHh-CCCCEEECcCHHHHHHHHHH----c
Confidence 3579999987 677765333322 223331 2111 45555555555 56899999999999988753 3
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCC
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 195 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~ 195 (411)
.+++.|++.+|+|+..... ....|. ++..++ .+++++.++ ....+++++|+| +
T Consensus 84 ~~gd~v~v~~P~y~~~~~~-~~~~g~-------------------~~~~v~---~~~~~~~~~---~~~~v~l~nP~N-P 136 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHAHA-WRRAGH-------------------QVRELD---EAEVEAALD---SLDVLVVVNPNN-P 136 (330)
T ss_pred cCCCEEEEcCCChHHHHHH-HHHcCC-------------------eEEEec---hhhHhhhhc---CCCEEEEeCCcC-C
Confidence 4678899999999864332 223333 223332 344555554 223567777864 5
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHHHhc
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 273 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~ 273 (411)
+|.+.+ .+.+++|.++|++++++||+||+|.++ ...........+...-+.||||.++ +|+|+||+++++++++.+.
T Consensus 137 TG~~~s-~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~ 215 (330)
T PRK05664 137 TGRRFD-PARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALA 215 (330)
T ss_pred CCCccC-HHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccccCCCcceEEEEeCHHHHHHHH
Confidence 555554 344999999999999999999999876 3222222211111223559999999 8999999999999988886
Q ss_pred CCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCC
Q 015230 274 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 352 (411)
Q Consensus 274 ~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 352 (411)
... .++..+.+++.++.++++.... ++.++.++++.+++.+.|++. +.. ...+.++++|+.+.
T Consensus 216 ~~~-----~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~-~~~~~~~f~~~~~~------ 279 (330)
T PRK05664 216 ELL-----GPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH----GLT-PAGGCALFQWVRTE------ 279 (330)
T ss_pred Hhc-----CCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC----CCc-ccCCcceEEEEecC------
Confidence 421 2445677777887777753221 445566666666676666654 321 11222356666541
Q ss_pred cchhcccchHHHHHHHHHHHHcCeEeccCC-CcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 353 FEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+..++.+.|.++||.|...+ .+.+|+++..+.++++++++.|+++.++
T Consensus 280 ----------~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 ----------DAAALHEFLARRGILTRLFEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred ----------CHHHHHHHHHHCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 12678899999999998753 3468998877788899999999887654
No 181
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.94 E-value=8.7e-26 Score=214.01 Aligned_cols=332 Identities=14% Similarity=0.086 Sum_probs=211.2
Q ss_pred EEEeccCCccccccCCCc--HHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCC---CCCEE--EEeCChHHH
Q 015230 37 EYIDYVGSWGPAIIGHAD--DQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVP---SIEMV--RFVNSGTEA 104 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~--~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~---~~~~v--~~~~~g~~a 104 (411)
.++||..+....+.+..+ +.+.+++.+.++... .| .+..++++.+++++.+... .++++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 568988885333333333 678888877765421 23 3457888999999876543 46776 999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC--CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
+..++++.....+++.|++.+++|++. .......|..+..++. ++..++ |++.+++.++..+.
T Consensus 107 l~~~~~~l~~~~pGd~Vlv~~P~y~~~-~~~~~~~g~~~v~v~~~~~~~~~~--------------d~~~l~~~~~~~~~ 171 (396)
T PRK09257 107 LRVGADFLKRAFPDAKVWVSDPTWPNH-RAIFEAAGLEVKTYPYYDAATKGL--------------DFDAMLADLSQAPA 171 (396)
T ss_pred HHHHHHHHHHhCCCCeEEECCCCcccH-HHHHHHcCCcEEEEeccccccCcc--------------CHHHHHHHHHhCCC
Confidence 999987543345778999999999865 4444455555555443 111222 89999988875433
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc-cc-Ccc---cccc-CCCcchhhhhhhcc-
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AY-GGA---QEYF-GVTPDLTTLGKIIG- 254 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~-g~-~~~---~~~~-~~~~d~~~~sK~~~- 254 (411)
+..++++...+|++|... +.+.+++|.++|++|++++|+||+|.++ .. +. ... +... .....+.||||.++
T Consensus 172 ~~~~~i~~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~ 250 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADL-TPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGL 250 (396)
T ss_pred CCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcc
Confidence 345555455555566554 4555999999999999999999999877 32 11 111 1111 12233568999999
Q ss_pred CCcccccccc---cHHH----HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH------hc--CChHHHHHHHHHHHHH
Q 015230 255 GGLPVGAYGG---RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQ 319 (411)
Q Consensus 255 ~G~~~g~~~~---~~~~----~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~------~~--~~~~~~~~~~~~~~~~ 319 (411)
+|+|+||+++ +++. +..+.. .......+.+++++.++.+.++.- .+ +++++.++++.+.+.+
T Consensus 251 ~GlRiG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 251 YGERVGALSVVAEDAEEADRVLSQLKA---TIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred ccccceeEEEEeCCHHHHHHHHHHHHH---HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999962 4443 333321 111123334667766666665321 11 3455666666666666
Q ss_pred HHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecC-CCHHHHH
Q 015230 320 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQ 398 (411)
Q Consensus 320 ~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~-~t~~~i~ 398 (411)
.|++..............|+++|+.+.. +.+.+.+.++||.+.|.+ |++++ .++++++
T Consensus 328 ~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------------~~~~~l~~~~~V~~~p~~----ri~~~~~~~~~i~ 386 (396)
T PRK09257 328 ALKAKGPSRDFDFIARQRGMFSYSGLTP-----------------EQVDRLREEFGVYAVGSG----RINVAGLNESNID 386 (396)
T ss_pred HHHhcCCCCCcccccccceEEEecCCCH-----------------HHHHHHHHcCCEEEcCCC----eEEEeeCCHHHHH
Confidence 6666521001222334568888887621 345555677799998853 88765 7999999
Q ss_pred HHHHHHHHHH
Q 015230 399 HTITAAEKVL 408 (411)
Q Consensus 399 ~~i~~l~~~~ 408 (411)
+++++|.+++
T Consensus 387 ~~~~~i~~~~ 396 (396)
T PRK09257 387 YVAEAIAAVL 396 (396)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 182
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=2.5e-25 Score=205.76 Aligned_cols=304 Identities=16% Similarity=0.060 Sum_probs=200.5
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~ 113 (411)
..++||.+|. +++|...+.+.. ..+.. |++.. .+|.+.+++.++ . +++|++|+|+++++..+..
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~-----Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~--- 89 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR-----LPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA--- 89 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHHh-----CCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH---
Confidence 5689999998 888865333211 22222 45444 888999999887 3 5899999999999986543
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
.+ +++++++.+++|......+ ...|..+. .++.++ +.+.+ .-..+++++|+|
T Consensus 90 ~~-~~g~v~v~~P~y~~y~~~~-~~~g~~~~-------------------~v~~~~-~~~~~------~~~~v~l~nPnN 141 (339)
T PRK06959 90 LL-PRGRVGIAPLAYSEYAPAF-ARHGHRVV-------------------PLDEAA-DTLPA------ALTHLIVVNPNN 141 (339)
T ss_pred hc-CCCeEEEcCCCcHHHHHHH-HHCCCEEE-------------------eecccc-hhccc------cCCEEEEeCCCC
Confidence 23 3356888888888543333 33333222 222211 11111 113577788854
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~ 271 (411)
++|.+.+ .+.+++|.+.|.++++++|+||+|.+| ...............-+.||||.++ +|+|+||+++++++++.
T Consensus 142 -PTG~~~s-~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~~li~~ 219 (339)
T PRK06959 142 -PTAERLP-AARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAA 219 (339)
T ss_pred -CCCCCCC-HHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhcCCcchheEEEecCHHHHHH
Confidence 4555544 444888888899999999999999987 3222111111111122459999999 89999999999999998
Q ss_pred hcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC
Q 015230 272 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 350 (411)
Q Consensus 272 ~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 350 (411)
+.... ..++.+.+++.++.++++.... ++.++.++++.+++.+.|+++ ++.. ...++++|+++.+
T Consensus 220 l~~~~-----~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~--~~~~~f~~~~~~~--- 285 (339)
T PRK06959 220 LRDAL-----GAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH----GFAV--HATPLFSWTDDPR--- 285 (339)
T ss_pred HHHhc-----CCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCCc--cCcceEEEEeCCC---
Confidence 87432 2455677888888888753211 445566666777777777665 3221 1346777876521
Q ss_pred CCcchhcccchHHHHHHHHHHHHcCeEeccCC-CcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 351 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..++.+.|.++||+|+..+ .+.+|++...+.++++++++.|+++++.
T Consensus 286 -------------~~~l~~~l~~~GI~vr~~~~~~~lRisi~~~~~e~~~l~~al~~~~~~ 333 (339)
T PRK06959 286 -------------AAALHAALARRGIWTRYFAPPPSVRFGLPADEAEWQRLEDALAECVPT 333 (339)
T ss_pred -------------HHHHHHHHHhCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHHH
Confidence 2578999999999998753 3468999877889999999999988764
No 183
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=3.4e-25 Score=204.85 Aligned_cols=302 Identities=16% Similarity=0.120 Sum_probs=192.3
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
.++||.+|. ++++ + .... ..|++....+|.+.+++.++ .+++|++|+|+++++..++++ .
T Consensus 17 ~~i~l~~Ne--np~~--~----------~~~~--~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~---~ 77 (332)
T PRK06425 17 RIIDFSANI--NDFM--D----------IGDI--SIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY---I 77 (332)
T ss_pred CEEEecccc--CCCc--C----------hhhc--ccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH---h
Confidence 578998886 5553 0 1111 23566667888888988888 788999999999999998863 2
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCC
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 195 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~ 195 (411)
+++++++.+|+|... .......|..+..++... .+ .|.+.++ +. ++++++++..+|+
T Consensus 78 -~~~~vv~~~P~y~~y-~~~~~~~G~~v~~vp~~~-~~--------------~~~~~l~----~~--~~k~v~l~nP~NP 134 (332)
T PRK06425 78 -NVGNIIIVEPNFNEY-KGYAFTHGIRISALPFNL-IN--------------NNPEILN----NY--NFDLIFIVSPDNP 134 (332)
T ss_pred -CCCcEEEeCCChHHH-HHHHHHcCCeEEEEeCCc-cc--------------CcHHHHh----hc--CCCEEEEeCCCCC
Confidence 335677888888854 344444455444433211 00 0333332 21 3444444344445
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccc---cCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY---FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~---~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
+|...+ .+.+++|.++|++|+++||+||+|.+| ..+....... .+...-+.||||.++ +|+|+||+++++++++
T Consensus 135 TG~~~s-~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~ 213 (332)
T PRK06425 135 LGNLIS-RDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMK 213 (332)
T ss_pred cCCccC-HHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHH
Confidence 565544 444999999999999999999999988 3331111111 122233559999999 9999999999999998
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+.... .++..+.+++++.. ..+.-. .++.++.++++.+++.+.|+++ +........|+++|+.+.
T Consensus 214 ~l~~~~-----~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~~~~~~g~f~~~~~~--- 280 (332)
T PRK06425 214 ISRKIT-----EPWSVCDPAIDFIR-SIDLDYVAKHSLDIMENERSYLINNLEAM----GFRAAGDPSANFITFMIP--- 280 (332)
T ss_pred HHHHcC-----CCCccCHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHC----CCEECCCCCceEEEEEcC---
Confidence 887422 23344444433322 111100 0344566666666666666654 332222345788888763
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCCC------cceeeecCCCHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
+..++.+.|.++||.+.++.. +.+|+++. +.++.++++++|++++
T Consensus 281 -------------~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 281 -------------DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred -------------CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 126788999999999998742 35788866 6789999999999875
No 184
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=5.2e-25 Score=205.74 Aligned_cols=319 Identities=17% Similarity=0.172 Sum_probs=208.7
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
.++|+..+. +++| .++.+++++.+.+.....| +..-..++.+.+++.++ .+++|++++|+++++..++... .
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y--~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~--~ 95 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNRY--PDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT--A 95 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCcC--CCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh--c
Confidence 478888874 3343 5678999998887653333 33344566666666665 6779999999999888877642 3
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCC
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 195 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~ 195 (411)
.+++.|++..++|.. +.......|..+..++.....+. |++.+++.++. ++++++++.++|+
T Consensus 96 ~~gd~Vli~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~~---~~~~v~l~~p~NP 157 (352)
T PRK03321 96 GPGDEVIFAWRSFEA-YPILVQVAGATPVQVPLTPDHTH--------------DLDAMAAAITD---RTRLIFVCNPNNP 157 (352)
T ss_pred CCCCEEEeCCCCHHH-HHHHHHHcCCEEEEccCCCCCCC--------------CHHHHHHhhcc---CCCEEEEeCCCCC
Confidence 456778887777753 22233334444333332211111 78888888763 4556666556667
Q ss_pred CCccCCCHHHHHHHHHHHHH--hCCEEEEecccccc-ccccC-ccccccCCCcc---hhhhhhhcc-CCcccccccccHH
Q 015230 196 SGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYG-GAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRD 267 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~--~~~~li~De~~~g~-~~g~~-~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~~~~ 267 (411)
+|.+.+ .++|.++|++ +++++|+||+|.+| ..+.. .........++ +.||||.|+ +|+|+||++++++
T Consensus 158 tG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 233 (352)
T PRK03321 158 TGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE 233 (352)
T ss_pred cCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHH
Confidence 788877 6677777776 69999999999877 43321 11111111223 348999998 7999999999999
Q ss_pred HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 268 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
+++.+... ...++.+.+++.++.++++.... .+..++..+....+.+.|++ .++.. ....|+++|+.+.
T Consensus 234 ~~~~~~~~-----~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~~-~~~~g~~i~i~l~ 303 (352)
T PRK03321 234 VIAALRKV-----AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRA----AGWTV-PPSQANFVWLPLG 303 (352)
T ss_pred HHHHHHHh-----cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCcc-CCCCCCEEEEeCC
Confidence 99988742 23567788888888777752221 22222333333444444443 23322 2345888888773
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
. ...++.+.|.++||.+.+.+.+.+|+.+ .+.+++++++++|++++..
T Consensus 304 ~---------------~~~~~~~~l~~~gI~v~~~~~~~iRi~~-~~~~~~~~~~~al~~~~~~ 351 (352)
T PRK03321 304 E---------------RTADFAAAAAEAGVVVRPFAGEGVRVTI-GAPEENDAFLRAARAWRAG 351 (352)
T ss_pred C---------------CHHHHHHHHHHCCEEEEccCCCcEEEee-CCHHHHHHHHHHHHHHhcc
Confidence 1 1257888999999999987656689886 4889999999999988754
No 185
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.4e-25 Score=211.26 Aligned_cols=334 Identities=13% Similarity=0.095 Sum_probs=208.5
Q ss_pred CEEEeccCCccccccCC-CcHHHHHHHHHHH----HcC--CCC---CCCCHHHHHHHHHHHhhCC---CCCEEE--EeCC
Q 015230 36 NEYIDYVGSWGPAIIGH-ADDQVLAALGETM----KKG--TSF---GAPCLLENVLAEMVISAVP---SIEMVR--FVNS 100 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l----~~~--~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~--~~~~ 100 (411)
...+|+..+ .+... .++...+++.+++ ... ..| .+..++++++++++....+ .+++|+ .|+|
T Consensus 29 ~~~i~l~~g---~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G 105 (404)
T PTZ00376 29 PSKVNLGIG---AYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS 105 (404)
T ss_pred cccEecccc---eeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence 466898888 32112 2223334444443 211 223 2447888999998866542 567888 4889
Q ss_pred hHHHHHHHHHHHHhc-cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC--CCCCCCCCCCceeecCCCCHHHHHHHH
Q 015230 101 GTEACMGVLRLARAF-TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLF 177 (411)
Q Consensus 101 g~~a~~~al~~~~~~-~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~l~~~~ 177 (411)
+++|+..++.+.+.+ .+++.|++.+|+|++. .......|..+..++... ..++ |++.+++.+
T Consensus 106 ~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~-~~~~~~~G~~~~~v~l~~~~~~~~--------------d~~~l~~~~ 170 (404)
T PTZ00376 106 GTGALRLGFEFLKRFLPAGTTVYVSNPTWPNH-VNIFKSAGLNVKEYRYYDPKTKGL--------------DFDGMLEDL 170 (404)
T ss_pred cchHHHHHHHHHHHhcCCCCEEEEcCCCchhH-HHHHHHcCCceeeccccCcccCCc--------------CHHHHHHHH
Confidence 999999988654333 5678899999999865 445556666555544311 1222 889999988
Q ss_pred HcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc---C---cccccc-CCCcchhhh
Q 015230 178 ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY---G---GAQEYF-GVTPDLTTL 249 (411)
Q Consensus 178 ~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~---~---~~~~~~-~~~~d~~~~ 249 (411)
++...+.++++++..+|++|.... ++.+++|.++|++|+++||+||+|.+| ..+. . ...... .....+.||
T Consensus 171 ~~~~~~~~~~~~~~p~NPTG~~~s-~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~Sf 249 (404)
T PTZ00376 171 RTAPNGSVVLLHACAHNPTGVDPT-EEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSF 249 (404)
T ss_pred HhCCCCCEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeC
Confidence 754333455555555555665554 455999999999999999999999887 4221 0 111111 112335589
Q ss_pred hhhcc-CCcccccc---cccHHHHHHhcCCCCcccccCC-CCCHHHHHHHHHHHHHHh-------c-CChHHHHHHHHHH
Q 015230 250 GKIIG-GGLPVGAY---GGRRDIMEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLK-------E-PGTYEYLNKITGE 316 (411)
Q Consensus 250 sK~~~-~G~~~g~~---~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~a~~~~~l~~~~-------~-~~~~~~~~~~~~~ 316 (411)
||.++ +|+|+||+ ++++++++.+..........++ +.+.+++.++.++++.-. . ++.+++++++.+.
T Consensus 250 SK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 250 SKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred CCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999 89999998 5677655543210000011122 345677777777664211 1 2334556677777
Q ss_pred HHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCCcceeeecC-CCH
Q 015230 317 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEAGFTSLA-HSS 394 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~~~~~~~-~t~ 394 (411)
+.+.|++......+.......|+++|+.+. .++++.|.++ ||.+.|++ |++++ .+.
T Consensus 330 l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~------------------~~~~~~L~~~~~v~v~p~~----Ris~~~~~~ 387 (404)
T PTZ00376 330 LYDELKALGSPGDWEHIINQIGMFSFTGLT------------------KEQVERLIEKYHIYLLDNG----RISVAGLTS 387 (404)
T ss_pred HHHHHHhcCCCCcccccccCceEEEecCCC------------------HHHHHHHHHhCCEeecCCC----eEEEeccCH
Confidence 777776652110111122445778888662 3567777766 99999984 88775 899
Q ss_pred HHHHHHHHHHHHHHHh
Q 015230 395 DDIQHTITAAEKVLRQ 410 (411)
Q Consensus 395 ~~i~~~i~~l~~~~~~ 410 (411)
+++++++++|++++..
T Consensus 388 ~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 388 KNVDYVAEAIHDVVRN 403 (404)
T ss_pred HhHHHHHHHHHHHHhc
Confidence 9999999999998764
No 186
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.2e-24 Score=203.02 Aligned_cols=329 Identities=14% Similarity=0.123 Sum_probs=216.2
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcC----CCC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 104 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~----~~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a 104 (411)
+..++||..+ ++.-..++.+.+++.+.++.. ..| .+..++++.+++++.+.++ .++++++|+|++++
T Consensus 32 ~~~~~~l~~g---~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a 108 (394)
T PRK06836 32 ADNVFDFSLG---NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA 108 (394)
T ss_pred CCCeEEecCc---CCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence 3467898777 332225678888888776642 112 2346677888888877653 57899999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC-CCCCCCCCCceeecCCCCHHHHHHHHHcCCCc
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGE 183 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 183 (411)
+..+++.. ..+++.|++.+++|... .......|..+..++.... .++ |++++++.++. +
T Consensus 109 l~~~~~~l--~~~gd~Vli~~p~~~~~-~~~~~~~g~~v~~v~~~~~~~~~--------------d~~~l~~~~~~---~ 168 (394)
T PRK06836 109 LNVALKAI--LNPGDEVIVFAPYFVEY-RFYVDNHGGKLVVVPTDTDTFQP--------------DLDALEAAITP---K 168 (394)
T ss_pred HHHHHHHh--cCCCCEEEEcCCCCccH-HHHHHHcCCEEEEEecCCccCcC--------------CHHHHHhhcCc---C
Confidence 99988743 34567888888888764 3333444555555443211 122 88999988863 4
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHH------hCCEEEEecccccc-ccccC--ccccccCCCcchhhhhhhcc
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLTTLGKIIG 254 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~------~~~~li~De~~~g~-~~g~~--~~~~~~~~~~d~~~~sK~~~ 254 (411)
+++++++..+|++|...+.++ +++|.++|++ |++++|+||+|.++ ..+.. .....++...-+.||||.++
T Consensus 169 ~~~v~~~~p~NPtG~~~~~~~-~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 247 (394)
T PRK06836 169 TKAVIINSPNNPTGVVYSEET-LKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLS 247 (394)
T ss_pred ceEEEEeCCCCCCCcCCCHHH-HHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhcc
Confidence 666666666666777665444 9999999999 89999999999887 43321 11112222233558999999
Q ss_pred -CCcccccccccHHHHHH------hcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh
Q 015230 255 -GGLPVGAYGGRRDIMEM------VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 255 -~G~~~g~~~~~~~~~~~------~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
+|+|+||+++++++.+. +..... .......+.+.+.++...++ +...++.++++.+.+.+.|++.
T Consensus 248 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~~--- 319 (394)
T PRK06836 248 LPGERIGYIAVNPEMEDADDLVAALVFANR--ILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTEL--- 319 (394)
T ss_pred CcceeeEEEecCHHHhhhHHHHHHHHHHhh--ccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHhC---
Confidence 89999999888765321 110000 01123455666666655543 2223445666666666666553
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITA 403 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~ 403 (411)
++.......|+++|+.+... +..++.+.|.++||.+.++. .+.+|++++.+++++++++++
T Consensus 320 -g~~~~~~~gg~~~~~~~~~~--------------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~ 384 (394)
T PRK06836 320 -GFECVKPQGAFYLFPKSPEE--------------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPA 384 (394)
T ss_pred -CCEeecCCceEEEEEeCCCC--------------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHH
Confidence 43333344577888866321 12567788899999999984 245899888899999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|++++++
T Consensus 385 l~~~l~~ 391 (394)
T PRK06836 385 FEKLAKE 391 (394)
T ss_pred HHHHHHH
Confidence 9998864
No 187
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=2e-24 Score=208.03 Aligned_cols=307 Identities=13% Similarity=0.067 Sum_probs=191.5
Q ss_pred CCCHHHHHHHHHHHhhCC-----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC
Q 015230 73 APCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 147 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (411)
+..++++++++++.+..+ .+++|++|+|+++|++.++... ..+++.|++.+|.|.+.........|..+..++
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l--~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCL--ADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHh--CCCCCEEEECCCCccchHHHHHhhCCCEEEEEe
Confidence 347889999999987643 5789999999999999988742 345678888888888754333223455444444
Q ss_pred CCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 015230 148 LPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224 (411)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De 224 (411)
.....++.. |++.+++.+++ ...+++++++...+|++|.+.+ .+.+++|.++|++|+++||+||
T Consensus 173 ~~~~~~~~~------------~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s-~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 173 CSSSDNFKL------------TVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLD-KDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred CCCCccCcC------------CHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCC-HHHHHHHHHHHHHcCCEEEEEc
Confidence 321111111 77888766432 1235665554444555665544 4559999999999999999999
Q ss_pred ccccc-ccccCc-c-cccc---C---CCcc----hhhhhhhcc-CCcccccccc-cHHHHHHhcCCCCcccccCCCCCHH
Q 015230 225 VMTGF-RLAYGG-A-QEYF---G---VTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPL 289 (411)
Q Consensus 225 ~~~g~-~~g~~~-~-~~~~---~---~~~d----~~~~sK~~~-~G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~ 289 (411)
+|.++ ..+..+ . .... + ..++ +.||||.|+ +|+|+||+++ ++.+.+.+.... .....+.+
T Consensus 240 iY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~-----~~~~vs~~ 314 (496)
T PLN02376 240 IYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMS-----SFGLVSSQ 314 (496)
T ss_pred CccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHh-----hcCCCCHH
Confidence 99876 433211 1 1110 1 1223 348999998 8999999987 455655543211 12234566
Q ss_pred HHHHHHHHHHHHhc-C----ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHH
Q 015230 290 AMTAGIHTLKRLKE-P----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 364 (411)
Q Consensus 290 ~~a~~~~~l~~~~~-~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (411)
++.++.+.++.-.- + +.+++++++.+.+.+.|++ .++.......|+++|+++....... ...+..
T Consensus 315 ~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi~~~~~~aG~flwi~l~~~~~~~------~~~~~e 384 (496)
T PLN02376 315 TQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADIACLTSNAGLFAWMDLRHLLRDR------NSFESE 384 (496)
T ss_pred HHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCceEEEEEEchhhhccC------CchhHH
Confidence 77766666532110 1 2233344444444444443 3443333456899999985321000 011123
Q ss_pred HHHHHHHHHc-CeEeccCCC------cceeeecC-CCHHHHHHHHHHHHHHHH
Q 015230 365 ARFYRGMLEE-GVYFAPSQF------EAGFTSLA-HSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 365 ~~~~~~l~~~-Gi~v~~~~~------~~~~~~~~-~t~~~i~~~i~~l~~~~~ 409 (411)
.++.+.+.++ ||.+.|+.. +.+|+++. .+++++++++++|.+++.
T Consensus 385 ~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 385 IELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 5677777765 999999742 35899887 588999999999999875
No 188
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=1.2e-24 Score=207.91 Aligned_cols=340 Identities=13% Similarity=0.109 Sum_probs=207.3
Q ss_pred CEEEeccCCccccccCCCc--HHHHHHHHHHHHcC------CCCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCh
Q 015230 36 NEYIDYVGSWGPAIIGHAD--DQVLAALGETMKKG------TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSG 101 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~--~~v~~a~~~~l~~~------~~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g 101 (411)
..++||..+ ++.-... +.+.+++.+.+... ..|+ +..++++.+++++.+.++ .+++|++|+|+
T Consensus 30 ~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga 106 (416)
T PRK09440 30 PGAIMLGGG---NPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGS 106 (416)
T ss_pred CCceeccCC---CCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCh
Confidence 346888877 4432222 35666666665431 1232 346788999999987654 67899999999
Q ss_pred HHHHHHHHHHHHhc---cCCcEEEE-EeCCcCCCchhhhhhc---CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 102 TEACMGVLRLARAF---TGRERIIK-FEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 102 ~~a~~~al~~~~~~---~~~~~vi~-~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
++++..++++.... ..++.|++ .+++|++....+.... +.+....+.+. ..+ .+. -|++.++
T Consensus 107 ~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~---~d~~~l~ 175 (416)
T PRK09440 107 QSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPE-GQF-------KYH---VDFEHLH 175 (416)
T ss_pred HHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccc-ccc-------ccC---CCHHHcc
Confidence 99999988753211 12467888 6999987544222111 11111111110 000 000 1677776
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCc-cc-c-ccCCCcchhhhhh
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG-AQ-E-YFGVTPDLTTLGK 251 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~-~~-~-~~~~~~d~~~~sK 251 (411)
+. .+++++++...+|++|.+.+ .+.+++|.++|++|+++||+||+|..+.....+ .. . ..+....+.||||
T Consensus 176 --~~---~~~~~i~l~~P~NPTG~~~s-~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK 249 (416)
T PRK09440 176 --ID---EDTGAICVSRPTNPTGNVLT-DEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSK 249 (416)
T ss_pred --cC---CCceEEEEecCCCCCCccCC-HHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEecccc
Confidence 22 24455544444556666654 455999999999999999999999743111100 00 0 0122233569999
Q ss_pred hccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-----CChHHHHHHHHHHHHHHHHHHHH
Q 015230 252 IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAGK 326 (411)
Q Consensus 252 ~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~ 326 (411)
...+|+|+||+++++++++.+.... .....+.+.+++.++.++++.-.. +.++..++++.+.+++.|++...
T Consensus 250 ~~~pGlRiG~~i~~~~l~~~~~~~~---~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~ 326 (416)
T PRK09440 250 LGLPGVRCGIVIADEEIIEALSNMN---GIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLP 326 (416)
T ss_pred cCCCcceEEEEeCCHHHHHHHHHHH---HHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7447999999999999988876422 222345677888887777642111 11334455555666666655432
Q ss_pred hcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------------cceeeecCCC
Q 015230 327 KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------EAGFTSLAHS 393 (411)
Q Consensus 327 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------------~~~~~~~~~t 393 (411)
..++.......|+++|+++.... ....++.+.|.++||.+.|+.. +.+|++++.+
T Consensus 327 ~~~~~~~~p~gg~fiw~~~~~~~------------~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~ 394 (416)
T PRK09440 327 DEPCLIHKPEGAIFLWLWFKDLP------------ITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQD 394 (416)
T ss_pred cCCeEEecCCCceEEEEECCCCC------------CCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecCC
Confidence 22222223345889999884311 1125678888899999998631 2589988778
Q ss_pred HHHHHHHHHHHHHHHHh
Q 015230 394 SDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 394 ~~~i~~~i~~l~~~~~~ 410 (411)
++++++++++|.+++++
T Consensus 395 ~~~l~~~i~~l~~~~~~ 411 (416)
T PRK09440 395 DEEIEKGIAILAEEVEK 411 (416)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 189
>PRK09105 putative aminotransferase; Provisional
Probab=99.94 E-value=8.4e-25 Score=204.73 Aligned_cols=318 Identities=17% Similarity=0.144 Sum_probs=203.7
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
+.++++..|. ++++ .+|.+++++.+.+.....| +.....++.+.+++.++ .+++|++|+|+++++..++...
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l-- 115 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY--DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF-- 115 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC--CCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH--
Confidence 4467777763 3444 6888999998887653333 33336677778888777 7899999999999999998743
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
..+++.|++.+++|..... .....|.++..++....... |++++++.. ++...+++++| +|
T Consensus 116 ~~~gd~Vli~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~---~~~~~v~l~nP-~N 176 (370)
T PRK09105 116 TSPTAGLVTADPTYEAGWR-AADAQGAPVAKVPLRADGAH--------------DVKAMLAAD---PNAGLIYICNP-NN 176 (370)
T ss_pred cCCCCEEEEeCCChHHHHH-HHHHcCCeEEEecCCCCCCC--------------CHHHHHhcC---CCCCEEEEeCC-CC
Confidence 3456789999988876533 34444554444333211111 777776542 22333444555 55
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcc---hhhhhhhcc-CCcccccccccHHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD---LTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d---~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
++|.+.+ .+.+++|.+.|+ +++++|+||+|..|..+. ...+..+..++ +.||||.++ +|+|+||+++++++++
T Consensus 177 PTG~~~~-~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~ 253 (370)
T PRK09105 177 PTGTVTP-RADIEWLLANKP-AGSVLLVDEAYIHFSDAP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLA 253 (370)
T ss_pred CCCcCcC-HHHHHHHHHhCC-CCcEEEEECchHHhccCc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHH
Confidence 6666654 444777777653 589999999998661111 11111111223 458999998 7999999999999998
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+... ..+..+.+++.++.++++.... ++.+++++++.+++.+.|++. ++.. ..+.|.++++++..
T Consensus 254 ~l~~~------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~-~~~~~~f~~~~~~~-- 320 (370)
T PRK09105 254 KLARF------GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK----GYKC-TPSQANCFMVDVKR-- 320 (370)
T ss_pred HHHhc------CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCc-CCCCCcEEEEeCCC--
Confidence 88742 2344666777777766642111 344455666666666666653 3221 23446666665521
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccC---CCcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
+..++.+.|.++||.+... ..+.+|+++. ++++++++++.|+++++
T Consensus 321 -------------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~~ 369 (370)
T PRK09105 321 -------------PAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVMR 369 (370)
T ss_pred -------------CHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 1267899999999999422 1346888866 67889999999988763
No 190
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.3e-24 Score=200.78 Aligned_cols=321 Identities=11% Similarity=0.099 Sum_probs=202.4
Q ss_pred EeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-C-CC--CCCHHHHHHHHHHHhhCCCCCEEEEe
Q 015230 23 DSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-S-FG--APCLLENVLAEMVISAVPSIEMVRFV 98 (411)
Q Consensus 23 ~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~-~~--~~~~~~~~l~~~l~~~~~~~~~v~~~ 98 (411)
.+++|.+.+...|+.++|+..|. ++++ .+|.+++++.+++.... . |. +..++++.+++++.+..-.+++|++|
T Consensus 6 ~~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it 82 (335)
T PRK14808 6 LIAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVG 82 (335)
T ss_pred hhhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEc
Confidence 45667777767888999998884 4444 77889999988775422 1 21 22444555555554332258899999
Q ss_pred CChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHH
Q 015230 99 NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 178 (411)
Q Consensus 99 ~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 178 (411)
+|+++++..+++. + +.|++.+++|.... ......|..+..++... ... . +.. .++
T Consensus 83 ~Ga~~~i~~~~~~---~---d~v~v~~P~y~~~~-~~~~~~g~~~~~v~~~~--~~~---------~---~~~----~~~ 137 (335)
T PRK14808 83 NGADEIIYVMMLM---F---DRSVFFPPTYSCYR-IFAKAVGAKFLEVPLTK--DLR---------I---PEV----NVG 137 (335)
T ss_pred CCHHHHHHHHHHH---h---CcEEECCCCHHHHH-HHHHHcCCeEEEecCCC--cCC---------C---Chh----Hcc
Confidence 9999999999874 3 56888899888543 34444454444433211 110 0 111 122
Q ss_pred cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CC
Q 015230 179 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GG 256 (411)
Q Consensus 179 ~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G 256 (411)
.++++++...+|++|...+ .+++.+++ +++++||+||+|.+| ...............-+.||||.++ +|
T Consensus 138 ----~~~~i~i~nP~NPTG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~G 208 (335)
T PRK14808 138 ----EGDVVFIPNPNNPTGHVFE----REEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAA 208 (335)
T ss_pred ----CCCEEEEeCCCCCCCCCcC----HHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcc
Confidence 2344444444445565555 45555666 589999999999877 2111111112222233568999999 89
Q ss_pred cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe
Q 015230 257 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 335 (411)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 335 (411)
+|+||+++++++++.+.... .+++.+.+++.++.++++..+. ++..+.++++.+++.+.|+++ ++. ...
T Consensus 209 lRvG~~v~~~~~~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~-~~~ 278 (335)
T PRK14808 209 QRIGYVVSSEKFIDAYNRVR-----LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM----GYR-ITD 278 (335)
T ss_pred cceEEEEeCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCE-ECC
Confidence 99999999999998886422 2455677788877777653221 333344455555555555543 432 223
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHH
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
+.|.++|+.+... +..++.+.|.++||.|.... ..+|++.. +.++.+++++.|++
T Consensus 279 ~~g~f~~~~l~~~--------------~~~~~~~~l~~~Gi~V~~~~-~~~Risi~-~~~~~~~~~~~l~~ 333 (335)
T PRK14808 279 SRGNFVFIFMEKE--------------EKERLLEHLRAKNIAVRSFR-EGVRITIG-KREENDMILKELEV 333 (335)
T ss_pred CCCeEEEEeCCCc--------------cHHHHHHHHHHCCeEEEECC-CCeEEecC-CHHHHHHHHHHHHh
Confidence 4688889877421 12678899999999999753 56888854 66889999999875
No 191
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.94 E-value=3.3e-24 Score=204.33 Aligned_cols=306 Identities=13% Similarity=0.112 Sum_probs=190.7
Q ss_pred CCCHHHHHHHHHHHhhCC-----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC
Q 015230 73 APCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 147 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (411)
+..++++++++++.+.++ .+++|++|+|+++|++.++.. .+.+++.|++..|.|++.........|..+..++
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~--l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~ 173 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFI--LADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIH 173 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHH--hCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEe
Confidence 457889999999987653 578999999999999997763 2356678888888887654333223444444333
Q ss_pred CCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEec
Q 015230 148 LPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224 (411)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De 224 (411)
.....++. -|++++++++++ .+.+++++++...+|++|... +++.+++|.++|++|+++||+||
T Consensus 174 ~~~~~~f~------------~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~-s~e~l~~l~~~~~~~~i~lI~DE 240 (447)
T PLN02607 174 CDSSNNFQ------------VTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATV-QRSVLEDILDFVVRKNIHLVSDE 240 (447)
T ss_pred CCCCCCCc------------CCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCccc-CHHHHHHHHHHHHHCCCEEEEec
Confidence 22112221 178889888864 123555555443344455443 45569999999999999999999
Q ss_pred ccccc-ccccCc--ccc---ccCC-C-cc----hhhhhhhcc-CCcccccccc-cHHHHHHhcCCCCcccccCC-CCCHH
Q 015230 225 VMTGF-RLAYGG--AQE---YFGV-T-PD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTL-SGNPL 289 (411)
Q Consensus 225 ~~~g~-~~g~~~--~~~---~~~~-~-~d----~~~~sK~~~-~G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~-~~~~~ 289 (411)
+|+++ ..+..+ ... ..+. . ++ +.+|||.|+ +|+|+||+++ ++++++.+... ..+ ..+.+
T Consensus 241 iYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~------~~~~~~s~~ 314 (447)
T PLN02607 241 IYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRM------SSFTLVSSQ 314 (447)
T ss_pred cccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHH------hhcCCCCHH
Confidence 99865 322111 111 1110 1 22 348999998 8999999987 67776666521 122 23556
Q ss_pred HHHHHHHHHHHH--h-c--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHH
Q 015230 290 AMTAGIHTLKRL--K-E--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 364 (411)
Q Consensus 290 ~~a~~~~~l~~~--~-~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (411)
++.++.+.++.- . . ++.+++++++.+.+.+.|++ .++.......|+++|+++.+.... +..+..
T Consensus 315 ~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~----~gi~~~~~~ag~fvw~~L~~~~~~-------~~~~~e 383 (447)
T PLN02607 315 TQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRR----AGIECLKGNAGLFCWMNLSPLLET-------PTREGE 383 (447)
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHh----CCCCcccCCeeEEEEEEchHhhcC-------CCchhH
Confidence 666655554310 0 0 12233344444444444444 344433455689999998532100 111222
Q ss_pred HHHHHHHH-HcCeEeccCC------CcceeeecCC-CHHHHHHHHHHHHHHHHh
Q 015230 365 ARFYRGML-EEGVYFAPSQ------FEAGFTSLAH-SSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 365 ~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~-t~~~i~~~i~~l~~~~~~ 410 (411)
.++.+.+. ++||.+.||. .+.+|+++.. +++++++++++|.+++.+
T Consensus 384 ~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 384 LALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 46666665 5699999984 2358998885 899999999999988753
No 192
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.6e-24 Score=203.46 Aligned_cols=333 Identities=15% Similarity=0.126 Sum_probs=211.7
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhC-C-CCCEEEEeCChHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAV-P-SIEMVRFVNSGTEACMGVL 109 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~-~-~~~~v~~~~~g~~a~~~al 109 (411)
|..++||..+. +....++.+.+++.+.......|. +..++++.+++++...- + .+++|++|+|+++|+..++
T Consensus 29 ~~~~i~l~~~~---~~~~~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 105 (397)
T PRK07568 29 GIKVYHLNIGQ---PDIKTPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAM 105 (397)
T ss_pred CCCEEEecCCC---CCCCCCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHH
Confidence 45578888773 322246788888877654432332 34667788888776321 2 5789999999999999988
Q ss_pred HHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEE
Q 015230 110 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 189 (411)
Q Consensus 110 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~ 189 (411)
... ..+++.|++.++.|.. +.......|..+..++.....++. ..+++++++.++. +++++++
T Consensus 106 ~~l--~~~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~v~~~~~~g~~-----------~~~~~~l~~~~~~---~~~~v~i 168 (397)
T PRK07568 106 MAI--CDPGDEILVPEPFYAN-YNGFATSAGVKIVPVTTKIEEGFH-----------LPSKEEIEKLITP---KTKAILI 168 (397)
T ss_pred HHh--cCCCCEEEEecCCCcc-HHHHHHHcCCEEEEeecCcccCCC-----------CCCHHHHHHhcCc---cceEEEE
Confidence 743 3456788888887764 333344445444443322111210 0157888887752 4555554
Q ss_pred cccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC--ccccccCCC---cchhhhhhhcc-CCcccccc
Q 015230 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVT---PDLTTLGKIIG-GGLPVGAY 262 (411)
Q Consensus 190 ~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~--~~~~~~~~~---~d~~~~sK~~~-~G~~~g~~ 262 (411)
..++|++|.+.+ .+.+++|.++|+++++++|+||+|.+| ..+.. ......+.. ..+.||||.++ +|+|+||+
T Consensus 169 ~~p~NPtG~~~~-~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~ 247 (397)
T PRK07568 169 SNPGNPTGVVYT-KEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCL 247 (397)
T ss_pred ECCCCCCCccCC-HHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEE
Confidence 444555666554 444999999999999999999999988 44421 111111212 22448999999 69999999
Q ss_pred cc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeec
Q 015230 263 GG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYIS 338 (411)
Q Consensus 263 ~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~g 338 (411)
++ ++++++.+.... . .+++.+.+++.++.++++..+. +++++.++++.+.+.+.|+++ +... .....|
T Consensus 248 ~~~~~~~~~~~~~~~---~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~p~g~ 319 (397)
T PRK07568 248 ISKNKELIAAAMKLC---Q-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKI----PGVVCEKPKGA 319 (397)
T ss_pred ecCCHHHHHHHHHHh---h-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCceecCCCcc
Confidence 87 467777654211 1 1356677777777777652211 345555666666666666553 2222 223346
Q ss_pred ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH------cCeEeccCC---------CcceeeecCCCHHHHHHHHHH
Q 015230 339 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE------EGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITA 403 (411)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gi~v~~~~---------~~~~~~~~~~t~~~i~~~i~~ 403 (411)
+++|+.+... +..++.+.+.+ +||.+.|+. .+.+|++++.+++++++++++
T Consensus 320 ~~~~~~l~~~--------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~ 385 (397)
T PRK07568 320 FYIIAKLPVD--------------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEI 385 (397)
T ss_pred eEEEEecCCC--------------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHH
Confidence 6788877421 12466676654 599999863 135899888889999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|.+++++
T Consensus 386 l~~~l~~ 392 (397)
T PRK07568 386 LKEALEK 392 (397)
T ss_pred HHHHHHH
Confidence 9998865
No 193
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.6e-24 Score=200.57 Aligned_cols=311 Identities=16% Similarity=0.152 Sum_probs=197.1
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
.+..++||..|. ++++ .+|.+.+++.+++.......|+..-...+.+.+++.++ .+++|++|+|+++++..+++.
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~- 91 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKL- 91 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHH-
Confidence 345678988884 3443 66889999988886422222333334556666666665 789999999999999887763
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
+ .++.|++..++|.. +.......|..+..++.....++ |++.+++.+. +....++++|
T Consensus 92 --~-~gd~V~v~~P~y~~-~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~~~---~~~~v~~~~P- 149 (337)
T PRK03967 92 --F-EGKHIVITPPTFGM-YSFYAKLNGIPVIDVPLKEDFTI--------------DGERIAEKAK---NASAVFICSP- 149 (337)
T ss_pred --h-CCCeEEEeCCChHH-HHHHHHHcCCeEEEeecCCCCCc--------------CHHHHHHhcc---CCCEEEEeCC-
Confidence 3 46889999999874 33333444554444333211111 7788876543 2233444555
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
+|++|...+ .++|.++++ +++++|+||+|.+| ........+......-+.||||.|+ +|+|+||+++++++++
T Consensus 150 ~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~ 224 (337)
T PRK03967 150 NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIID 224 (337)
T ss_pred CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHH
Confidence 566677766 667777874 79999999999877 2211111111111223458999999 8999999999999988
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
.+.... ..++.+.+++.++..+++..+. .+.+..+.+....+.+.|++. . ....|+++|+.+
T Consensus 225 ~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~----~~~~~~~~~~~~---- 287 (337)
T PRK03967 225 ALYRIK-----PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY----A----YPSDANFLLLKL---- 287 (337)
T ss_pred HHHhhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC----c----CCCCCcEEEEhH----
Confidence 887432 2345677888888777753211 222233334444444444332 1 234577888755
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCC---CcceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.+.+.|.++||.+.++. .+.+|+++. +.++.+++++.|+++..
T Consensus 288 ----------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~-~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 ----------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG-KREENDEFIKALKEIKE 333 (337)
T ss_pred ----------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHH
Confidence 25788889999997653 345788866 56778888888877654
No 194
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=2.3e-24 Score=201.81 Aligned_cols=322 Identities=15% Similarity=0.095 Sum_probs=199.5
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 114 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~ 114 (411)
..++||..+. ++++ .++.+.+++.+.+.....|+.+ ....+.+.+++.++ .+++|++|+|+++++..+++.
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y~~~--~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~--- 93 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRHYPDP--DYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRE--- 93 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcCCCc--CHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH---
Confidence 4678988774 4544 7788999988877663333322 23455566666556 788999999999999988873
Q ss_pred ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 115 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 115 ~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
+.+++.|++.+|+|.... ......|..+..++.....+... ...+++++++.. +.....++++| +|
T Consensus 94 l~~g~~vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~~~---------~~~~~~~~~~~~---~~~~~~~l~nP-~N 159 (360)
T PRK07392 94 LAQLRAVYLITPAFGDYR-RALRAFGATVKELPLPLDQPSPG---------LTLRLQTLPPQL---TPNDGLLLNNP-HN 159 (360)
T ss_pred hCCCCeEEEECCCcHHHH-HHHHHcCCeEEEEecccccCCcc---------cccCHHHHHHhc---cCCCEEEEeCC-CC
Confidence 335578999999998644 44444555554443322211100 001455554332 22333444555 55
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-ccc---cccCCCcchhhhhhhcc-CCcccccccccHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ---EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 268 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~---~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~ 268 (411)
++|...+ .++|.++++++++ +|+||+|.+| ..+.. ... +......-+.||||.++ +|+|+||+++++++
T Consensus 160 PTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 160 PTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH
Confidence 5676666 6788888999985 6669999988 44421 111 11112233458999999 99999999999999
Q ss_pred HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEec
Q 015230 269 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 347 (411)
Q Consensus 269 ~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 347 (411)
++.+.... ..++.+.+++.++.++++...- +..++.++++.+++.+.|+.+ +......+.|+++|+++..
T Consensus 235 ~~~~~~~~-----~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~fl~~~~~~ 305 (360)
T PRK07392 235 LQRWQQWR-----DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASL----PGLTPLPSAANFLLVQSQG 305 (360)
T ss_pred HHHHHhhC-----CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEECCCCCCEEEEEcCC
Confidence 88876322 2466788888888877753111 233344555555555555443 3222233557788876632
Q ss_pred CCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCCC------cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~------~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
+..++.+.+ .++||.+.|+.. +.+|+++... ++.+++.+.|+++++
T Consensus 306 ---------------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~-~~~~~l~~al~~~~~ 358 (360)
T PRK07392 306 ---------------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTE-AENQRLLEALAAILA 358 (360)
T ss_pred ---------------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHhh
Confidence 125677665 567999998842 3578887653 445666666666554
No 195
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.1e-25 Score=205.75 Aligned_cols=309 Identities=13% Similarity=0.085 Sum_probs=197.3
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
..+++.+|. +++| .++.+ .... ...|++....++.+++++.++ .+++|++|+|+++++..+++.. .
T Consensus 29 ~~~~l~~Ne--np~~-~~~~~------~~~~--~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~--~ 95 (351)
T PRK01688 29 GDVWLNANE--YPTA-VEFQL------TQQT--LNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAF--C 95 (351)
T ss_pred CceEecCCC--CCCC-CChhh------cccc--cccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh--c
Confidence 358888876 6666 33332 1111 233565556899999999988 8899999999999999998742 2
Q ss_pred cC-CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 116 TG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 116 ~~-~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
.+ ++.|++.+++|... .......|..+..++....... |++++++.++ +++++++...+|
T Consensus 96 ~~g~~~vli~~P~y~~y-~~~~~~~G~~~~~v~~~~~~~~--------------d~~~l~~~~~----~~~lv~l~nPnN 156 (351)
T PRK01688 96 EPGKDAILYCPPTYGMY-SVSAETIGVEIRTVPTLDNWQL--------------DLPAIADNLD----GVKVVYVCSPNN 156 (351)
T ss_pred CCCCCEEEEcCCCHHHH-HHHHHHcCCEEEEeecCCCCCC--------------CHHHHHHhcc----CCcEEEEeCCCC
Confidence 23 36788888998743 3334445554444333211111 7888887763 344444444455
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCc-cccccCCCcchhhhhhhcc-CCcccccccccHHHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~-~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~ 271 (411)
++|...+ .+.+++|.+.|++ +++||+||+|.+| ...... .....+...-+.||||+++ +|+|+||+++++++++.
T Consensus 157 PTG~~~~-~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~ 234 (351)
T PRK01688 157 PTGNLIN-PQDLRTLLELTRG-KAIVVADEAYIEFCPQASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINL 234 (351)
T ss_pred CCCCCCC-HHHHHHHHHhCCC-CcEEEEECchhhcCCCCChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHH
Confidence 5666655 3337777777765 6889999999887 221111 1111222222459999999 89999999999999988
Q ss_pred hcCCCCcccccCCCCCHHHHHHHHHHHHHH--hc-CChHHHHHHHHHHHHHHHHHHHHhcCCc-eEEeeecceEEEEEec
Q 015230 272 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTE 347 (411)
Q Consensus 272 ~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~ 347 (411)
+.+.. ..++.+.+++.++.++++.. +. ++.++.+++..+++.+.|+++ +.. ......++++++.+.+
T Consensus 235 l~~~~-----~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~ps~~nfi~~~~~~ 305 (351)
T PRK01688 235 LLKVI-----APYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI----PCVEQVFDSETNYILARFTA 305 (351)
T ss_pred HHhcc-----CCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC----CCCCeECCCCCcEEEEEcCC
Confidence 87422 24556667777776666421 11 233344555555666666543 322 2224457788887631
Q ss_pred CCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-----CcceeeecCCCHHHHHHHHHHHH
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~~~~~~~~t~~~i~~~i~~l~ 405 (411)
..++.+.|.++||.+++++ .+.+|+++. +.+++++++++|+
T Consensus 306 ----------------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 306 ----------------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred ----------------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 2678899999999998653 345888866 7899999998873
No 196
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=3.1e-24 Score=203.80 Aligned_cols=343 Identities=14% Similarity=0.082 Sum_probs=213.3
Q ss_pred CCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a 104 (411)
.|..++++..+.......+ .++.+++++.+.+.... .|+ +..++++.+++++....+ .++++++|+|+++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 4678899888832110123 67889999988887632 232 234556777777765433 46799999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
+..+++.. ..+++.|++..++|... .......|..+..++.....+.. -|++++++.+.. ++
T Consensus 109 l~~~~~~l--~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~------------~d~~~l~~~~~~---~~ 170 (403)
T TIGR01265 109 IEICIEAL--ANPGANILVPRPGFPLY-DTRAAFSGLEVRLYDLLPEKDWE------------IDLDGLEALADE---KT 170 (403)
T ss_pred HHHHHHHh--CCCCCEEEEeCCCchhH-HHHHHHcCCEEEEecCCcccCCc------------cCHHHHHHHhCc---Cc
Confidence 99999854 24567899988888653 33333444444433321111110 178999887753 34
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccC-cccccc-C--CCcchhhhhhhcc-CCcc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-G--VTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~-~~~~~~-~--~~~d~~~~sK~~~-~G~~ 258 (411)
+++++...+|++|...+ .+.+++|.++|+++|+++|+||+|.+| ..+.. .....+ . ....+.||||.++ +|+|
T Consensus 171 ~~v~i~~p~NPtG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFS-RDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWR 249 (403)
T ss_pred cEEEEecCCCCCCCCCC-HHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcce
Confidence 44444444555666554 333999999999999999999999988 44321 111111 1 1122458999987 7999
Q ss_pred ccccccc--HH-----HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh-c--CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 259 VGAYGGR--RD-----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-E--PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 259 ~g~~~~~--~~-----~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~-~--~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+||++++ +. +++.+.. +...+++.+.+++.++.++++... . ++.++.++++.+++.+.|+.. .
T Consensus 250 iG~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 322 (403)
T TIGR01265 250 LGWIIIHDPHGIFRDTVLQGLKN----LLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI---P 322 (403)
T ss_pred EEEEEEeCchhhhHHHHHHHHHH----HhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 9999763 22 3333321 111234567788888877775311 1 344555556655665655543 1
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC----CcceeeecCCCHHHHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITA 403 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~ 403 (411)
++.......|+++|+++...... ...+..++.+.+ .++||.+.|+. .+.+|+++...++++++++++
T Consensus 323 ~~~~~~p~~g~f~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~ 394 (403)
T TIGR01265 323 GLVCPKPEGAMYLMVKLELELFP--------EIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSR 394 (403)
T ss_pred CceecCCCceeEEEEeccccccC--------CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHH
Confidence 22212344688999988532100 001125676665 57899999974 245799888889999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|.+++++
T Consensus 395 l~~~~~~ 401 (403)
T TIGR01265 395 IKEFCER 401 (403)
T ss_pred HHHHHHh
Confidence 9998865
No 197
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.9e-24 Score=201.82 Aligned_cols=321 Identities=16% Similarity=0.160 Sum_probs=205.3
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+..++||..|. ++++ .++.+.+++.+.......|+.+.. ..+.+.+++.++ .+++|++|+|+++++..++...
T Consensus 35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y~~~~g--~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~- 108 (371)
T PRK05166 35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLYPDPQG--RALREAIAARTGVPADRIILGNGSEDLIAVICRAV- 108 (371)
T ss_pred CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcCCCCcH--HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-
Confidence 45789999884 4454 677888888776554333332222 367777777776 6789999999999998888742
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
..+++.|++..++|+... ......|..+..++.....++ |++++++.++. +++++++...+
T Consensus 109 -~~~gd~vli~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~~---~~~~v~l~~p~ 169 (371)
T PRK05166 109 -LRPGDRVVTLYPSFPLHE-DYPTMMGARVERVTVTPDLGF--------------DLDALCAAVAR---APRMLMFSNPS 169 (371)
T ss_pred -cCCCCEEEEcCCChHHHH-HHHHHcCCeEEEeecCCCCCC--------------CHHHHHHhhhc---CCCEEEEeCCC
Confidence 345678889888887532 233344444444332211122 78899888864 33555554455
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Ccccccc-CC---Ccchhhhhhhcc-CCccccccc-cc
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF-GV---TPDLTTLGKIIG-GGLPVGAYG-GR 265 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~~~~~-~~---~~d~~~~sK~~~-~G~~~g~~~-~~ 265 (411)
|++|.+.+ .+.+++|.++|++ ++++|+||+|..| ..+. ....... .. ..-+.||||.++ +|+|+||++ .+
T Consensus 170 NPtG~~~~-~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 170 NPVGSWLT-ADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCCCCCC-HHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC
Confidence 56776665 3337777777764 8899999999877 3221 1111111 11 123458999999 899999975 47
Q ss_pred HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEE
Q 015230 266 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 344 (411)
Q Consensus 266 ~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~ 344 (411)
+++++.+.... ..++.+.+++.++.+++..-.. ++.++.++++.+++.+.|++. ++.. ....|+++|++
T Consensus 248 ~~l~~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~-~p~~g~fl~~~ 317 (371)
T PRK05166 248 PELVGLLDRVR-----TPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM----GYRI-APSRANFLFFD 317 (371)
T ss_pred HHHHHHHHHhc-----cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----cCee-CCCcCCEEEEe
Confidence 88887775322 2455677887777766642111 334445555556666666554 4322 34458888887
Q ss_pred EecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 345 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
+.. +..++.+.|.++||.+.++. .+.+|+++. +.++.+++++.|++++
T Consensus 318 ~~~---------------~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~-~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 318 ARR---------------PASAVAEALLRQGVIVKPWKQPGFETFIRVSIG-SPEENDHFVAALDKVL 369 (371)
T ss_pred CCC---------------CHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 521 12678899999999999874 335788877 5667888888887664
No 198
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.93 E-value=1.8e-24 Score=199.77 Aligned_cols=304 Identities=18% Similarity=0.172 Sum_probs=191.5
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+..+++|..+. ++++. | ..+...+.+.. |++....++.+++++.++ .++++++|+|+++++..+.++
T Consensus 16 ~~~~~~~~~~~--~~~~~--~-~~~~~~~~~~~-----y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~-- 83 (330)
T TIGR01140 16 PEDWLDFSTGI--NPLGP--P-VPPIPASAWAR-----YPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRL-- 83 (330)
T ss_pred hhheeEccccC--CCCCC--C-hhhcchHHHhh-----CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH--
Confidence 34678988886 44443 2 22222222222 222224777777777776 578999999999999886653
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
+.++ +|++.+++|+..... ....|. ++..++ |++++++.+++ ...+++++| +
T Consensus 84 -l~~g-~vl~~~p~y~~~~~~-~~~~g~-------------------~~~~~~--d~~~l~~~~~~---~~~v~i~~p-~ 135 (330)
T TIGR01140 84 -LAPG-RVLVLAPTYSEYARA-WRAAGH-------------------EVVELP--DLDRLPAALEE---LDVLVLCNP-N 135 (330)
T ss_pred -hCCC-eEEEeCCCcHHHHHH-HHHcCC-------------------EEEEeC--CHHHHHhhccc---CCEEEEeCC-C
Confidence 3333 788888888764322 222222 233333 78888887742 234455555 5
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccc-cccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-EYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~-~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
|++|.+.+ .+.+++|.++|++||+++|+||+|.++ ........ +..+...-+.||||.++ +|+|+||+++++++++
T Consensus 136 NPtG~~~~-~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~ 214 (330)
T TIGR01140 136 NPTGRLIP-PETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLA 214 (330)
T ss_pred CCCCCCCC-HHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHH
Confidence 55666554 555999999999999999999999877 32211111 11111112348999999 7999999999999988
Q ss_pred HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCC
Q 015230 271 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 350 (411)
Q Consensus 271 ~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 350 (411)
.+.... ..++.+.++++++.+.++ +++..++.+++.+..++.+.+.....+......+.|+++|+.+.+
T Consensus 215 ~l~~~~-----~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~--- 283 (330)
T TIGR01140 215 RLREAL-----GPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD--- 283 (330)
T ss_pred HHHhcC-----CCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC---
Confidence 887432 245567777777776665 223333333444444444444433345333334567888887632
Q ss_pred CCcchhcccchHHHHHHHHHHHHcCeEeccCCC------cceeeecCCCHHHHHHHHHHH
Q 015230 351 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAA 404 (411)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------~~~~~~~~~t~~~i~~~i~~l 404 (411)
..++.+.|.++||.+.|+.. +.+|+++....++ ++++.+|
T Consensus 284 -------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 284 -------------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred -------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 15788999999999999742 3588888766665 8877765
No 199
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.93 E-value=2.3e-24 Score=202.58 Aligned_cols=327 Identities=16% Similarity=0.178 Sum_probs=207.8
Q ss_pred EEEeccCCccccccCC-CcHHHHHHHHHHHH----cC--CCCCC---CCHHHHHHHHHHHhhCC---CCC-EEEEeCChH
Q 015230 37 EYIDYVGSWGPAIIGH-ADDQVLAALGETMK----KG--TSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGT 102 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~----~~--~~~~~---~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~ 102 (411)
+++||.+| ++... .++.+.+++.+..+ .. ..|+. ..++++.+++++.+..+ ..+ .+++++|..
T Consensus 2 ~~I~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSN---APLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQ 78 (363)
T ss_dssp TEEESSSS---STSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHH
T ss_pred CEEEEECC---CCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccc
Confidence 47899888 55444 55555555544433 12 22221 25556677776664333 467 788888777
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK- 181 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~- 181 (411)
+++..++.+. ...+++.|++.+++|... .......|..+..++.....+. +.|++++++.+++.+
T Consensus 79 ~~~~~~~~~~-~~~~~~~vlv~~P~y~~~-~~~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~~~~ 144 (363)
T PF00155_consen 79 AALFLLLRLL-KINPGDTVLVPDPCYPSY-IEAARLLGAEVIPVPLDSENDF------------HLDPEALEEALDELPS 144 (363)
T ss_dssp HHHHHHHHHH-HSSTTSEEEEEESSSTHH-HHHHHHTTSEEEEEEEEETTTT------------EETHHHHHHHHHTSHT
T ss_pred cchhhhhhcc-cccccccceecCCccccc-cccccccCceeeeccccccccc------------cccccccccccccccc
Confidence 7776666542 244678899988888854 3444444543333221101111 228999999999632
Q ss_pred C--cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCc-c-ccccCCCcc---hhhhhhhc
Q 015230 182 G--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGG-A-QEYFGVTPD---LTTLGKII 253 (411)
Q Consensus 182 ~--~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~-~-~~~~~~~~d---~~~~sK~~ 253 (411)
+ ++.+++++.++|++|...+ .+.+++|.++|++|++++|+||+|.++..+ ..+ . .......++ +.|+||.+
T Consensus 145 ~~~~~~~v~~~~p~nPtG~~~~-~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 223 (363)
T PF00155_consen 145 KGPRPKAVLICNPNNPTGSVLS-LEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF 223 (363)
T ss_dssp TTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT
T ss_pred cccccceeeecccccccccccc-cccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc
Confidence 2 3466666666667776554 444999999999999999999999877222 211 1 111122222 44899999
Q ss_pred c-CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh----c-CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 254 G-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK----E-PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 254 ~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~----~-~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
+ .|+|+||+++++++++.+.. ....+..+.+.++++.+.+.... . ++.+++++++.+++.+.|++.
T Consensus 224 g~~GlRvG~i~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--- 295 (363)
T PF00155_consen 224 GLPGLRVGYIVAPPELIERLRR-----FQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI--- 295 (363)
T ss_dssp TSGGGTEEEEEEEHHHHHHHHH-----HHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred cccccccccccchhhhhhhhhh-----ccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh---
Confidence 8 79999999999999888873 11233336666666666655332 1 445555666666666666554
Q ss_pred cCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCC----cceeeec-CCCHHHHHHHH
Q 015230 328 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSL-AHSSDDIQHTI 401 (411)
Q Consensus 328 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----~~~~~~~-~~t~~~i~~~i 401 (411)
++.......|+++|+.+.. . +..++.+.|.++ ||.+.|+.. +.+|+++ .++++++++++
T Consensus 296 -~~~~~~~~~~~~~~~~~~~-------------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~ 360 (363)
T PF00155_consen 296 -GITVLPPEAGFFLWVRLDP-------------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEAL 360 (363)
T ss_dssp -TSEEEHHSBSSEEEEEESH-------------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHH
T ss_pred -hhheeeccCccEEEEEccc-------------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHH
Confidence 5444444567788887732 1 457888889988 999999643 3588887 88999999999
Q ss_pred HHH
Q 015230 402 TAA 404 (411)
Q Consensus 402 ~~l 404 (411)
++|
T Consensus 361 ~~l 363 (363)
T PF00155_consen 361 ERL 363 (363)
T ss_dssp HHH
T ss_pred hhC
Confidence 986
No 200
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.93 E-value=1.8e-24 Score=205.33 Aligned_cols=337 Identities=14% Similarity=0.107 Sum_probs=199.8
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC------CCC---CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG------TSF---GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEA 104 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~------~~~---~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a 104 (411)
.+..++|+..+. .+++ .+|.+.+++.+.+.+. ..| .+..++++.+++++.+..-.+++|++|+|++++
T Consensus 31 ~~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~a 107 (402)
T TIGR03542 31 PSADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCD 107 (402)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHH
Confidence 367789988883 2232 5778889988887753 112 234566777777653321268999999999999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCC-CCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCc
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 183 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 183 (411)
+..++. .+.+++.|++.+|+|.+....+. ..|. ++.. . .+. ...+..++.++-+.+..-+... .+
T Consensus 108 l~~l~~---l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~~---~--~~~----~~~~~~v~~~~~~~~~~~~~~~-~~ 173 (402)
T TIGR03542 108 VFRLQS---LFGSDNTVAVQDPVYPAYVDSNV-MAGRAGVLD---D--DGR----YSKITYLPCTKENNFIPDLPEE-PK 173 (402)
T ss_pred HHHHHH---hcCCCCEEEEeCCCCcchHHHHH-HcCCccccc---c--ccc----cceEEEeecchhhCCCCCcccc-CC
Confidence 987543 34567889999999987544433 3333 1110 0 000 0012222211000000001111 24
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc-Ccc-cccc---CCCcchhhhhhhcc-CC
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGA-QEYF---GVTPDLTTLGKIIG-GG 256 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~-~~~-~~~~---~~~~d~~~~sK~~~-~G 256 (411)
+++++++..+|++|...+ .+.+++|.++|++|+++||+||+|.+| ..+. ... .... +....+.||||.++ +|
T Consensus 174 ~~~i~l~nP~NPTG~~~s-~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pG 252 (402)
T TIGR03542 174 IDIIYLCSPNNPTGTVLT-KEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTG 252 (402)
T ss_pred ceEEEEeCCCCCCCccCC-HHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCC
Confidence 555555544555665544 445999999999999999999999987 3331 111 1111 12233569999998 89
Q ss_pred cccccccccHHHH--------HHhcCCCCcccccCCCCCHHHHHHHHHHHHHH--hc-CChHHHHHHHHHHHHHHHHHHH
Q 015230 257 LPVGAYGGRRDIM--------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 257 ~~~g~~~~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~--~~-~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
+|+||++++++++ +.+.. .......+.+.+++.++..+++.. .. .+.++.++++.+++.+.|++.
T Consensus 253 lRiG~~i~~~~l~~~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 253 VRLGWTVVPKELTYADGHSVIQDWER---RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred cceEEEEecHHHhhcchhhHHHHHHH---HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999988876 22210 011112245667777766655321 10 223344555555566665543
Q ss_pred HhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCC------CcceeeecCCCHHHHH
Q 015230 326 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQ 398 (411)
Q Consensus 326 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~------~~~~~~~~~~t~~~i~ 398 (411)
+........|+++|+++... .+..++.+.+. ++||.+.|+. .+.+|+++..++++++
T Consensus 329 ---~~~~~~~~~~~f~~v~l~~~-------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~ 392 (402)
T TIGR03542 329 ---GFKVYGGEHAPYLWVKTPEG-------------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIV 392 (402)
T ss_pred ---CceecCCCceeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHH
Confidence 32222223577999988431 11256777776 5699999973 2457888777999999
Q ss_pred HHHHHHHHHH
Q 015230 399 HTITAAEKVL 408 (411)
Q Consensus 399 ~~i~~l~~~~ 408 (411)
+++++|+++|
T Consensus 393 ~~l~~l~~~~ 402 (402)
T TIGR03542 393 EACERIKEAL 402 (402)
T ss_pred HHHHHHHhhC
Confidence 9999998763
No 201
>PRK08354 putative aminotransferase; Provisional
Probab=99.92 E-value=3.8e-23 Score=189.36 Aligned_cols=298 Identities=17% Similarity=0.086 Sum_probs=188.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+...++||..|. ++++ ++.+.+++.++++....|.. ...+.+++++.++ ++|++|+|+++++..++.+
T Consensus 6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~~yp~----~~~l~~~ia~~~~--~~I~vt~G~~~al~~~~~~-- 73 (311)
T PRK08354 6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEISGRYTY----YEWLEEEFSKLFG--EPIVITAGITEALYLIGIL-- 73 (311)
T ss_pred CccceeEecCCC--CCCC--CHHHHHHHHHHHHHhhcCCC----hHHHHHHHHHHHC--CCEEECCCHHHHHHHHHHh--
Confidence 334689999874 5554 67889999887665333332 2456666766664 5799999999999877652
Q ss_pred hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 114 ~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
..+++.|++.+++|......+ ...|..+.. ++ .|++.+++.+++ ...+++++|.
T Consensus 74 -~~~gd~vlv~~P~y~~~~~~~-~~~g~~~~~-------------------~~-~d~~~l~~~~~~---~~~vi~~~P~- 127 (311)
T PRK08354 74 -ALRDRKVIIPRHTYGEYERVA-RFFAARIIK-------------------GP-NDPEKLEELVER---NSVVFFCNPN- 127 (311)
T ss_pred -hCCCCeEEEeCCCcHHHHHHH-HHcCCEEee-------------------cC-CCHHHHHHhhcC---CCEEEEecCC-
Confidence 236788999999998654433 333332211 11 178888877762 3456777775
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~ 271 (411)
|++|...+ .+.+++|.++|++||+++|+||+|.+| ..+.. .. .....-+.||||.++ +|+|+||+++ +.+.
T Consensus 128 NPTG~~~~-~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~ 200 (311)
T PRK08354 128 NPDGKFYN-FKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEA 200 (311)
T ss_pred CCCCCccC-HHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHHH
Confidence 45565544 444999999999999999999999988 33321 11 122233559999999 8999999987 3334
Q ss_pred hcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCC
Q 015230 272 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 351 (411)
Q Consensus 272 ~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 351 (411)
+.... ..+..+..+++++.+.++ +. .+++++..+.+++..+.+..... ..+.|.++++++.
T Consensus 201 l~~~~-----~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~----- 261 (311)
T PRK08354 201 FRSVR-----MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKALY----VKSDANFFIKDVG----- 261 (311)
T ss_pred HHHcC-----CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhcC----CCCCCcEEEEECC-----
Confidence 43211 133445555555544433 11 23444444444444444322111 1344666666442
Q ss_pred CcchhcccchHHHHHHHHHHHHcCeEeccCCC----cceeeecCCCHHHHHHHHHHHHHH
Q 015230 352 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
+ ..++.+.|.++||.+.++.. +.+|+++. +.++.+++++.|+++
T Consensus 262 --------~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 --------D---AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR-DREENEKLIRALREW 309 (311)
T ss_pred --------C---HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 1 25788889999999999853 45788766 445677788877764
No 202
>PLN02231 alanine transaminase
Probab=99.92 E-value=2.5e-23 Score=201.63 Aligned_cols=333 Identities=14% Similarity=0.130 Sum_probs=203.1
Q ss_pred cHHHHHHHHHHHHc--CC---CC---CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEE
Q 015230 54 DDQVLAALGETMKK--GT---SF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERII 122 (411)
Q Consensus 54 ~~~v~~a~~~~l~~--~~---~~---~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi 122 (411)
+.++++.+.+.+.. +. .| .+..++++.+++++.+..+ .+++|++|+|+++|+..++++. ...+++.|+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l-~~~~gd~Vl 220 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL-IRSEKDGIL 220 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHh-ccCCCCEEE
Confidence 33555555566654 21 12 2347788999999988654 6889999999999999999853 113568899
Q ss_pred EEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC---CcEEE-EEEcccCCCCCc
Q 015230 123 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAA-IILEPVVGNSGF 198 (411)
Q Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~---~~~~~-vi~~~~~~~~G~ 198 (411)
+..|+|+... ......|..+..++.....++.. |++++++.++... .++++ ++++| +|++|.
T Consensus 221 i~~P~Y~~y~-~~~~~~g~~~v~~~l~~~~~~~~------------d~~~Le~~l~~~~~~~~~~k~ivl~nP-~NPTG~ 286 (534)
T PLN02231 221 CPIPQYPLYS-ASIALHGGTLVPYYLDEATGWGL------------EISELKKQLEDARSKGITVRALVVINP-GNPTGQ 286 (534)
T ss_pred EeCCCChhHH-HHHHHcCCEEEEEecCcccCCCC------------CHHHHHHHHHHHhhcCCCeEEEEEeCC-CCCCCc
Confidence 9999998644 44444454444433321111110 8999999887421 13554 55556 444554
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc-ccCc-cc-cc---cCC---C---cchhhhhhhc-c-CCccccccc
Q 015230 199 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-AQ-EY---FGV---T---PDLTTLGKII-G-GGLPVGAYG 263 (411)
Q Consensus 199 ~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~-g~~~-~~-~~---~~~---~---~d~~~~sK~~-~-~G~~~g~~~ 263 (411)
+. +.+.+++|.++|++|+++||+||+|..+ .. +..+ .+ .. .+. . ..+.||||.+ + +|+|+||+.
T Consensus 287 vl-s~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~ 365 (534)
T PLN02231 287 VL-AEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYME 365 (534)
T ss_pred CC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEE
Confidence 44 4555999999999999999999999887 42 3221 11 00 111 1 1234899987 5 699999996
Q ss_pred c---cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH-------Hh----c-CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 264 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-------LK----E-PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 264 ~---~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~-------~~----~-~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+ ++++++.+.... ......+.+++.++..+++. +. . +++++.++++.+.+.+.|+++ .
T Consensus 366 ~~~~~~~l~~~l~k~~----~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~---~ 438 (534)
T PLN02231 366 VTGFTSDVREQIYKVA----SVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL---E 438 (534)
T ss_pred EecCCHHHHHHHHHHH----hhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 4 678888775321 12334455666666655531 11 1 234556777777777777654 1
Q ss_pred CCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC-------cceeeecCCCHHHHHHH
Q 015230 329 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTSLAHSSDDIQHT 400 (411)
Q Consensus 329 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~-------~~~~~~~~~t~~~i~~~ 400 (411)
++.......|+++|..+.-+. ..+.............++..|. +.||.+.|+.. .++|+++..++++++++
T Consensus 439 gi~~~~p~Ggfylw~~l~lp~-~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~ea 517 (534)
T PLN02231 439 GVTCNKAEGAMYLFPRIHLPQ-KAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAI 517 (534)
T ss_pred CceecCCCeeeEEeccccCcH-HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHHHH
Confidence 233333445777775442110 0000000000001134555555 56999999842 23889988899999999
Q ss_pred HHHHHHHHHh
Q 015230 401 ITAAEKVLRQ 410 (411)
Q Consensus 401 i~~l~~~~~~ 410 (411)
+++|.+++++
T Consensus 518 l~RL~~~~~~ 527 (534)
T PLN02231 518 VSRLTEFHKS 527 (534)
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 203
>PRK07908 hypothetical protein; Provisional
Probab=99.92 E-value=4.6e-23 Score=192.24 Aligned_cols=326 Identities=13% Similarity=0.132 Sum_probs=204.4
Q ss_pred CeEEEeecCcEEEecCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEE
Q 015230 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRF 97 (411)
Q Consensus 19 ~~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~ 97 (411)
|+....-+|.. ..+..++||..|. ++++ .++.+++++.+.+.....|..+ .-...+.+.+++.++ .+++|++
T Consensus 8 ~~~~~~~~~~~---~~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~aia~~~~~~~~~I~i 80 (349)
T PRK07908 8 PLAALRHHGDQ---DAGPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYPST-EDERRARAAVAARHGRTPDEVLL 80 (349)
T ss_pred hHHHHHhcccc---cCCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCCCc-cchHHHHHHHHHHhCcChhhEEE
Confidence 44444445553 2356799999883 3333 7888999999887653333211 223445555555556 7899999
Q ss_pred eCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHH
Q 015230 98 VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLF 177 (411)
Q Consensus 98 ~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 177 (411)
|+|+++++..+++ + .++++++..++|.... ......|..+..++.....++ |++.+
T Consensus 81 t~Ga~~al~~~~~----l-~~~~viv~~P~y~~~~-~~~~~~G~~i~~v~~~~~~~~--------------d~~~l---- 136 (349)
T PRK07908 81 LAGAAEGFALLAR----L-RPRRAAVVHPSFTEPE-AALRAAGIPVHRVVLDPPFRL--------------DPAAV---- 136 (349)
T ss_pred CCCHHHHHHHHHh----c-CCCeEEEeCCCChHHH-HHHHHcCCEEEeeccCcccCc--------------ChhHh----
Confidence 9999999988776 2 2367778888887543 333344554444332211111 44433
Q ss_pred HcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCC--Ccchhhhhhhcc-
Q 015230 178 ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV--TPDLTTLGKIIG- 254 (411)
Q Consensus 178 ~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~--~~d~~~~sK~~~- 254 (411)
+ ++++++++...+|++|.+.+ .++|.++|++ +.++|+||+|..+..+.......... ..-+.||||.++
T Consensus 137 ~---~~~~~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l 208 (349)
T PRK07908 137 P---DDADLVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSL 208 (349)
T ss_pred c---cCCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCC
Confidence 2 23456555445566777777 6678888864 77888999998762222111111111 122348999998
Q ss_pred CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHH--Hhc-CChHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015230 255 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR--LKE-PGTYEYLNKITGELTQGIIDAGKKAGHA 331 (411)
Q Consensus 255 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~--~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (411)
+|+|+||+++++++++.+..... .+..+++.++++.+.++. ... ++++++++++.+++.+.|+++ ++.
T Consensus 209 ~GlRiG~~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~ 279 (349)
T PRK07908 209 AGLRVGYALGAPDVLARLTRGRA-----HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV----GAR 279 (349)
T ss_pred ccceeeeeecCHHHHHHHHhcCC-----CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC----CcE
Confidence 89999999999999988874322 244455665555444431 011 334555666666666666553 332
Q ss_pred eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------CcceeeecCCCHHHHHHHHHHHH
Q 015230 332 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 332 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------~~~~~~~~~~t~~~i~~~i~~l~ 405 (411)
......|+++|+.+.+ ...+.+.|+++||.+.++. .+.+|+++. ++++++++++.|+
T Consensus 280 ~~~p~~g~~~~~~~~~----------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~ 342 (349)
T PRK07908 280 VVDPAAAPFVLVRVPD----------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALA 342 (349)
T ss_pred eccCCCceEEEEECCc----------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHH
Confidence 2233568899997732 2578889999999999863 245788874 7789999999999
Q ss_pred HHHH
Q 015230 406 KVLR 409 (411)
Q Consensus 406 ~~~~ 409 (411)
+++.
T Consensus 343 ~~~~ 346 (349)
T PRK07908 343 EILK 346 (349)
T ss_pred HHHh
Confidence 8765
No 204
>PLN02721 threonine aldolase
Probab=99.92 E-value=8.6e-23 Score=191.17 Aligned_cols=332 Identities=16% Similarity=0.135 Sum_probs=199.5
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHH-HHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGET-MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~-l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
+++||.++.+ . ..++.+++++.+. ... ..+ ++.....++.+.+++.++ .+.++++++|++++..++... .
T Consensus 6 ~~~~~~~~~~---~-~~~~~~~~a~~~~~~~~-~~~-~~~~~~~~l~~~la~~~~-~~~~~~~~~Gs~a~~~~l~~~--~ 76 (353)
T PLN02721 6 RVVDLRSDTV---T-KPTDAMRAAMANAEVDD-DVL-GYDPTALRLEEEMAKIFG-KEAALFVPSGTMGNLISVLVH--C 76 (353)
T ss_pred hhhhhhcccc---c-CCCHHHHHHHHhccCCC-ccc-CCCHHHHHHHHHHHHHhC-CceeEEecCccHHHHHHHHHH--c
Confidence 4678888843 2 3688899988664 222 122 334446777888877774 455788888999988777642 3
Q ss_pred c-CCcEEEEEeCCcCCCchh--hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC----CCcEEEEE
Q 015230 116 T-GRERIIKFEGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAII 188 (411)
Q Consensus 116 ~-~~~~vi~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~~~~~vi 188 (411)
. +++.|++.+++|...... .....|..+..++.. .... .|++++++.+++. .+++++++
T Consensus 77 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~------------~d~~~l~~~i~~~~~~~~~~~~~v~ 142 (353)
T PLN02721 77 DVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGT------------MDLDAIEAAIRPKGDDHFPTTRLIC 142 (353)
T ss_pred cCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCC------------cCHHHHHHHHHhccCCCCCcceEEE
Confidence 3 567888888887544332 222334333332211 1110 1899999998742 13577888
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCcccccc--CCCcchhhhhhhccCCccccc-ccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYF--GVTPDLTTLGKIIGGGLPVGA-YGG 264 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~--~~~~d~~~~sK~~~~G~~~g~-~~~ 264 (411)
+++++++.|....+.+.+++|.++|++||+++|+||+|.-.... .....+.. +.+--++++||++++ |+|+ +++
T Consensus 143 l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~~~ 220 (353)
T PLN02721 143 LENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVIVG 220 (353)
T ss_pred EeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEEec
Confidence 88876665445555666999999999999999999998510100 00001101 111114579999985 6776 567
Q ss_pred cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCc-e-EEeeecceEE
Q 015230 265 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHA-I-CGGYISGMFG 342 (411)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~-~~~~~g~~~~ 342 (411)
++++++.+........+ ........++++..+++... +. ..+..++.+++.+.|+++ +.. . .....+++++
T Consensus 221 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~~~ 293 (353)
T PLN02721 221 SKSFIRKAKRLRKTLGG-GMRQVGVLAAAALVALQENV-PK-LEDDHKKAKLLAEGLNQI----KGLRVNVAAVETNIVY 293 (353)
T ss_pred CHHHHHhHHHHHHhcCC-CeehhHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHhC----CCcEEecCCccceEEE
Confidence 88887765421111111 11111222333333443221 22 233345566777777654 221 1 1123356778
Q ss_pred EEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHHHHHHHHHhC
Q 015230 343 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+.+.... ......+++.|.++||.+.++....+|++ +.++++++++++++|++++..+
T Consensus 294 ~~~~~~~-----------~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~~ 353 (353)
T PLN02721 294 FDITDGS-----------RITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALTL 353 (353)
T ss_pred EEccCCc-----------cccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhcC
Confidence 8774210 01236799999999999999987778875 4679999999999999987643
No 205
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-23 Score=196.06 Aligned_cols=288 Identities=12% Similarity=0.094 Sum_probs=184.1
Q ss_pred HHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccCC-cEEEEEeCCcCCCchhhhhhcCCCCcccCCC-CCCCC
Q 015230 78 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGV 154 (411)
Q Consensus 78 ~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~ 154 (411)
..++.+.+++.++ .+++|++|+|+++++..++... ..++ +.|++.++.|. .+.......|..+..++.. ...++
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~~~g~~~vlv~~p~y~-~~~~~~~~~g~~~~~v~~~~~~~~~ 137 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRAL--CVPGRDAVLVTPPVFG-MYAVCARLQNAPLVEVPLVDGADGF 137 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHh--cCCCCCeEEEcCCChH-HHHHHHHHcCCEEEEEecCCCccCC
Confidence 4566666666666 6789999999999999988742 2334 56777777654 4444444455555544331 11222
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cccc
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~ 233 (411)
.. |++++.+.+.. .+++++++...+|++|.+.+ .+.+++|.+.|+ +++++|+||+|.+| ....
T Consensus 138 ~~------------d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~-~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~ 201 (364)
T PRK04781 138 HA------------DVPAIVAAALA--SNAKLVFLCSPSNPAGSAIA-LDQIERALQALQ-GKALVVVDEAYGEFSDVPS 201 (364)
T ss_pred Cc------------CHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcC-HHHHHHHHHhCC-CCcEEEEeCcchhhcCCcc
Confidence 11 67776554432 35566666555666777776 333666666664 47899999999987 3221
Q ss_pred C-ccccccCCCcchhhhhhhcc-CCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH--hc-CChHH
Q 015230 234 G-GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYE 308 (411)
Q Consensus 234 ~-~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~--~~-~~~~~ 308 (411)
. ...+..+...-+.||||.++ +|+|+||+++++++++.+.... ..++.+.+++.++.++++.- .. .+.++
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~-----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~ 276 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQ-----APYPVPTPCAALAEQALSAPALAVTARRVA 276 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHhcccHHHHHHHHH
Confidence 1 11122222233569999999 8999999999999999887532 24566777777777766431 11 22333
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-----C
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----F 383 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~ 383 (411)
+++++.+++.+.|+++. +........|+++|+++.+ ..++.+.|.++||.|.++. .
T Consensus 277 ~~~~~r~~l~~~L~~~~---~~~~~~p~~g~f~~~~~~~----------------~~~~~~~l~~~gI~v~~~~~~~~~~ 337 (364)
T PRK04781 277 EVRAERERLHAALAQLP---GVRRVYPSQGNFLLVRFDD----------------AEAAFQALLAAGVVVRDQRAAPRLS 337 (364)
T ss_pred HHHHHHHHHHHHHHhCC---CCCeECCCCCcEEEEEcCC----------------HHHHHHHHHHCCeEEeeCCCCCCCC
Confidence 45555555666665431 2212234568899988731 2578889999999999874 2
Q ss_pred cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 384 EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 384 ~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
+++|+++. +.++.++++++|+++..
T Consensus 338 ~~~Ris~~-~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 338 DALRITLG-TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CeEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 35788866 67889999999987653
No 206
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.9e-24 Score=201.56 Aligned_cols=342 Identities=14% Similarity=0.093 Sum_probs=190.6
Q ss_pred ccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhh-C-C---C--CCEEEEeCChHHHHHHHHHHHH-
Q 015230 45 WGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISA-V-P---S--IEMVRFVNSGTEACMGVLRLAR- 113 (411)
Q Consensus 45 ~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~-~-~---~--~~~v~~~~~g~~a~~~al~~~~- 113 (411)
++....++..|+.+..+.+++.. ..|+ +..++++++++++.+. . . . .++|++|+|+++|+..++..+.
T Consensus 105 l~~g~p~~~~~~~v~e~~~~~~~-~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~ 183 (527)
T PRK09275 105 YVRDQLGFDADEFVYELVDGIIG-DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKE 183 (527)
T ss_pred hcCCCCCCCCCHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhh
Confidence 33345567444444335565543 2332 3367788888866543 2 1 1 3489999999999999887421
Q ss_pred --hccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCC--CCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEE
Q 015230 114 --AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP--DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 189 (411)
Q Consensus 114 --~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~ 189 (411)
.+.+++.|++.+|.|+..... ..+.+.+...++++ ...++. .|.++++++++ ++++++++
T Consensus 184 ~~ll~pGD~Vlv~~P~y~~Y~~~-~~l~g~~~~~v~v~~~~~~~f~------------~d~~~l~~~~~---~~tkai~l 247 (527)
T PRK09275 184 NGLLKAGDKIALMTPIFTPYLEI-PELPRYDLEVVHINADEENEWQ------------YPDSELEKLRD---PSIKALFL 247 (527)
T ss_pred hhcCCCCCEEEEeCCChHHHHHH-HHHcCCCeEEEEeecCcccCCC------------CCHHHHHhhcC---CCCCEEEE
Confidence 246778999999999864333 33334333332222 111111 17888888665 35555554
Q ss_pred cccCCCCCccCCCHHHHHHHHHHHHH--hCCEEEEeccccccccccCcccccc-CCCcchhhhhhhcc-CCccccccccc
Q 015230 190 EPVVGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGFRLAYGGAQEYF-GVTPDLTTLGKIIG-GGLPVGAYGGR 265 (411)
Q Consensus 190 ~~~~~~~G~~~~~~~~l~~i~~l~~~--~~~~li~De~~~g~~~g~~~~~~~~-~~~~d~~~~sK~~~-~G~~~g~~~~~ 265 (411)
+..+|++|.+. +++.+++|.++|++ ++++||+||+|..|........... ....-+.||||.++ +|||+||++++
T Consensus 248 ~nP~NPTG~v~-s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 248 VNPSNPPSVAM-SDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred eCCcCCcCCCC-CHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 44445555544 35559999999965 4999999999987721111111111 12233559999998 79999999887
Q ss_pred HH-----HHHHhc-----------------------------CCCCcccccCCCCCHHHHHH-H----HHHHHHHhc--C
Q 015230 266 RD-----IMEMVA-----------------------------PAGPMYQAGTLSGNPLAMTA-G----IHTLKRLKE--P 304 (411)
Q Consensus 266 ~~-----~~~~~~-----------------------------~~~~~~~~~t~~~~~~~~a~-~----~~~l~~~~~--~ 304 (411)
++ +++.+. ........++.+.+.+.+.+ + .++++..+. +
T Consensus 327 ~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~ 406 (527)
T PRK09275 327 EDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKK 406 (527)
T ss_pred chhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHH
Confidence 75 333220 00011122345555555554 2 222321111 2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCC----CcchhcccchHHHHHHHHHH-HHcCeEec
Q 015230 305 GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY----NFEDAKKSETTKFARFYRGM-LEEGVYFA 379 (411)
Q Consensus 305 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~ 379 (411)
++++.++++.+.+.+.| ..+........++++++++...... .+........+ ..+++..| .+.||.+.
T Consensus 407 ~~~~~~~~Rr~~l~~~L-----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~-~~~f~~~Ll~e~gV~v~ 480 (527)
T PRK09275 407 AMKDIIRRRYKALYEGL-----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYS-PVDLLFRLAEETGVVLL 480 (527)
T ss_pred HHHHHHHHHHHHHHHHc-----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCC-HHHHHHHHHhcCCEEEe
Confidence 23333334333333333 1122212345678888887532110 00000000011 24455555 45599999
Q ss_pred cCC-----CcceeeecC-CCHHHHHHHHHHHHHHHHh
Q 015230 380 PSQ-----FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 380 ~~~-----~~~~~~~~~-~t~~~i~~~i~~l~~~~~~ 410 (411)
||. .+.+|++++ .+++++.++.++|.+++.+
T Consensus 481 PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~ 517 (527)
T PRK09275 481 PGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDE 517 (527)
T ss_pred CchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 984 235899887 5889999999999988764
No 207
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.7e-23 Score=193.03 Aligned_cols=310 Identities=13% Similarity=0.062 Sum_probs=188.7
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+...+++..|. +++| .++.+ ....... |+.....++.+.+++.++ .+++|++|+|+++++..+++..
T Consensus 30 ~~~~~~l~~ne--~~~~-~~~~~------~~~~~~~--Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~- 97 (354)
T PRK04635 30 GRGDIWINANE--SPFN-NEYKL------DLARLNR--YPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAF- 97 (354)
T ss_pred CCCcEEeeCCC--CCCC-CChhh------hhHHhcc--CCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHh-
Confidence 34567888775 4555 23322 1111112 332234666677777677 7899999999999999998743
Q ss_pred hccCC-cEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 114 AFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 114 ~~~~~-~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
..++ +.|++..++|.... ......|..+..++....... |.+.+++ + +++++++++.+
T Consensus 98 -~~~g~d~vlv~~P~y~~y~-~~~~~~g~~v~~v~~~~~~~~--------------~~~~l~~-~----~~~~li~i~nP 156 (354)
T PRK04635 98 -CEPGQDSIACFGPTYGMYA-ISAETFNVGVKALPLTADYQL--------------PLDYIEQ-L----DGAKLVFICNP 156 (354)
T ss_pred -cCCCCCeEEEcCCChHHHH-HHHHHcCCEEEEEecCCCCCC--------------CHHHHHh-c----cCCCEEEEeCC
Confidence 2334 67899888887532 333344554444333211111 6677652 2 24566666666
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHh-CCEEEEecccccc-ccccCcc-ccccCCCcchhhhhhhcc-CCcccccccccHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGA-QEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 268 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~-~~~li~De~~~g~-~~g~~~~-~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~ 268 (411)
+|++|.+.+ .+++.++++.. +++||+||+|..| ....... ........-+.||||+++ +|+|+||+++++++
T Consensus 157 ~NPTG~~~~----~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~ 232 (354)
T PRK04635 157 NNPTGTVID----RADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEEL 232 (354)
T ss_pred CCCCCccCC----HHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHH
Confidence 667777776 44444444442 5999999999877 2211111 111111122459999998 89999999999999
Q ss_pred HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH--hc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 269 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 269 ~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
++.+.... ..++.+.+++.++.++++.. +. ++.++.++++.+++.+.|+++ +........|.++|+.+
T Consensus 233 ~~~l~~~~-----~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~g~f~~~~~ 303 (354)
T PRK04635 233 IEILMRVI-----APYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY----GGAKVLEGNGNYVLAKF 303 (354)
T ss_pred HHHHHhhc-----CCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC----CCceECCCCCcEEEEEC
Confidence 98876321 23455666666666666421 11 223344555555666666553 32222234577888776
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----CcceeeecCCCHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
.+ ..++.+.|.++||.+..+. .+.+|+++. +.+++++++++|++-
T Consensus 304 ~~----------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~~ 352 (354)
T PRK04635 304 DD----------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRNQ 352 (354)
T ss_pred CC----------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 31 2567888999999997653 345888865 789999999999764
No 208
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=4.5e-23 Score=192.81 Aligned_cols=314 Identities=18% Similarity=0.184 Sum_probs=207.2
Q ss_pred CcHHHHHHHHH-HHHcC-C---CCCCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEE
Q 015230 53 ADDQVLAALGE-TMKKG-T---SFGAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 124 (411)
Q Consensus 53 ~~~~v~~a~~~-~l~~~-~---~~~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~ 124 (411)
.+|.++.++.. ..... . ...+..++++.+++++...++ ..+++++++|+++++..++..+ ...+++|++.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~--~~~g~~vl~~ 89 (350)
T cd00609 12 PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL--LNPGDEVLVP 89 (350)
T ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh--CCCCCEEEEc
Confidence 56666666654 11111 1 122346777888888877753 4778999999999999988853 2346778888
Q ss_pred eCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHH
Q 015230 125 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 204 (411)
Q Consensus 125 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~ 204 (411)
.++|++. ..++...+..+..++........ .+.+.++... .++++++++++.++++|.+.+ .+
T Consensus 90 ~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~~~~---~~~~~~v~i~~~~~~tG~~~~-~~ 152 (350)
T cd00609 90 DPTYPGY-EAAARLAGAEVVPVPLDEEGGFL------------LDLELLEAAK---TPKTKLLYLNNPNNPTGAVLS-EE 152 (350)
T ss_pred CCCchhH-HHHHHHCCCEEEEEecccccCCc------------cCHHHHHhhc---CccceEEEEECCCCCCCcccC-HH
Confidence 7777754 34444444433333322111110 0113444332 257888889888888887765 55
Q ss_pred HHHHHHHHHHHhCCEEEEecccccc-ccccC----ccccccCCCcchhhhhhhcc-CCcccccccccH-HHHHHhcCCCC
Q 015230 205 FLNAIRRITKENGALLIFDEVMTGF-RLAYG----GAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAGP 277 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li~De~~~g~-~~g~~----~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~-~~~~~~~~~~~ 277 (411)
.+++|.++|+++|+++|+||+|+++ ..+.. ...+..+....+.|++|+++ +|+++|++++++ ++.+.+...
T Consensus 153 ~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~-- 230 (350)
T cd00609 153 ELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKL-- 230 (350)
T ss_pred HHHHHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHH--
Confidence 5889999999999999999999876 43332 11222223333558999999 789999998888 788877632
Q ss_pred cccccCCCCCHHHHHHHHHHHHHHh-c-CChHHHHHHHHHHHHHHHHHHHHhcCCce-EEeeecceEEEEEecCCCCCcc
Q 015230 278 MYQAGTLSGNPLAMTAGIHTLKRLK-E-PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFE 354 (411)
Q Consensus 278 ~~~~~t~~~~~~~~a~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~ 354 (411)
....++..+..++.++..+++... . ++++++++++.+++++.|++. +... .....|.++++.+...
T Consensus 231 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~g~~~~~~~~~~------ 299 (350)
T cd00609 231 -LPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL----GPLVVVKPSGGFFLWLDLPEG------ 299 (350)
T ss_pred -HHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCccEEEEEecCCC------
Confidence 223356777888888877777552 2 556667777777777777765 3222 2345678888877432
Q ss_pred hhcccchHHHHHHHHHHHHcCeEeccC------CCcceeeecCCCHHHHHHHHHHHH
Q 015230 355 DAKKSETTKFARFYRGMLEEGVYFAPS------QFEAGFTSLAHSSDDIQHTITAAE 405 (411)
Q Consensus 355 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~~~~~~~~~~~t~~~i~~~i~~l~ 405 (411)
...+.+.+.|.++||.+.++ ....+|+.+...++++++++++|+
T Consensus 300 -------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 300 -------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred -------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 22356778888889999987 345688865555999999999886
No 209
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=3.6e-22 Score=189.75 Aligned_cols=327 Identities=14% Similarity=0.157 Sum_probs=208.5
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCC--CC-------CHHHHHHHHHHHhhCC-C-CCEEEEeCChHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--AP-------CLLENVLAEMVISAVP-S-IEMVRFVNSGTE 103 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~--~~-------~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~ 103 (411)
+..|+|..+. |..++.+++++.+.++...... .. .+..+++.+.+++.++ . +++|++|+|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 3456774443 3467889999988876421111 11 2334667788888887 3 689999999999
Q ss_pred HHHHHHHHHH--hccCCcEEEEEeCCcCCCchhh---hhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHH
Q 015230 104 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 178 (411)
Q Consensus 104 a~~~al~~~~--~~~~~~~vi~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 178 (411)
++..++.... ...++++|++.++.|++..... ....|..+..++.... +.. |++++++.++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~-------------~~~~l~~~i~ 155 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLP-------------DIRQLPELLT 155 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCc-------------CHHHHHHHhc
Confidence 9999987432 1345678999888888643322 2233444444332211 111 7899998886
Q ss_pred cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccCC
Q 015230 179 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGG 256 (411)
Q Consensus 179 ~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~G 256 (411)
++++++++..+++++|.+.+ +++|.++|++||+++++|++|+.... ..+.....+|+.++| |.++.
T Consensus 156 ---~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 156 ---PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred ---cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCCCEEEEecccccCC-
Confidence 35678888888888999988 99999999999999999999962111 111122345766666 97763
Q ss_pred cccccccccHHHHHHhcCCCCcc------------------cccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHH
Q 015230 257 LPVGAYGGRRDIMEMVAPAGPMY------------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITG 315 (411)
Q Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~------------------~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~ 315 (411)
..+|+++.++++++.+.+..... ..-.-+.+..+..+..++++.+.+ ++..++.+++.+
T Consensus 224 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~ 303 (398)
T TIGR03392 224 TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLAD 303 (398)
T ss_pred CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 12899999998887765321000 000114455566677777776654 344455555555
Q ss_pred HHHHHHHHHHHhcCCc-eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----------
Q 015230 316 ELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------- 383 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----------- 383 (411)
++++.|+++ +.. ......+.++.+.+.+ ...+.+.+.|.++||.++++..
T Consensus 304 ~l~~~l~~l----~g~~~~~~~~~~i~~~~~~~--------------~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~ 365 (398)
T TIGR03392 304 LAEERLAQL----PGFRSFRCPGSSLLAFDFAG--------------VHHSDLAALLAESGIALRAGQHCAQPLMAALGV 365 (398)
T ss_pred HHHHHHhcC----CCeEEeCCCCCcEEEEEeCC--------------cCHHHHHHHHHhCCEEEecCccchHHHHHHhCC
Confidence 555555543 322 1112234466665522 1125788889999999987642
Q ss_pred -cceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 384 -EAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 384 -~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
..+|+ ...+|++|++++++.|+++++.+
T Consensus 366 ~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 366 SGTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 34777 45789999999999999988653
No 210
>PLN02397 aspartate transaminase
Probab=99.91 E-value=8e-23 Score=194.57 Aligned_cols=336 Identities=16% Similarity=0.094 Sum_probs=195.1
Q ss_pred CEEEeccCCccccccCCC--cHHHHHHHHHHHHcCC--CC---CCCCHHHHHHHHHHHhhCCC---CCEEE--EeCChHH
Q 015230 36 NEYIDYVGSWGPAIIGHA--DDQVLAALGETMKKGT--SF---GAPCLLENVLAEMVISAVPS---IEMVR--FVNSGTE 103 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~--~~~v~~a~~~~l~~~~--~~---~~~~~~~~~l~~~l~~~~~~---~~~v~--~~~~g~~ 103 (411)
...+++..+...++.++. -+.+.++....+.... .| .+..++++.+++++...... .++|. .+.+|+.
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~G 127 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTG 127 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchH
Confidence 456777777322332221 1234444333332221 23 23468888888888655421 23342 2344444
Q ss_pred HHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-C-CCCCCCCCCCCceeecCCCCHHHHHHHHHcCC
Q 015230 104 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P-DSPGVPKGATYETLTAPFNDVSALENLFENNK 181 (411)
Q Consensus 104 a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 181 (411)
+...++.+...+.+++.|++.+|+|... .......|..+..++. + ...+. |++.+++.++...
T Consensus 128 a~~l~~~~~~~~~pGd~Vlv~~P~y~~y-~~~~~~~g~~~~~v~l~~~~~~~~--------------d~~~l~~~l~~~~ 192 (423)
T PLN02397 128 SLRLGAEFLARFYPGSTIYIPNPTWGNH-HNIFRDAGVPVRTYRYYDPKTRGL--------------DFDGLLEDLKAAP 192 (423)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhH-HHHHHHcCCeEEEeecccCcCCcc--------------CHHHHHHHHHhCC
Confidence 4443333332344678899999999865 4444455554444333 1 11111 7888888877543
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc---cCcccccc---C-CCcchhhhhhhc
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA---YGGAQEYF---G-VTPDLTTLGKII 253 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g---~~~~~~~~---~-~~~d~~~~sK~~ 253 (411)
.++++++++..+|++|...+ .+.+++|.++|++||++||+||+|.+| ..+ .......+ + ...-+.||||.+
T Consensus 193 ~~~~~i~~~~P~NPTG~v~s-~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~ 271 (423)
T PLN02397 193 DGSFVLLHACAHNPTGVDPT-PEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNM 271 (423)
T ss_pred CCCEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccC
Confidence 35566666655666666554 555999999999999999999999988 422 11111111 1 112244899999
Q ss_pred c-CCccccccc---ccHHHHHHhcCC-CCcccccCCCCCHHHHHHHHHHHHHH-------h-cCChHHHHHHHHHHHHHH
Q 015230 254 G-GGLPVGAYG---GRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRL-------K-EPGTYEYLNKITGELTQG 320 (411)
Q Consensus 254 ~-~G~~~g~~~---~~~~~~~~~~~~-~~~~~~~t~~~~~~~~a~~~~~l~~~-------~-~~~~~~~~~~~~~~~~~~ 320 (411)
+ +|||+||++ .++++++.+... .........+.+.+++.++.++++.- + -+++++.++++.+.+.+.
T Consensus 272 ~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~ 351 (423)
T PLN02397 272 GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDA 351 (423)
T ss_pred CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 799999984 355544432210 01111112344566777766665321 1 034556777777777777
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCCCcceeeecC-CCHHHHH
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQFEAGFTSLA-HSSDDIQ 398 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~~~~~~~~~-~t~~~i~ 398 (411)
|+++....++....+..|+++|+++. .++++.| .+.||.+.+++ |++++ .+.+.++
T Consensus 352 L~~~~~~~~~~~~~p~gg~fl~~~l~------------------~~~~~~Ll~~~~V~v~~~~----Ri~~~~~~~~~i~ 409 (423)
T PLN02397 352 LEARGSPGDWSHITKQIGMFSFTGLN------------------KEQVDRMTKEYHIYMTRDG----RISMAGLSSKNVP 409 (423)
T ss_pred HHhcCCCCCCCcccCCceEEEecCCC------------------HHHHHHHHHhCCEEECCCC----eEEEeeCCHHHHH
Confidence 77762111122223556888888662 2355666 45599998543 88775 8999999
Q ss_pred HHHHHHHHHHH
Q 015230 399 HTITAAEKVLR 409 (411)
Q Consensus 399 ~~i~~l~~~~~ 409 (411)
+++++|.+++.
T Consensus 410 ~~~~~i~~~~~ 420 (423)
T PLN02397 410 YLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHh
Confidence 99999999874
No 211
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=9.2e-23 Score=194.04 Aligned_cols=321 Identities=13% Similarity=0.104 Sum_probs=199.7
Q ss_pred CCccccccCCCcHHHHHHHHHHHHcC-CCCC--------CCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 43 GSWGPAIIGHADDQVLAALGETMKKG-TSFG--------APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 43 ~~~~~~~~g~~~~~v~~a~~~~l~~~-~~~~--------~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
++.+....||++|+++.++.... .. ..+. +..++++++++++++.++ +.+.++++++|+++.+.++.++
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~ 101 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAA 101 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHH
Confidence 44555678998888887766655 21 1222 234577899999999987 4557888887777777776655
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcC----CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAG----SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 188 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi 188 (411)
+...++++.|+...++|+.+...+...+ ..+..++.... + ..|++++++.+. +++++|+
T Consensus 102 ~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~-~-------------~~d~~~l~~~i~---~~t~~vi 164 (398)
T cd00613 102 IRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG-G-------------TVDLEALKEEVS---EEVAALM 164 (398)
T ss_pred HhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-C-------------CcCHHHHHHhcC---CCeEEEE
Confidence 4333233444556667777766666655 22222221110 0 017888888875 4688888
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcch--hhhhhhcc----CCccccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL--TTLGKIIG----GGLPVGA 261 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~--~~~sK~~~----~G~~~g~ 261 (411)
+++++ ++|.+.+ ++++|.++|++||+++|+|++|+.. .... ...+ .+|+ .+++|++. ||+++|+
T Consensus 165 v~~~~-~~G~~~~---~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~K~~~p~g~Ggp~~g~ 235 (398)
T cd00613 165 VQYPN-TLGVFED---LIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQKTGVPHGGGGPGAGF 235 (398)
T ss_pred EECCC-CCceecc---hHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeeccccCCCCCCCCCceeE
Confidence 88865 5677743 3699999999999999999998622 1111 1122 3454 47889873 3577899
Q ss_pred ccccHHHHHHhcCCCC--------------------------cccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHH
Q 015230 262 YGGRRDIMEMVAPAGP--------------------------MYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNK 312 (411)
Q Consensus 262 ~~~~~~~~~~~~~~~~--------------------------~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~ 312 (411)
++.++++++.+..... ....++++.+++.++++..+++.+.+ +++++++++
T Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~ 315 (398)
T cd00613 236 FAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHL 315 (398)
T ss_pred EEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 9998888876532100 00122345556666666666665543 456688888
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC---CCcceee-
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFT- 388 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---~~~~~~~- 388 (411)
+.++++++|+++..... . .......+++.+... ...+..++++.|.++||++... ....+|+
T Consensus 316 ~~~~l~~~L~~~~~~~~-~--~~~~~~~v~~~~~~~-----------~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis 381 (398)
T cd00613 316 NANYLAKRLKEVGGVLP-F--NGPFFHEFVLRLPPL-----------YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIE 381 (398)
T ss_pred HHHHHHHHHHhcCCccc-C--CCCeeEEEEEEcCCc-----------chHHHHHHHHhhhhcCccccccccCCCCeEEEE
Confidence 88999988887632110 0 011112234443210 0234578999999999988663 3345666
Q ss_pred -ecCCCHHHHHHHHHHH
Q 015230 389 -SLAHSSDDIQHTITAA 404 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l 404 (411)
+..+|++|+|+++++|
T Consensus 382 ~~~~~t~edid~~~~~L 398 (398)
T cd00613 382 PTETETKEELDALLEAL 398 (398)
T ss_pred cCCCCCHHHHHHHHHhC
Confidence 6888999999999864
No 212
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=8.4e-23 Score=190.07 Aligned_cols=320 Identities=18% Similarity=0.143 Sum_probs=201.2
Q ss_pred eccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 015230 40 DYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 119 (411)
Q Consensus 40 d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~ 119 (411)
||.|. +++| .+|.+++++.+.+.... ..++....+++.+++++.++ .+++++++||++++..+++.. ..+++
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~~~~l--~~~gd 72 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD-VYGEDPTTAKLEARAAELFG-KEAALFVPSGTAANQLALAAH--TQPGG 72 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc-ccCCCHHHHHHHHHHHHHhC-CCeEEEecCchHHHHHHHHHh--cCCCC
Confidence 67777 8888 88899999988664322 22356778899999999987 778999999999999888753 34556
Q ss_pred EEEEEeCCcCCCchh--hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC----CcEEEEEEcccC
Q 015230 120 RIIKFEGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVV 193 (411)
Q Consensus 120 ~vi~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~----~~~~~vi~~~~~ 193 (411)
.|++.+++|...... .....|..+..++... +. .|++++++++++.. .+++++++++++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~-------------~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~ 137 (338)
T cd06502 73 SVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GK-------------LTPEDLEAAIRPRDDIHFPPPSLVSLENTT 137 (338)
T ss_pred eEEEecCcceeeecCCcHHHHcCceEEeecCCC--Cc-------------CCHHHHHHHhhccCCCcCCcceEEEEEeec
Confidence 777666655433322 1222344433332211 11 18999999987421 245666666555
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc---ccccCccccccCCCcc--hhhhhhhccCCcccccc-cccHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPD--LTTLGKIIGGGLPVGAY-GGRRD 267 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~---~~g~~~~~~~~~~~~d--~~~~sK~~~~G~~~g~~-~~~~~ 267 (411)
+.||.+ +.+.+++|.++|++||+++|+||+|..+ ..|. ........+| +.++||+++. +.|++ +++++
T Consensus 138 n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~~~~ 211 (338)
T cd06502 138 EGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVGNRD 211 (338)
T ss_pred CCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEECCHH
Confidence 555544 4445999999999999999999998522 1222 1111212334 3489999974 33554 57888
Q ss_pred HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEec
Q 015230 268 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 347 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 347 (411)
+++.+..... ..+.+++.++++++++.++++.-...+..+++.++.+++.+.|+++ +... ....+.++.+.+..
T Consensus 212 ~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~-~~~~~~~~~v~~~~ 285 (338)
T cd06502 212 FIARARRRRK-QAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL----GGLE-SEVQTNIVLLDPVE 285 (338)
T ss_pred HHHHHHHHHH-HhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc----CCCc-ccccCCeEEEecCC
Confidence 8887763211 1123455566777777776653111345567777778888888775 3211 12235555554421
Q ss_pred CCCCCcchhcccchHHHHHHHHHHH---HcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHH
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGML---EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
......++.+.+. ++|+++.+.+.+.+|+ ++.+|+++++++++++++
T Consensus 286 ------------~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 286 ------------ANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ------------ccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 1112234444443 6899998876567777 567799999999999875
No 213
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.91 E-value=3.4e-23 Score=197.66 Aligned_cols=345 Identities=14% Similarity=0.105 Sum_probs=185.3
Q ss_pred ccccccCCCcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHH-HHHhhCC----CCC--EEEEeCChHHHHHHHHHHHH-
Q 015230 45 WGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAE-MVISAVP----SIE--MVRFVNSGTEACMGVLRLAR- 113 (411)
Q Consensus 45 ~~~~~~g~~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~-~l~~~~~----~~~--~v~~~~~g~~a~~~al~~~~- 113 (411)
++....++.+++++.++.+.+.. ..|+ +....++++++ ++.+... ..+ +|++|+|+++|+..++..+.
T Consensus 99 l~~g~p~~~~~~~~~~~~~~~~~-~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~ 177 (521)
T TIGR03801 99 YVIDQLGFDPDAFLYEMCDGIIG-DNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKA 177 (521)
T ss_pred hcCCCCCCCCCHHHHHHHHHhhc-CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhH
Confidence 33344566666777777777532 2332 22445555554 4444432 233 89999999999999886421
Q ss_pred --hccCCcEEEEEeCCcCCCchhhhhhcC--CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE-
Q 015230 114 --AFTGRERIIKFEGCYHGHADPFLVKAG--SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII- 188 (411)
Q Consensus 114 --~~~~~~~vi~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi- 188 (411)
.+.+++.|++.+|+|...... ....+ ..+..++.....+ .+...+.. |.++++++++ .++++++
T Consensus 178 ~~ll~pGD~Vlv~~P~y~~y~~~-~~l~~~g~~vv~i~~~~~~~----~g~~~~~~---d~~~l~~~~~---~~~kai~l 246 (521)
T TIGR03801 178 NELLKKGDKIALMTPIFTPYLEI-PELPRYDFEVVRIKADEMTE----DGTHTWQY---PDKELEKLRD---PSIKALFV 246 (521)
T ss_pred hhcCCCCCEEEEeCCCcHHHHHH-HHHhcCCcEEEEeecccccc----cccccCCC---CHHHHHHhcC---CCCcEEEE
Confidence 245678899999999864333 33332 3333322211110 00000001 7788887654 3455555
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEeccccccccccCcccccc-CCCcchhhhhhhcc-CCcccccccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRLAYGGAQEYF-GVTPDLTTLGKIIG-GGLPVGAYGG 264 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~--~~~li~De~~~g~~~g~~~~~~~~-~~~~d~~~~sK~~~-~G~~~g~~~~ 264 (411)
++|. |++|.+.+ ++.+++|.++|++| +++||+||+|..|........... ....-+.||||.++ +|||+||+++
T Consensus 247 ~nP~-NPTG~vls-~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~ 324 (521)
T TIGR03801 247 VNPS-NPPSVAMS-DESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIAL 324 (521)
T ss_pred eCCC-CCCCCCCC-HHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhhhc
Confidence 5665 44554444 44499999999987 999999999987721111111111 11223458999998 7999999988
Q ss_pred cHH-----HHH--------HhcCC---------------------CCcccccCCCCCHHHHH-----HHHHHHHHHhc--
Q 015230 265 RRD-----IME--------MVAPA---------------------GPMYQAGTLSGNPLAMT-----AGIHTLKRLKE-- 303 (411)
Q Consensus 265 ~~~-----~~~--------~~~~~---------------------~~~~~~~t~~~~~~~~a-----~~~~~l~~~~~-- 303 (411)
+++ +++ .+... ......++.+.+.+.+. ++.++++....
T Consensus 325 ~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~ 404 (521)
T TIGR03801 325 HKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYK 404 (521)
T ss_pred CchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHH
Confidence 754 221 11100 00111223334444443 22333321110
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcCCc--eEEeeecceEEEEEecCCCC----CcchhcccchHHHHHHHHHHHHcCeE
Q 015230 304 PGTYEYLNKITGELTQGIIDAGKKAGHA--ICGGYISGMFGFFFTEGPVY----NFEDAKKSETTKFARFYRGMLEEGVY 377 (411)
Q Consensus 304 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~Gi~ 377 (411)
++.++.++++.+.+.+.| +.. ......|+++++++...... .|..-........+.+.+.+.+.||.
T Consensus 405 ~~~~~~~~~R~~~l~~~L-------g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~ 477 (521)
T TIGR03801 405 AETKDICRRREKLLFRGL-------GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIV 477 (521)
T ss_pred HHHHHHHHHHHHHHHHhc-------CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEE
Confidence 222233333333333333 322 12345678899988532110 00000000001223344444566999
Q ss_pred eccCC-----CcceeeecC-CCHHHHHHHHHHHHHHHHh
Q 015230 378 FAPSQ-----FEAGFTSLA-HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 378 v~~~~-----~~~~~~~~~-~t~~~i~~~i~~l~~~~~~ 410 (411)
+.||. .+.+|++++ .+++++.++.++|++++.+
T Consensus 478 v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~ 516 (521)
T TIGR03801 478 LLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDE 516 (521)
T ss_pred EeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99983 234899887 6899999999999988764
No 214
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.91 E-value=6.3e-22 Score=188.21 Aligned_cols=326 Identities=15% Similarity=0.156 Sum_probs=210.1
Q ss_pred CCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CC-------CCHHHHHHHHHHHhhCC--CCCEEEEeCChHH
Q 015230 35 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GA-------PCLLENVLAEMVISAVP--SIEMVRFVNSGTE 103 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~-------~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~ 103 (411)
+..|+|-.+. |..++.+.+++.+.++..... .+ ..+..+++.+.+++.++ .+++|++++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 3466774443 346778999998888763211 11 13345677788888887 4689999999999
Q ss_pred HHHHHHHHHH--hccCCcEEEEEeCCcCCCchhhh---hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHH
Q 015230 104 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 178 (411)
Q Consensus 104 a~~~al~~~~--~~~~~~~vi~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~ 178 (411)
++..+++... ...++++|++.++.|++...... ...|..+..++... .+. .|++++++.++
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~-------------~d~~~l~~~i~ 158 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DRL-------------PDVDLLPELIT 158 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CCc-------------CCHHHHHHhcC
Confidence 9999987542 13466889999999887433322 23344444433321 111 17899998886
Q ss_pred cCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccC-
Q 015230 179 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG- 255 (411)
Q Consensus 179 ~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~- 255 (411)
++++++++..+++.+|.+.+ +++|.++|+++|+++++|++|+- |. +..+.....+|+. +++|.++.
T Consensus 159 ---~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~~---g~-~~~~~~~~~~d~~~~s~~K~~gp~ 227 (401)
T PRK10874 159 ---PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQGA---VH-FPADVQALDIDFYAFSGHKLYGPT 227 (401)
T ss_pred ---cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCccc---cc-ccCCchhcCCCEEEEecccccCCC
Confidence 35678888888888999988 99999999999999999999961 11 0111112235654 56697762
Q ss_pred CcccccccccHHHHHHhcCCCCc------------------ccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHH
Q 015230 256 GLPVGAYGGRRDIMEMVAPAGPM------------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKIT 314 (411)
Q Consensus 256 G~~~g~~~~~~~~~~~~~~~~~~------------------~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~ 314 (411)
| +|+++++++.++.+.+.... .....-+.+..+..+..++++.+.+ ++..++.++..
T Consensus 228 G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 228 G--IGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLA 305 (401)
T ss_pred c--cEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 4 68999999888876531100 0001114455566666677776554 33445555666
Q ss_pred HHHHHHHHHHHHhcCCceEE-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----------
Q 015230 315 GELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---------- 383 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---------- 383 (411)
+++++.|+++ +..... ...+.++.+.+.+. ...++.+.|.++||.+.++..
T Consensus 306 ~~l~~~l~~~----~g~~~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g 367 (401)
T PRK10874 306 TLAEDALAKL----PGFRSFRCQDSSLLAFDFAGV--------------HHSDLVTLLAEYGIALRAGQHCAQPLLAALG 367 (401)
T ss_pred HHHHHHHhcC----CCEEEeCCCCCcEEEEEECCc--------------CHHHHHHHHHHCCcEEeccccchHHHHHHhC
Confidence 6666666543 322111 23345666655321 125788889999999988642
Q ss_pred --cceeee--cCCCHHHHHHHHHHHHHHHHhC
Q 015230 384 --EAGFTS--LAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 384 --~~~~~~--~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
..+|++ ..+|++|++++++.|+++++.+
T Consensus 368 ~~~~iRiS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 368 VTGTLRASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred CCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence 347774 5669999999999999988753
No 215
>PRK10534 L-threonine aldolase; Provisional
Probab=99.91 E-value=7.9e-23 Score=189.60 Aligned_cols=319 Identities=17% Similarity=0.139 Sum_probs=193.7
Q ss_pred EEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccC
Q 015230 38 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 117 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~ 117 (411)
.+||.++ .+.+ .+|.+++++.+.+.....| ++.....++.+.+++.++ .+.+++++||++++..++... ..+
T Consensus 1 ~~~~~~~---~~~~-p~~~~~~a~~~~~~~~~~Y-~~~~~~~~L~~~la~~~g-~~~~~v~~~g~~a~~~~l~~~--~~~ 72 (333)
T PRK10534 1 MIDLRSD---TVTR-PSRAMLEAMMAAPVGDDVY-GDDPTVNALQDYAAELSG-KEAALFLPTGTQANLVALLSH--CER 72 (333)
T ss_pred Ccccccc---cCCC-CCHHHHHHHHhccCCCccc-CCCHHHHHHHHHHHHHhC-CCeEEEeCchHHHHHHHHHHh--cCC
Confidence 3789998 5566 8899999987755443222 266777888888888884 455678888999988877642 345
Q ss_pred CcEEEEEeCCcCCCchhh-hhhcC-CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC---CcEEEEEEccc
Q 015230 118 RERIIKFEGCYHGHADPF-LVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPV 192 (411)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~---~~~~~vi~~~~ 192 (411)
++.|++..++|...+... ....+ .....++.. ..+ ..|+++++++++.+. .++++++++.+
T Consensus 73 gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------------~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 73 GEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADG------------TLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred CCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCC------------CCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 567776655553222211 11111 111111111 111 117899988885310 13556666532
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc---ccCccccccCCCc-chhhhhhhccCCcccc-cccccH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL---AYGGAQEYFGVTP-DLTTLGKIIGGGLPVG-AYGGRR 266 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~---g~~~~~~~~~~~~-d~~~~sK~~~~G~~~g-~~~~~~ 266 (411)
++|.+.+ .+.+++|.++|++|+++|++||+|. | .. +... .......+ -+++|||+++. ++| |+++++
T Consensus 139 --~~G~v~~-~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~-~~~~~~~~~~~~s~SK~~~~--~~G~~~~~~~ 211 (333)
T PRK10534 139 --HNGKVLP-REYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL-KEITQYCDSFTICLSKGLGT--PVGSLLVGNR 211 (333)
T ss_pred --CCCeecC-HHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH-HHHHhcCCEEEEEeEcCCCC--cccceEEcCH
Confidence 2476665 3448999999999999999999986 3 21 2111 11111111 24589998874 588 577899
Q ss_pred HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 267 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 267 ~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
++++.+....... +..+..+.++++++.++++.. .+.+++.++..+++.+.|+++ ++... ...++++++.+.
T Consensus 212 ~~i~~~~~~~~~~-~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~~~~-~~~~nfv~~~~~ 283 (333)
T PRK10534 212 DYIKRARRWRKMT-GGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GADVM-RQDTNMLFVRVG 283 (333)
T ss_pred HHHHHHHHHHHHh-CCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CCccC-CCCceEEEEECC
Confidence 9988886322111 112223345566666665432 122333444556777777765 33222 235788888763
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~~ 409 (411)
. ....++.+.|+++||++.++. .+|+ .+.+|++++++++++|++.+.
T Consensus 284 ~--------------~~~~~~~~~l~~~gi~v~~~~--~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 284 E--------------EQAAALGEYMRERNVLINASP--IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred c--------------hhHHHHHHHHHHcCeeecCCc--eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 1 123678899999999999874 4566 345799999999999998764
No 216
>PRK08637 hypothetical protein; Provisional
Probab=99.91 E-value=2.8e-22 Score=189.44 Aligned_cols=305 Identities=13% Similarity=0.098 Sum_probs=188.6
Q ss_pred CCCHHHHHHHHHHHhhCC--C---CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC
Q 015230 73 APCLLENVLAEMVISAVP--S---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 147 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~--~---~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (411)
+..++++.+++++.+..+ . .++|++|+|+++++..++++. ..+++.|++.+|+|+..........|.++..++
T Consensus 45 G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~ 122 (388)
T PRK08637 45 GIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF--VDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYP 122 (388)
T ss_pred CCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHhcCCEEEEec
Confidence 446777888887776442 2 257899999999999888742 345678999999887654333334565555544
Q ss_pred CC-CCCCCCCCCCCceeecCCCCHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHH-----hCCEE
Q 015230 148 LP-DSPGVPKGATYETLTAPFNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-----NGALL 220 (411)
Q Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~-----~~~~l 220 (411)
.. ...++ |++++++.++. ..+...++++...+|++|... +.+.+++|.++|++ |+++|
T Consensus 123 ~~~~~~~~--------------d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~-s~~~~~~l~~~~~~~~~~~~~~~i 187 (388)
T PRK08637 123 IFDEDGGF--------------DTDALKEALQAAYNKGKVIVILNFPNNPTGYTP-TEKEATAIVEAIKELADAGTKVVA 187 (388)
T ss_pred ccCCCCcC--------------CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCCcEEE
Confidence 42 22233 88999888872 112334444443345555443 34459999999886 99999
Q ss_pred EEecccccc-ccccCc-c--ccccCCCcc---h--hhhhhhcc-CCcccccccc------cHHHHHHhcCCC-CcccccC
Q 015230 221 IFDEVMTGF-RLAYGG-A--QEYFGVTPD---L--TTLGKIIG-GGLPVGAYGG------RRDIMEMVAPAG-PMYQAGT 283 (411)
Q Consensus 221 i~De~~~g~-~~g~~~-~--~~~~~~~~d---~--~~~sK~~~-~G~~~g~~~~------~~~~~~~~~~~~-~~~~~~t 283 (411)
|+||+|.+| ..+... . ....+.... + .++||.++ +|+|+||++. ++++++.+.... .......
T Consensus 188 I~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (388)
T PRK08637 188 VVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNI 267 (388)
T ss_pred EecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhccc
Confidence 999999988 444211 0 111121222 2 28999887 7999999974 367766664200 0011123
Q ss_pred CCCCHHHHHHHHHHHHHHhcCChHHHHHHH-------HHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchh
Q 015230 284 LSGNPLAMTAGIHTLKRLKEPGTYEYLNKI-------TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 356 (411)
Q Consensus 284 ~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 356 (411)
++.+.++++++.++++ +....++.++. .+.+.+.|++......+.......|+++|+.+..
T Consensus 268 ~~~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~--------- 335 (388)
T PRK08637 268 SNGPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG--------- 335 (388)
T ss_pred CCCCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh---------
Confidence 4567788888877764 22233333333 3333333333210001222334568888987731
Q ss_pred cccchHHHHHHHHHHH-HcCeEeccCCCcceeeecC-CCHHHHHHHHHHHHHHHHhC
Q 015230 357 KKSETTKFARFYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 357 ~~~~~~~~~~~~~~l~-~~Gi~v~~~~~~~~~~~~~-~t~~~i~~~i~~l~~~~~~~ 411 (411)
.+..++.+.|. ++||.+.+.+.+.+|+++. .+++++++++++|.++++.+
T Consensus 336 -----~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 -----VDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred -----HHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 12367888885 6799887766667999865 58999999999999998764
No 217
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.91 E-value=3e-22 Score=179.81 Aligned_cols=330 Identities=16% Similarity=0.153 Sum_probs=217.2
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCC--------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP--------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~--------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
.|+|..+. .+ .+|++++++...++...++..+ ....++..+.+++.++ .+++|+||+||||++..
T Consensus 3 iYlD~~AT---Tp---~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNl 76 (386)
T COG1104 3 IYLDNAAT---TP---VDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNL 76 (386)
T ss_pred cccccccc---CC---CCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHH
Confidence 46776666 44 6899999999999984222111 3445667777778888 67999999999999999
Q ss_pred HHHHHH-hc---cCCcEEEEEeCCcCCCchhhhhhc--CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC
Q 015230 108 VLRLAR-AF---TGRERIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 181 (411)
Q Consensus 108 al~~~~-~~---~~~~~vi~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 181 (411)
||+.+. .+ .++.++|+..-..+...+....+. |.++-+++.. ..|.. |+++|+++++
T Consensus 77 aI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~-~~G~v-------------~~e~L~~al~--- 139 (386)
T COG1104 77 AIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD-SNGLV-------------DLEQLEEALR--- 139 (386)
T ss_pred HHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC-CCCeE-------------cHHHHHHhcC---
Confidence 998632 22 245678887777776666655552 3334443332 24433 8999999998
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhh-hccCCcccc
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVG 260 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK-~~~~G~~~g 260 (411)
+++.+|.+..+||+.|+++| +++|.++|+++++++++|.+|+ .|+. ..+......|+.|||- .|+|.=.+|
T Consensus 140 ~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa---~Gki-pi~~~~~~vD~ls~SaHK~~GpkGiG 211 (386)
T COG1104 140 PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA---VGKI-PIDLEELGVDLLSFSAHKFGGPKGIG 211 (386)
T ss_pred CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh---cCce-eccccccCcceEEeehhhccCCCceE
Confidence 46899999999999999999 9999999999999999999997 4432 2333333468888874 333211288
Q ss_pred cccccHHH-HHHhcCCCCccc-ccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceE-Ee
Q 015230 261 AYGGRRDI-MEMVAPAGPMYQ-AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GG 335 (411)
Q Consensus 261 ~~~~~~~~-~~~~~~~~~~~~-~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~ 335 (411)
+++.++.. +..+..+...-. ..+-+.|..+.++..++++...+ +...++++++.+++.+.|.+......+... ..
T Consensus 212 aLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~ 291 (386)
T COG1104 212 ALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEP 291 (386)
T ss_pred EEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCccc
Confidence 88765543 121211110000 01224455666666666665443 556677777777787777765221111111 12
Q ss_pred eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc-----------------------eee--ec
Q 015230 336 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-----------------------GFT--SL 390 (411)
Q Consensus 336 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~-----------------------~~~--~~ 390 (411)
.....+.+-++. ...+.+...|..+||.++.+..+. +|+ ..
T Consensus 292 rlP~~~~~~f~g--------------v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~ 357 (386)
T COG1104 292 RLPNILNFSFPG--------------VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGR 357 (386)
T ss_pred CCCCeEEEEeCC--------------CcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCC
Confidence 233444454432 233778888888899999885443 565 45
Q ss_pred CCCHHHHHHHHHHHHHHHHhC
Q 015230 391 AHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~~ 411 (411)
.+|++|++.+++.+.++++++
T Consensus 358 ~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 358 FTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 679999999999999988763
No 218
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.91 E-value=6.4e-22 Score=186.55 Aligned_cols=315 Identities=18% Similarity=0.139 Sum_probs=200.9
Q ss_pred CCcHHHHHHHHHHHHcCCCC----CCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc--cCCcEEEEE
Q 015230 52 HADDQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TGRERIIKF 124 (411)
Q Consensus 52 ~~~~~v~~a~~~~l~~~~~~----~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~--~~~~~vi~~ 124 (411)
+.+|.+++++.+++...... .......+++.+++++.++ ..+.+++++||++++..+++.++.. .+++.|++.
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~ 110 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVP 110 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEec
Confidence 47899999999888763211 1223445788999999887 4557899999999999999866443 235678877
Q ss_pred eCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHH
Q 015230 125 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 204 (411)
Q Consensus 125 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~ 204 (411)
++++... .......|.++..++...... .|++++++.++. +++++++..+++++|.+.+
T Consensus 111 ~~~h~s~-~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~--- 169 (371)
T PRK13520 111 ESAHFSF-DKAADMLGVELRRAPLDDDYR--------------VDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP--- 169 (371)
T ss_pred CcchHHH-HHHHHHcCceEEEecCCCCCc--------------CCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC---
Confidence 7766543 222233344444433221111 189999999973 3444454445667899988
Q ss_pred HHHHHHHHHHHhCCEEEEecccccc-c-cccC---ccccccCCCcchhh--hhhhccCCccccccc-ccHHHHHHhcCCC
Q 015230 205 FLNAIRRITKENGALLIFDEVMTGF-R-LAYG---GAQEYFGVTPDLTT--LGKIIGGGLPVGAYG-GRRDIMEMVAPAG 276 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li~De~~~g~-~-~g~~---~~~~~~~~~~d~~~--~sK~~~~G~~~g~~~-~~~~~~~~~~~~~ 276 (411)
+++|.++|++||+++++|++|+++ . .... +..... ..|.++ ..|+..+|+|+|+++ .++++++.+....
T Consensus 170 -l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~ 246 (371)
T PRK13520 170 -IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDT 246 (371)
T ss_pred -HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHhhcccC
Confidence 999999999999999999999855 1 1111 111111 234433 457555678898775 4666776654222
Q ss_pred Cccccc-----CCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecC
Q 015230 277 PMYQAG-----TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 348 (411)
Q Consensus 277 ~~~~~~-----t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 348 (411)
+...+. ..+.+...++++.++++.+.. ++.+++..++.+++++.|+++ ++.........++.+.+.
T Consensus 247 ~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~~-- 320 (371)
T PRK13520 247 PYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GFEPVIEPVLNIVAFDDP-- 320 (371)
T ss_pred ccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCceEEEEecC--
Confidence 211110 012233456667777776544 356777888888888887765 322112223445555442
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-cceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..+++.+.|.++||.+.+... ..+|+ +..+|++|++++++.|++++++
T Consensus 321 --------------~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~ 371 (371)
T PRK13520 321 --------------NPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKKR 371 (371)
T ss_pred --------------CHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhhC
Confidence 136889999999999988653 34776 4568999999999999988753
No 219
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.91 E-value=1e-21 Score=184.14 Aligned_cols=318 Identities=17% Similarity=0.199 Sum_probs=206.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCC--EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~--~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~ 129 (411)
.+|.+++++........ ....+..+++.+.+++.++ ..+ .+++++||++++..++... ..+++++++..++++
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~--~~~~~~vi~~~~~~~ 85 (355)
T TIGR03301 10 TSATVRDAMLVDWCHWD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL--VPRDGKLLVLINGAY 85 (355)
T ss_pred CCHHHHHHhhhhccCCC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc--cCCCCeEEEECCCch
Confidence 56778887766322211 1123667888999999887 333 6788999999999999753 345677888887776
Q ss_pred CCc-hhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHH
Q 015230 130 GHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 208 (411)
Q Consensus 130 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~ 208 (411)
+.. .......|.++..++.+..... |++++++.+++++ +.+++++..+++.+|...+ +++
T Consensus 86 ~~~~~~~a~~~g~~~~~i~~~~~~~~--------------d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~----~~~ 146 (355)
T TIGR03301 86 GERLAKICEYLGIPHTDLNFSEYEPP--------------DLNRIEEALAADP-DITHVATVHHETTTGILNP----LEA 146 (355)
T ss_pred hhHHHHHHHHcCCceEEEecCCCCCC--------------CHHHHHHHHHhCC-CceEEEEEecCCcccchhH----HHH
Confidence 642 2233334544444333221121 8899999988542 4455555555666788888 999
Q ss_pred HHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcc---------
Q 015230 209 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY--------- 279 (411)
Q Consensus 209 i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~--------- 279 (411)
|.++|++|++++|+|++++ + .+..+.+..++.+..+.+++|+++|+..+|++++++++++.+......+
T Consensus 147 i~~l~~~~~~~livD~~~s-~-g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSS-F-GAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred HHHHHHHcCCEEEEEeccc-c-CCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHH
Confidence 9999999999999999886 2 1112223333444445689999875434799999999888765211100
Q ss_pred -----cccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceE-EeeecceEEEEEecCC
Q 015230 280 -----QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFTEGP 349 (411)
Q Consensus 280 -----~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~ 349 (411)
....++.+..++.++.++++.+.+ ++.+++++++.+++++.|+++.. ..... ....+.++++.+....
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 302 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGF--QPLLPERWQSPIIVSFLYPDDP 302 (355)
T ss_pred HhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCC--eeecCCCCCCCcEEEEECCCCC
Confidence 012346677777777778876643 34556677778888888876521 11111 1223456677663210
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCCC---cceeee--cCCCHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTS--LAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---~~~~~~--~~~t~~~i~~~i~~l~~~~ 408 (411)
..+..++.+.|.++||.+.++.. +.+|++ ..+++++++++++.|++++
T Consensus 303 -----------~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 303 -----------DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred -----------cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 12236889999999999988753 457884 4569999999999998763
No 220
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=9.8e-22 Score=184.41 Aligned_cols=302 Identities=12% Similarity=0.095 Sum_probs=185.8
Q ss_pred HHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCC
Q 015230 77 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 156 (411)
Q Consensus 77 ~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (411)
...++.+.+++.+ +.+.+++++|+++++..++... ..+++.|++..+.+++.+ ......|..+..++......+.
T Consensus 52 ~~~~~~e~lA~~~-g~~~~~i~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~~~~~~~~- 126 (370)
T TIGR02539 52 PIHDFLEDLAEFL-GMDEARVTHGAREGKFAVMHAL--CKEGDWVVLDGLAHYTSY-VAAERAGLNVKEVPHTGHPEYK- 126 (370)
T ss_pred HHHHHHHHHHHHh-CCCceEEECChHHHHHHHHHHh--hCCCCEEEECCcccHHHH-HHHHHcCCEEEEEecCCcccCC-
Confidence 4556667777777 5556778999999999988743 245566777666665544 2333444433332211000110
Q ss_pred CCCCceeecCCCCHHHHHHHHHcC----CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 157 GATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 157 ~~~~~~~~~~~~d~~~l~~~~~~~----~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
.|++++++.+++. .+++++|+++.++++.|.+.+ +++|.++|++||+++|+||+|+....+
T Consensus 127 -----------~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 127 -----------VDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -----------cCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECccccCCcC
Confidence 1899999988642 125667777777788899888 999999999999999999999721111
Q ss_pred cCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCC-----CCCHHHHHHHHHHHHHHhc--CC
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL-----SGNPLAMTAGIHTLKRLKE--PG 305 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~-----~~~~~~~a~~~~~l~~~~~--~~ 305 (411)
. ....++.+.-+.|+||++++|.|+|++++++++++.+......+..++. +....++.++.++++...+ +.
T Consensus 192 ~--~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~ 269 (370)
T TIGR02539 192 V--SAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKR 269 (370)
T ss_pred C--CHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHH
Confidence 0 1111222222458999999777899999999999988754322211111 1111244445555553222 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCce--EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeE-eccCC
Q 015230 306 TYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPSQ 382 (411)
Q Consensus 306 ~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~~ 382 (411)
. .+..++.+++++.|+++ ++.. .......++.+++...... ..++......+.+.|+++||+ +.++.
T Consensus 270 ~-~~~~~~~~~l~~~L~~~----g~~~~~~~~s~t~~v~~~~~~~~~~-----~~~~~~~~~~~~~~L~e~GI~~ir~~~ 339 (370)
T TIGR02539 270 W-DEEVKKTRWFVAELEDI----GFIQLGQKPKEHDLVKFETPGFHEI-----AQKHKRRGYFLYEELKKRGIHGIRSGQ 339 (370)
T ss_pred H-HHHHHHHHHHHHHHHhC----CcEEEccCCCcCceEEEECCchhHH-----hhhhccccHHHHHHHHhCCCccccCCc
Confidence 2 22233356777888775 3221 1123466666665311000 001112236789999999998 77765
Q ss_pred Ccceeee-cCCCHHHHHHHHHHHHHHHHh
Q 015230 383 FEAGFTS-LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 383 ~~~~~~~-~~~t~~~i~~~i~~l~~~~~~ 410 (411)
...+|++ ..+|++++++++++|++++++
T Consensus 340 ~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 340 TKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 5568886 567999999999999998875
No 221
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.90 E-value=1.3e-21 Score=184.72 Aligned_cols=330 Identities=12% Similarity=0.064 Sum_probs=205.5
Q ss_pred cccCCCcHHHHHHHHHHHHcCCCC---C-----CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 015230 48 AIIGHADDQVLAALGETMKKGTSF---G-----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 119 (411)
Q Consensus 48 ~~~g~~~~~v~~a~~~~l~~~~~~---~-----~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~ 119 (411)
.-.|..++.+++++.+........ . .......++.+.+++.+ +.+++++++|+++++..++... ..+++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~-g~~~~~~~~g~t~a~~~al~~l--~~~gd 103 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL-GMDEARVTHGAREGKFAVMHSL--CKKGD 103 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHh--cCCCC
Confidence 446668889999999887542110 1 11345678888888888 4567889999999999999753 34567
Q ss_pred EEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC----CCcEEEEEEcccCCC
Q 015230 120 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGN 195 (411)
Q Consensus 120 ~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~----~~~~~~vi~~~~~~~ 195 (411)
.|++...++.+... ++...|..+..++.....+.. .|++++++.+++. .+++++|+++.++++
T Consensus 104 ~Vlv~~~~h~s~~~-~~~~~G~~~~~v~~~~~~~~~------------~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~ 170 (387)
T PRK09331 104 YVVLDGLAHYTSYV-AAERAGLNVREVPKTGYPEYK------------ITPEAYAEKIEEVKEETGKPPALALLTHVDGN 170 (387)
T ss_pred EEEECCCchHHHHH-HHHHcCCEEEEEeCccCcCCC------------cCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence 77777666665443 334445544443321011110 1899999988753 236788888888888
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcC
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 274 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~ 274 (411)
+|.+.+ +++|.++|++||+++|+|++|+ .|. .+....++.+..+.+++|+++++.++|++++++++++.+..
T Consensus 171 tG~~~~----l~~I~~la~~~g~~livD~a~~---~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~ 243 (387)
T PRK09331 171 YGNLAD----AKKVAKVAHEYGIPFLLNGAYT---VGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR 243 (387)
T ss_pred Cccccc----HHHHHHHHHHcCCEEEEECCcc---cCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence 999988 9999999999999999999997 221 12222345555567899999977789999999998887754
Q ss_pred CCCcc-------cccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEE--eeecceEEEE
Q 015230 275 AGPMY-------QAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICG--GYISGMFGFF 344 (411)
Q Consensus 275 ~~~~~-------~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~~~~~~ 344 (411)
....+ .+.+. .+....+..++++.+.+ .+..++..++.+++++.|+++. ++.... .....++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~~~~~~~~~~~i~~~~ 318 (387)
T PRK09331 244 TSRKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIE---GFKQLGEKPRNHDLMKFE 318 (387)
T ss_pred ccCCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEeccCcCcCCeEEEe
Confidence 32211 11122 22233333444544332 2234555667777777777651 111110 1123344444
Q ss_pred EecCCCCCcchhcccchHHHHHHHHHHHHcCeEec-cCCCcceee-ecCCCHHHHHHHHHHHHHHHHh
Q 015230 345 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA-PSQFEAGFT-SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~-~~~~~~~~~-~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..... . ...........+.+.|.++||... ++....+++ ...+|++++++++++|++++++
T Consensus 319 ~~~~~--~---~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 319 TPSFD--E---IAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred CCchh--H---HhhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 32100 0 000011123578999999999953 443334555 4567999999999999998765
No 222
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.90 E-value=9.8e-22 Score=184.15 Aligned_cols=316 Identities=16% Similarity=0.133 Sum_probs=201.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~ 130 (411)
.++++.+++.+.+.. ..+....+..+++.+.+++.++ . .+.+++++||++|+..++... ..+++.|++..+++++
T Consensus 10 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~--~~~g~~vl~~~~~~~~ 86 (356)
T cd06451 10 VPPRVLKAMNRPMLG-HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL--LEPGDKVLVGVNGVFG 86 (356)
T ss_pred CCHHHHHHhCCCccC-CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh--CCCCCEEEEecCCchh
Confidence 567777777544322 1111124446788899998887 3 346789999999999988743 3456778887776665
Q ss_pred C-chhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHH
Q 015230 131 H-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 209 (411)
Q Consensus 131 ~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i 209 (411)
. ........|.++..++...... .|++++++.++. ++++++++.++++++|.+.+ +++|
T Consensus 87 ~~~~~~~~~~g~~~~~v~~~~~~~--------------~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~i 146 (356)
T cd06451 87 DRWADMAERYGADVDVVEKPWGEA--------------VSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEGI 146 (356)
T ss_pred HHHHHHHHHhCCCeEEeecCCCCC--------------CCHHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHHH
Confidence 3 2233334455444433221111 188999999874 25677777777777898888 9999
Q ss_pred HHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcC--CCCccc------
Q 015230 210 RRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQ------ 280 (411)
Q Consensus 210 ~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~--~~~~~~------ 280 (411)
.++|++||+++++|++|+ + |. ......++.+.-+.+.+|+++++..+|+++.++++++.+.. ....+.
T Consensus 147 ~~~a~~~~~~li~D~~~~-~--g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (356)
T cd06451 147 GALAKKHDALLIVDAVSS-L--GGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLL 223 (356)
T ss_pred HHHHHhcCCEEEEeeehh-c--cCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHH
Confidence 999999999999999996 2 21 11122223332244678999965568999999888877652 110000
Q ss_pred --------ccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ecceEEEEEecC
Q 015230 281 --------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEG 348 (411)
Q Consensus 281 --------~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 348 (411)
....+.++.++++..++++.+.. +++.++.+++.+++++.|+++.. .......+ .+.++++.+..
T Consensus 224 ~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~~~~~~~~~~~~~~~- 300 (356)
T cd06451 224 LKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGL--KLLAKPELRSPTVTAVLVPE- 300 (356)
T ss_pred HhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC--eeccCcccCCCceEEEECCC-
Confidence 11223455556666677766544 45667777888888888876521 11111112 23334444421
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCC----cceeee--cCCCHHHHHHHHHHHHHHHH
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTS--LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----~~~~~~--~~~t~~~i~~~i~~l~~~~~ 409 (411)
..+...+++.|.++ ||.+.++.. ..+|++ ..+|++++++++++|+++++
T Consensus 301 ------------~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 301 ------------GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ------------CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 11246889999999 999987632 347774 46899999999999998764
No 223
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.89 E-value=1e-20 Score=180.11 Aligned_cols=324 Identities=15% Similarity=0.137 Sum_probs=209.0
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCC-------CHHHHHHHHHHHhhCC--CCCEEEEeCChHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAP-------CLLENVLAEMVISAVP--SIEMVRFVNSGTEA 104 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~-------~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a 104 (411)
..|+|..+. .+ .++.+++++.+.++..... .+. .+..+++.+.+++.++ .+++|+||+|++++
T Consensus 24 ~iYld~a~~---~~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~ 97 (406)
T PRK09295 24 LAYLDSAAS---AQ---KPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEG 97 (406)
T ss_pred eEEEeCccc---cc---CCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHH
Confidence 467775554 33 6788999998888752211 111 2335677778888886 36799999999999
Q ss_pred HHHHHHHHH--hccCCcEEEEEeCCcCCCchhhhh---hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc
Q 015230 105 CMGVLRLAR--AFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179 (411)
Q Consensus 105 ~~~al~~~~--~~~~~~~vi~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 179 (411)
+..++.... ...+++.|++.+..|++....... ..|..+..++......+ |++++++.++
T Consensus 98 l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~--------------d~~~l~~~i~- 162 (406)
T PRK09295 98 INLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTL--------------QLETLPALFD- 162 (406)
T ss_pred HHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCC--------------CHHHHHHhcC-
Confidence 998886431 234567888888888765443322 23433333332211111 7899988886
Q ss_pred CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcch--hhhhhhccCCc
Q 015230 180 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGL 257 (411)
Q Consensus 180 ~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~--~~~sK~~~~G~ 257 (411)
+++++|++..+++++|.+.+ +++|.++|+++|+++++|++|+-.. .......+ .+|+ .+++|.++. -
T Consensus 163 --~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~g~--~~~~~~~~--~~D~~~~s~~K~~gp-~ 231 (406)
T PRK09295 163 --ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQAVMH--HPVDVQAL--DCDFYVFSGHKLYGP-T 231 (406)
T ss_pred --CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccccCc--cccCchhc--CCCEEEeehhhccCC-C
Confidence 35788888888888999998 9999999999999999999996111 11122222 3454 467796662 1
Q ss_pred ccccccccHHHHHHhcCCCCc-------------------ccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHH
Q 015230 258 PVGAYGGRRDIMEMVAPAGPM-------------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITG 315 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~-------------------~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~ 315 (411)
.+|++++++++++.+.+.... ....+-+.+..+..+..++++.+.+ ++..++.+++.+
T Consensus 232 G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 311 (406)
T PRK09295 232 GIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMH 311 (406)
T ss_pred CcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 279999998887765421000 0001225667777777788887654 455566777777
Q ss_pred HHHHHHHHHHHhcCCceEEe--eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----------
Q 015230 316 ELTQGIIDAGKKAGHAICGG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---------- 383 (411)
Q Consensus 316 ~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---------- 383 (411)
++++.|+++ +...... ..+.++.|.+... ....+.+.|.++||.++.+..
T Consensus 312 ~l~~~l~~~----~~~~~~~~~~~~~iv~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 312 YALSQLESV----PDLTLYGPQNRLGVIAFNLGKH--------------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHhcC----CCEEEeCCCCCceEEEEEECCc--------------CHHHHHHHHHhCCeEEeccccchHHHHHHHC
Confidence 777776654 2211111 1244555555321 124677788899999987642
Q ss_pred --cceee--ecCCCHHHHHHHHHHHHHHHH
Q 015230 384 --EAGFT--SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 384 --~~~~~--~~~~t~~~i~~~i~~l~~~~~ 409 (411)
..+|+ ....|++|+|++++.|+++..
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 23666 467899999999999998754
No 224
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.2e-20 Score=176.18 Aligned_cols=314 Identities=21% Similarity=0.201 Sum_probs=220.1
Q ss_pred CcHHHHHHHHHHHHcCC---CCCC------CCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHh-ccCCcE
Q 015230 53 ADDQVLAALGETMKKGT---SFGA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARA-FTGRER 120 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~---~~~~------~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~-~~~~~~ 120 (411)
.+..+.+++.+...+.. +.+. .++..++..+.+++.++ . .+.|+||.+.|+++..+...... ..+++.
T Consensus 34 ~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gde 113 (405)
T COG0520 34 KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDE 113 (405)
T ss_pred CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCE
Confidence 68889999998886531 1111 14456777788888887 5 58999999999999998874321 456689
Q ss_pred EEEEeCCcCCCchhhhhhcC---CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 121 IIKFEGCYHGHADPFLVKAG---SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 121 vi~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
||+.+-.+|++......+.. ..+..++.. ..+.. +.+++++.+. +++++|.+..+.|.+|
T Consensus 114 Iv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~-------------~~~~~~~~i~---~~Tklvais~vSn~tG 176 (405)
T COG0520 114 IVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLL-------------DLDALEKLIT---PKTKLVALSHVSNVTG 176 (405)
T ss_pred EEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCc-------------CHHHHHHhcC---CCceEEEEECcccccc
Confidence 99999999998877776653 334444433 22322 7888888665 6799999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccCCcccccccccHHHHHHhcCC
Q 015230 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 198 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~~~~~~~~~~~~ 275 (411)
.+.| +++|.++||++|+++++|.+|+ .+ ....+.-....|+..|| |++.|..-+|.+++++++.+.+.+.
T Consensus 177 ~~~p----v~~I~~la~~~ga~v~VDaaq~---~~-h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~ 248 (405)
T COG0520 177 TVNP----VKEIAELAHEHGALVLVDAAQA---AG-HLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPF 248 (405)
T ss_pred ccch----HHHHHHHHHHcCCEEEEECccc---cC-ccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCc
Confidence 9999 9999999999999999999996 22 12233333456766554 9777633389999999999988542
Q ss_pred CCcc---------cccCC----------CCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCc-e
Q 015230 276 GPMY---------QAGTL----------SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA-I 332 (411)
Q Consensus 276 ~~~~---------~~~t~----------~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~ 332 (411)
.... ...++ +++........++++.+++ +++.++.+++..++.++|+++ +.. .
T Consensus 249 ~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~----~~v~i 324 (405)
T COG0520 249 LGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSEL----PGVEI 324 (405)
T ss_pred ccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCeEE
Confidence 1100 00011 3333444444556665555 566777777777777777776 322 2
Q ss_pred EEe---eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc------------eee--ecCCCHH
Q 015230 333 CGG---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA------------GFT--SLAHSSD 395 (411)
Q Consensus 333 ~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~------------~~~--~~~~t~~ 395 (411)
... .++.++.|.+... ....+.+.|.++||.++.+..+. +|+ .++.|++
T Consensus 325 ~g~~~~~r~~~vsF~v~~~--------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~e 390 (405)
T COG0520 325 YGPPDADRGGIVSFNVKGI--------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEE 390 (405)
T ss_pred ecCCcccCceEEEEEeCCC--------------CHHHHHHHHHhCCeEEEeccccccHHHHhcCCCCceEEEEeecCCHH
Confidence 111 3577888877543 23789999999999999886553 565 4788999
Q ss_pred HHHHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKVLR 409 (411)
Q Consensus 396 ~i~~~i~~l~~~~~ 409 (411)
|+|++++.|+++..
T Consensus 391 did~l~~aL~~~~~ 404 (405)
T COG0520 391 DVDRLLEALKKALA 404 (405)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998753
No 225
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.89 E-value=1.2e-20 Score=177.19 Aligned_cols=319 Identities=16% Similarity=0.151 Sum_probs=203.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CC--CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~--~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~ 129 (411)
.++.+.+++.+.... ......+..+++.+.+++.++ .. +.+++|+||+++++.++..+ ..+++++++..++++
T Consensus 14 ~~~~v~~~~~~~~~~--~~~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l--~~~~~~vlv~~~~~~ 89 (363)
T TIGR02326 14 TSRTVKEAMLFDWCT--WDSDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA--VPKDGKLLVVINGAY 89 (363)
T ss_pred CCHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc--CCCCCeEEEEeCChh
Confidence 455566555443311 011224445677788888887 33 47999999999999999743 245667777777777
Q ss_pred CCc-hhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHH
Q 015230 130 GHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 208 (411)
Q Consensus 130 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~ 208 (411)
+.. .......|..+..++.+..... |++++++.++.++ +++++.+..+.+++|.+.+ +++
T Consensus 90 ~~~~~~~a~~~g~~~~~v~~~~~~~~--------------d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----i~~ 150 (363)
T TIGR02326 90 GARIVQIAEYLGIPHHVVDTGEVEPP--------------DVVEVEAILAADP-AITHIALVHCETTTGILNP----IEA 150 (363)
T ss_pred hHHHHHHHHHcCCceEEEeCCCCCCC--------------CHHHHHHHHhhCC-CccEEEEEeecCCccccCc----HHH
Confidence 653 2223334544444433322222 8999999988642 3456666666777899998 999
Q ss_pred HHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcc--------
Q 015230 209 IRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY-------- 279 (411)
Q Consensus 209 i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~-------- 279 (411)
|.++|++||+++++|++|+ + | ....+..++.+.-+.+++|+++|+..+|+++++++.++.+......+
T Consensus 151 I~~l~~~~g~~livD~~~~-~--g~~~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (363)
T TIGR02326 151 VAKLAHRHGKVTIVDAMSS-F--GGIPIDIAELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQW 227 (363)
T ss_pred HHHHHHHcCCEEEEEcccc-c--cCcccchhhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHH
Confidence 9999999999999999986 2 2 12223333333334588999976444799999988877654211100
Q ss_pred -------cccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeecceEEEEEec
Q 015230 280 -------QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTE 347 (411)
Q Consensus 280 -------~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~ 347 (411)
....++.+...+.+..++++.+.+ ++..++++++..++++.|+++.. ...... ...+.+.++.+..
T Consensus 228 ~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~--~~~~~~~~~~~~~~~~~~~~ 305 (363)
T TIGR02326 228 RCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGF--EPLLDDEIQSPIITSFYSPE 305 (363)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCC--eeccCcccCCceEEEEECCC
Confidence 012345677777777777766543 34567777888888888776521 111111 1223445565532
Q ss_pred CCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC---Ccceeee--cCCCHHHHHHHHHHHHHHHHh
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---~~~~~~~--~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.. ..+...+.+.|.++||.+.++. .+.+|++ ...+.+++++++++|++++..
T Consensus 306 ~~-----------~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~~ 362 (363)
T TIGR02326 306 DP-----------DYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMYW 362 (363)
T ss_pred CC-----------CCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhCC
Confidence 10 1123678899999999999884 2457885 456999999999999998753
No 226
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.89 E-value=5.1e-20 Score=175.10 Aligned_cols=317 Identities=14% Similarity=0.127 Sum_probs=197.3
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCCC---CCCC-----CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~---~~~~-----~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
.|+|..+. |..++.+++++.+.+..... ..+. .+..+++.+.+++.++ ..+++++++|+++++..
T Consensus 19 ~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~ 92 (397)
T TIGR01976 19 VFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTFL 92 (397)
T ss_pred EEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHH
Confidence 56664333 34788999999998875311 1121 2345788888888887 55689999999999887
Q ss_pred HHHHHHh-ccCCcEEEEEeCCcCCCchhh---hhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCc
Q 015230 108 VLRLARA-FTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 183 (411)
Q Consensus 108 al~~~~~-~~~~~~vi~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 183 (411)
++..... ..+++.|++.++.|++..... ....|..+..++.....+.. |++++++.++ ++
T Consensus 93 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~~~l~~~i~---~~ 156 (397)
T TIGR01976 93 LSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGEL-------------HPDDLASLLS---PR 156 (397)
T ss_pred HHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCc-------------CHHHHHHhcC---CC
Confidence 7654322 345678888887777654332 22345444443322111111 7889988886 35
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcch--hhhhhhccCCcccc
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDL--TTLGKIIGGGLPVG 260 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~--~~~sK~~~~G~~~g 260 (411)
+++++++.+++++|.+.+ +++|.++|++||+++++|++|+ .|. ......+ .+|+ .+++|+++ .|+|
T Consensus 157 ~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~---~~~~~~~~~~~--~~d~~~~s~~K~~g--~~~G 225 (397)
T TIGR01976 157 TRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY---APHGLIDVQAT--GADFLTCSAYKFFG--PHMG 225 (397)
T ss_pred ceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh---ccccCCCHHHc--CCCEEEEechhhcC--CceE
Confidence 788888888888999888 9999999999999999999995 121 1112222 3454 47899985 4799
Q ss_pred cccccHHHHHHhcCCCCccccc-------CCCCCHHHHHHHHHHHHHHhcC-----------------ChHHHHHHHHHH
Q 015230 261 AYGGRRDIMEMVAPAGPMYQAG-------TLSGNPLAMTAGIHTLKRLKEP-----------------GTYEYLNKITGE 316 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~-------t~~~~~~~~a~~~~~l~~~~~~-----------------~~~~~~~~~~~~ 316 (411)
++++++++++.+.+....+... ..+.+....++..++++.+.+. +..++..+..++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999888776432211111 1133444555555666655331 112333444444
Q ss_pred HHHHHHHHHHhcCCceEE-----eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC---------
Q 015230 317 LTQGIIDAGKKAGHAICG-----GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------- 382 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------- 382 (411)
+++.|+++ +..... ...+.++.+.+.. .....+.+.|.++||.+..+.
T Consensus 306 l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~ 367 (397)
T TIGR01976 306 LLVGLSDL----PGVTLYGVARLAARVPTVSFTVHG--------------LPPQRVVRRLADQGIDAWAGHFYAVRLLRR 367 (397)
T ss_pred HHHHHhcC----CCEEEeCCCCccCCCceEEEEeCC--------------cCHHHHHHHHHHCCeEEEeCccchHHHHHH
Confidence 44544443 311111 1134555555421 113578999999999998651
Q ss_pred ------Ccceee--ecCCCHHHHHHHHHHH
Q 015230 383 ------FEAGFT--SLAHSSDDIQHTITAA 404 (411)
Q Consensus 383 ------~~~~~~--~~~~t~~~i~~~i~~l 404 (411)
...+|+ ...+|++|++++++.|
T Consensus 368 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 368 LGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred hCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 124776 4678999999999864
No 227
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.89 E-value=3.3e-20 Score=176.69 Aligned_cols=317 Identities=16% Similarity=0.154 Sum_probs=202.6
Q ss_pred cCCCcHHHHHHHHHHHHcCCC--CCCC-------CHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHH--hcc
Q 015230 50 IGHADDQVLAALGETMKKGTS--FGAP-------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR--AFT 116 (411)
Q Consensus 50 ~g~~~~~v~~a~~~~l~~~~~--~~~~-------~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~--~~~ 116 (411)
.|..++.+.+++.+.++.... .... .+..+++.+.+++.++ . ++++++++|+++++..++.... ...
T Consensus 27 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~ 106 (403)
T TIGR01979 27 TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLK 106 (403)
T ss_pred ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCC
Confidence 344678899999888765321 1111 1234577777888887 4 5799999999999988886431 134
Q ss_pred CCcEEEEEeCCcCCCchhhh---hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 117 GRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
+++.|++.++.|++...... ...|..+..++.. ..+.. |++++++.++ ++++++++..++
T Consensus 107 ~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~-~~~~~-------------~~~~l~~~i~---~~~~lv~~~~~~ 169 (403)
T TIGR01979 107 AGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD-DDGTL-------------DLDDLEKLLT---EKTKLVAITHVS 169 (403)
T ss_pred CCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-CCCCC-------------CHHHHHHHhc---cCCeEEEEEccc
Confidence 56778888887776443222 2334444443322 11111 7889988886 367788888888
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcch--hhhhhhccCCcccccccccHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDIME 270 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~--~~~sK~~~~G~~~g~~~~~~~~~~ 270 (411)
+.+|.+.+ +++|.++|++||+++++|++|+ .|. ......+ .+|+ .+++|.++. ..+|++++++++++
T Consensus 170 ~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~---~g~~~~~~~~~--~~d~~~~s~~K~~gp-~G~g~l~~~~~~~~ 239 (403)
T TIGR01979 170 NVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA---VPHMPVDVQAL--DCDFYVFSGHKMYGP-TGIGVLYGKEELLE 239 (403)
T ss_pred ccccccCC----HHHHHHHHHHcCCEEEEEchhh---cCccccCcccc--CCCEEEEecccccCC-CCceEEEEchHHHh
Confidence 88999999 9999999999999999999996 121 1112222 3454 478898762 12888888888877
Q ss_pred HhcCCCCc------------------ccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcC
Q 015230 271 MVAPAGPM------------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG 329 (411)
Q Consensus 271 ~~~~~~~~------------------~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (411)
.+.+.... .....-+.+..+..+..++++.+.+ ++..++..+..+++++.|+++ +
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~----~ 315 (403)
T TIGR01979 240 QMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEI----P 315 (403)
T ss_pred cCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----C
Confidence 66421100 0000113455566666677776544 455666667777776666654 2
Q ss_pred CceEEe-----eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC------------Ccceeee--c
Q 015230 330 HAICGG-----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFTS--L 390 (411)
Q Consensus 330 ~~~~~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~------------~~~~~~~--~ 390 (411)
...... ..+.++.+.+.+. ...++.+.|.++||.+.++. ...+|++ .
T Consensus 316 g~~~~~~~~~~~~~~~v~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~~ 381 (403)
T TIGR01979 316 GLRIYGPRDAEDRGGIISFNVEGV--------------HPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVPATCRASFYI 381 (403)
T ss_pred CEEEeCCCCccccCceEEEEeCCc--------------CHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCCCEEEEEecc
Confidence 221111 2356767766321 12567889999999998653 2346774 5
Q ss_pred CCCHHHHHHHHHHHHHHHHhC
Q 015230 391 AHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~~ 411 (411)
.+|++|+++++++|+++++.+
T Consensus 382 ~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 382 YNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 679999999999999988754
No 228
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=3.6e-20 Score=176.59 Aligned_cols=354 Identities=13% Similarity=0.063 Sum_probs=202.7
Q ss_pred CCCEEEeccCCccccc-cCC-CcH---HHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAI-IGH-ADD---QVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 107 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~-~g~-~~~---~v~~a~~~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~ 107 (411)
.|..++++.++ .+ ..+ .++ .+.+++.+++..+. .|+ ...-..++.+.+++.+ +.+++++|+||++|+..
T Consensus 34 ~g~~~~~L~~g---~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~-~~~g~~~Lreaia~~~-~~~~vv~t~ggt~A~~~ 108 (460)
T PRK13238 34 AGYNPFLLKSE---DVFIDLLTDSGTGAMSDRQWAAMMRGDEAYA-GSRSYYRLEDAVKDIF-GYPYTIPTHQGRAAEQI 108 (460)
T ss_pred cCCCEEeCCCC---CCCCCCCCCCCchhhhHHHHHHHHhCCcccC-CCCCHHHHHHHHHHHh-CCCcEEECCCHHHHHHH
Confidence 46677777776 44 244 222 47888888886643 232 2222344444454444 56789999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-CcEEE
Q 015230 108 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAA 186 (411)
Q Consensus 108 al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~ 186 (411)
+++.. ..+++ |++.++.|. .+.......|..+..++........ ....+... -|++++++.+.... +++++
T Consensus 109 ~~~al--l~pGD-Vii~~p~~~-~~~~~i~~~G~~~v~v~~~~~~~~~---~~~~f~g~-id~e~Le~~i~~~~~~~tk~ 180 (460)
T PRK13238 109 LFPVL--IKKGD-VVPSNYHFD-TTRAHIELNGATAVDLVIDEALDTG---SRHPFKGN-FDLEKLEALIEEVGAENVPF 180 (460)
T ss_pred HHHHh--CCCCC-EEccCCccc-chHHHHHHcCCEEEEEecccccccc---ccccccCC-cCHHHHHHHHhhcCCCceeE
Confidence 98742 33445 766666555 4444455556555444332110000 00000000 18999999998532 46888
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-c-c-ccc----cCccccccCCCcchhhhhhhcc-CCcc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G-F-RLA----YGGAQEYFGVTPDLTTLGKIIG-GGLP 258 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g-~-~~g----~~~~~~~~~~~~d~~~~sK~~~-~G~~ 258 (411)
++++..+|++|....+.+.+++|+++|++||++||+|++|. + . ... ........++...+.+++|.++ +|++
T Consensus 181 Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K 260 (460)
T PRK13238 181 IVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKK 260 (460)
T ss_pred EEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEeccc
Confidence 88887777766555556669999999999999999999884 1 1 100 0000000001112235566555 3554
Q ss_pred c-----c-ccccc-HHHHHHhcCCCCccc-ccCCCCCHHH-HHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcC
Q 015230 259 V-----G-AYGGR-RDIMEMVAPAGPMYQ-AGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 329 (411)
Q Consensus 259 ~-----g-~~~~~-~~~~~~~~~~~~~~~-~~t~~~~~~~-~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (411)
+ | +++++ +++++.++......+ ..|+++.... +++...+++...+++..+...++.+++.+.|++. +
T Consensus 261 ~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~----G 336 (460)
T PRK13238 261 DAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA----G 336 (460)
T ss_pred CCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC----C
Confidence 3 4 44555 578888765322222 2366665555 4444445544334455555555668888888774 5
Q ss_pred CceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC-----------------CcceeeecC
Q 015230 330 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ-----------------FEAGFTSLA 391 (411)
Q Consensus 330 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~-----------------~~~~~~~~~ 391 (411)
+.......|+++++++.+.. ..+. ...-....++..| .+.||.+.+++ ...+|+.+.
T Consensus 337 ~~~~~p~Gg~~v~~d~~~~~-~~~~----~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~ 411 (460)
T PRK13238 337 VPIQTPAGGHAVFVDAGKFL-PHIP----AEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIP 411 (460)
T ss_pred CCeEccCCceEEEEEchhcC-CCCC----CCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecc
Confidence 44444556788888875421 0000 0111114455555 56699998854 123677544
Q ss_pred C---CHHHHHHHHHHHHHHHH
Q 015230 392 H---SSDDIQHTITAAEKVLR 409 (411)
Q Consensus 392 ~---t~~~i~~~i~~l~~~~~ 409 (411)
- |.++++.+.++|+++.+
T Consensus 412 rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 412 RRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cccCCHHHHHHHHHHHHHHHH
Confidence 4 99999999999988754
No 229
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.88 E-value=6.2e-21 Score=180.60 Aligned_cols=320 Identities=14% Similarity=0.100 Sum_probs=208.6
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~ 130 (411)
.++++++++.+..... ......+..+++.+++++.++ . .+.++++++|+++++.++.. ...++++|++.+++|++
T Consensus 20 ~~~~V~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~--~~~~Gd~Vlv~~~~~~~ 96 (401)
T PLN02409 20 IPERVLRAMNRPNEDH-RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTN--TLSPGDKVVSFRIGQFS 96 (401)
T ss_pred CCHHHHHHhcCCCCCC-CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHh--cCCCCCEEEEeCCCchh
Confidence 5677777765433221 011225667888888888887 3 35789999999999998864 34567889999988775
Q ss_pred Cchh-hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-CcEEEEEEcccCCCCCccCCCHHHHHH
Q 015230 131 HADP-FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNA 208 (411)
Q Consensus 131 ~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~ 208 (411)
.... .....|..+..++.+..... |++++++.++..+ ++++++++.++.+++|.+.+ +++
T Consensus 97 ~~~~~~~~~~g~~v~~v~~~~~~~~--------------~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~ 158 (401)
T PLN02409 97 LLWIDQMQRLNFDVDVVESPWGQGA--------------DLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAG 158 (401)
T ss_pred HHHHHHHHHcCCceEEEECCCCCCC--------------CHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHH
Confidence 4321 12233544444333221111 7899999998532 36788888888888999998 999
Q ss_pred HHHH--HHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCC--ccc---
Q 015230 209 IRRI--TKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--MYQ--- 280 (411)
Q Consensus 209 i~~l--~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~--~~~--- 280 (411)
|.++ |+++|+++|+|++|+ .|. ....+.++++.-+.+.+|+++++..+|+++.+++.++.+.+... .+.
T Consensus 159 i~~l~~~~~~g~~~vvD~v~s---~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 235 (401)
T PLN02409 159 VRKLLDCAQHPALLLVDGVSS---IGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWA 235 (401)
T ss_pred HHHHHhhhccCcEEEEEcccc---cCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHH
Confidence 9999 999999999999997 221 12223334433344778999865569999999998888754211 111
Q ss_pred -------cc---CCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceE-Ee-eecceEEEEE
Q 015230 281 -------AG---TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GG-YISGMFGFFF 345 (411)
Q Consensus 281 -------~~---t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~-~~g~~~~~~~ 345 (411)
.. .++++.....+..++++.+.+ +++.++.+++.+++++.|+++.. ..... .. ..+.+.++.+
T Consensus 236 ~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~--~~~~~~~~~~s~~v~~~~~ 313 (401)
T PLN02409 236 DYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGL--KLCTKKPEWRSDTVTAVVV 313 (401)
T ss_pred HHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCC--eeccCChhhcccceEEEeC
Confidence 11 335666677777788887654 56667777777777777766521 11111 11 1223445544
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccCCC----cceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
. ...+..++.+.|. +.||.+..+.. ..+|+ ...++.+++..++++|++++.++
T Consensus 314 p-------------~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 314 P-------------EGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred C-------------CCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 2222356776664 56999998742 34777 35679999999999999998753
No 230
>PLN02368 alanine transaminase
Probab=99.88 E-value=1.5e-21 Score=183.73 Aligned_cols=249 Identities=15% Similarity=0.055 Sum_probs=162.7
Q ss_pred CCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC
Q 015230 74 PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 150 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (411)
..++++.+++++.+.++ .+++|++|+|+++++..+++.. ...+++.|++.+|+|+... ......|..+..++...
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l-~~~pGd~Vli~~P~Y~~y~-~~~~~~g~~~v~v~~~~ 186 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAV-IRGEKDGVLVPVPQYPLYS-ATISLLGGTLVPYYLEE 186 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHH-cCCCCCEEEEeCCCCccHH-HHHHHcCCEEEEEeccc
Confidence 36788999999987754 5789999999999999988743 1135788999999998654 44444555444443322
Q ss_pred CCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEE-EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 015230 151 SPGVPKGATYETLTAPFNDVSALENLFENN---KGEIA-AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 226 (411)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~-~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~ 226 (411)
..++.. |++++++.++.. ..+++ +++++| +|++|.+.+ .+.+++|.++|++|+++||+||+|
T Consensus 187 ~~~~~~------------d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v~s-~e~l~~l~~~a~~~~~~II~DE~Y 252 (407)
T PLN02368 187 SENWGL------------DVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQCLS-EANLREILKFCYQERLVLLGDEVY 252 (407)
T ss_pred ccCCCC------------CHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCccCC-HHHHHHHHHHHHHcCCEEEEEccc
Confidence 111111 889999988631 11455 555566 455565544 555999999999999999999999
Q ss_pred ccc-cccc--C-ccccc---c-------CCCcchhhhhhhc-c-CCccccccc---ccHHHHHHhcCCCCcccccCCCCC
Q 015230 227 TGF-RLAY--G-GAQEY---F-------GVTPDLTTLGKII-G-GGLPVGAYG---GRRDIMEMVAPAGPMYQAGTLSGN 287 (411)
Q Consensus 227 ~g~-~~g~--~-~~~~~---~-------~~~~d~~~~sK~~-~-~G~~~g~~~---~~~~~~~~~~~~~~~~~~~t~~~~ 287 (411)
..+ ..+. . ..... . +...-+.||||.| + +|||+||++ +++++++.+.... ..+++.+
T Consensus 253 ~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~----~~~~~~~ 328 (407)
T PLN02368 253 QQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA----SIALSPN 328 (407)
T ss_pred cccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh----cccCCCC
Confidence 987 4332 1 11111 1 0112245899998 5 799999997 5888888876421 1245677
Q ss_pred HHHHHHHHHHHHHH-----------hc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEE
Q 015230 288 PLAMTAGIHTLKRL-----------KE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 345 (411)
Q Consensus 288 ~~~~a~~~~~l~~~-----------~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 345 (411)
.+++.++.++++.- ++ +++++.++++.+.+.+.|+++ .++.......|+++|.++
T Consensus 329 ~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~---~g~~~~~P~Gafy~~~~i 395 (407)
T PLN02368 329 VSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC---KNVVCNFTEGAMYSFPQI 395 (407)
T ss_pred cHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEeCCCCeeeEeccCC
Confidence 88888888887421 11 234556677777777777665 122223334466777655
No 231
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=1.7e-20 Score=177.23 Aligned_cols=316 Identities=16% Similarity=0.096 Sum_probs=197.1
Q ss_pred CCCcHHHHHHHHHHHHcCCC-CCC-------CCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh-c-cCCc
Q 015230 51 GHADDQVLAALGETMKKGTS-FGA-------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-TGRE 119 (411)
Q Consensus 51 g~~~~~v~~a~~~~l~~~~~-~~~-------~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~-~-~~~~ 119 (411)
+..++.+++++.+.++.... ... .....+++.+.+++.++ ..++|++++|+++++..++..+.. . .+++
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~ 89 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKK 89 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCC
Confidence 34788899999988875211 111 13446677788888887 678999999999999998875432 1 2345
Q ss_pred EEEEEeCCcCCCchhhhh--hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 120 RIIKFEGCYHGHADPFLV--KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 120 ~vi~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
.|++....|++....... ..|..+..++.... +. .|++++++.++ +++++|+++.+++++|
T Consensus 90 ~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~-------------~d~~~l~~~l~---~~~~lv~~~~~~n~tG 152 (381)
T PRK02948 90 HIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GL-------------IRLVDLERAIT---PDTVLASIQHANSEIG 152 (381)
T ss_pred EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CC-------------CCHHHHHHhcC---CCCEEEEEECCcCCcE
Confidence 555544444432222222 22333333222111 11 18899988876 3567888888888999
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhcc-CCcccccccccHHH-HHHhcC
Q 015230 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI-MEMVAP 274 (411)
Q Consensus 198 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~-~~~~~~ 274 (411)
.+.+ +++|.++|+++|+++++|++|+ + |. ......++.+.-+.+++|.++ .| +|+++.++++ +..+..
T Consensus 153 ~~~~----~~~I~~l~~~~~~~vivD~~~~-~--g~~~~~~~~~~~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~~~ 223 (381)
T PRK02948 153 TIQP----IAEIGALLKKYNVLFHSDCVQT-F--GKLPIDVFEMGIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFP 223 (381)
T ss_pred eehh----HHHHHHHHHHcCCEEEEEChhh-c--cccccCcccCCCCEEEecHHhcCCCCc--EEEEEEcCCCCCCCccc
Confidence 9998 9999999999999999998885 2 21 111223333333458999887 24 7888776654 111110
Q ss_pred CC-CcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee-e----cceEEEEEe
Q 015230 275 AG-PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-I----SGMFGFFFT 346 (411)
Q Consensus 275 ~~-~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~----g~~~~~~~~ 346 (411)
.. .......++.+.++.+++.++++.+.+ ++.+++++++.+++++.|+++ +......+ . ..++.+.+.
T Consensus 224 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~v~~~~~~~~~~~~i~~~~~~ 299 (381)
T PRK02948 224 GTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTL----PLPIEVEGHSTSCLPHIIGVTIK 299 (381)
T ss_pred CCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEeCCCccCcCCEEEEEeC
Confidence 00 000112456778888888888876533 566677778888888877765 22111111 1 112223221
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----------------------cceeee--cCCCHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFTS--LAHSSDDIQHTI 401 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----------------------~~~~~~--~~~t~~~i~~~i 401 (411)
. ....++...|.++||.++.+.. ..+|++ ..+|++|+++++
T Consensus 300 ~--------------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~ 365 (381)
T PRK02948 300 G--------------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTI 365 (381)
T ss_pred C--------------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHH
Confidence 1 1125667778889999986531 347774 567999999999
Q ss_pred HHHHHHHHh
Q 015230 402 TAAEKVLRQ 410 (411)
Q Consensus 402 ~~l~~~~~~ 410 (411)
+.|+++++.
T Consensus 366 ~~l~~~~~~ 374 (381)
T PRK02948 366 HALETIGNQ 374 (381)
T ss_pred HHHHHHHHH
Confidence 999998765
No 232
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.88 E-value=7.9e-20 Score=172.36 Aligned_cols=312 Identities=15% Similarity=0.143 Sum_probs=199.4
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCC--CCC-------CHHHHHHHHHHHhhCC-C-CCEEEEeCChHHHHHHHHHHHHhc-c
Q 015230 49 IIGHADDQVLAALGETMKKGTSF--GAP-------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF-T 116 (411)
Q Consensus 49 ~~g~~~~~v~~a~~~~l~~~~~~--~~~-------~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a~~~al~~~~~~-~ 116 (411)
..|..++.+.+++.+.++..... .+. .....++.+.+++.++ . .+++++|+|+++++..++..+... .
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~ 86 (373)
T cd06453 7 ATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANK 86 (373)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCC
Confidence 34557788999998888663221 111 2334567778888876 4 679999999999999999754221 1
Q ss_pred CCcEEEEEeCCcCCCchhhh---hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 117 GRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
+++.|++.+++|.+...... ...|..+..++......+ |++++++.+.+ ++++|++..++
T Consensus 87 ~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--------------d~~~l~~~l~~---~~~~v~~~~~~ 149 (373)
T cd06453 87 PGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQL--------------DLEALEKLLTE---RTKLVAVTHVS 149 (373)
T ss_pred CCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCc--------------CHHHHHHHhcC---CceEEEEeCcc
Confidence 55778888877776433222 133444444333211111 88999998863 57788887777
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccCCcccccccccHHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~~~~~~~~ 271 (411)
+++|.+.+ +++|.++|++||++|++|++|+. |.. ..+.....+|++++| |++++ .++|++++++++++.
T Consensus 150 ~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~---~~~-~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~ 220 (373)
T cd06453 150 NVLGTINP----VKEIGEIAHEAGVPVLVDGAQSA---GHM-PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEE 220 (373)
T ss_pred cccCCcCC----HHHHHHHHHHcCCEEEEEhhhhc---Cce-eeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhc
Confidence 78899888 99999999999999999999962 111 111112346776665 99986 558999999988887
Q ss_pred hcCCCCcc------------------cccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCC
Q 015230 272 VAPAGPMY------------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGH 330 (411)
Q Consensus 272 ~~~~~~~~------------------~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (411)
+.+..... .....+.+..+..+..++++.+.+ ++++++.+++.+++++.|+++ +.
T Consensus 221 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~----~~ 296 (373)
T cd06453 221 MPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEI----PG 296 (373)
T ss_pred CCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 76421100 000113444455555566666654 344555666666666666554 32
Q ss_pred ceE---EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC------------cceeee--cCCC
Q 015230 331 AIC---GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFTS--LAHS 393 (411)
Q Consensus 331 ~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------------~~~~~~--~~~t 393 (411)
... ....+.++.+.+.. .+..++.+.|.++||.+.++.. ..+|++ ..+|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t 362 (373)
T cd06453 297 VRVYGDAEDRAGVVSFNLEG--------------IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNT 362 (373)
T ss_pred eEEeCCccccCCeEEEEECC--------------cCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCC
Confidence 111 12235666776532 1236788999999999976532 346774 5579
Q ss_pred HHHHHHHHHHH
Q 015230 394 SDDIQHTITAA 404 (411)
Q Consensus 394 ~~~i~~~i~~l 404 (411)
++|+|++++.|
T Consensus 363 ~~di~~~~~~l 373 (373)
T cd06453 363 EEEIDALVEAL 373 (373)
T ss_pred HHHHHHHHhhC
Confidence 99999999864
No 233
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=2.7e-20 Score=175.77 Aligned_cols=313 Identities=17% Similarity=0.115 Sum_probs=191.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCC-C-------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc-cCCcEEE
Q 015230 53 ADDQVLAALGETMKKGTSFGA-P-------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-TGRERII 122 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~-~-------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~-~~~~~vi 122 (411)
.++.+++++.+.++....+.+ . .+..+++.+++++.++ .+++++||+|+++++..+++..... .+++.|+
T Consensus 11 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv 90 (379)
T TIGR03402 11 VDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHII 90 (379)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEE
Confidence 678899999988875322211 1 2235567788888887 6789999999999999999765332 3445666
Q ss_pred EEeCCcCCCchhhhhh--cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccC
Q 015230 123 KFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 200 (411)
Q Consensus 123 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~ 200 (411)
+....|++........ .|..+..++... .+. -|++++++.++ ++++++++..+++++|.+.
T Consensus 91 ~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g~-------------~~~~~l~~~i~---~~~~lv~i~~~~n~tG~~~ 153 (379)
T TIGR03402 91 TTAVEHPAVLSLCQHLEKQGYKVTYLPVDE-EGR-------------LDLEELRAAIT---DDTALVSVMWANNETGTIF 153 (379)
T ss_pred EcccccHHHHHHHHHHHHcCCEEEEEccCC-CCc-------------CCHHHHHHhcC---CCcEEEEEEcccCCeeecc
Confidence 6666666433222222 244444433221 111 17899998886 3567888888888899999
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccCCcccccccccHHHHHHhcCCCCc
Q 015230 201 PKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPM 278 (411)
Q Consensus 201 ~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~~~~~~~~~~~~~~~ 278 (411)
+ +++|.++|++||+++++|++|+ .|. ...+.....+|++++| |.++. ..+|+++.+++.. +.+....
T Consensus 154 ~----~~~I~~l~~~~g~~vivD~~~~---~g~-~~~~~~~~~~D~~~~s~~K~~gp-~G~g~l~v~~~~~--~~p~~~g 222 (379)
T TIGR03402 154 P----IEEIGEIAKERGALFHTDAVQA---VGK-IPIDLKEMNIDMLSLSGHKLHGP-KGVGALYIRKGTR--FRPLLRG 222 (379)
T ss_pred c----HHHHHHHHHHcCCEEEEECccc---ccc-cccCcccCCCCEEEEcHHHcCCC-CceEEEEECCCCC--CCCcccC
Confidence 8 9999999999999999999997 221 1222223456776655 94442 2277776665431 2211000
Q ss_pred ----ccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe----eecceEEEEEecC
Q 015230 279 ----YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG----YISGMFGFFFTEG 348 (411)
Q Consensus 279 ----~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~~~~~~~ 348 (411)
......+.+..+..+..++++.+.+ ++..++.+++.+++++.|++. .+...... .....+.+.+...
T Consensus 223 ~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (379)
T TIGR03402 223 GHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLAR---IPDARLNGDPTKRLPNTVNISFEYI 299 (379)
T ss_pred CccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh---CCCEEEeCCCccCCCCEEEEEecCC
Confidence 0011234455666666667766544 344455666666666666541 23221111 1112333333211
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----------------------cceee--ecCCCHHHHHHHHHH
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFT--SLAHSSDDIQHTITA 403 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----------------------~~~~~--~~~~t~~~i~~~i~~ 403 (411)
...++...|.++||.+.++.. ..+|+ ...+|++|||++++.
T Consensus 300 --------------~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~ 365 (379)
T TIGR03402 300 --------------EGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEV 365 (379)
T ss_pred --------------CHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHH
Confidence 125778888889999987531 34676 467899999999999
Q ss_pred HHHHHHh
Q 015230 404 AEKVLRQ 410 (411)
Q Consensus 404 l~~~~~~ 410 (411)
|++++++
T Consensus 366 l~~~~~~ 372 (379)
T TIGR03402 366 LPPIIAR 372 (379)
T ss_pred HHHHHHH
Confidence 9988764
No 234
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.87 E-value=5.5e-20 Score=173.49 Aligned_cols=312 Identities=15% Similarity=0.135 Sum_probs=195.1
Q ss_pred CcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc----cCCcEEEE
Q 015230 53 ADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF----TGRERIIK 123 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~----~~~~~vi~ 123 (411)
.+|.+.+++...++.... +....+..+++.+++++.++ ..+++++++|+++++..++..+... .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 577777887777654211 12224555888899999997 5667888999999998888654332 23357777
Q ss_pred EeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCH
Q 015230 124 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 203 (411)
Q Consensus 124 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~ 203 (411)
.+++|++ +.......|..+..++...... .|++++++.++.. ..+++++.| ++++|.+.+
T Consensus 112 ~~~~h~~-~~~~~~~~G~~~~~v~~~~~~~--------------~d~~~l~~~l~~~--~~~vv~~~~-~~~tG~~~~-- 171 (373)
T TIGR03812 112 PESAHFS-FEKAAEMLGLELRYAPLDEDYT--------------VDVKDVEDLIDDN--TIGIVGIAG-TTELGQIDD-- 171 (373)
T ss_pred CCcchHH-HHHHHHHcCCeEEEEeeCCCCC--------------cCHHHHHHHHhhC--cEEEEEECC-CCCCCccCC--
Confidence 7766664 3333334454444433221111 1889999988742 345566665 566888888
Q ss_pred HHHHHHHHHHHHhCCEEEEecccccc-c-cccC----ccccccCCCcchh--hhhhhccCCcccccc-cccHHHHHHhcC
Q 015230 204 DFLNAIRRITKENGALLIFDEVMTGF-R-LAYG----GAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDIMEMVAP 274 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li~De~~~g~-~-~g~~----~~~~~~~~~~d~~--~~sK~~~~G~~~g~~-~~~~~~~~~~~~ 274 (411)
+++|.++|++||+++|+|++|+++ . .... ...+..-...|.+ +..|+..+++|.|++ +.++++++.+..
T Consensus 172 --~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~ 249 (373)
T TIGR03812 172 --IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSV 249 (373)
T ss_pred --HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcc
Confidence 999999999999999999999744 1 1100 0111100122433 345854466788866 467777776642
Q ss_pred CCCccccc-----CCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEe
Q 015230 275 AGPMYQAG-----TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346 (411)
Q Consensus 275 ~~~~~~~~-----t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 346 (411)
..+..... ..+.+..+.+++.++++.+.. ++..++..++.+++++.|+++ +......+...++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~~ 325 (373)
T TIGR03812 250 DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI----GFEPVIEPVLNIVAFEVD 325 (373)
T ss_pred cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEcCCCceEEEEEeC
Confidence 22211111 013345667777777776644 456788888888888888775 322111223344444442
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-Ccceee--ecCCCHHHHHHHHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-~~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
. ...+.+.|.++||++.... ...+|+ +..+|++|++++++.|++
T Consensus 326 -------------~---~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -------------D---PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -------------C---HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 1 1478899999999998763 345777 456899999999999975
No 235
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=1e-19 Score=171.18 Aligned_cols=318 Identities=16% Similarity=0.164 Sum_probs=200.2
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCC---CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~ 129 (411)
..+.+++++.+..... .....+..+++.+.+++.++. .+.+++++||++++..++..+ ..+++++++..++++
T Consensus 16 ~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l--~~~~~~vlv~~~~~~ 91 (368)
T PRK13479 16 TSRTVREAMLRDWGSW--DDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL--VPRDGKVLVPDNGAY 91 (368)
T ss_pred CCHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc--cCCCCeEEEEeCCch
Confidence 5666776665543211 111235677888888888873 356889999999999999753 345678888877776
Q ss_pred CCc-hhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHH
Q 015230 130 GHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 208 (411)
Q Consensus 130 ~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~ 208 (411)
+.. .......|..+..++....... |++++++.++..+ +++++++..+++++|...+ +++
T Consensus 92 ~~~~~~~~~~~g~~~~~i~~~~~~~~--------------d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----~~~ 152 (368)
T PRK13479 92 GARIAQIAEYLGIAHVVLDTGEDEPP--------------DAAEVEAALAADP-RITHVALVHCETTTGILNP----LDE 152 (368)
T ss_pred HHHHHHHHHHcCCcEEEEECCCCCCC--------------CHHHHHHHHHhCC-CCcEEEEEcccCccccccC----HHH
Confidence 543 2223334554444433211111 8999999887542 4556666666677888888 999
Q ss_pred HHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCcc--------
Q 015230 209 IRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY-------- 279 (411)
Q Consensus 209 i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~-------- 279 (411)
|.++|+++|+++|+|++|+ + |. ......++.+.-+.+++|++.|...+|++++++++++.+......+
T Consensus 153 i~~l~~~~~~~livDa~~~-~--g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (368)
T PRK13479 153 IAAVAKRHGKRLIVDAMSS-F--GAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQW 229 (368)
T ss_pred HHHHHHHcCCEEEEEcccc-c--CCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHH
Confidence 9999999999999998774 3 21 1222222332224588999865333799999999888776422111
Q ss_pred ------cccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eecceEEEEEe
Q 015230 280 ------QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFT 346 (411)
Q Consensus 280 ------~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~g~~~~~~~~ 346 (411)
....++.+..+.++..++++.+.+ ++..+++.++.+++++.|+++ ++..... ....+..+.+.
T Consensus 230 ~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~~~~~~~~~~ 305 (368)
T PRK13479 230 AYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL----GFEPLLDAEIQSPIIVTFHAP 305 (368)
T ss_pred hhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc----CCcccCCchhcCceEEEEECC
Confidence 111245666666677777776533 345566777777777777665 3221111 11222333332
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC---cceeee--cCCCHHHHHHHHHHHHHHHHhC
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTS--LAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~---~~~~~~--~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
.. ...+..++.+.|.++||.+.++.. +.+|++ ...++++++++++.|+++++++
T Consensus 306 ~~-----------~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 306 AD-----------PAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CC-----------CCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 11 111236789999999999988642 357885 4569999999999999998763
No 236
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.87 E-value=1.4e-19 Score=173.12 Aligned_cols=325 Identities=16% Similarity=0.118 Sum_probs=207.1
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCC--CCC-------CHHHHHHHHHHHhhCC-C-CCEEEEeCChHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAP-------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEA 104 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~--~~~-------~~~~~~l~~~l~~~~~-~-~~~v~~~~~g~~a 104 (411)
..|+|..+. |..++.+++++.+.+...... ... .+..+++.+.+++.++ . +++|+||+|++++
T Consensus 33 ~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEA 106 (424)
T ss_pred eEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH
Confidence 356665332 346778999998887653211 111 1224577778888887 3 4799999999999
Q ss_pred HHHHHHHH-H-hccCCcEEEEEeCCcCCCchhhhh---hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc
Q 015230 105 CMGVLRLA-R-AFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179 (411)
Q Consensus 105 ~~~al~~~-~-~~~~~~~vi~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 179 (411)
+..+++.. + ...+++.|++....|++....... ..|..+..++......+ |++++++.++
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~--------------~~~~l~~~i~- 171 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVL--------------DVEQLKELLS- 171 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCc--------------CHHHHHHHhc-
Confidence 99988642 1 234567888888877765433322 23443333332211111 7899998886
Q ss_pred CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcch--hhhhhhccCCc
Q 015230 180 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL--TTLGKIIGGGL 257 (411)
Q Consensus 180 ~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~--~~~sK~~~~G~ 257 (411)
.++++|++..+++.+|.+.+ +++|.++|+++|+++++|++|+ .|.. ..+.....+|+ .+++|.++. -
T Consensus 172 --~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~---~g~~-~~~~~~~~~d~~~~s~~K~~gp-~ 240 (424)
T PLN02855 172 --EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS---VPHM-PVDVQTLGADFLVASSHKMCGP-T 240 (424)
T ss_pred --cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh---cCCc-CCCchhcCCCEEEeecccccCC-C
Confidence 36788888888888999999 9999999999999999999996 2211 11222223454 478995542 2
Q ss_pred ccccccccHHHHHHhcCCCCcc-------------c-----ccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHH
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMY-------------Q-----AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGE 316 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~-------------~-----~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~ 316 (411)
.+|++++++++++.+.+..... . ....+.+..+.++..++++.+.+ ++..++.++..++
T Consensus 241 G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 320 (424)
T PLN02855 241 GIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTY 320 (424)
T ss_pred ccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3899999988887765321000 0 01113455556666667776554 4555666677777
Q ss_pred HHHHHHHHHHhcCCceEE-------eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCC-----
Q 015230 317 LTQGIIDAGKKAGHAICG-------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----- 383 (411)
Q Consensus 317 ~~~~l~~~~~~~~~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~----- 383 (411)
+++.|+++ +..... ...+.++.|.+... ...++.+.|.++ ||.++.+..
T Consensus 321 l~~~L~~~----~g~~i~~~~~~~~~~r~~~v~~~~~~~--------------~~~~v~~~L~~~~gI~v~~g~~c~~~~ 382 (424)
T PLN02855 321 LYEKLSSV----PGVRIYGPKPSEGVGRAALCAFNVEGI--------------HPTDLSTFLDQQHGVAIRSGHHCAQPL 382 (424)
T ss_pred HHHHHhcC----CCEEEeCCCcccccCcccEEEEEECCc--------------CHHHHHHHhcccCCEEEechhhhhHHH
Confidence 77766554 211111 12345666665321 125788888888 999987542
Q ss_pred -------cceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 384 -------EAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 384 -------~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..+|+ .+..|++|++++++.|+++++.
T Consensus 383 ~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 383 HRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred HHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 24676 4678999999999999998764
No 237
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.87 E-value=2.5e-20 Score=164.40 Aligned_cols=306 Identities=14% Similarity=0.113 Sum_probs=192.4
Q ss_pred CCCCHHHHHHHHHHHhhCC-----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCccc
Q 015230 72 GAPCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 146 (411)
Q Consensus 72 ~~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~ 146 (411)
-+...+++++++.+.+.-+ +++++++++|++.|+++.+.. ...+++..++..|-|.|.--...--+|.++..+
T Consensus 121 ~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fc--LadpgdafLvPtPyY~gfdrdl~~rTgveivpv 198 (471)
T KOG0256|consen 121 HGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFC--LADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPV 198 (471)
T ss_pred cCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHH--hcCCCceeeecCCCCCcccccceeccCceEEEE
Confidence 3458889999999988764 588999999999999987652 223556677777777664222211222222222
Q ss_pred CCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEE-EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 147 GLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAA-IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~-vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
.+.-..++.. +.+.+|.++.+ ...+++. +++||.|+-|.++. +|.+..+.+.|.++++.||+
T Consensus 199 ~c~Ss~~f~i------------tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~--~e~L~~ll~Fa~~kniHvI~ 264 (471)
T KOG0256|consen 199 HCSSSNGFQI------------TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLS--PEELISLLNFASRKNIHVIS 264 (471)
T ss_pred EeecCCCccc------------cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccC--HHHHHHHHHHHhhcceEEEe
Confidence 2221222111 68888877775 2235555 55556555444433 34499999999999999999
Q ss_pred ecccccc-ccc-c-Ccccccc---CCCcc----hhhhhhhcc-CCcccccccc-cHHHHHHhcCCCCcccccCCCCCHHH
Q 015230 223 DEVMTGF-RLA-Y-GGAQEYF---GVTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLA 290 (411)
Q Consensus 223 De~~~g~-~~g-~-~~~~~~~---~~~~d----~~~~sK~~~-~G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~ 290 (411)
||+|++- ... . ....+.. ...+| +.++||-|| .|+|+|.++. ++++....+++.... ..++..
T Consensus 265 DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~-----~vSs~t 339 (471)
T KOG0256|consen 265 DEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG-----LVSSQT 339 (471)
T ss_pred ehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc-----CCcHHH
Confidence 9999854 221 1 1111111 11344 348999999 8999999955 677777666432221 223344
Q ss_pred HHHHHHHHH--HHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHH
Q 015230 291 MTAGIHTLK--RLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 365 (411)
Q Consensus 291 ~a~~~~~l~--~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (411)
+......|. .+.+ ++...+++.+.+++.+.|+++ ++.....+.|+++|+++...-.+. ..+.-.
T Consensus 340 Q~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~lL~s~-------tfe~El 408 (471)
T KOG0256|consen 340 QYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRKLLTSL-------TFEGEL 408 (471)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEhHHhcCcC-------ChHHHH
Confidence 444333332 1111 455667777777788888777 788888899999999986532111 112224
Q ss_pred HHHHHHHHc-CeEeccCCC------cceeeecCC-CHHHHHHHHHHHHHHHH
Q 015230 366 RFYRGMLEE-GVYFAPSQF------EAGFTSLAH-SSDDIQHTITAAEKVLR 409 (411)
Q Consensus 366 ~~~~~l~~~-Gi~v~~~~~------~~~~~~~~~-t~~~i~~~i~~l~~~~~ 409 (411)
.+.+.+.++ ++.++||.. +++|+.++. .++.++-++++|...+.
T Consensus 409 ~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 409 ELWERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred HHHHHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 566677777 999999953 348887655 55555559999988764
No 238
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.87 E-value=1.1e-19 Score=172.87 Aligned_cols=321 Identities=16% Similarity=0.079 Sum_probs=194.4
Q ss_pred cCCCcHHHHHHHHHHHHcCC-----CC-C---CCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 015230 50 IGHADDQVLAALGETMKKGT-----SF-G---APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRE 119 (411)
Q Consensus 50 ~g~~~~~v~~a~~~~l~~~~-----~~-~---~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~~~ 119 (411)
.|..++.+.+++.+.++... .. . ......+++ +.+ +.++ .+++|+|++|+|+++..++.......+++
T Consensus 36 ~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~ 113 (406)
T TIGR01814 36 LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKR 113 (406)
T ss_pred cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCc
Confidence 33457888888887776521 11 0 112222333 334 6666 67899999999999999887532111123
Q ss_pred -EEEEEeCCcCCCchhhh---hhcCCCCcc--cCCCCC-CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 120 -RIIKFEGCYHGHADPFL---VKAGSGVAT--LGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 120 -~vi~~~~~~~~~~~~~~---~~~g~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
.|++....|+....... ...|..+.. ...+.. .+.. |++++++.+++..+++++|+++++
T Consensus 114 ~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~-------------~~~~l~~~~~~~~~~t~lv~~~~v 180 (406)
T TIGR01814 114 YKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETL-------------RLEDILDTIEKNGDDIAVILLSGV 180 (406)
T ss_pred cEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCcc-------------CHHHHHHHHHhcCCCeEEEEEecc
Confidence 45555566665444322 122332210 011111 1111 778888888755567899999999
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~ 271 (411)
++++|.+.| +++|.++|++||+++++|++|+ .|. .+..+.++++..+.+..|++.+| |-|+++..++....
T Consensus 181 ~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~---~G~~~id~~~~gvD~~~~s~hK~l~g~-pG~~l~v~~~~~~~ 252 (406)
T TIGR01814 181 QYYTGQLFD----MAAITRAAHAKGALVGFDLAHA---VGNVPLDLHDWGVDFACWCTYKYLNAG-PGAGAFVHEKHAHT 252 (406)
T ss_pred ccccceecC----HHHHHHHHHHcCCEEEEEcccc---cCCcccccccCCCCEEEEcCccccCCC-CCeEEEEehhhhhh
Confidence 999999999 9999999999999999999997 332 22233345555456788999765 32444444443333
Q ss_pred hcCCCCccccc--------------------CCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhc
Q 015230 272 VAPAGPMYQAG--------------------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA 328 (411)
Q Consensus 272 ~~~~~~~~~~~--------------------t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~ 328 (411)
+.+....+.+. ..+.+..++++..++++.+.+ ++..++.+++.+++++.|+++....
T Consensus 253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 332 (406)
T TIGR01814 253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGP 332 (406)
T ss_pred cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 33211111000 123566777777788887755 4556667777777777766541000
Q ss_pred C-Cce----EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee---cCCCHHHHHHH
Q 015230 329 G-HAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS---LAHSSDDIQHT 400 (411)
Q Consensus 329 ~-~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~---~~~t~~~i~~~ 400 (411)
+ +.. .....+.++.|.+. . ....+.+.|.++||.+.......+|++ +.+|++|++++
T Consensus 333 ~~~~i~~~~~~~~r~~~v~~~~~-~--------------~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l 397 (406)
T TIGR01814 333 PVLTIITPRDHAQRGCQLSLTHP-V--------------PGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDA 397 (406)
T ss_pred CceEEeCCCChhhcCCeEEEEec-C--------------CHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHHHH
Confidence 1 111 11123455666552 1 126788899999999876544567774 46699999999
Q ss_pred HHHHHHHH
Q 015230 401 ITAAEKVL 408 (411)
Q Consensus 401 i~~l~~~~ 408 (411)
+++|++++
T Consensus 398 ~~~l~~~~ 405 (406)
T TIGR01814 398 VNVLEEIL 405 (406)
T ss_pred HHHHHHHh
Confidence 99999875
No 239
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.87 E-value=2.4e-19 Score=168.08 Aligned_cols=327 Identities=12% Similarity=0.054 Sum_probs=194.7
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCC---C-C----CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcE
Q 015230 49 IIGHADDQVLAALGETMKKGTSF---G-A----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 120 (411)
Q Consensus 49 ~~g~~~~~v~~a~~~~l~~~~~~---~-~----~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~ 120 (411)
+-++..|++++++.+.-...... . . ......++.+.+++.++- +++++++|+++++..++... ..+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~i~~~~g~t~al~~~l~~~--~~~gd~ 85 (361)
T cd06452 9 RGGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM-DEARVTPGAREGKFAVMHSL--CEKGDW 85 (361)
T ss_pred cCCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC-ceEEEeCCHHHHHHHHHHHh--cCCCCE
Confidence 34557888888888876431110 0 1 134467888888888754 89999999999999988743 345677
Q ss_pred EEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC----CcEEEEEEcccCCCC
Q 015230 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVVGNS 196 (411)
Q Consensus 121 vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~----~~~~~vi~~~~~~~~ 196 (411)
|++..++|++.. ......|..+..++......+. -|++++++.++... .++++++++.+++++
T Consensus 86 Vl~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~t 152 (361)
T cd06452 86 VVVDGLAHYTSY-VAAERAGLNVREVPNTGHPEYH------------ITPEGYAEVIEEVKDEFGKPPALALLTHVDGNY 152 (361)
T ss_pred EEEcCCcchHHH-HHHHhcCCEEEEEecCCCCCcc------------cCHHHHHHHHHHHhhccCCCceEEEEECCCCCC
Confidence 777767766543 2334445444443332111111 18899998886421 256777777777778
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCC
Q 015230 197 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 197 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~ 275 (411)
|...+ +++|.++|+++|+++|+|++|+ .|. .+....++.+..+.|++|+++++.|+|++++++++++.+...
T Consensus 153 G~~~~----~~~i~~~~~~~~~~vivD~a~~---~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~ 225 (361)
T cd06452 153 GNLHD----AKKIAKVCHEYGVPLLLNGAYT---VGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRT 225 (361)
T ss_pred eeecc----HHHHHHHHHHcCCeEEEECCcc---cCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcc
Confidence 88877 9999999999999999999996 121 122223344444668999998767999999999998887643
Q ss_pred CCcc-------cccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceE--EeeecceEEEEE
Q 015230 276 GPMY-------QAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFF 345 (411)
Q Consensus 276 ~~~~-------~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~~~~~~ 345 (411)
...+ .+.+ .....+..+.++++.+.+ -+...+..++.+++++.|+++. ++... ......++.++.
T Consensus 226 ~~~~~~~~~~~~~~~--~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~v~~~~~~~~n~~~~~~ 300 (361)
T cd06452 226 SQMFKIKEVELLGCT--LRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIE---GIKQLGEKPKNHDLMFFET 300 (361)
T ss_pred ccccccceeeeeccc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEECCCCCCCceEEEEc
Confidence 3211 1111 112233334444443321 1112222334456666666541 11111 012334544444
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-cceeee-cCCCHHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTS-LAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~~-~~~t~~~i~~~i~~l~~~~ 408 (411)
.... ...........++.+.|+++||.+...+. ..+|+. ...|+++++.++++|+++.
T Consensus 301 ~~~~-----~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 301 PSFD-----EIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCcc-----hhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 2100 00000011124689999999999754332 335664 3579999999999998764
No 240
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.86 E-value=5.5e-19 Score=164.72 Aligned_cols=320 Identities=13% Similarity=0.108 Sum_probs=192.8
Q ss_pred CEEEeccCCccccccCC--CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGH--ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~--~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
+.+|+..+.. ..+|- .++++++++.+++++ +....+..+++.+++++.+ +.+++++++|+++|+..+++.+
T Consensus 8 ~~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~a~~~-g~~~~~~~~g~t~al~~al~al- 80 (363)
T TIGR01437 8 KKVINASGKM--TILGVSTVSDEVADAQKRGAQN---YFEIKELVNKTGEYIANLL-GVEDAVIVSSASAGIAQSVAAV- 80 (363)
T ss_pred ceEEECCcEe--ecCCCCCCCHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHhh-CCCeEEEEcCHHHHHHHHHHHH-
Confidence 4566655554 55665 689999999999876 3346677888999998888 4568899999999999999864
Q ss_pred hccCCc---------------EEEEEeCCcCCC---chhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHH
Q 015230 114 AFTGRE---------------RIIKFEGCYHGH---ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 175 (411)
Q Consensus 114 ~~~~~~---------------~vi~~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 175 (411)
..+++ .||+..+.|... ........|..+...... .. -|++++++
T Consensus 81 -~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~--~~--------------~d~~~le~ 143 (363)
T TIGR01437 81 -ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA--NE--------------CSAEQLEA 143 (363)
T ss_pred -hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC--CC--------------CCHHHHHH
Confidence 22333 677766444322 123334444433332211 01 18999999
Q ss_pred HHHcCCCcEEEEE-EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhh
Q 015230 176 LFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKI 252 (411)
Q Consensus 176 ~~~~~~~~~~~vi-~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~ 252 (411)
+++. ++++++ ++..++.+|...+ +++|.++|++||+++|+|++|+ . . ......++ .|++ |++|+
T Consensus 144 ai~~---~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~-~~~~~~~g--~D~~~~S~~K~ 210 (363)
T TIGR01437 144 AITE---KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--D-LQKYYRLG--ADLVIYSGAKA 210 (363)
T ss_pred hcCh---hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--c-hHHHHHcC--CCEEEEeCCcc
Confidence 9973 445444 5554455677777 9999999999999999999996 1 0 00001123 3544 66798
Q ss_pred ccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCC
Q 015230 253 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGH 330 (411)
Q Consensus 253 ~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (411)
++ |++.|++++++++++.+...... ....+.......++..++++.+.+ .+..+...++..+++++|+++ +.
T Consensus 211 l~-gp~~G~l~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i----~g 284 (363)
T TIGR01437 211 IE-GPTSGLVLGKKKYIEWVKLQSKG-IGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTL----KG 284 (363)
T ss_pred cC-CCceEEEEEcHHHHHHHHhccCC-CcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcC----CC
Confidence 86 45689988888887766421110 011111111223344445554443 445555556666777777765 32
Q ss_pred ceEE---eeecc---eEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC--eEecc--CCCcceee-ecCCCHHHHHH
Q 015230 331 AICG---GYISG---MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAP--SQFEAGFT-SLAHSSDDIQH 399 (411)
Q Consensus 331 ~~~~---~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--i~v~~--~~~~~~~~-~~~~t~~~i~~ 399 (411)
.... ...+. ...+.+... ..+....++.+.|.++| |.+++ .....+++ +.+.+++|++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~v~~~~~----------~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~ 354 (363)
T TIGR01437 285 VSASIVQDEAGRDIARAEIRFDES----------ELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGGQLDI 354 (363)
T ss_pred eEEEEecCCCCCcCceEEEEEecc----------CCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHHHHHH
Confidence 2111 11111 011212110 01123478999998876 77764 23334666 45678999999
Q ss_pred HHHHHHHHH
Q 015230 400 TITAAEKVL 408 (411)
Q Consensus 400 ~i~~l~~~~ 408 (411)
++++|.+++
T Consensus 355 ~~~~l~~~~ 363 (363)
T TIGR01437 355 IVERIREIV 363 (363)
T ss_pred HHHHHHHhC
Confidence 999998763
No 241
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.86 E-value=1.9e-19 Score=171.45 Aligned_cols=325 Identities=15% Similarity=0.138 Sum_probs=189.8
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHc-C-CCC------CCC---CHHHHHHHHHHHhhCC-CCCEEEEeCChHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKK-G-TSF------GAP---CLLENVLAEMVISAVP-SIEMVRFVNSGTE 103 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~-~-~~~------~~~---~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~ 103 (411)
+..+++..+- ++ .+|++++++.+.+.. . .+. .+. ..+++...+.+++.++ ....+++ +||++
T Consensus 19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~-~sgt~ 92 (402)
T cd00378 19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQP-HSGSQ 92 (402)
T ss_pred HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeec-CCcHH
Confidence 3456665442 33 489999999877632 1 111 111 2223334556667776 3334444 46899
Q ss_pred HHHHHHHHHHhccCCcEEEEEeCCcCCCchhh----hhhcCCCCcccCCCCC--CCCCCCCCCceeecCCCCHHHHHHHH
Q 015230 104 ACMGVLRLARAFTGRERIIKFEGCYHGHADPF----LVKAGSGVATLGLPDS--PGVPKGATYETLTAPFNDVSALENLF 177 (411)
Q Consensus 104 a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~l~~~~ 177 (411)
|+..++... ..+++.|++.+++|.+..... ....|..+..++.+.. .+.. |++++++.+
T Consensus 93 a~~~~l~~l--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i-------------d~~~l~~~i 157 (402)
T cd00378 93 ANLAVYFAL--LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLI-------------DYDALEKMA 157 (402)
T ss_pred HHHHHHHHh--cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCc-------------CHHHHHHHH
Confidence 999988754 346678999888887653321 2222322222222111 1111 899999988
Q ss_pred HcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-ccc-cccc-CccccccCCCcchhhhhhhcc
Q 015230 178 ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAY-GGAQEYFGVTPDLTTLGKIIG 254 (411)
Q Consensus 178 ~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~-~g~-~~g~-~~~~~~~~~~~d~~~~sK~~~ 254 (411)
... +++++++.+.+ .|...+ +++|.++|++||+++|+|++| .|+ ..|. ..... +.+.-+.++||++
T Consensus 158 ~~~--~~~~v~~~~~~--~~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l- 226 (402)
T cd00378 158 LEF--KPKLIVAGASA--YPRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTL- 226 (402)
T ss_pred HhC--CCCEEEecCcc--cCCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCC-
Confidence 642 45555554322 244445 999999999999999999997 455 3332 11111 2222245899999
Q ss_pred CCcccccccccH-HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCC
Q 015230 255 GGLPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGH 330 (411)
Q Consensus 255 ~G~~~g~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (411)
+|+|.|++++++ ++++.+.........+ +......+++..++..... ++.+++++++.+++++.|++. ++
T Consensus 227 ~G~~gg~i~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~ 300 (402)
T cd00378 227 RGPRGGLILTRKGELAKKINSAVFPGLQG--GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER----GF 300 (402)
T ss_pred CCCCceEEEeccHHHHHHHHHHhCccccC--CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 567899998766 7877775321111111 1122233332333332221 456677888888888888765 33
Q ss_pred ceEE-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC----------CCcceeeec------CCC
Q 015230 331 AICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----------QFEAGFTSL------AHS 393 (411)
Q Consensus 331 ~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~----------~~~~~~~~~------~~t 393 (411)
.... ...+.++|+.+.+... ...++.+.|.++||.+.+. ..+.+|+.. .++
T Consensus 301 ~~~~~~~~~~~v~v~~~~~~~------------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~ 368 (402)
T cd00378 301 KVVSGGTDNHLVLVDLRPKGI------------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMG 368 (402)
T ss_pred eEeecCCCCeEEEEeCCccCC------------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCC
Confidence 2211 2347788888753211 1246677788899999743 123467732 347
Q ss_pred HHHHHHHHHHHHHHHHh
Q 015230 394 SDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 394 ~~~i~~~i~~l~~~~~~ 410 (411)
+++++.+++.|++++++
T Consensus 369 ~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 369 EEEMEEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999998754
No 242
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.6e-19 Score=162.31 Aligned_cols=320 Identities=18% Similarity=0.152 Sum_probs=219.3
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCC
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~ 130 (411)
.+|++++++.+..-.. ...-......++.+.+...++ +.+.++++.||+.++++++.. ...++++|++..++.+|
T Consensus 16 v~~~V~~am~~~~~~h-~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~s--l~~pgdkVLv~~nG~FG 92 (383)
T COG0075 16 VPPRVLLAMARPMVGH-RSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVAS--LVEPGDKVLVVVNGKFG 92 (383)
T ss_pred CCHHHHHHhcCCCCCC-CCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHh--ccCCCCeEEEEeCChHH
Confidence 5777877776543321 001124556777777888887 347788889999999999974 34467888888888777
Q ss_pred Cchhhh-hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHH
Q 015230 131 HADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 209 (411)
Q Consensus 131 ~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i 209 (411)
....-. ...|.++..+..++...+ |++++++.++++ +.+++|.+.++-.++|++.| +++|
T Consensus 93 ~R~~~ia~~~g~~v~~~~~~wg~~v--------------~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp----l~~I 153 (383)
T COG0075 93 ERFAEIAERYGAEVVVLEVEWGEAV--------------DPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP----LKEI 153 (383)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCC--------------CHHHHHHHHhcC-CCccEEEEEeccCcccccCc----HHHH
Confidence 654444 344666666555544443 899999999965 36777888888888999999 9999
Q ss_pred HHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCCc-----------
Q 015230 210 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM----------- 278 (411)
Q Consensus 210 ~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~----------- 278 (411)
.++|++||.++|+|.+-+ -.|..+..+.|+++.-+....|++++---+|.+..+++.++.+......
T Consensus 154 ~~~~k~~g~l~iVDaVsS--~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~ 231 (383)
T COG0075 154 AKAAKEHGALLIVDAVSS--LGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231 (383)
T ss_pred HHHHHHcCCEEEEEeccc--CCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence 999999999999998886 1235667888888777778899998511177888898888887643211
Q ss_pred -c---cccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeec-ceEEEEEecCCC
Q 015230 279 -Y---QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS-GMFGFFFTEGPV 350 (411)
Q Consensus 279 -~---~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~ 350 (411)
+ ....++++.....+..++++.+.+ ++..++.+++.+.+++.++++..+.-. +..... .+..+
T Consensus 232 ~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~--~~~~~s~tvta~------- 302 (383)
T COG0075 232 YMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA--DPERRSPTVTAI------- 302 (383)
T ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc--CcccCCCceEEE-------
Confidence 1 123456677777777888887766 566677888888888888877321111 111111 12222
Q ss_pred CCcchhcccchHHHHHHHHHHHHc-CeEeccCCCc----ceee--ecCCCHHHHHHHHHHHHHHHHhC
Q 015230 351 YNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFE----AGFT--SLAHSSDDIQHTITAAEKVLRQI 411 (411)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~----~~~~--~~~~t~~~i~~~i~~l~~~~~~~ 411 (411)
+.|.+.+..++...++++ |+.+.++..+ .+|| .-..+..++...+.+|..++.++
T Consensus 303 ------~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 303 ------KVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred ------ECCCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 223333334444455544 9999887433 4788 34678999999999999998764
No 243
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.85 E-value=4.9e-19 Score=167.31 Aligned_cols=311 Identities=15% Similarity=0.128 Sum_probs=184.5
Q ss_pred CcHHHHHHHHHHHHcCCCC-----CCCCHHHHHHHHHHH---hhCC--CCCEEEEeCChHHHHHHHHHHHHh--c-cC-C
Q 015230 53 ADDQVLAALGETMKKGTSF-----GAPCLLENVLAEMVI---SAVP--SIEMVRFVNSGTEACMGVLRLARA--F-TG-R 118 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~-----~~~~~~~~~l~~~l~---~~~~--~~~~v~~~~~g~~a~~~al~~~~~--~-~~-~ 118 (411)
.++.+++++.+.+...... .+.......+.+.+. +..+ .+++|++|+|+++++..+++.+.. + .+ +
T Consensus 11 ~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~ 90 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGK 90 (382)
T ss_pred CCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCC
Confidence 6788999999988763211 111122223333332 2333 468999999999999998875421 1 23 4
Q ss_pred cEEEEEeCCcCCCchhhhh--hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCC
Q 015230 119 ERIIKFEGCYHGHADPFLV--KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 196 (411)
Q Consensus 119 ~~vi~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~ 196 (411)
+.|++....|++....... ..|..+..++......+ |++++++.++. +++++++..+++++
T Consensus 91 ~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~g~~--------------d~~~l~~~i~~---~t~lv~~~~~~n~t 153 (382)
T TIGR03403 91 NHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTI--------------TAEQVREAITE---KTALVSVMWANNET 153 (382)
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCCCCC--------------CHHHHHHhccc---CCeEEEEEcccCCC
Confidence 5677776555543333222 23444444333211111 78889888863 46778888788889
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccC-CcccccccccHHHHHHhc
Q 015230 197 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRRDIMEMVA 273 (411)
Q Consensus 197 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~-G~~~g~~~~~~~~~~~~~ 273 (411)
|.+.+ +++|.++|++||+++++|++|+ .|. ...+.....+|++ ++.|.++. | +|+++.++.. .+.
T Consensus 154 G~~~~----~~~I~~la~~~g~~~ivD~a~~---~g~-~~~~~~~~~~D~~~~s~~K~~gp~G--~g~l~vr~~~--~~~ 221 (382)
T TIGR03403 154 GMIFP----IKEIGEICKERGVLFHTDAVQA---IGK-IPVDVQKAGVDFLSFSAHKFHGPKG--VGGLYIRKGV--ELT 221 (382)
T ss_pred ccccC----HHHHHHHHHHcCCEEEEechhh---cCC-CccCccccCCCEEEEcchhhCCCCc--eEEEEECCCC--CCC
Confidence 99998 9999999999999999999996 221 1112222345665 45597652 3 5666555432 111
Q ss_pred CCC---C-cccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee----ecceEEE
Q 015230 274 PAG---P-MYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY----ISGMFGF 343 (411)
Q Consensus 274 ~~~---~-~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~g~~~~~ 343 (411)
+.. . .......+.+..+..++.++++...+ +...+++++..+++.+.|+++ +......+ ...++.+
T Consensus 222 p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~~~~~~~~~~~~~~~~~~ 297 (382)
T TIGR03403 222 PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PDVFVVGDREHRVPNTILI 297 (382)
T ss_pred CcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCEEEECCCCCCcCCEEEE
Confidence 100 0 00011345677777677777765543 333455555555665555543 32222211 1335555
Q ss_pred EEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----------------------cceee--ecCCCHHHHH
Q 015230 344 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAGFT--SLAHSSDDIQ 398 (411)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----------------------~~~~~--~~~~t~~~i~ 398 (411)
.+.. .....+.+.|.++||.++.+.. ..+|+ ...+|++|+|
T Consensus 298 ~~~~--------------~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did 363 (382)
T TIGR03403 298 SIKG--------------VEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEID 363 (382)
T ss_pred EeCC--------------CCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHH
Confidence 5422 1125677778899999986421 23666 4678999999
Q ss_pred HHHHHHHHHHHh
Q 015230 399 HTITAAEKVLRQ 410 (411)
Q Consensus 399 ~~i~~l~~~~~~ 410 (411)
++++.|++++++
T Consensus 364 ~~~~~l~~~~~~ 375 (382)
T TIGR03403 364 YTIEVFKKAVQR 375 (382)
T ss_pred HHHHHHHHHHHH
Confidence 999999988765
No 244
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.3e-19 Score=157.78 Aligned_cols=329 Identities=20% Similarity=0.200 Sum_probs=197.1
Q ss_pred EeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCC
Q 015230 39 IDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 118 (411)
Q Consensus 39 ~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~ 118 (411)
+||.|- ++--.+|++++++.++-..+....+.++...++.+++++.++. ..++|++|||+|+..+|.. ..++
T Consensus 2 ~~f~SD----n~~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~g~-~a~~Fv~sGT~aN~lal~~---~~~~ 73 (342)
T COG2008 2 IDFRSD----NVAGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELFGK-EAALFVPSGTQANQLALAA---HCQP 73 (342)
T ss_pred CccccC----ccCCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHhCC-ceEEEecCccHHHHHHHHH---hcCC
Confidence 466665 3333799999999888654333345677888999999999955 9999999999999999984 3344
Q ss_pred cEEEEEeCCcCCCchhhhh-hcCCCCcccCC-CCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEcccC
Q 015230 119 ERIIKFEGCYHGHADPFLV-KAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVV 193 (411)
Q Consensus 119 ~~vi~~~~~~~~~~~~~~~-~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~~~~ 193 (411)
...+.....-|-..+..-. ..-.+..+++. +...+.. ++++++..++. +...+..++++...
T Consensus 74 ~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-------------t~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 74 GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-------------TPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCc-------------CHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 4444444444533332211 11111122211 2233322 79999998874 12233444444444
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc--cc-ccccCccccccCCCcchhhhhhhccCCcccccc-cccHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT--GF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAY-GGRRDIM 269 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~--g~-~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~-~~~~~~~ 269 (411)
+++|.+.+ .+++++|.++|++||++|++|.+.- .+ ..| .....+....|.++++-+-++|+|+|.+ +++.+++
T Consensus 141 te~GtVy~-l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~ 217 (342)
T COG2008 141 TEGGTVYP-LDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFA 217 (342)
T ss_pred CCCceecC-HHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHH
Confidence 47777655 5559999999999999999998873 22 223 1222333445666544334445588887 7799888
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCC
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 349 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 349 (411)
+.++.... ..+.-+....+..+++..+++.-.......+..++.+++.+.|++. .+.........+++++.+.+.
T Consensus 218 ~~a~~~rK-~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~~l~~~- 292 (342)
T COG2008 218 KRARRWRK-RAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFVRLPES- 292 (342)
T ss_pred HHHHHHHH-HhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEEECChH-
Confidence 87753211 1222333344555555555432111111222333366666666543 233333335677888877431
Q ss_pred CCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHHHH
Q 015230 350 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~~~ 408 (411)
..........+...|+++.+.+ ..+|+ ++.+|++++++++..+++++
T Consensus 293 -----------~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 -----------AIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -----------HHHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 1233455666677788887765 33444 79999999999999998764
No 245
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.84 E-value=9.6e-19 Score=163.25 Aligned_cols=280 Identities=15% Similarity=0.065 Sum_probs=175.5
Q ss_pred CCHHHHHHHHHHHhhCC-C--CCEEEEeCChHHHHHHHHHHHHhc-----------cCCcEEEEEeCCcCCCchhhhhhc
Q 015230 74 PCLLENVLAEMVISAVP-S--IEMVRFVNSGTEACMGVLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKA 139 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~-~--~~~v~~~~~g~~a~~~al~~~~~~-----------~~~~~vi~~~~~~~~~~~~~~~~~ 139 (411)
..++++++++++++.++ + .+.++||+||++|+..+++.++.. .+++.+|+.+...|.....+....
T Consensus 36 ~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~ 115 (345)
T cd06450 36 ATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115 (345)
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHH
Confidence 36778899999999886 2 357999999999999999876432 122446666666665555555555
Q ss_pred CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHh
Q 015230 140 GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 216 (411)
Q Consensus 140 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~ 216 (411)
|..+..++....... |++++++.+++ ...+++++++...++++|.+.+ +++|.++|++|
T Consensus 116 g~~~~~v~~~~~~~~--------------d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~ 177 (345)
T cd06450 116 DVKVRLVPVDEDGRM--------------DPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKY 177 (345)
T ss_pred hcCeEEeeeCCCCCc--------------CHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHh
Confidence 555555443221111 89999999874 1124566666666666888877 99999999999
Q ss_pred CCEEEEecccccc-ccccCccccccCC-Ccch--hhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHH
Q 015230 217 GALLIFDEVMTGF-RLAYGGAQEYFGV-TPDL--TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMT 292 (411)
Q Consensus 217 ~~~li~De~~~g~-~~g~~~~~~~~~~-~~d~--~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a 292 (411)
|+++++|++|+++ ...........+. ..|. .+++|+++++.++|++..+ .+++.
T Consensus 178 ~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------~~~~~ 235 (345)
T cd06450 178 DLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------ALKLW 235 (345)
T ss_pred CCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------HHHHH
Confidence 9999999999744 2111100000111 2353 4789988877778888655 23333
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH
Q 015230 293 AGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 371 (411)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 371 (411)
++...+....-++.+++..++.+++.+.|+++ +..... ...+.++.|.+.... .......++.+.|
T Consensus 236 ~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~iv~f~~~~~~---------~~~~~~~~i~~~L 302 (345)
T cd06450 236 ATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD----PGFELLGEPNLSLVCFRLKPSV---------KLDELNYDLSDRL 302 (345)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceeEEEEEECCcc---------hhhHHHHHHHHHH
Confidence 33333322111556677777777777777665 322111 123456666553210 0023446789999
Q ss_pred HHcCeEeccCC----Ccceeeec--C-CCHHHHHHHHHHHHH
Q 015230 372 LEEGVYFAPSQ----FEAGFTSL--A-HSSDDIQHTITAAEK 406 (411)
Q Consensus 372 ~~~Gi~v~~~~----~~~~~~~~--~-~t~~~i~~~i~~l~~ 406 (411)
.++|+++.+.. ...+|++. . +|+++++++++.|++
T Consensus 303 ~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 303 NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99965544332 23467743 3 499999999999875
No 246
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=1.4e-19 Score=161.58 Aligned_cols=326 Identities=19% Similarity=0.232 Sum_probs=218.4
Q ss_pred cCCCE--EEeccCCccccccCC--CcHHHHHHHHHHHHcCCCC-------CCCCHHHHHHHHHHHhhCCCCCEEEEeCCh
Q 015230 33 IDGNE--YIDYVGSWGPAIIGH--ADDQVLAALGETMKKGTSF-------GAPCLLENVLAEMVISAVPSIEMVRFVNSG 101 (411)
Q Consensus 33 ~~g~~--~~d~~~~~~~~~~g~--~~~~v~~a~~~~l~~~~~~-------~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g 101 (411)
..|.+ .+++.|= |++|+ ++-...++..+.++..... .+..+.+.++.+..++..+..+.++|.- |
T Consensus 131 ~tG~~~~~lNlgSY---NYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~m-G 206 (519)
T KOG1357|consen 131 YTGTRSRCLNLGSY---NYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSM-G 206 (519)
T ss_pred eccceeeeeeeccc---ccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcCCcceEEEec-c
Confidence 44543 4676665 89998 5566777777777773211 2446777888888888887666676665 3
Q ss_pred HHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc--
Q 015230 102 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN-- 179 (411)
Q Consensus 102 ~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-- 179 (411)
-..+...+. .+-+++..|..+.-.|+.....+ +..++.+..++|||+++||+.++.
T Consensus 207 f~TNs~~~p---~l~~~gsLIiSDelNHaSi~~Ga-------------------RLSgAtiRVfkHNdm~~LEr~Lrd~I 264 (519)
T KOG1357|consen 207 FATNSMNIP---SLLGKGSLIISDELNHASLITGA-------------------RLSGATTRVFRHNDMQGLERLLRDAI 264 (519)
T ss_pred ccccccCcc---eeecCCcceeeccccchheeccc-------------------cccCceEEEEecCCHHHHHHHHHHHH
Confidence 444444333 33456666777777776543222 234557888999999999999985
Q ss_pred -------C-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCc---c-
Q 015230 180 -------N-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTP---D- 245 (411)
Q Consensus 180 -------~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~---d- 245 (411)
+ +.++..|+++...++.|.+.. +.++.++++||.++|+.||+|+ |- ..+.....+.++.+| |
T Consensus 265 ~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDI 340 (519)
T KOG1357|consen 265 VYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDI 340 (519)
T ss_pred hcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhhee
Confidence 2 456778999999999999999 9999999999999999999997 44 233445566677654 3
Q ss_pred -hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-------CChHHHHHHHHHHH
Q 015230 246 -LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-------PGTYEYLNKITGEL 317 (411)
Q Consensus 246 -~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-------~~~~~~~~~~~~~~ 317 (411)
+++|.|++++ --|++.+++++++.++.....-...+.. +|+.+.....+++.+.- ++..+++.++..++
T Consensus 341 mMGtftKSfga--~GGyiagsk~lid~lrt~s~~~~yat~~-sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yf 417 (519)
T KOG1357|consen 341 MMGTFTKSFGA--AGGYIAGSKELIDYLRTPSPSALYATSL-SPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYF 417 (519)
T ss_pred ecceehhhccc--ccceecCcHHHHhhhccCCCceeecccC-ChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHH
Confidence 4589999985 2567789999999987543322222333 44444445556665532 45567788888999
Q ss_pred HHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc---------eee
Q 015230 318 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---------GFT 388 (411)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~---------~~~ 388 (411)
+..|+.. +++..-......+.+.+-. ......+.+.|+++++.+..++++. +++
T Consensus 418 r~~l~~~----gfivyG~~dSpVvplll~~-------------~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~ 480 (519)
T KOG1357|consen 418 RWELQKM----GFIVYGNNDSPVVPLLLYG-------------PAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCL 480 (519)
T ss_pred HHhhhcC----cEEEecCCCCCcceeeecC-------------cccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhh
Confidence 8888776 3333222223332332211 1112567888888877776665543 345
Q ss_pred ecCCCHHHHHHHHHHHHHHH
Q 015230 389 SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~l~~~~ 408 (411)
+..+|.|+++.+++.+.++-
T Consensus 481 Sa~ht~e~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 481 SASHTKEDLDRALEVIDRVG 500 (519)
T ss_pred cccccHHHHHHHHHHHhhhc
Confidence 78899999999999987653
No 247
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.84 E-value=2.6e-18 Score=164.20 Aligned_cols=325 Identities=15% Similarity=0.115 Sum_probs=189.5
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcC--CCCCC-----CCHHHHH----HHHHHHhhCC-CCCEEEEeCChHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGA-----PCLLENV----LAEMVISAVP-SIEMVRFVNSGTE 103 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~--~~~~~-----~~~~~~~----l~~~l~~~~~-~~~~v~~~~~g~~ 103 (411)
+..+++.++. ++ .+|++++++.+.+... .+..+ ..+.... ..+.+++.++ ....+++ +||++
T Consensus 25 ~~~~~l~~~~--n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i~~-~sgt~ 98 (416)
T PRK00011 25 EEHIELIASE--NF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANVQP-HSGSQ 98 (416)
T ss_pred hcCeeeeccc--Cc---CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceeeec-CCchH
Confidence 5567877773 33 6899999998776431 11111 1122222 3446777776 3444554 46899
Q ss_pred HHHHHHHHHHhccCCcEEEEEeCCcCCCchhh--hhhcC--CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc
Q 015230 104 ACMGVLRLARAFTGRERIIKFEGCYHGHADPF--LVKAG--SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179 (411)
Q Consensus 104 a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~--~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 179 (411)
|+..++... ..+++.|++..++|.+..... ....+ ..+..++.....+ ..|++++++.++.
T Consensus 99 al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~d~~~l~~~i~~ 163 (416)
T PRK00011 99 ANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETG-------------LIDYDEVEKLALE 163 (416)
T ss_pred HHHHHHHHh--cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccC-------------CcCHHHHHHHHHh
Confidence 999888743 356678888888876543211 11112 1122211110001 1189999999874
Q ss_pred CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccC-ccccccCCCcchhhhhhhccCC
Q 015230 180 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYG-GAQEYFGVTPDLTTLGKIIGGG 256 (411)
Q Consensus 180 ~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~-~~~~~~~~~~d~~~~sK~~~~G 256 (411)
. +++++++.. ++.|...+ +++|.++|++||+++|+|++|+ |+ ..|.. ...+ +.+.-+.|++|++ +|
T Consensus 164 ~--~~k~v~~~~--~~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l-~g 232 (416)
T PRK00011 164 H--KPKLIIAGA--SAYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTL-RG 232 (416)
T ss_pred c--CCCEEEECC--CcCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCC-CC
Confidence 2 455666642 23344556 9999999999999999999985 44 22211 1111 2222245899998 46
Q ss_pred ccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHH-HHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 257 LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHT-LKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 257 ~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~-l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
++.|+++++ +++++.+........ ..+......++...+ .+.+.+ ++.+++++++.+++++.|+++ ++..
T Consensus 233 ~~gg~i~~~~~~~~~~l~~~~~~~~--~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~ 306 (416)
T PRK00011 233 PRGGLILTNDEELAKKINSAVFPGI--QGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER----GFRV 306 (416)
T ss_pred CCceEEEeCCHHHHHHHHHHhCccc--cCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC----CCee
Confidence 789999885 678777753221111 111222233333333 333322 556788888888888888875 3221
Q ss_pred EEe-eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----------Ccceeee------cCCCHH
Q 015230 333 CGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTS------LAHSSD 395 (411)
Q Consensus 333 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----------~~~~~~~------~~~t~~ 395 (411)
... ..+.++++.+.+.. .+...+.+.|.++||.+.... ...+|+. ..+|++
T Consensus 307 ~~~~~~~~~~~i~~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~ 374 (416)
T PRK00011 307 VSGGTDNHLVLVDLRSKG------------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEA 374 (416)
T ss_pred eecCCCCeEEEEeCcccC------------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHH
Confidence 111 23467777763211 122568888999999997421 1235662 256899
Q ss_pred HHHHHHHHHHHHHHh
Q 015230 396 DIQHTITAAEKVLRQ 410 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~ 410 (411)
|++++++.|++++..
T Consensus 375 di~~l~~~l~~~~~~ 389 (416)
T PRK00011 375 EMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999988653
No 248
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.84 E-value=7.1e-19 Score=167.08 Aligned_cols=257 Identities=16% Similarity=0.119 Sum_probs=159.1
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCC--C-------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA--P-------CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC 105 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~--~-------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~ 105 (411)
+.|+|..+. .+ .++.+++++.+.++....... . .+..+++.+.+++.++ .+++++|++|+++++
T Consensus 4 ~~yld~aa~---~~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT---TP---VDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC---CC---CCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 356776554 33 688999999888865221111 1 1335566777888887 678999999999999
Q ss_pred HHHHHHHHh-c-cCCcEEEEEeCCcCCCchhhhhh--cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC
Q 015230 106 MGVLRLARA-F-TGRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 181 (411)
Q Consensus 106 ~~al~~~~~-~-~~~~~vi~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~ 181 (411)
..++..+.. . .+++.|++....|+........+ .|..+..++.... +.. |++++++.++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~-------------d~~~l~~~l~--- 140 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLI-------------DLEELKAAIR--- 140 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcC-------------CHHHHHHhcC---
Confidence 998875432 2 34566776666655433332222 2433344332211 111 7899988886
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccCCccc
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPV 259 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~ 259 (411)
++++++++..+++++|.+.+ +++|.++|++||+++++|++|+ .|.. ..+..+..+|++++| |.+++ ..+
T Consensus 141 ~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a---~g~~-~~~~~~~~~D~~~~s~~K~~gp-~G~ 211 (402)
T TIGR02006 141 DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS---VGKI-PINVNELKVDLMSISGHKIYGP-KGI 211 (402)
T ss_pred CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh---cCCc-ccCccccCCCEEEEehhhhcCC-Cce
Confidence 35678888888888999998 9999999999999999999997 2211 122223456777665 97652 128
Q ss_pred ccccccHHHHHHhcCCCCc----ccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHH
Q 015230 260 GAYGGRRDIMEMVAPAGPM----YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 260 g~~~~~~~~~~~~~~~~~~----~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~ 324 (411)
|+++.+++....+.+.... ......+.+.....+..++++.+.+ ++..++.+++.+++++.|+++
T Consensus 212 G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 212 GALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred EEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 8887776544333321100 0011234555666666677776654 344455666666666666543
No 249
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.84 E-value=2.2e-18 Score=162.69 Aligned_cols=308 Identities=15% Similarity=0.129 Sum_probs=192.8
Q ss_pred CcHHHHHHHHHHHHcCC---CCC-CC-----CHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCcEE
Q 015230 53 ADDQVLAALGETMKKGT---SFG-AP-----CLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 121 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~---~~~-~~-----~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~~v 121 (411)
.++.+.+++.+.++... .++ +. .....++.+.+++.++ ..+++++|+|+++++..++.. ....++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~--~~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG--LLKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh--ccCCCCEE
Confidence 56789999988888732 111 22 1445677888888886 245899999999999998864 23456778
Q ss_pred EEEeCCcCCCchhhh---hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCc
Q 015230 122 IKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 198 (411)
Q Consensus 122 i~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~ 198 (411)
++....|++...... ...|..+..++.... +. .|++++++.++ +++++++++.+++++|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~-------------~d~~~l~~~~~---~~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GL-------------ISPERIKRAIK---TNTKLIVVSHASNVTGT 152 (376)
T ss_pred EECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CC-------------cCHHHHHHhcC---CCCeEEEEECCCCCccc
Confidence 887766665433221 122444433332211 11 17899998885 35778888888888999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEecccc-ccccccCccccccCCCcch--hhhhhhccCCcccccccccHHH-HHHhcC
Q 015230 199 IAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAYGGRRDI-MEMVAP 274 (411)
Q Consensus 199 ~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~~~~~~~~~~~~d~--~~~sK~~~~G~~~g~~~~~~~~-~~~~~~ 274 (411)
+.+ +++|.++|+++|+++|+|++|+ |. ..+..+.+ .+|+ .++.|++++.--.|.++.+++. +..+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~~g~---~~~~~~~~--~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQTAGV---IPIDMTEL--AIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhccCc---cCCCchhc--CCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 998 9999999999999999999996 22 11112222 3454 4677998752225666554433 111111
Q ss_pred CCCccc-------------ccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceE-----
Q 015230 275 AGPMYQ-------------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAIC----- 333 (411)
Q Consensus 275 ~~~~~~-------------~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----- 333 (411)
...... ....+.+.....+..++++.+.+ ++++++.+++.+++++.|+++ +....
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~----~~~~~~~~~~ 299 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREI----NKVKIYGPAD 299 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC----CCeEEeCCCC
Confidence 000000 01123455666666677777665 455667777777777777654 21111
Q ss_pred EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCC--------------Ccceee--ecCCCHHH
Q 015230 334 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ--------------FEAGFT--SLAHSSDD 396 (411)
Q Consensus 334 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~--------------~~~~~~--~~~~t~~~ 396 (411)
....+.++++.+... +..++.+.|.++ ||.+..+. ...+|+ ...+|++|
T Consensus 300 ~~~~~~~v~~~~~~~--------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~d 365 (376)
T TIGR01977 300 PANRVGVVSFTVEGI--------------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEE 365 (376)
T ss_pred ccccCCeEEEEECCC--------------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHH
Confidence 112355666666321 136788999888 99987652 134677 46789999
Q ss_pred HHHHHHHHHH
Q 015230 397 IQHTITAAEK 406 (411)
Q Consensus 397 i~~~i~~l~~ 406 (411)
+++++++|++
T Consensus 366 v~~~~~~l~~ 375 (376)
T TIGR01977 366 IEKLLEALSE 375 (376)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 250
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.84 E-value=1.5e-18 Score=154.60 Aligned_cols=323 Identities=15% Similarity=0.098 Sum_probs=197.4
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHhhCC---CCC-EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhh
Q 015230 61 LGETMKKGTSFGAPCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 136 (411)
Q Consensus 61 ~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~---~~~-~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~ 136 (411)
+..+++-+... +..++...+.+....... ..+ +++.|+|.+.+++.++++ .+..++.|++-..+|.+.....
T Consensus 90 ~s~alQYg~s~-G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~--~~N~gd~vlie~~ty~~AL~s~- 165 (472)
T KOG0634|consen 90 LSRALQYGQSS-GIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRT--LINRGDHVLIEEYTYPSALQSM- 165 (472)
T ss_pred hhhhhcccccc-CcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHH--hhcCCCceEEecccchHHHHhc-
Confidence 44555554322 334444444443331221 234 899999999999999986 4556788888888887533221
Q ss_pred hhcCCCCcccCCC-CCCCCCCCCCCceeecCCCCHHHHHHHHHcCC------CcEEEEEEcccCCCCCccCCCHHHHHHH
Q 015230 137 VKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNK------GEIAAIILEPVVGNSGFIAPKPDFLNAI 209 (411)
Q Consensus 137 ~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~vi~~~~~~~~G~~~~~~~~l~~i 209 (411)
... ++-.++++ +..|+ +++.+++.+.... .++.+..+-|...|....+.+.+-.++|
T Consensus 166 ~a~--gv~~ipv~md~~Gi--------------~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~i 229 (472)
T KOG0634|consen 166 EAL--GVKIIPVKMDQDGI--------------DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKI 229 (472)
T ss_pred ccc--CceEEeccccCCCC--------------CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHH
Confidence 222 23344443 23344 7999999998632 2366777777554433344556669999
Q ss_pred HHHHHHhCCEEEEeccccccccc----c--------------------CccccccCCCcchhhhhhhccCCccccccccc
Q 015230 210 RRITKENGALLIFDEVMTGFRLA----Y--------------------GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 265 (411)
Q Consensus 210 ~~l~~~~~~~li~De~~~g~~~g----~--------------------~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~ 265 (411)
.+|||||++++|.||.|-=+..+ . +...+..|...-+-||||-++.|+|+||+.++
T Consensus 230 y~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~ 309 (472)
T KOG0634|consen 230 YQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGN 309 (472)
T ss_pred HHHHHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecC
Confidence 99999999999999999422111 0 01111112222245899999999999999999
Q ss_pred HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcC-------ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeec
Q 015230 266 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-------GTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 338 (411)
Q Consensus 266 ~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g 338 (411)
+-.++.+... -...|.+++.+.+...-+.++.+.++ +++..+..+...+.+.+.+-...--....+...|
T Consensus 310 ~~~l~ril~~---ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aG 386 (472)
T KOG0634|consen 310 SLFLKRILDL---AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAG 386 (472)
T ss_pred HHHHHHHhhh---cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcc
Confidence 8888777532 23346667777888877777766554 2223333333344444433322111223344569
Q ss_pred ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----------c-ceeeec-CCCHHHHHHHHHHHHH
Q 015230 339 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------E-AGFTSL-AHSSDDIQHTITAAEK 406 (411)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----------~-~~~~~~-~~t~~~i~~~i~~l~~ 406 (411)
+|+|+++.- ...+. ...-....+.+...+.++||.+.+|.. + .+|++. ....++++++++++..
T Consensus 387 mFiwv~i~~-~~~~~---~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~ 462 (472)
T KOG0634|consen 387 MFIWVEIPY-INFDT---KKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGS 462 (472)
T ss_pred eEEEEEecc-ccccc---ccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHH
Confidence 999999851 00000 001122345677788899999988732 1 356653 4477899999999999
Q ss_pred HHHh
Q 015230 407 VLRQ 410 (411)
Q Consensus 407 ~~~~ 410 (411)
++++
T Consensus 463 ~ike 466 (472)
T KOG0634|consen 463 VIKE 466 (472)
T ss_pred HHHH
Confidence 8875
No 251
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.6e-18 Score=146.87 Aligned_cols=328 Identities=15% Similarity=0.133 Sum_probs=211.9
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
+..+|+-|- .+.-...++++++.++......|+. +.-..+|.+..++.+ +.+.-+|++||+.++..+++.- ..
T Consensus 21 ~~~vDLRSD----TvT~PTdeMr~am~eA~vgDdVyGe-D~tt~rLE~~vA~l~-GKEAgLFv~SGTmgNllaIm~H-c~ 93 (384)
T KOG1368|consen 21 HRSVDLRSD----TVTVPTDEMRRAMAEASVGDDVYGE-DPTTNRLEQRVAELF-GKEAGLFVPSGTMGNLLAIMVH-CH 93 (384)
T ss_pred eeccccccc----cccCChHHHHHHHhhcccCcccccC-CccHHHHHHHHHHHh-CccceeeecccccccHHHHHHH-hc
Confidence 345777775 3333567788888887665444432 233345555555555 8888999999999999999742 22
Q ss_pred cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCC-CCCCCCCCCCCceeecCCCCHHHHHHHHHcC-----CCcEEEEEE
Q 015230 116 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENN-----KGEIAAIIL 189 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~~~~vi~ 189 (411)
.++..||+-+.+.--.+.......-.++...+.. ..++.. |++++|+.++.. ...+++|++
T Consensus 94 ~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~dgtm-------------~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368|consen 94 QRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNENDGTM-------------DLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred CCCceEEeccchheeehhccChhhhccceeEeeeeCCCCee-------------eHHHHHHhhcCCCCCccCCCceEEEe
Confidence 3455666655543322222211111222222221 111111 799999999842 245789999
Q ss_pred cccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc---ccccccCccccccCCCcch--hhhhhhccCCcccccc-c
Q 015230 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT---GFRLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAY-G 263 (411)
Q Consensus 190 ~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~---g~~~g~~~~~~~~~~~~d~--~~~sK~~~~G~~~g~~-~ 263 (411)
|..+++.|....|-||+.++.++|++||+.|.+|.+.. ....|. .........|- +||||++++ |+|-+ +
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV--~vk~i~~~fDSVsiCLSKglgA--PVGSViV 236 (384)
T KOG1368|consen 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV--PVKKICSAFDSVSICLSKGLGA--PVGSVIV 236 (384)
T ss_pred eccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC--CHHHHHHhhhhhhhhhhccCCC--CcccEEE
Confidence 99888877778889999999999999999999998774 001111 11112222343 589999998 88876 8
Q ss_pred ccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcC-CceEEe-eecceE
Q 015230 264 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGG-YISGMF 341 (411)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~-~~g~~~ 341 (411)
+++++++..+..+.. .++.+....+.+++++.+++. .-....+-.++++.+.+.++.. + +...+. ....++
T Consensus 237 G~k~FI~kA~~~RKa-lGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~----~~i~v~v~a~etNiv 309 (384)
T KOG1368|consen 237 GSKDFIDKARHFRKA-LGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTP----EEIRVEVPAVETNIV 309 (384)
T ss_pred ccHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhccc----cceeeecchhhccee
Confidence 899988766532222 234566677778888777753 2235566777777777777744 3 333444 346677
Q ss_pred EEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHHHH
Q 015230 342 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l~~ 406 (411)
.+++.... .+++++++.+.+.||++-++....+|+ ...+|+++++..+..+.+
T Consensus 310 ~~~l~q~~------------~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 310 NMVLCQAR------------LTAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred eeeccccc------------CCHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHH
Confidence 77664432 234899999999999999886666666 466799999999999954
No 252
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.82 E-value=1.8e-18 Score=162.79 Aligned_cols=307 Identities=17% Similarity=0.178 Sum_probs=209.0
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCC-----C-C---CHHHHHHHHHHHhhCC-CC-CEEEEeCChHHHHHHHHHHHHh-ccC
Q 015230 50 IGHADDQVLAALGETMKKGTSFG-----A-P---CLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARA-FTG 117 (411)
Q Consensus 50 ~g~~~~~v~~a~~~~l~~~~~~~-----~-~---~~~~~~l~~~l~~~~~-~~-~~v~~~~~g~~a~~~al~~~~~-~~~ 117 (411)
.|..++.+.+++.+.+......+ . . .+..+++.+.+++.++ .. ++|+|++|++++++.++..... ..+
T Consensus 8 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~ 87 (371)
T PF00266_consen 8 TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKP 87 (371)
T ss_dssp S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTT
T ss_pred ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccccc
Confidence 34478899999999988732211 1 1 3445677778888887 55 7999999999999999986532 567
Q ss_pred CcEEEEEeCCcCCCchhhhhh---cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 118 RERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
++.|++....|++........ .|..+..++.+....+ |++++++.+. +++++|++..+.+
T Consensus 88 g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~--------------~~~~~~~~l~---~~~~lv~~~~~~~ 150 (371)
T PF00266_consen 88 GDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSL--------------DLEDLEEALN---PDTRLVSISHVEN 150 (371)
T ss_dssp TCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSC--------------SHHHHHHHHH---TTESEEEEESBET
T ss_pred ccccccccccccccccccccccccchhhhccccccccchh--------------hhhhhhhhhc---cccceEEeecccc
Confidence 889999999999876444333 2444444333222222 7999999997 5799999999999
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccCCcccccccccHHHHHHh
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMV 272 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~ 272 (411)
.+|...| +++|.++|+++|+++++|.+|+ .|.. ..+.....+|++ +..| ++|+--+|+++.+++.++.+
T Consensus 151 ~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~---~g~~-~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~ 221 (371)
T PF00266_consen 151 STGVRNP----IEEIAKLAHEYGALLVVDAAQS---AGCV-PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERL 221 (371)
T ss_dssp TTTBBSS----HHHHHHHHHHTTSEEEEE-TTT---TTTS-S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHH
T ss_pred cccEEee----eceehhhhhccCCceeEechhc---cccc-cccccccccceeeecccc-cCCCCchhhheehhhhhhcc
Confidence 9999999 9999999999999999999997 2211 122223345655 5669 77643489999999999888
Q ss_pred cCCCCccc------------------ccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015230 273 APAGPMYQ------------------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA 331 (411)
Q Consensus 273 ~~~~~~~~------------------~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (411)
.+...... ...-+.+.....+..++++.+.+ +++.++..++.+++++.|+++ +..
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~----~~~ 297 (371)
T PF00266_consen 222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEEL----PGI 297 (371)
T ss_dssp HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----TTE
T ss_pred ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcC----Cce
Confidence 64322111 00114566666666677777644 566677777777777777775 332
Q ss_pred eE-----EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC------------cceee--ecCC
Q 015230 332 IC-----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFT--SLAH 392 (411)
Q Consensus 332 ~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------------~~~~~--~~~~ 392 (411)
.. ....+.++.+.+... +...+.+.|.++||.+..+.. ..+|+ ....
T Consensus 298 ~~~~~~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~n 363 (371)
T PF00266_consen 298 EVLGPDDEPRRPSIVSFNLPGS--------------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYN 363 (371)
T ss_dssp EESSSSCGGBGTTEEEEEETTS--------------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTS
T ss_pred eEeeecccccccceEEEeecCC--------------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCC
Confidence 21 233566777777322 237889999999999998643 34676 4677
Q ss_pred CHHHHHHH
Q 015230 393 SSDDIQHT 400 (411)
Q Consensus 393 t~~~i~~~ 400 (411)
|++|+|++
T Consensus 364 t~~dv~~l 371 (371)
T PF00266_consen 364 TEEDVDRL 371 (371)
T ss_dssp SHHHHHHH
T ss_pred CHHHHhhC
Confidence 99999975
No 253
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.82 E-value=2.6e-18 Score=160.64 Aligned_cols=310 Identities=13% Similarity=0.056 Sum_probs=195.3
Q ss_pred cHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCch
Q 015230 54 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 133 (411)
Q Consensus 54 ~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~ 133 (411)
.++.++++.+.+..+..+ +.....+++.+++++.+ +.+++++|+||++|+..+++.+ ...+++.||+..++|.+...
T Consensus 10 ~~~e~~a~~~~~~~~~~~-~~g~~~~~~e~~la~~~-g~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~~~ 86 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLS-GDGPFSRRCETWLENRT-GTKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTAN 86 (376)
T ss_pred CHHHHHHHHHHHHcCCcc-CCcHHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHHHH
Confidence 455678898988875432 23566788888888877 6678999999999999988643 34567889999888886543
Q ss_pred hhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHH
Q 015230 134 PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 213 (411)
Q Consensus 134 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~ 213 (411)
.. ...|..+..++........ |++++++.++ +++++|+ |++ .+|...+ +++|.++|
T Consensus 87 ~~-~~~G~~~v~vd~d~~~~~~-------------d~~~le~~i~---~~tk~Ii--p~~-~~G~~~d----~~~I~~la 142 (376)
T TIGR02379 87 AF-VLRGAKIVFVDIRPDTMNI-------------DETLIESAIT---HRTKAIV--PVH-YAGVACD----MDTIMALA 142 (376)
T ss_pred HH-HHcCCEEEEEecCCCcCCC-------------CHHHHHHhcC---cCceEEE--EeC-CCCCccC----HHHHHHHH
Confidence 33 3445555554433211111 7888998886 3566665 333 3566666 99999999
Q ss_pred HHhCCEEEEeccccccccccCccccccCCCcchhhhh----hhccCCcccccccc-cHHHHHHhcCCCCc----------
Q 015230 214 KENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGG-RRDIMEMVAPAGPM---------- 278 (411)
Q Consensus 214 ~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s----K~~~~G~~~g~~~~-~~~~~~~~~~~~~~---------- 278 (411)
++||++||+|++|+-. ..+.....+...|+.+|| |.+..|.+.|+++. ++++.+.++..+..
T Consensus 143 ~~~~i~vIeDaa~~~g---~~~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 219 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVM---STYKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRG 219 (376)
T ss_pred HHCCCEEEEECccccC---CccCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCcccccc
Confidence 9999999999999722 111111123334677777 98987778898865 47777766521100
Q ss_pred --------ccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH----hcCCce-EEeeecceEEEEE
Q 015230 279 --------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAGHAI-CGGYISGMFGFFF 345 (411)
Q Consensus 279 --------~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~-~~~~~g~~~~~~~ 345 (411)
..+..+..+.+.++.+.+.++.+ ++..++.+++.+++.+.|.++.. ..+... .....-.++++.+
T Consensus 220 ~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (376)
T TIGR02379 220 EVDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKL 297 (376)
T ss_pred CCCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEE
Confidence 01234455667777776667655 44556666777777777765421 111100 0000111233433
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-----------C---------------cceeee--cCCCHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------F---------------EAGFTS--LAHSSDDI 397 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----------~---------------~~~~~~--~~~t~~~i 397 (411)
.. ..+.+++.+.|.++||.+.+.. . ..+++| ...|++++
T Consensus 298 ~~-------------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~ 364 (376)
T TIGR02379 298 KD-------------EDDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQ 364 (376)
T ss_pred CC-------------cCCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHH
Confidence 21 1123689999999999876321 0 014554 45799999
Q ss_pred HHHHHHHHHHH
Q 015230 398 QHTITAAEKVL 408 (411)
Q Consensus 398 ~~~i~~l~~~~ 408 (411)
+..++.|++++
T Consensus 365 ~~i~~~i~~~~ 375 (376)
T TIGR02379 365 ARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 254
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.82 E-value=1.4e-17 Score=157.95 Aligned_cols=310 Identities=14% Similarity=0.080 Sum_probs=181.8
Q ss_pred CcHHHHHHHHHHH-HcC-CCCCC-----CCHHHHHHHH----HHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEE
Q 015230 53 ADDQVLAALGETM-KKG-TSFGA-----PCLLENVLAE----MVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 121 (411)
Q Consensus 53 ~~~~v~~a~~~~l-~~~-~~~~~-----~~~~~~~l~~----~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~v 121 (411)
.||++++++...+ .+. .++++ -.+...++.+ .+++.++.....++++||+.|+..++... ..+++.|
T Consensus 40 ~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A~~~~l~al--~~~GD~V 117 (416)
T PRK13034 40 TSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQANGAVYLAL--LKPGDTI 117 (416)
T ss_pred CCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHHHHHHHHHh--cCCCCEE
Confidence 5999999999996 542 22211 1455666766 88888854433356789999999999753 4566777
Q ss_pred EEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC------CCCHHHHHHHHHcCCCcEEEEEEc-ccCC
Q 015230 122 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP------FNDVSALENLFENNKGEIAAIILE-PVVG 194 (411)
Q Consensus 122 i~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~~~~~~~~~~~vi~~-~~~~ 194 (411)
++...++.+...........+... ....+. ..|++++++.++.. ++++|+++ +++
T Consensus 118 l~~~~~~~~~~~~g~~~~~~~~~~---------------~~~~~~~~~~~~~~d~~~le~~l~~~--~~klVi~~~~~~- 179 (416)
T PRK13034 118 LGMSLSHGGHLTHGAKVSLSGKWY---------------NAVQYGVDRLTGLIDYDEVEELAKEH--KPKLIIAGFSAY- 179 (416)
T ss_pred EEcCccceeeeecCCcceecccee---------------eeEEcccccccCCcCHHHHHHHHhhc--CCeEEEECCCcc-
Confidence 777666654221111100000000 001111 13899999888643 45777774 443
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcc--hhhhhhhccCCcccccccccH-HHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPD--LTTLGKIIGGGLPVGAYGGRR-DIM 269 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d--~~~~sK~~~~G~~~g~~~~~~-~~~ 269 (411)
|...+ +++|.++|++||++||+|++|+ |. ..|... . ..+ ..| +.+++|+++|+ ..|+++++. .+.
T Consensus 180 --g~~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~~-~-~~~-~~Di~~~s~~K~l~g~-~GG~v~~~~~~~~ 249 (416)
T PRK13034 180 --PRELD----FARFREIADEVGALLMVDMAHIAGLVAAGEHP-N-PFP-HAHVVTTTTHKTLRGP-RGGMILTNDEEIA 249 (416)
T ss_pred --ccccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCCC-C-CCC-CceEEEEeCcccCCCC-CCeEEEECcHHHH
Confidence 45556 9999999999999999999996 44 333211 1 111 245 44789999652 234555554 444
Q ss_pred HHhcCCCCcccccCCCCCHHHHHH-HHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeecceEEEEE
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTA-GIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFF 345 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~-~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~ 345 (411)
+.++.. .+.+.+-...+...++ +.+.++.+.. ++.++++.++.++++++|+++ ++.... .....++.+.+
T Consensus 250 ~~~~~~--~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~----G~~~~~~~~~t~i~~v~~ 323 (416)
T PRK13034 250 KKINSA--VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER----GYDLVSGGTDNHLLLVDL 323 (416)
T ss_pred HHHHhh--cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc----CCEeccCCCCCcEEEEEc
Confidence 444421 1111111122333333 3344444422 345788999999999999876 222111 12355666666
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC------C----Ccceeee--c----CCCHHHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS------Q----FEAGFTS--L----AHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~------~----~~~~~~~--~----~~t~~~i~~~i~~l~~~~~ 409 (411)
.+.. .....+.+.|.++||++... . ...+|+. . .++++|++++++.|++++.
T Consensus 324 ~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 324 RPKG------------LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCC------------CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 4322 12255668888899999752 1 1236763 3 6789999999999998876
Q ss_pred h
Q 015230 410 Q 410 (411)
Q Consensus 410 ~ 410 (411)
+
T Consensus 392 ~ 392 (416)
T PRK13034 392 D 392 (416)
T ss_pred c
Confidence 3
No 255
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=1.3e-18 Score=162.92 Aligned_cols=237 Identities=19% Similarity=0.153 Sum_probs=160.0
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
......++.+.+++..+ .+++++++||++|+..++... ..+++.|++..+.|++.........
T Consensus 38 ~~p~~~~le~~la~l~g-~~~a~~~~sG~~Ai~~~l~~l--~~~gd~Vl~~~~~y~~~~~~~~~~~-------------- 100 (369)
T cd00614 38 GNPTVDALEKKLAALEG-GEAALAFSSGMAAISTVLLAL--LKAGDHVVASDDLYGGTYRLFERLL-------------- 100 (369)
T ss_pred CChhHHHHHHHHHHHHC-CCCEEEEcCHHHHHHHHHHHH--cCCCCEEEECCCCcchHHHHHHHHH--------------
Confidence 46667888888888874 467788889999999999753 3466788888888876442221111
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
...+..+..++.+|++++++.++ +++++|++|+++|+.|.+.+ +++|.++|++||+++|+|++|+.. .
T Consensus 101 --~~~g~~~~~v~~~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~---~ 168 (369)
T cd00614 101 --PKLGIEVTFVDPDDPEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATP---Y 168 (369)
T ss_pred --hhcCeEEEEeCCCCHHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcch---h
Confidence 01123455566668899988886 36789999999989999988 999999999999999999999622 1
Q ss_pred CccccccCCCcch--hhhhhhccC-C-cccccccccH-HHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 234 GGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 234 ~~~~~~~~~~~d~--~~~sK~~~~-G-~~~g~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
. ........|+ .|++|.++| | .+.|++++++ ++++.++... .......+++.++++...++.+ +..++
T Consensus 169 ~--~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---~~~g~~~~p~~a~~~l~~l~tl--~~r~~ 241 (369)
T cd00614 169 L--QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR---LALGTILSPFDAWLLLRGLKTL--PLRME 241 (369)
T ss_pred c--CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH---HhhCCCCCHHHHHHHHcCCCCH--HHHHH
Confidence 1 1112223454 489999985 4 7789998876 7777776321 1123455677777665555432 33567
Q ss_pred HHHHHHHHHHHHHHHHHH----hcCCc-e---------EEeeecceEEEEEe
Q 015230 309 YLNKITGELTQGIIDAGK----KAGHA-I---------CGGYISGMFGFFFT 346 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~----~~~~~-~---------~~~~~g~~~~~~~~ 346 (411)
+..++..++.+.|++... .+|.. . ...+.|.++.|++.
T Consensus 242 ~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 242 RHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 778888888888876521 01210 0 11345888888884
No 256
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.81 E-value=1e-17 Score=157.66 Aligned_cols=351 Identities=14% Similarity=0.079 Sum_probs=189.2
Q ss_pred cCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRL 111 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~ 111 (411)
..|..++||.+-.++ ..+.++..+++..+. .|... .-..+|.+.+++.+ +.+++++|+||++|+..+++.
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~Y~~~-~g~~~Leeaia~~~-g~~~vv~t~~Gt~Al~la~~a 87 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEAYAGS-KSFYDLEDAVQDLF-GFKHIIPTHQGRGAENILFSI 87 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCccCCC-CCHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHHH
Confidence 456677898877433 234455555555532 33322 22234444444444 667899999999999999874
Q ss_pred HHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC-CCHHHHHHHHHcC-CCcEEEEEE
Q 015230 112 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENN-KGEIAAIIL 189 (411)
Q Consensus 112 ~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~-~~~~~~vi~ 189 (411)
+.+++++|..++.|.. +.......|..+..++.....+... ... +.. -|++++++.++.. ..++++|++
T Consensus 88 ---l~~pGD~V~~~~~f~~-~~~~i~~~Ga~pv~v~i~~~~~~~~---~~p--f~gniD~e~Le~~I~~~~~~~~~~I~v 158 (431)
T cd00617 88 ---LLKPGRTVPSNMHFDT-TRGHIEANGAVPVDLVIDEAHDAQE---LIP--FKGNIDVAKLEKLIDEVGAENIPYIVL 158 (431)
T ss_pred ---hCCCCCEEccCCcccc-hHHHHHhCCCEeEEEeccccccccc---ccC--CCCCcCHHHHHHHhCcccCCCccEEEE
Confidence 2334444544444443 3444455555444433321111000 000 000 1899999999853 234777777
Q ss_pred cccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-c---c---ccccCccccccCCCcchhhhhhhcc-CCcc---
Q 015230 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G---F---RLAYGGAQEYFGVTPDLTTLGKIIG-GGLP--- 258 (411)
Q Consensus 190 ~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g---~---~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~--- 258 (411)
+..+|.+|..+.+.+.+++|.++|++||++||.|+++. + | |.+.........+...+.++||.+. +|++
T Consensus 159 ~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~ 238 (431)
T cd00617 159 TITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGL 238 (431)
T ss_pred ECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCC
Confidence 65555543344456669999999999999999999975 1 1 0011000000011123456788776 5665
Q ss_pred --cc-cccccH-HHHHHhcCCCCccc-ccCC-CCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 259 --VG-AYGGRR-DIMEMVAPAGPMYQ-AGTL-SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 259 --~g-~~~~~~-~~~~~~~~~~~~~~-~~t~-~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
+| |+++++ ++++.++....... ..+. +.+....++...+++...+.+..++..++.+++.+.|++. ++..
T Consensus 239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~----G~~v 314 (431)
T cd00617 239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA----GVPI 314 (431)
T ss_pred CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC----CCCc
Confidence 44 778875 58887763211111 1111 1233333333335543222222333333447777777766 5444
Q ss_pred EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH-HHcCeEeccCC-----------------Ccceee--e-cC
Q 015230 333 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ-----------------FEAGFT--S-LA 391 (411)
Q Consensus 333 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~-----------------~~~~~~--~-~~ 391 (411)
..+..|++++++...... .+. +..-.+..++..| .+.||.+.--+ ...+|+ | ..
T Consensus 315 ~~P~Ggh~v~~d~~~~~~-~~~----~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 315 VEPAGGHAVFIDAREFLP-HIP----QEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred cCCCcceEEEEEhHHhcC-CCC----cccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 445667899998754210 000 0111235666444 55588864311 112565 4 46
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 015230 392 HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~~ 410 (411)
.|.+++|.+.+.|..++++
T Consensus 390 ~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 390 YTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 6999999999999887754
No 257
>PLN02651 cysteine desulfurase
Probab=99.80 E-value=6e-18 Score=158.73 Aligned_cols=245 Identities=16% Similarity=0.079 Sum_probs=157.2
Q ss_pred CCcHHHHHHHHHHHHcCCCCCCC---------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHh-c-cCCc
Q 015230 52 HADDQVLAALGETMKKGTSFGAP---------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-TGRE 119 (411)
Q Consensus 52 ~~~~~v~~a~~~~l~~~~~~~~~---------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~-~-~~~~ 119 (411)
..++++.+++.+.+......... .+..+++.+.+++.++ .+++++||+|+++++..++..+.. . .+++
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~ 89 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKK 89 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCC
Confidence 47889999998888652211111 3335677788888887 678999999999999998875532 2 3456
Q ss_pred EEEEEeCCcCCCchhhhhh--cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 120 RIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 120 ~vi~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
+|++....|++.......+ .|..+..++......+ |++++++.++ ++++++++..+++.+|
T Consensus 90 ~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~~~~--------------d~~~l~~~i~---~~t~lv~v~~~~n~tG 152 (364)
T PLN02651 90 HVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSDGLV--------------DLDELAAAIR---PDTALVSVMAVNNEIG 152 (364)
T ss_pred EEEEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcC--------------CHHHHHHhcC---CCcEEEEEECCCCCce
Confidence 7777666666533332222 2333333332211111 7899998886 3578888888888899
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchh--hhhhhccCCcccccccccHHHHHHhcC
Q 015230 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAP 274 (411)
Q Consensus 198 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~ 274 (411)
.+.| +++|.++|++||+++++|.+|+ .|. .+..+.+ .+|++ +..|+ .|..-+|+++.+++....+.+
T Consensus 153 ~~~~----l~~I~~~~~~~g~~~~vD~a~~---~g~~~~~~~~~--~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p 222 (364)
T PLN02651 153 VIQP----VEEIGELCREKKVLFHTDAAQA---VGKIPVDVDDL--GVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEP 222 (364)
T ss_pred eccc----HHHHHHHHHHcCCEEEEEcchh---hCCcccCcccC--CCCEEEechhhh-CCCCceEEEEEcCCCCCCCCc
Confidence 9999 9999999999999999999997 221 1222333 34654 56696 332338888888776655543
Q ss_pred CCCcc----cccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHH
Q 015230 275 AGPMY----QAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 323 (411)
Q Consensus 275 ~~~~~----~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~ 323 (411)
..... .....+.+..+..+..++++.+.+ ++..++.+++.+++++.|++
T Consensus 223 ~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 223 LMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred cccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 21100 011335566777777778887654 44455666666666666654
No 258
>PLN02242 methionine gamma-lyase
Probab=99.80 E-value=4.4e-18 Score=160.70 Aligned_cols=221 Identities=15% Similarity=0.126 Sum_probs=144.8
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.+...+++.+.+++.+ +.+.+++++||++|+..++... ...++.|++..+.|.+.........
T Consensus 74 ~~Pt~~~LE~~lA~l~-g~~~~l~~~sG~~Ai~~al~al--~~~GD~Vl~~~~~Y~~~~~~~~~~~-------------- 136 (418)
T PLN02242 74 FNPTVLNLGRQMAALE-GTEAAYCTASGMSAISSVLLQL--CSSGGHVVASNTLYGGTHALLAHFL-------------- 136 (418)
T ss_pred CChhHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEcCCcHHHHHHHHHHhh--------------
Confidence 4666788888888887 5567789999999999998743 3466788888777754322111000
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
....+..+..++..|+++++++++. .++++|+++.++|++|.+.+ +++|.++|++||++||+||+|+.+....
T Consensus 137 -~~~~G~~~~~~d~~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~~ 209 (418)
T PLN02242 137 -PRKCNITTTFVDITDLEAVKKAVVP--GKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLSP 209 (418)
T ss_pred -hhccCceEEEcCCCCHHHHHHhcCc--CCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCCH
Confidence 0001223344444588999988863 24788889988888898887 9999999999999999999997431111
Q ss_pred CccccccCCCcchhhhhhhccC-Ccc-cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYL 310 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~-~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~ 310 (411)
..++.+.-+.|+||.+++ |.+ .||+++++++++.+....... ....+..+..+.++..+.. +.. +..+++.
T Consensus 210 ----~~~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~-~~~~g~~~~~~~A~l~~~~-l~tl~~r~~~~ 283 (418)
T PLN02242 210 ----ARLGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA-LMLLGPTMNPKVAFELSER-LPHLSLRMKEH 283 (418)
T ss_pred ----HHcCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh-hhccCCCCCHHHHHHHHcC-CCcHHHHHHHH
Confidence 112333335689999985 666 588899998888776322110 0112223333333333322 222 3455678
Q ss_pred HHHHHHHHHHHHHH
Q 015230 311 NKITGELTQGIIDA 324 (411)
Q Consensus 311 ~~~~~~~~~~l~~~ 324 (411)
++++.++.+.|++.
T Consensus 284 ~~~a~~la~~L~~~ 297 (418)
T PLN02242 284 CRRAMEYAKRMKEL 297 (418)
T ss_pred HHHHHHHHHHHHhC
Confidence 88888888888876
No 259
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.80 E-value=7.2e-18 Score=158.57 Aligned_cols=286 Identities=15% Similarity=0.076 Sum_probs=179.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.+....++.+.+++.++. +..++++||+.|+..++... ..+++.|++..+.|.+...........
T Consensus 59 ~~pt~~~Le~~lA~l~G~-~~al~~~sG~~Ai~~~l~al--~~~Gd~Vv~~~~~y~~~~~~~~~~~~~------------ 123 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-EEALAFGSGMAAISATLIGF--LKAGDHIICSNGLYGCTYGFLEVLEEK------------ 123 (386)
T ss_pred CCcchHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCcHHHHHHHHHHHHhh------------
Confidence 455568888888888864 46677778999988877532 345677777776665432222111111
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
.+.++..++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+....+.
T Consensus 124 ----~gi~~~~~~~~d~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~~ 192 (386)
T PRK06767 124 ----FMITHSFCDMETEADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSPYLQR 192 (386)
T ss_pred ----cCeEEEEeCCCCHHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 011222333347888888876 35788888888888898888 9999999999999999999996211111
Q ss_pred CccccccCCCcchhhhhhhccC-Cccc-ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~~-g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
.. ..+.+.-+.|++|.++| |.++ |+++++++.++.+........+ ...+++.++.+...++.+ +...++.+
T Consensus 193 pl---~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g--~~~~~~~a~l~~~~L~tl--~~r~~~~~ 265 (386)
T PRK06767 193 PL---ELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIG--GIMAPFDAWLLLRGLKTL--AVRMDRHC 265 (386)
T ss_pred ch---hcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhC--CCCCHHHHHHHHcCCCcH--HHHHHHHH
Confidence 11 12332234588999986 7775 7888888877664311111111 123556555555444322 33456677
Q ss_pred HHHHHHHHHHHHHHHhcCCceE------------EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEec
Q 015230 312 KITGELTQGIIDAGKKAGHAIC------------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA 379 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~~~~~~~~------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 379 (411)
++..++.+.|++. |.+.. ..+.|.++.|++.+ ......++.+.|+..++.++
T Consensus 266 ~~a~~la~~L~~~----p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~------------~~~~~~~f~~~l~~~~~~~s 329 (386)
T PRK06767 266 DNAEKIVSFLKNH----DAVEGVWYPEGELASRQMKRGGGVISFSIKG------------GKEETQAFINDLHFITIAVS 329 (386)
T ss_pred HHHHHHHHHHHcC----CCccEEECCCcHHHHHhCCCCCceEEEEEcC------------CHHHHHHHHHhCCccEEecC
Confidence 7888888887765 32221 22457888998842 22345788899888888877
Q ss_pred cCCCcc---------------------------eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 380 PSQFEA---------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 380 ~~~~~~---------------------------~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
-|+... +|+ +.--|+.+.+++-|.++++.
T Consensus 330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~--svGlE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRL--SVGLESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEE--EeccCCHHHHHHHHHHHHhh
Confidence 765332 222 22335677888888887764
No 260
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.7e-17 Score=138.80 Aligned_cols=307 Identities=13% Similarity=0.156 Sum_probs=189.0
Q ss_pred CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhc--cCCcE--EEEEeCCcCCCchhhhhhcCCCCc
Q 015230 72 GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF--TGRER--IIKFEGCYHGHADPFLVKAGSGVA 144 (411)
Q Consensus 72 ~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~--~~~~~--vi~~~~~~~~~~~~~~~~~g~~~~ 144 (411)
++...+.+.+++.+.+.++ ..+++.+|||...+...+.-+.... .+..+ ++-..+.|-|..+.-+.- . ..
T Consensus 74 QG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~--d-~f 150 (417)
T COG3977 74 QGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEE--D-LF 150 (417)
T ss_pred cchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCc--c-ce
Confidence 3447778999999999997 4789999999999888877643222 22222 333455666643322110 0 00
Q ss_pred ccCCCCCCCCCCCCCCceeecC-CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 145 TLGLPDSPGVPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~-~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+-..|-..-.+ --.++ +-|.+.++- .+++.+|++.-..|++|.+-.++| +.+|.++++.||++|++|
T Consensus 151 Vs~kP~iel~~------~g~FKY~vDF~~l~i-----~e~~g~ic~SRPtNPTGNVlTdeE-~~kldalA~~~giPliID 218 (417)
T COG3977 151 VSAKPNIELLP------AGQFKYHVDFEHLHI-----GESTGAICVSRPTNPTGNVLTDEE-LAKLDALARQHGIPLIID 218 (417)
T ss_pred eeccCCccccc------ccceeeccCHHHccc-----ccccceEEecCCCCCCCCcccHHH-HHHHHHHhhhcCCcEEEe
Confidence 00001000000 00011 116666542 247888888765555555443333 999999999999999999
Q ss_pred cccccc-ccccCcccccc-CCCcc---hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHH
Q 015230 224 EVMTGF-RLAYGGAQEYF-GVTPD---LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 298 (411)
Q Consensus 224 e~~~g~-~~g~~~~~~~~-~~~~d---~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l 298 (411)
.+|. . .++-.|. +.. -..++ ..|+||.=-.|.|.|.+++++++++.+..+.... +..+..+..|.+...+
T Consensus 219 nAYg-~PFP~iifs-d~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~ii---sLap~~~G~Aia~~mi 293 (417)
T COG3977 219 NAYG-VPFPGIIFS-DATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGII---SLAPGRMGPAIAAEMI 293 (417)
T ss_pred cccC-CCCCceecc-cccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhcccee---eecCCCccHHHHHHHh
Confidence 9994 3 2332221 111 11233 3467885446889999999999999987544322 3333334444444444
Q ss_pred HH-----HhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH
Q 015230 299 KR-----LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 373 (411)
Q Consensus 299 ~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 373 (411)
+. +.+.-++.-++++.+.....|+.....+++..+......|+|+-+.+.++++ .++++.|+.
T Consensus 294 e~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt------------~~LYq~LKa 361 (417)
T COG3977 294 ESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITT------------EELYQRLKA 361 (417)
T ss_pred hcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCH------------HHHHHHHHh
Confidence 31 1112223335555555555666555555665555555668888887766655 899999999
Q ss_pred cCeEeccCCCc-------------ceeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 374 EGVYFAPSQFE-------------AGFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 374 ~Gi~v~~~~~~-------------~~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+|+++.|+.+. ++|++...+++.+++++.+|.+.+.+
T Consensus 362 ~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~ 411 (417)
T COG3977 362 RGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVER 411 (417)
T ss_pred CeEEEecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999998532 27889999999999999999887654
No 261
>PRK14012 cysteine desulfurase; Provisional
Probab=99.80 E-value=2.2e-17 Score=157.01 Aligned_cols=256 Identities=18% Similarity=0.143 Sum_probs=153.3
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHH--cCCCCCCC---------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMK--KGTSFGAP---------CLLENVLAEMVISAVP-SIEMVRFVNSGTEA 104 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~--~~~~~~~~---------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a 104 (411)
.|+|..+. +..++.+.+++.+.+. ........ .+..+++.+.+++.++ .++++++++|++++
T Consensus 5 iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~a 78 (404)
T PRK14012 5 IYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATES 78 (404)
T ss_pred EEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHHH
Confidence 45664443 2367889999988886 21111110 1345667788888887 56889999999999
Q ss_pred HHHHHHHHHh--ccCCcEEEEEeCCcCCCchhhhhh--cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 105 CMGVLRLARA--FTGRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 105 ~~~al~~~~~--~~~~~~vi~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
+..++..+.. ..+++.|++.+..|+........+ .|..+..++... .+.. |++++++.++
T Consensus 79 l~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~~-------------d~~~l~~~i~-- 142 (404)
T PRK14012 79 DNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS-NGII-------------DLEKLEAAMR-- 142 (404)
T ss_pred HHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC-CCcC-------------CHHHHHHhcC--
Confidence 9999875432 245667777777776543333222 244333333221 1111 8899999886
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccCCcc
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLP 258 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~ 258 (411)
++++++++..+++++|.+.+ +++|.++|++||+++|+|++|+ .|.. ..+.....+|++ ++.|.++++ .
T Consensus 143 -~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~---~g~~-~~~~~~~~~D~~~~s~~K~~gp~-g 212 (404)
T PRK14012 143 -DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS---VGKV-PIDLSKLKVDLMSFSAHKIYGPK-G 212 (404)
T ss_pred -CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh---cCCc-ccCcccCCCCEEEEehhhccCCC-c
Confidence 35678888888888999998 9999999999999999999997 2211 111112346665 455976532 4
Q ss_pred cccccccHHHHHHhcCCCCc--cc--ccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHH
Q 015230 259 VGAYGGRRDIMEMVAPAGPM--YQ--AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 259 ~g~~~~~~~~~~~~~~~~~~--~~--~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~ 324 (411)
+|+++.+++....+.+.... .. ....+.+........++++..+. ++..++.+++.+++.+.|+++
T Consensus 213 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 284 (404)
T PRK14012 213 IGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKDI 284 (404)
T ss_pred eEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 78887776543333210000 00 00112233333333345554433 334555666666666666553
No 262
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=1.8e-17 Score=155.68 Aligned_cols=308 Identities=10% Similarity=0.016 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh
Q 015230 55 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 134 (411)
Q Consensus 55 ~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 134 (411)
++..+++.+.++.+..+ +.....+++.+++++.+ +.+++++++||++|+..++.++ ...+++.|++..++|.+...
T Consensus 11 ~~~~~~~~~~l~~~~~~-g~~~~~~~~e~~la~~~-g~~~~v~~~sgt~al~~~l~~~-~~~~Gd~Viv~~~t~~~~~~- 86 (375)
T PRK11706 11 GTELDYIQQAMSSGKLC-GDGGFTRRCQQWLEQRF-GSAKVLLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTAN- 86 (375)
T ss_pred HHHHHHHHHHHHcCCcc-CCCHHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHh-CCCCCCEEEECCCCcHHHHH-
Confidence 34567788888875432 24566788888888887 5679999999999999887643 34567889998888886543
Q ss_pred hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHH
Q 015230 135 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 214 (411)
Q Consensus 135 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~ 214 (411)
+....|..+..++.... ++. .|++++++.++. ++++|++.. ..|...+ +++|.++|+
T Consensus 87 ~~~~~G~~~v~~d~d~~-~~~------------~d~~~le~~i~~---~tk~i~~~~---~~G~~~~----~~~i~~la~ 143 (375)
T PRK11706 87 AFVLRGAKIVFVDIRPD-TMN------------IDETLIEAAITP---KTRAIVPVH---YAGVACE----MDTIMALAK 143 (375)
T ss_pred HHHHcCCEEEEEecCCC-cCC------------cCHHHHHHhcCC---CCeEEEEeC---CCCCccC----HHHHHHHHH
Confidence 33444554444333211 111 178999988863 456666432 3566666 999999999
Q ss_pred HhCCEEEEecccccc-ccccCccccccCCCcchhhhh----hhccCCcccccccccHHHHHHhcCCCC------c-----
Q 015230 215 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRRDIMEMVAPAGP------M----- 278 (411)
Q Consensus 215 ~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~s----K~~~~G~~~g~~~~~~~~~~~~~~~~~------~----- 278 (411)
+||++||+|++|+-. ..+.. ..+-..|+.+|| |.++.|.+.+++..++++.+.++.... .
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~~----~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 219 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKGR----ALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQ 219 (375)
T ss_pred HcCCEEEEECccccccccCCe----eeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC
Confidence 999999999999722 21111 112223666666 999866666666767777764432110 0
Q ss_pred -------ccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH----hcCCc-eEEeeecceEEEEEe
Q 015230 279 -------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAGHA-ICGGYISGMFGFFFT 346 (411)
Q Consensus 279 -------~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~-~~~~~~g~~~~~~~~ 346 (411)
..+.++..+.+.++.+...++.+ ++..++.+++.+++.+.|..+.. ..+.. ........++++.+.
T Consensus 220 ~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 220 VDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR 297 (375)
T ss_pred CCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence 01223334556666666666554 44556666666677676665420 00100 000111224444442
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----------------C-c---------ceeee--cCCCHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------------F-E---------AGFTS--LAHSSDDIQ 398 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----------------~-~---------~~~~~--~~~t~~~i~ 398 (411)
+ .....++.+.|.++||.+.... . . .+.+| ...+++|++
T Consensus 298 ~-------------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~ 364 (375)
T PRK11706 298 D-------------LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQR 364 (375)
T ss_pred C-------------cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHH
Confidence 1 1234789999999999864220 0 0 13444 346899999
Q ss_pred HHHHHHHHHH
Q 015230 399 HTITAAEKVL 408 (411)
Q Consensus 399 ~~i~~l~~~~ 408 (411)
..++.|++++
T Consensus 365 ~i~~~i~~~~ 374 (375)
T PRK11706 365 TVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHh
Confidence 9999999865
No 263
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.79 E-value=6.8e-17 Score=137.91 Aligned_cols=310 Identities=11% Similarity=0.082 Sum_probs=206.0
Q ss_pred cccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEe
Q 015230 48 AIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 125 (411)
Q Consensus 48 ~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~ 125 (411)
+.+||.||++.+-+.+.++. +...+. ...-+++..+|+.+.+.|+.- ...+++.++++.
T Consensus 39 ~~lgh~sPe~~qIm~~v~eg-----------------ikyVFkT~n~~tf~isgsGh~g~E~al~N--~lePgd~vLv~~ 99 (385)
T KOG2862|consen 39 PSLGHMSPEFVQIMDEVLEG-----------------IKYVFKTANAQTFVISGSGHSGWEAALVN--LLEPGDNVLVVS 99 (385)
T ss_pred CccccCCHHHHHHHHHHHHH-----------------HHHHhccCCCceEEEecCCcchHHHHHHh--hcCCCCeEEEEE
Confidence 45666666655544444333 333443 345677888999999999975 345777888777
Q ss_pred CCcCCCchhhh-hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHH
Q 015230 126 GCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 204 (411)
Q Consensus 126 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~ 204 (411)
.+-.+....-+ ...|.++++++.+....+ .++.+.+.+.++ ++.+|++..+.+++|+.++-
T Consensus 100 ~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~--------------~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~-- 161 (385)
T KOG2862|consen 100 TGTWGQRAADCARRYGAEVDVVEADIGQAV--------------PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDL-- 161 (385)
T ss_pred echHHHHHHHHHHhhCceeeEEecCcccCc--------------cHHHHHHHHHhc--CCceEEEEecCccccccchH--
Confidence 66555433332 334667777655555554 689999999976 78899999999999998872
Q ss_pred HHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCC----ccc
Q 015230 205 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP----MYQ 280 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~----~~~ 280 (411)
++.+.++|++|++++++|.+-+ -.|..|.+|.|+++.......|++++---++.+..+++..+.++..+. .++
T Consensus 162 -~~~~g~lc~k~~~lllVD~VaS--lggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yF 238 (385)
T KOG2862|consen 162 -LAISGELCHKHEALLLVDTVAS--LGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYF 238 (385)
T ss_pred -HHHHHHHhhcCCeEEEEechhh--cCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEE
Confidence 5667789999999999998886 234678899999977677788999851114447778888877764332 110
Q ss_pred -----c-----------cCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceE
Q 015230 281 -----A-----------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 341 (411)
Q Consensus 281 -----~-----------~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~ 341 (411)
. ...+.+........++|+.+.+ ++..++.+++.++++..|+++.-+ .
T Consensus 239 d~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq-------------~ 305 (385)
T KOG2862|consen 239 DILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQ-------------L 305 (385)
T ss_pred eHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-------------c
Confidence 0 0124455556666777776554 677788999999999999987322 1
Q ss_pred EEEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCC----Ccceee---ecCCCHHHHHHHHHHHHHHHHh
Q 015230 342 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFT---SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~----~~~~~~---~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+..-...........+.|...+..++...+..+ ++.+..+- ...+|| ..+.+.+.++..++.|..++.+
T Consensus 306 fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 306 FVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 111111111111222346666778999999999 44444432 233677 3456889999999999988764
No 264
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=1.5e-17 Score=146.05 Aligned_cols=348 Identities=18% Similarity=0.237 Sum_probs=228.1
Q ss_pred eEEEeecCcEEEecCCCEEEeccCCccccccCC-CcHHHHHHHHHHHHcC-CCC------CCCCHHHHHHHHHHHhhCCC
Q 015230 20 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPS 91 (411)
Q Consensus 20 ~~~~~~~g~~~~~~~g~~~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~-~~~------~~~~~~~~~l~~~l~~~~~~ 91 (411)
.++.+..+..++ .||+.+++|.+. |++|+ .++++++.+...+++. .+. .++-+.+..+.+.+++-.+-
T Consensus 79 ~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~ 154 (467)
T KOG1358|consen 79 PVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT 154 (467)
T ss_pred cccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC
Confidence 446666677776 899999999999 99999 8999999999999993 332 33455566666777666655
Q ss_pred CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHH
Q 015230 92 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS 171 (411)
Q Consensus 92 ~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 171 (411)
.+.+++.. |-.++..++. ++.++++|++.+...+......+.+ ....+..+.|||++
T Consensus 155 E~aivYs~-gF~ti~S~ip---afsKrGDIi~~de~~nfaIq~Glql-------------------SRS~i~~Fkhndm~ 211 (467)
T KOG1358|consen 155 EDAIVYSY-GFSTIESAIP---AFSKRGDIIFVDEAVNFAIQKGLQL-------------------SRSTISYFKHNDME 211 (467)
T ss_pred cceeeecc-ccchhhhcch---hhhccCcEEEEehhhhHHHHHHHhh-------------------hhheeEEecCCCHH
Confidence 56666655 7778888887 7788888888777655321111111 22357778999999
Q ss_pred HHHHHHHcCC-------C---cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc--ccccCcccc
Q 015230 172 ALENLFENNK-------G---EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQE 238 (411)
Q Consensus 172 ~l~~~~~~~~-------~---~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~--~~g~~~~~~ 238 (411)
++++.+.+.. . ..+.+++|....|+|.+.| +.+|.++..||+..+|.||.++ |. ++| .+..+
T Consensus 212 ~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~G-rGvte 286 (467)
T KOG1358|consen 212 DLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTG-RGVTE 286 (467)
T ss_pred HHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccC-ccccc
Confidence 9988776421 1 1567899999999999999 9999999999999999999996 55 444 34566
Q ss_pred ccCCC---cchhh--hhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-CChHHHHHH
Q 015230 239 YFGVT---PDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNK 312 (411)
Q Consensus 239 ~~~~~---~d~~~--~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~ 312 (411)
|+++. .|+++ +.-++++| -|+.+++.-+++.-+-....+.+ +-..+|....++..++++++. ++..+.++.
T Consensus 287 H~~v~~~~iDiv~~sm~~alas~--GgFc~G~~~i~~hQrLSg~~Y~f-SAslPp~la~aa~~ai~i~~~~p~~~~~L~~ 363 (467)
T KOG1358|consen 287 HFGVPITDIDIVTASMETALASG--GGFCAGKSFIADHQRLSGSGYCF-SASLPPYLAGAAIKAILIEEWNPEIVQPLRA 363 (467)
T ss_pred cCCCCccceeeeeeccccccccc--CceeecceeeEeeeeccccceee-eccCchhhhhhHHHHHHHHhhCcchhhhhhc
Confidence 77765 35554 44566631 23334433332222211223333 445566777777778877766 677777888
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----------
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------- 382 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------- 382 (411)
....+...|+... ++...-.....++-+.+.....+- ..+....+++.+.+..+|+.+....
T Consensus 364 k~~~~H~~l~~~s---~~~v~~~~~SPi~hl~l~~~~~s~-----e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~ 435 (467)
T KOG1358|consen 364 KVAKFHAALSSNS---GFIVSGSPESPIIHLQLERSYGSR-----EKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPI 435 (467)
T ss_pred cccccchhhhcCC---ceEEecCcCCceeeeeecccccch-----HHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCC
Confidence 7777777776531 111111223444444443321110 1222345677777777788886652
Q ss_pred Ccceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 383 FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 383 ~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+.+|+ +..+++++++++.+.|++....
T Consensus 436 ~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 436 PPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 123444 6888999999999999987654
No 265
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.78 E-value=2e-17 Score=154.72 Aligned_cols=303 Identities=14% Similarity=0.063 Sum_probs=180.6
Q ss_pred cCCCcHHHHHHHHHHHHcCCCCCC--C-------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc--cC
Q 015230 50 IGHADDQVLAALGETMKKGTSFGA--P-------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TG 117 (411)
Q Consensus 50 ~g~~~~~v~~a~~~~l~~~~~~~~--~-------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~--~~ 117 (411)
.+..++.+++++.+.+........ . .+..+++.+++++.++ .+++++|++|+++++..+++..... .+
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~ 86 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQK 86 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccC
Confidence 344788999999998865221111 1 1335678888888887 6789999999999999988754322 12
Q ss_pred C-cEEEEEeCCcCCCchhhhhh--cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 118 R-ERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 118 ~-~~vi~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
+ +.|++....++........+ .|..+..++......+ |++++++.++ +++++++++.+++
T Consensus 87 g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~~~~--------------d~~~l~~~l~---~~~~lv~~~~~~n 149 (353)
T TIGR03235 87 GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDESGRI--------------DVDELADAIR---PDTLLVSIMHVNN 149 (353)
T ss_pred CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCCCcC--------------CHHHHHHhCC---CCCEEEEEEcccC
Confidence 3 45555554444332222222 2333333332211111 7899988886 3568888888888
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchh--hhhhhccCCcccccccccHHHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEM 271 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~ 271 (411)
++|.+.+ +++|.++|++||+++++|++|+ .|. .+..+.+ .+|++ +..|+++. ..+|+++.+++....
T Consensus 150 ~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~---~g~~~~~~~~~--~~D~~~~s~~K~~gp-~g~g~l~~~~~~~~~ 219 (353)
T TIGR03235 150 ETGSIQP----IREIAEVLEAHEAFFHVDAAQV---VGKITVDLSAD--RIDLISCSGHKIYGP-KGIGALVIRKRGKPK 219 (353)
T ss_pred CceeccC----HHHHHHHHHHcCCEEEEEchhh---cCCcccccccc--CCCEEEeehhhcCCC-CceEEEEEccCcccc
Confidence 9999998 9999999999999999999996 221 1112222 35655 55698652 127888887764322
Q ss_pred hcCCCCccc-------ccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCceE--E-eeecc
Q 015230 272 VAPAGPMYQ-------AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAIC--G-GYISG 339 (411)
Q Consensus 272 ~~~~~~~~~-------~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~-~~~g~ 339 (411)
.. ..+.+. ....+.+.....+..++++.+.. ++..++++++.+++++.|++. ++... . .....
T Consensus 220 ~~-~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~----g~~~~~~~~~~~~~ 294 (353)
T TIGR03235 220 AP-LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL----GVKLNGDPAETIPH 294 (353)
T ss_pred cc-cCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC----CeEEeCCcccccCC
Confidence 11 111111 11234555666666677776643 455667777777777777552 22111 1 11122
Q ss_pred eEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCc--------ceeeecCCCHHHHHH
Q 015230 340 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE--------AGFTSLAHSSDDIQH 399 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~--------~~~~~~~~t~~~i~~ 399 (411)
++.+.+. ..+.+++.+.|.+ +|.+.++..+ .++..++.+++++..
T Consensus 295 i~~~~~~--------------~~~~~~v~~~L~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 347 (353)
T TIGR03235 295 ILNFSID--------------GVNSEALIVNLRA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARG 347 (353)
T ss_pred EEEEEeC--------------CcCHHHHHHHHhC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCc
Confidence 3444331 1223678888865 8999887432 134456666665544
No 266
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=6.4e-17 Score=134.67 Aligned_cols=323 Identities=15% Similarity=0.131 Sum_probs=189.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~ 112 (411)
-|+.++.+..+ .+.-..+|+-.+ - .+.++.....++...+.+.-| ..|.++...|..|.++..|+..
T Consensus 39 ~G~~iv~ld~~---e~~ryPdP~q~e-------f--k~~~~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~ 106 (375)
T KOG0633|consen 39 LGRDIVKLDAN---ENPRYPDPEQME-------F--KYVYPDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCV 106 (375)
T ss_pred cCCCceEeccc---cCCCCcCHHHcc-------c--ccccCCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhhe
Confidence 46666665555 332235664421 1 233344444555555555555 7899999999999999999853
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEccc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~ 192 (411)
.-+++++|+..+|+|......+ ..-+.++...+. .+.+.. +.+.+.+.++.. +.++.+++.+.
T Consensus 107 -c~PGkeKIl~cPPtysMY~v~A-~iNd~eVvkvpl--~pdF~l------------nvdai~evl~~d-s~iK~~F~tSP 169 (375)
T KOG0633|consen 107 -CDPGKEKILDCPPTYSMYVVDA-AINDAEVVKVPL--NPDFSL------------NVDAIAEVLELD-SKIKCIFLTSP 169 (375)
T ss_pred -ecCCccceeecCCcceeEEEEe-ecCCceEEEecC--CCCccc------------cHHHHHHHHhcc-ccceEEEEcCC
Confidence 3356789999999998543322 222333333222 222211 788888888864 46776666665
Q ss_pred CCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcch---hhhhhhcc-CCcccccccccHH
Q 015230 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL---TTLGKIIG-GGLPVGAYGGRRD 267 (411)
Q Consensus 193 ~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~---~~~sK~~~-~G~~~g~~~~~~~ 267 (411)
.|++|.+..+.+ +.+|.+.-. ++++++||+|.+| ..+.. +.+-.-.|++ -||||+|| +|+|+|+...+..
T Consensus 170 gNPtg~~ik~~d-i~KiLe~p~--nglVVvDEAYidFsg~~S~--~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ 244 (375)
T KOG0633|consen 170 GNPTGSIIKEDD-ILKILEMPD--NGLVVVDEAYIDFSGVESR--MKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLS 244 (375)
T ss_pred CCCCcccccHHH-HHHHHhCCC--CcEEEEeeeeEeecccccc--chHhHhCCceeehhhhhhhcCcceeEeecccccHH
Confidence 556666655222 555555444 7899999999988 43321 2122223443 38999999 8999999999999
Q ss_pred HHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEee--ecceEEEEE
Q 015230 268 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY--ISGMFGFFF 345 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~g~~~~~~~ 345 (411)
+++.+...+. +++.+..+..+|++++..- .-+-.+..+....+-+.+|-+.....+...+..+ ..+|+.+++
T Consensus 245 ia~iln~~Ka-----PYNiS~~~s~~AL~Als~~-n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v 318 (375)
T KOG0633|consen 245 IAEILNRAKA-----PYNISVAGSVAALAALSDS-NGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEV 318 (375)
T ss_pred HHHHHHhccC-----CccccchhHHHHHHhcCcc-cchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEE
Confidence 9998876554 3444455555555555311 0111222333333333344333333344332222 345677777
Q ss_pred ecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-----cceeeecCCCHHHHHHHHHHHHHH
Q 015230 346 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-----~~~~~~~~~t~~~i~~~i~~l~~~ 407 (411)
.+. +.+.....+.+.+...||.|+..+. +.+|+... |+|+.+.+++.|++.
T Consensus 319 ~~~----------~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG-t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 319 TGG----------DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG-TPEENTVLMKCLKQF 374 (375)
T ss_pred cCC----------CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC-CcccchHHHHHHHhh
Confidence 542 1223334445555667999987542 34677654 667788888888765
No 267
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.78 E-value=2.1e-16 Score=152.44 Aligned_cols=277 Identities=18% Similarity=0.181 Sum_probs=165.5
Q ss_pred HHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh----cCCCCcccCCCCCCCCC
Q 015230 81 LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK----AGSGVATLGLPDSPGVP 155 (411)
Q Consensus 81 l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~ 155 (411)
+.+++++.++ ..+++.+++||+++++.++... ...++++|++.++.|+. ....+.. .|..+..++.... ..
T Consensus 117 ~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~-~~~~g~~Vlv~~~~~~~-~~~~~~~~~~~~G~~~~~v~~~~~-~~- 192 (447)
T PRK00451 117 YQTMICELTGMDVANASMYDGATALAEAALMAV-RITKRKKVLVSGAVHPE-YREVLKTYLKGQGIEVVEVPYEDG-VT- 192 (447)
T ss_pred HHHHHHHHhCCCcceEEecCcHHHHHHHHHHHH-HhcCCCEEEEeCccCHH-HHHHHHHHHHhCCcEEEEecCCCC-CC-
Confidence 3366688887 6678999999999888877532 33466778887766553 3333322 3444444333211 11
Q ss_pred CCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE--ecccccccccc
Q 015230 156 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLAY 233 (411)
Q Consensus 156 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~--De~~~g~~~g~ 233 (411)
|++++++.++ +++++++++.. +++|.+.+ +++|.++|+++|+++++ |.+..|+
T Consensus 193 -------------d~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~---- 247 (447)
T PRK00451 193 -------------DLEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL---- 247 (447)
T ss_pred -------------CHHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc----
Confidence 8899998886 35777777665 56888887 99999999999999988 5444332
Q ss_pred CccccccCCCcchh-----hhhhhcc-CCcccccccccHHHHHHhcCC----------C-------------CcccccCC
Q 015230 234 GGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA----------G-------------PMYQAGTL 284 (411)
Q Consensus 234 ~~~~~~~~~~~d~~-----~~sK~~~-~G~~~g~~~~~~~~~~~~~~~----------~-------------~~~~~~t~ 284 (411)
......+ ..|++ ++||.+. +|+++|++++++++++.+... . ..+...+.
T Consensus 248 ~~~~~~~--~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (447)
T PRK00451 248 LKPPGEY--GADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATS 325 (447)
T ss_pred CCCcccC--CCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccc
Confidence 1111122 33443 5677766 678899999999888875210 0 00011111
Q ss_pred C--CCHHHH-HHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEE--EEEecCCCCCcchh
Q 015230 285 S--GNPLAM-TAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFG--FFFTEGPVYNFEDA 356 (411)
Q Consensus 285 ~--~~~~~~-a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~ 356 (411)
+ .+...+ .++..+++.+.+ ++..+++.++.++++++|+++ +..... ....+.. +.+.
T Consensus 326 ~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~----~g~~~~-~~~~~~~~~v~~~---------- 390 (447)
T PRK00451 326 NICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEI----GGVELF-DGPFFNEFVVRLP---------- 390 (447)
T ss_pred cccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhc----CCEEec-CCCeEEEEEEecC----------
Confidence 1 111111 222223333322 566677888888888887765 322111 2122222 2221
Q ss_pred cccchHHHHHHHHHHHHcCeEecc-C---C---Ccceeeec--CCCHHHHHHHHHHHHHHH
Q 015230 357 KKSETTKFARFYRGMLEEGVYFAP-S---Q---FEAGFTSL--AHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 357 ~~~~~~~~~~~~~~l~~~Gi~v~~-~---~---~~~~~~~~--~~t~~~i~~~i~~l~~~~ 408 (411)
....++.+.|.++|+.+.. + . .+.+|++. ..|+++++++++.|++++
T Consensus 391 -----~~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 -----KPAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred -----CCHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0126789999999887421 1 1 12456643 689999999999998765
No 268
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.78 E-value=1.9e-16 Score=148.64 Aligned_cols=316 Identities=17% Similarity=0.137 Sum_probs=184.3
Q ss_pred CcHHHHHHHHHHHHcCC--C-----C-C---CCCHHHHHHHHHHHhhCCCCCEE-EEeCChHHHHHHHHHHHHhc-----
Q 015230 53 ADDQVLAALGETMKKGT--S-----F-G---APCLLENVLAEMVISAVPSIEMV-RFVNSGTEACMGVLRLARAF----- 115 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~--~-----~-~---~~~~~~~~l~~~l~~~~~~~~~v-~~~~~g~~a~~~al~~~~~~----- 115 (411)
.+|.+++++...+.+-- + | + +.++.+....++..+.++ .+.+ +-..||+.|+.+++......
T Consensus 61 ~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~-a~~anvqp~Sg~~An~~v~~all~~~~~~p 139 (493)
T PRK13580 61 SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG-AEHAYVQPHSGADANLVAFWAILAHKVESP 139 (493)
T ss_pred CCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC-CCcccccCCCcHHHHHHHHHHHhcccccCc
Confidence 57778887777766611 1 1 1 124555555666666775 3322 34458999999988754321
Q ss_pred ----c--------------------CCcEEEEEeCCcCCCchhh--hhhcCC--CCcccCCCCCCCCCCCCCCceeecCC
Q 015230 116 ----T--------------------GRERIIKFEGCYHGHADPF--LVKAGS--GVATLGLPDSPGVPKGATYETLTAPF 167 (411)
Q Consensus 116 ----~--------------------~~~~vi~~~~~~~~~~~~~--~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (411)
. ++++|+..+...-|+..-. ....+. .....++....+.
T Consensus 140 ~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~------------- 206 (493)
T PRK13580 140 ALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGL------------- 206 (493)
T ss_pred chhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCc-------------
Confidence 0 1578888766554332111 001111 0111111111111
Q ss_pred CCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-ccccccCccccccC-CCcc
Q 015230 168 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFG-VTPD 245 (411)
Q Consensus 168 ~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~~~~~~~~~-~~~d 245 (411)
-|++++++.++.. ++ .+++....+.++ ..| +++|+++|++||+++++|++|+ |+..+.....+... ...|
T Consensus 207 iD~d~l~~~~~~~--~p-lvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D 278 (493)
T PRK13580 207 LDYDEIAALAREF--KP-LILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHAD 278 (493)
T ss_pred cCHHHHHHHHhhc--CC-EEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCc
Confidence 1899999998843 34 444444444444 556 9999999999999999999996 66212221100000 1245
Q ss_pred --hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHH
Q 015230 246 --LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQG 320 (411)
Q Consensus 246 --~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~ 320 (411)
+.|++|++.|. +.|++++++++++.+....+...+ + ..++ ..++...++..+.. ++.++++.++.+++++.
T Consensus 279 ~vtgT~hKaL~GP-~GG~I~~~~~l~~~L~~a~P~i~g-g-~l~p-~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~ 354 (493)
T PRK13580 279 IVTTTTHKTLRGP-RGGLVLAKKEYADAVDKGCPLVLG-G-PLPH-VMAAKAVALAEARTPEFQKYAQQVVDNARALAEG 354 (493)
T ss_pred EEEeCChhhccCC-CeEEEEecHHHHHHHhhCCCcccC-C-CccH-HHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 45889999641 356778899988888644443333 2 2233 33333334444433 34788999999999999
Q ss_pred HHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----------cceeee-
Q 015230 321 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFTS- 389 (411)
Q Consensus 321 l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----------~~~~~~- 389 (411)
|++.+.. ... ......++.+++.+ .......+.+.|.+.||++.+... ..+|+.
T Consensus 355 L~~~G~~--vv~-ggTdshIV~V~lg~------------~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 355 FLKRGAR--LVT-GGTDNHLVLIDVTS------------FGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHhcCCC--ccC-CCCCCCEEEEEeCC------------HHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 9887321 111 01235677887743 122335677899999999975432 235663
Q ss_pred -c----CCCHHHHHHHHHHHHHHHH
Q 015230 390 -L----AHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 390 -~----~~t~~~i~~~i~~l~~~~~ 409 (411)
. .++++|++++.+.|.++++
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~ 444 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLS 444 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHH
Confidence 3 5579999999999998875
No 269
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.77 E-value=6.3e-17 Score=151.45 Aligned_cols=299 Identities=15% Similarity=0.090 Sum_probs=182.3
Q ss_pred HHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh
Q 015230 59 AALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 138 (411)
Q Consensus 59 ~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~ 138 (411)
+++.+.+..... +......++.+.+++.++ .+++++++||++|+..+++.+ ...+++.|++...+|++.... ...
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~~-~~~~~~~~sgt~al~~~l~~l-~~~~gd~vl~~~~~~~~~~~~-~~~ 77 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYLG-VKYAVAVSSGTAALHLALRAL-GIGPGDEVIVPSFTFVATANA-ILL 77 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHHHH-HHH
Confidence 566677776432 334566778888888775 568899999999999999754 234567899988888865433 333
Q ss_pred cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCC
Q 015230 139 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 218 (411)
Q Consensus 139 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~ 218 (411)
.|..+...+....... .|++++++.++ +++++|++++ ..|...+ +++|.++|++||+
T Consensus 78 ~g~~~~~~~~~~~~~~-------------~d~~~l~~~i~---~~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~i 134 (352)
T cd00616 78 LGATPVFVDIDPDTYN-------------IDPELIEAAIT---PRTKAIIPVH---LYGNPAD----MDAIMAIAKRHGL 134 (352)
T ss_pred cCCeEEEEecCCCcCC-------------cCHHHHHHhcC---cCCeEEEEEC---CCCCcCC----HHHHHHHHHHcCC
Confidence 4444444332211110 17889988875 3567777653 3577767 9999999999999
Q ss_pred EEEEecccc-cc-ccccCccccccCCCcchh--hhh--hhccCCccccccccc-HHHHHHhcCC---CCc---------c
Q 015230 219 LLIFDEVMT-GF-RLAYGGAQEYFGVTPDLT--TLG--KIIGGGLPVGAYGGR-RDIMEMVAPA---GPM---------Y 279 (411)
Q Consensus 219 ~li~De~~~-g~-~~g~~~~~~~~~~~~d~~--~~s--K~~~~G~~~g~~~~~-~~~~~~~~~~---~~~---------~ 279 (411)
++|+|++|+ |. ..+. ..+...|+. |++ |++++| +.|+++.+ +++.+.+... ... .
T Consensus 135 ~li~D~a~~~g~~~~~~-----~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd00616 135 PVIEDAAQALGATYKGR-----KVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEI 208 (352)
T ss_pred eEEEECCCCCCCeECCE-----EcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccce
Confidence 999999997 32 1111 112223444 444 999533 46667654 5666654321 000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEe---eecceEEEEEecCCCCCcchh
Q 015230 280 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDA 356 (411)
Q Consensus 280 ~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~ 356 (411)
.+.++..+++.++.+...++.+ ++..++.+++.+++++.|+++. ......... ....++.+.+...
T Consensus 209 ~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 277 (352)
T cd00616 209 LGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPE-------- 277 (352)
T ss_pred eeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCc--------
Confidence 1123355667777666655544 4566777888888888887641 111111111 1234555555320
Q ss_pred cccchHHHHHHHHHHHHcCeEeccCCC---------------------------cceeee--cCCCHHHHHHHHHHHH
Q 015230 357 KKSETTKFARFYRGMLEEGVYFAPSQF---------------------------EAGFTS--LAHSSDDIQHTITAAE 405 (411)
Q Consensus 357 ~~~~~~~~~~~~~~l~~~Gi~v~~~~~---------------------------~~~~~~--~~~t~~~i~~~i~~l~ 405 (411)
......++.+.|.++||.+..... ..+++| ...|++|++.++++|+
T Consensus 278 ---~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 278 ---AGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ---CCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 012236899999999997653211 135664 5579999999999874
No 270
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.77 E-value=9.6e-17 Score=151.21 Aligned_cols=234 Identities=14% Similarity=0.064 Sum_probs=153.0
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.....+++.+.+++..+ .+++++++||+.|+..++... ..+++.|++....|.+.+.......
T Consensus 68 ~~p~~~~le~~lA~l~g-~~~al~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~~~~t~~~~~~~~-------------- 130 (403)
T PRK07810 68 GNPTVSMFEERLRLIEG-AEACFATASGMSAVFTALGAL--LGAGDRLVAARSLFGSCFVVCNEIL-------------- 130 (403)
T ss_pred CCchHHHHHHHHHHHhC-CCcEEEECChHHHHHHHHHHH--hCCCCEEEEccCCcchHHHHHHHHH--------------
Confidence 45556788888888885 558888899999999988643 3466777777655544332211110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-ccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 232 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g 232 (411)
...+..+..++..|+++++++++ +++++|++|.++|++|.+.+ +++|.++|+++|+++|+|++|+ ++...
T Consensus 131 --~~~G~~v~~vd~~d~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~~ 201 (403)
T PRK07810 131 --PRWGVETVFVDGEDLSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATPLLQR 201 (403)
T ss_pred --HHcCcEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 01122444555568999999886 35788999988888898888 9999999999999999999996 22111
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccc-ccccccHHHHH-HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~-G~~~-g~~~~~~~~~~-~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
. . .++.+.-+.+++|.++| |.++ |+++++++.+. .++. .........+++.++.+...++.+ +...++
T Consensus 202 ~---~-~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~---~~~~~g~~~s~~~a~l~l~~L~tl--~~R~~~ 272 (403)
T PRK07810 202 G---L-PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---LMRHTGPALSAFNAWVLLKGLETL--ALRVRH 272 (403)
T ss_pred h---h-hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 1 1 12333334578999986 7776 66777776554 2331 111123356778777777766644 444566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceE------------------EeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~ 346 (411)
..++..++.+.|++. |.+.. ..+.|.++.|++.
T Consensus 273 ~~~~a~~~a~~L~~~----p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~ 323 (403)
T PRK07810 273 SNASALRIAEFLEGH----PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELD 323 (403)
T ss_pred HHHHHHHHHHHHhcC----CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 677777777777654 22111 1256889999985
No 271
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.77 E-value=3.5e-17 Score=154.46 Aligned_cols=265 Identities=13% Similarity=0.054 Sum_probs=168.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
+..-..+|.+.+++.++ .+.+++++||+.|+..++.. ...+++.|++..+.|...........
T Consensus 62 ~~p~~~~Le~~iA~~~g-~~~~l~~~sG~~Ai~~al~~--ll~~Gd~Vl~~~~~y~~~~~~~~~~~-------------- 124 (400)
T PRK06234 62 GNPTSTEVENKLALLEG-GEAAVVAASGMGAISSSLWS--ALKAGDHVVASDTLYGCTFALLNHGL-------------- 124 (400)
T ss_pred CCccHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHH--HhCCCCEEEEecCccchHHHHHHHHH--------------
Confidence 35556788888888885 35688899999999888763 24566778887776654332211100
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHh--CCEEEEecccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRL 231 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~--~~~li~De~~~g~~~ 231 (411)
...+.++..++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|+++ ++++|+||+|+....
T Consensus 125 --~~~G~~v~~vd~~d~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~~~ 195 (400)
T PRK06234 125 --TRYGVEVTFVDTSNLEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTPYI 195 (400)
T ss_pred --hhCCeEEEEECCCCHHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCchhc
Confidence 01122344555568999998886 35778888888888898888 99999999997 999999999973211
Q ss_pred ccCccccccCCCcchhhhhhhccC-Cccc-ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 232 AYGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 232 g~~~~~~~~~~~~d~~~~sK~~~~-G~~~-g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
+... .++.+.-+.|+||.+++ |.++ ||+++++++++.++..... .......++..++.+...++.+ +...++
T Consensus 196 ~~~l---~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~-~~~g~~l~p~~a~l~~~~l~tl--~~r~~~ 269 (400)
T PRK06234 196 QRPL---QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIK-DMTGSVIGPFEAFLIIRGMKTL--QIRMEK 269 (400)
T ss_pred CCch---hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHH-HhcCCCCCHHHHHHHHhccCcH--HHHHHH
Confidence 1111 11223334589999986 7664 8888998888877531111 1113456777777776665433 345566
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 375 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 375 (411)
..++..++.+.|++... .+|. .. ...+.|.++.|++.. ....+.++.+.|.--+
T Consensus 270 ~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~------------~~~~~~~f~~~l~~~~ 337 (400)
T PRK06234 270 HCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG------------GVEEGKVVMNNVKLAT 337 (400)
T ss_pred HHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC------------cHHHHHHHHHhCCcce
Confidence 66777777777765310 0110 00 123457788888842 1233466777776656
Q ss_pred eEeccCC
Q 015230 376 VYFAPSQ 382 (411)
Q Consensus 376 i~v~~~~ 382 (411)
+-++.|+
T Consensus 338 ~~~s~G~ 344 (400)
T PRK06234 338 LAVSLGD 344 (400)
T ss_pred EeccCCC
Confidence 5555553
No 272
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.76 E-value=3.6e-17 Score=153.55 Aligned_cols=238 Identities=15% Similarity=0.114 Sum_probs=151.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+......++.+.+++..+ .+.+++++||++|+..+++.. ..++++|++..+.|.+. .......
T Consensus 51 ~~~p~~~~le~~la~l~g-~~~~~~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~~~~t-~~~~~~~------------- 113 (380)
T TIGR01325 51 YANPTVAAFEERIAALEG-AERAVATATGMSAIQAALMTL--LQAGDHVVASRSLFGST-VGFISEI------------- 113 (380)
T ss_pred CCCchHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHH--hCCCCEEEEecCCcchH-HHHHHHH-------------
Confidence 345567888888888774 467888999999999999743 34567777765554432 2211100
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
....+..+..++.+|++++++.++ +++++|+++.++|+.|...+ +++|.++|+++|+++|+|++|+.....
T Consensus 114 --~~~~g~~v~~v~~~d~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~~~ 184 (380)
T TIGR01325 114 --LPRFGIEVSFVDPTDLNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPVLQ 184 (380)
T ss_pred --HHHhCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 000112344555568888888775 35788888888888888888 999999999999999999999732011
Q ss_pred cCccccccCCCcchh--hhhhhccC-Cccc-ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 233 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~--~~sK~~~~-G~~~-g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
......+|++ |++|.++| |.++ |++++++++++.+.... .......++..++.+...++.+. ...+
T Consensus 185 -----~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~---~~~g~~~~p~~a~~~l~~l~tl~--~r~~ 254 (380)
T TIGR01325 185 -----QPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYL---RHTGPAMSPFNAWVLLKGLETLS--LRMQ 254 (380)
T ss_pred -----CchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHH---HhhCCCCCHHHHHHHHhccCcHH--HHHH
Confidence 1112234554 79999996 6665 66778888777765311 11122345565555555554443 3456
Q ss_pred HHHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 309 YLNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
+..++..++.+.|++... .+|. .. ...+.|.++.|++.
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 677777777777776420 0121 11 12356889999984
No 273
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.76 E-value=9.1e-17 Score=150.15 Aligned_cols=233 Identities=18% Similarity=0.121 Sum_probs=149.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+.+.....+.+.+++..+. +..++++||++|+..++. ...++++|++.++.|++.........
T Consensus 49 ~~~pt~~~le~~la~l~g~-~~~~~~~sG~~ai~~~~~---ll~~Gd~Vl~~~~~y~~t~~~~~~~~------------- 111 (366)
T PRK08247 49 TGNPTRGVLEQAIADLEGG-DQGFACSSGMAAIQLVMS---LFRSGDELIVSSDLYGGTYRLFEEHW------------- 111 (366)
T ss_pred CCCchHHHHHHHHHHHhCC-CcEEEEcCHHHHHHHHHH---HhCCCCEEEEecCCcCcHHHHHHHHh-------------
Confidence 3455678888888888854 445888899999987664 34567889999999987433221110
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 231 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~ 231 (411)
...+..+..++..|+++++++++. ++++|+++.++|+.+...+ +++|.++|++||+++|+||+|. ++.
T Consensus 112 ---~~~G~~v~~vd~~d~~~l~~~i~~---~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~~- 180 (366)
T PRK08247 112 ---KKWNVRFVYVNTASLKAIEQAITP---NTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPVL- 180 (366)
T ss_pred ---hccCceEEEECCCCHHHHHHhccc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 011223445555589999988863 5678777666666666555 9999999999999999999995 221
Q ss_pred ccCccccccCCCcchhhhhhhccC--Cccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 232 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 232 g~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
.... ..+.+.-+.|+||.++| +++.|+++++ +++.+.+... ........+++.+..+...++.+ +...+
T Consensus 181 ~~p~---~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~---~~~~g~~~s~~~a~l~~~~l~tl--~~r~~ 252 (366)
T PRK08247 181 QRPL---EEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY---QNAAGAVLSPFDSWLLIRGMKTL--ALRMR 252 (366)
T ss_pred cCch---hcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH---HHhcCCCCChHHHHHHHhccCcH--HHHHH
Confidence 1111 12333345689999985 3678988876 6666665421 11223445667666666655433 23344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceE--EeeecceEEEEE
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFF 345 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~g~~~~~~~ 345 (411)
+.+++...+.+.|++. +.+.. .++.|.++.|++
T Consensus 253 ~~~~~a~~l~~~L~~~----p~v~~v~~P~~gg~~sf~~ 287 (366)
T PRK08247 253 QHEENAKAIAAFLNEQ----PGVTDVLYPGRGGMLSFRL 287 (366)
T ss_pred HHHHHHHHHHHHHHhC----CCeeEEecCCcCcEEEEEE
Confidence 5677777777777654 43322 233577778877
No 274
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.76 E-value=1e-16 Score=150.84 Aligned_cols=238 Identities=16% Similarity=0.117 Sum_probs=149.5
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++.++ .+++++++||++|+..++... ..+++.||+..+.|.+.........
T Consensus 60 ~p~~~~le~~la~l~g-~~~~v~~ssG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~--------------- 121 (390)
T PRK08133 60 NPTVTMFQERLAALEG-AEACVATASGMAAILAVVMAL--LQAGDHVVSSRSLFGSTVSLFEKIF--------------- 121 (390)
T ss_pred ChHHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCcchhHHHHHHHHH---------------
Confidence 5556788888888874 567889999999999988743 3456788887777665332211110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
...+..+..++.+|++++++.++ +++++|+++.++|+.|.+.+ +++|.++|++||+++|+|++++.......
T Consensus 122 -~~~G~~v~~vd~~d~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~~~~~p 193 (390)
T PRK08133 122 -ARFGIETTFVDLTDLDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTPALQQP 193 (390)
T ss_pred -HHcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 00122445555568899988886 36788888888888898888 99999999999999999999962211111
Q ss_pred ccccccCCCcchhhhhhhccC-Cccc-ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~-G~~~-g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
. .++.+.-+.|+||.+++ |.++ |+++++++.++.+.. .........++..+..++..++.+ ....++..+
T Consensus 194 --l-~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~---~~~~~g~~~~~~~a~~~l~gl~tl--~~R~~~~~~ 265 (390)
T PRK08133 194 --L-KLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG---FLRTAGPTLSPFNAWVFLKGLETL--SLRMEAHSA 265 (390)
T ss_pred --h-hhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH---HHHHhCCCCCHHHHHHHHcccchH--HHHHHHHHH
Confidence 1 12322224589999986 7777 556777777665542 111223345566655555444432 333345556
Q ss_pred HHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 313 ITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 313 ~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
+...+.+.|++... .+|. .. ...+.|.++.|++.
T Consensus 266 ~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 266 NALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred HHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 66666666665410 0111 00 12356889999984
No 275
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.76 E-value=9e-17 Score=151.44 Aligned_cols=240 Identities=14% Similarity=0.076 Sum_probs=152.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+......++.+.+++..+ .+..+.+++|+.|+..++.. ...++++|++..+.|.+..........
T Consensus 62 ~~~p~~~~Le~~lA~l~G-~~~~~~~~sG~~Ai~~~l~~--~l~~Gd~Vl~~~~~y~~~~~~~~~~~~------------ 126 (398)
T PRK07504 62 YSNPTVDMFEKRMCALEG-AEDARATASGMAAVTAAILC--QVKAGDHVVAARALFGSCRYVVETLLP------------ 126 (398)
T ss_pred CCCchHHHHHHHHHHHhC-CCeeeEecCHHHHHHHHHHH--HhCCCCEEEEcCCchhHHHHHHHHHHh------------
Confidence 345567888888888885 44455678999999877753 345668888888877764322211100
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
..+.++..++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 127 ----~~G~~v~~vd~~d~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~~~ 195 (398)
T PRK07504 127 ----RYGIESTLVDGLDLDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPLFQ 195 (398)
T ss_pred ----hcCeEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 0112233334448899988886 36788888888888898888 999999999999999999999722011
Q ss_pred cCccccccCCCcchhhhhhhccC-Ccccc-cccccHHHHHH-hcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG-GLPVG-AYGGRRDIMEM-VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~-G~~~g-~~~~~~~~~~~-~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
.. . .++.+.-+.|++|++++ |+++| +++++++.++. +.. .........+++.++.++..++.+ +...++
T Consensus 196 ~~--~-~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~---~~~~~g~~~s~~~A~~~l~~L~tl--~~R~~~ 267 (398)
T PRK07504 196 KP--L-ELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD---YFRHTGPSLSPFNAWTLLKGLETL--PVRVRQ 267 (398)
T ss_pred Cc--h-hhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccchH--HHHHHH
Confidence 11 1 12333334578999985 88886 55667665542 321 111123456777777777777655 334555
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
..++...+.+.|++... .||. .. ..++.|.++.|++.
T Consensus 268 ~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 268 QTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 66777777777765410 1111 11 12345889999984
No 276
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=1.7e-16 Score=149.26 Aligned_cols=240 Identities=15% Similarity=0.130 Sum_probs=156.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+.....+++.+.+++..+ .+.+++++||++|+..++... ..+++.|++..+.|++.........
T Consensus 61 ~~~p~~~~le~~lA~l~g-~~~~i~~ssG~~Ai~~~l~al--l~~GD~Vi~~~~~y~~~~~~~~~~~------------- 124 (398)
T PRK08249 61 NTNPTVQAFEEKVRILEG-AEAATAFSTGMAAISNTLYTF--LKPGDRVVSIKDTYGGTNKIFTEFL------------- 124 (398)
T ss_pred CCChHHHHHHHHHHHHhC-CCeEEEeCChHHHHHHHHHHh--cCCCCEEEEcCCchHHHHHHHHHHH-------------
Confidence 346667888888888875 456788888999999888642 4467889999988876322111100
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
...+.++..++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+.+...
T Consensus 125 ---~~~Gi~v~~vd~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~~~ 194 (398)
T PRK08249 125 ---PRMGVDVTLCETGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPINQ 194 (398)
T ss_pred ---hhCCeEEEEcCCCCHHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccccC
Confidence 00112233344458999998886 35788888877788899988 999999999999999999999733111
Q ss_pred cCccccccCCCcchhhhhhhccC-Cccc-ccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~-G~~~-g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
.. . .++.+.-+.|++|.++| |.++ |++++++++++.+.... .......++..++.+...++.+. ...++.
T Consensus 195 ~~--l-~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~---~~~g~~~s~~~a~l~l~~l~tL~--~R~~~~ 266 (398)
T PRK08249 195 NP--L-ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR---EINGATMDPMSAYLILRGMKTLK--LRVRQQ 266 (398)
T ss_pred Cc--h-hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH---HhcCCCCCHHHHHHHHhCcchHH--HHHHHH
Confidence 11 1 12333335589999986 5565 66678888887775322 22245667777777777666553 344666
Q ss_pred HHHHHHHHHHHHHHHH----hcCCc-e---------EEeeecceEEEEEe
Q 015230 311 NKITGELTQGIIDAGK----KAGHA-I---------CGGYISGMFGFFFT 346 (411)
Q Consensus 311 ~~~~~~~~~~l~~~~~----~~~~~-~---------~~~~~g~~~~~~~~ 346 (411)
.++...+.+.|++... .||.. . ...+.|.++.|++.
T Consensus 267 ~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 267 QESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 7777777777775310 11111 0 12356889999884
No 277
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.76 E-value=1.3e-16 Score=144.12 Aligned_cols=198 Identities=21% Similarity=0.254 Sum_probs=142.9
Q ss_pred CEEEeccCCccccccCCCcHHHHHHHHHHHHcCCC------CCCC-CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 36 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS------FGAP-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 36 ~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~------~~~~-~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
..|+|..+. .+ .+|.|.+++.+.+..... |++- ....++.++.+++..+ ++.+|+||+++||++.+
T Consensus 44 ~vyld~~at---~p---~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 44 PVYLDNQAT---GP---MDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred cEEEecCcC---CC---CCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHH
Confidence 456776555 33 789999999998888422 1111 2225677777888887 66679999999999999
Q ss_pred HHHHHHh-ccC-Cc-EEEEEeCCcCCCchhhhhhc--CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 108 VLRLARA-FTG-RE-RIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 108 al~~~~~-~~~-~~-~vi~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
+++.... +.. .. .||.+...|.....+...+. |..+.+++++ ..+.. |.+.+++.++ .
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~~-------------d~~~~~~~i~---~ 180 (428)
T KOG1549|consen 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGLV-------------DISKLREAIR---S 180 (428)
T ss_pred HHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-ccccc-------------cHHHHHHhcC---C
Confidence 9975422 221 22 66777666666666555443 3334444444 33333 8899999888 5
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhh--hhccC-Cccc
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGG-GLPV 259 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s--K~~~~-G~~~ 259 (411)
++++|.+..++++.|+..| +++|.++|+++++.+++|.+|+ .|. ...|.-.+.+|+.++| |++++ | +
T Consensus 181 ~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa---vG~-i~vDV~eln~D~~s~s~HK~ygp~~--i 250 (428)
T KOG1549|consen 181 KTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA---VGK-IPVDVQELNADFLSISAHKIYGPPG--I 250 (428)
T ss_pred CceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh---cCC-ccccHHHcCchheeeecccccCCCc--c
Confidence 8999999999999999999 9999999999999999999997 443 2345555677877554 99985 4 9
Q ss_pred ccccccH
Q 015230 260 GAYGGRR 266 (411)
Q Consensus 260 g~~~~~~ 266 (411)
|++++++
T Consensus 251 GaLYvr~ 257 (428)
T KOG1549|consen 251 GALYVRR 257 (428)
T ss_pred eEEEEcc
Confidence 9998875
No 278
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.75 E-value=1.4e-16 Score=149.15 Aligned_cols=239 Identities=14% Similarity=0.109 Sum_probs=156.5
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+.+....++.+.+++..+ .+++++++||++|+..++... ..+++.|++..+.|.+.........+...
T Consensus 48 ~~~p~~~~le~~lA~l~g-~~~v~~~~gg~~Ai~~~l~al--l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~--------- 115 (382)
T TIGR02080 48 SGNPTRDLLQQALAELEG-GAGAVVTNTGMSAIHLVTTAL--LGPDDLLVAPHDCYGGTYRLLNALAKKGC--------- 115 (382)
T ss_pred CCCchHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhhcC---------
Confidence 456667888888888885 578999999999999988753 45678888888988764433222222110
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~ 231 (411)
..+..++..|+++++++++ +++++|+++..+|++|...+ +++|.++|+++|+++|+|++|+.+ ..
T Consensus 116 -------~~v~~~d~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~ 181 (382)
T TIGR02080 116 -------FRVLFVDQGDEQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPALQ 181 (382)
T ss_pred -------eEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 0122222237888888886 35778888877788888888 999999999999999999999732 11
Q ss_pred ccCccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 232 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 232 g~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
.. . ..+.+.-+.|++|.++| +++.|+++. ++++++.+.... .......+++.+..++..++.+. ...+
T Consensus 182 ~p---l-~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~---~~~g~~~sp~~a~l~lr~l~tl~--~R~~ 252 (382)
T TIGR02080 182 NP---L-ALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA---NNLGVTGGAFDSYLTLRGLRTLV--ARMR 252 (382)
T ss_pred Cc---h-hhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH---HccCCCCCHHHHHHHHcccchHH--HHHH
Confidence 11 1 12332334589999975 578998855 677776665211 22244567888777766665443 2255
Q ss_pred HHHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 309 YLNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
+..++...+.+.|++... .||. .. ...+.|.++.|++.
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 253 LQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 666777777777765310 1111 00 12356889999984
No 279
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.75 E-value=1.5e-16 Score=149.56 Aligned_cols=241 Identities=13% Similarity=0.050 Sum_probs=153.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
......++.+.+++..+ .+..++++||+.|+..++... ..+++.|++..+.|.+..........
T Consensus 57 ~~p~~~~le~~lA~l~g-~~~av~~~sG~~Ai~~~l~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~~------------- 120 (391)
T TIGR01328 57 GNPTVSNLEGRIAFLEG-TEAAVATSSGMGAIAATLLTI--LKAGDHLISDECLYGCTFALLEHALT------------- 120 (391)
T ss_pred CCchHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHH--hCCCCEEEEecCcchHHHHHHHHHHh-------------
Confidence 45556788888888885 455788899999999888643 34667788877766543322211110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
..+..+..++.+|++++++.++ +++++|++|.++|+.|.+.+ +++|.++|+++|+++|+|++|+....+.
T Consensus 121 ---~~G~~~~~vd~~d~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~~~~~ 190 (391)
T TIGR01328 121 ---KFGIQVDFINMAIPEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATPMLTN 190 (391)
T ss_pred ---cCCeEEEEECCCCHHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchhccCC
Confidence 1123344555568888888876 35778888888888888888 9999999999999999999996211111
Q ss_pred CccccccCCCcchhhhhhhccC-Ccc-cccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~-~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
.. ..+.+.-+.|++|.+++ |.+ .|++++++++++.++........ ....++..++.+...++.+ +...++.+
T Consensus 191 ~~---~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~-g~~l~~~~a~l~l~~L~tl--~~r~~~~~ 264 (391)
T TIGR01328 191 PV---ALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT-GSVISPFDAWLILRGLKTL--NIRMKRHS 264 (391)
T ss_pred ch---hcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC-CCCCCcHHHHHHHhCcCcH--HHHHHHHH
Confidence 11 11222234588999985 766 46678888888777631111111 2344666666666555433 33456677
Q ss_pred HHHHHHHHHHHHHHH----hcCC-c---------eEEeeecceEEEEEe
Q 015230 312 KITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 346 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~----~~~~-~---------~~~~~~g~~~~~~~~ 346 (411)
++..++.+.|++... .+|. . ...++.|.++.|++.
T Consensus 265 ~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 265 ENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 778888888776420 1111 0 012345788999884
No 280
>PRK02769 histidine decarboxylase; Provisional
Probab=99.75 E-value=1.5e-15 Score=141.49 Aligned_cols=289 Identities=15% Similarity=0.079 Sum_probs=182.2
Q ss_pred CHHHHHHHHHHHhhCC-CCCE--EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC
Q 015230 75 CLLENVLAEMVISAVP-SIEM--VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 151 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~-~~~~--v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (411)
.+.++++.+++++.++ ..++ .+||+||||++..++..++...+++.|++.+..++ ....++...|.+...++...
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~-Sv~ka~~~lg~~~~~V~~~~- 141 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHY-SVSKIARLLRIKSRVITSLP- 141 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCcee-hHHHHHHHcCCCCceeccCC-
Confidence 4567789999999997 3344 48999999999999887766545555555544444 45555555555444433321
Q ss_pred CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhC---CEEEEeccccc
Q 015230 152 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG---ALLIFDEVMTG 228 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~---~~li~De~~~g 228 (411)
.+.. |+++|++.+++...++.+|++...+++.|.+.| +++|.++|++|| +++++|.+|++
T Consensus 142 ~g~i-------------d~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 142 NGEI-------------DYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred CCcC-------------cHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 1111 899999999865446888999999999999999 999999999998 69999999986
Q ss_pred c-ccc--cCccccccCCCcchhhh--hhhccCCcccccccccHHHHHHhcCCCCcccc--cCC--CCCHHHHHHHHHHHH
Q 015230 229 F-RLA--YGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQA--GTL--SGNPLAMTAGIHTLK 299 (411)
Q Consensus 229 ~-~~g--~~~~~~~~~~~~d~~~~--sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~--~t~--~~~~~~~a~~~~~l~ 299 (411)
+ ..- ....++... ..|.+++ -|.+++..++|.++.+++..+.+.....+... .++ +.+..+.++..++++
T Consensus 205 ~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~ 283 (380)
T PRK02769 205 MILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIR 283 (380)
T ss_pred eeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHH
Confidence 5 211 100111111 4565544 48777556689888888776665421111110 111 223344555556666
Q ss_pred HHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCe
Q 015230 300 RLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 376 (411)
Q Consensus 300 ~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 376 (411)
.+.. ++..++..++.+++.++|++. ++..-..+....+.|.. +. ..+. +|-
T Consensus 284 ~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~~~~v~f~~-------------~~----~~~~-----~~w 337 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPNSITVVFPC-------------PS----ERIW-----KKW 337 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCCceEEEEcC-------------CC----HHHH-----hCe
Confidence 5544 666778888888888888764 33222223344444422 11 1121 455
Q ss_pred EeccCCC-cceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 377 YFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 377 ~v~~~~~-~~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.+.+... -++++...+|++.+|.+++-|.+.+.
T Consensus 338 ~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 338 HLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 5555432 23455678899999999999987654
No 281
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.75 E-value=1.7e-16 Score=148.09 Aligned_cols=289 Identities=10% Similarity=0.038 Sum_probs=178.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
+.....+.+.+++.. +.+++++++||++|+..++... ..+++.|++.++.|++...........
T Consensus 49 nPt~~~lE~~lA~l~-g~~~~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~~~~~~------------- 112 (377)
T TIGR01324 49 TLTHFALQDAMCELE-GGAGCYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCDIVLKR------------- 112 (377)
T ss_pred CccHHHHHHHHHHHh-CCCcEEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHHHHHHh-------------
Confidence 334567777777766 4568899999999999998743 456788888888887643211100000
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
.+.++..++..+.+.+++.++ +++++|++|.+.|+.|...+ +++|.++|++||+++|+|++|+ .|..
T Consensus 113 ---~gi~v~~~d~~~~e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a---~g~~ 179 (377)
T TIGR01324 113 ---MGVDITYYDPLIGEDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA---AGLL 179 (377)
T ss_pred ---cCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc---cccc
Confidence 011223333334477777775 46889999988888888887 9999999999999999999997 2211
Q ss_pred ccccccCCCcchhhhhhhccC--CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
+....+|.+.-+.|++|+++| +.-.|+++++++.++.+... ........+|..+......++.+ ....++..+
T Consensus 180 ~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~---~~~~G~~l~p~~a~~~~rgl~tl--~~R~~~~~~ 254 (377)
T TIGR01324 180 FKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH---SYLMGQMVDADDAYTTLRGLRTL--GVRLKQHQE 254 (377)
T ss_pred cCccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH---HHHhCCCCCHHHHHHHHhhhhhH--HHHHHHHHH
Confidence 111123333334478999985 35678888888777766521 11223445666666666665543 233566666
Q ss_pred HHHHHHHHHHHHHH----hcCC-c---------eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEe
Q 015230 313 ITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 378 (411)
Q Consensus 313 ~~~~~~~~l~~~~~----~~~~-~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 378 (411)
++..+.+.|++... .+|. . ....+.|.++.|++.+. ....+.++.+.|+-.++-+
T Consensus 255 ~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~-----------~~~~~~~~~~~l~~~~~~~ 323 (377)
T TIGR01324 255 SSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL-----------TQKQVHAFLDHLQLFGLGY 323 (377)
T ss_pred HHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC-----------CHHHHHHHHHhCCcceEec
Confidence 66667777766410 0111 0 01235688889988421 2344567777777666665
Q ss_pred ccCCCcc-----------------------eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 379 APSQFEA-----------------------GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 379 ~~~~~~~-----------------------~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+-|+... +|++. --|+.+.+++-|.++++.
T Consensus 324 slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~sv--GlE~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 324 SWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHI--GLENVDDLKADLKAGFEA 376 (377)
T ss_pred cCCCccceeecCCCCCCHHHHHhccCCCCEEEEEe--CCCCHHHHHHHHHHHHhc
Confidence 5554322 23332 234677777777777764
No 282
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=3e-16 Score=147.00 Aligned_cols=240 Identities=15% Similarity=0.114 Sum_probs=155.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+++...+.+.+++++..+ .+.+++++||++|+..++.. ...+++.|++.++.|++.+............
T Consensus 49 ~~~pt~~~L~~~lA~l~g-~~~~i~~~sg~~Ai~~~l~~--l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi-------- 117 (386)
T PRK08045 49 RGNPTRDVVQRALAELEG-GAGAVLTNTGMSAIHLVTTV--FLKPGDLLVAPHDCYGGSYRLFDSLAKRGCY-------- 117 (386)
T ss_pred CCCccHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHH--HcCCCCEEEEcCCCcHHHHHHHHHHHhhCCe--------
Confidence 445667889999998886 45799999999999998874 2456788999889888644333222211100
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
.+..++..|++++++.++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 118 --------~v~~vd~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~~~ 182 (386)
T PRK08045 118 --------RVLFVDQGDEQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPALQ 182 (386)
T ss_pred --------EEEEeCCCCHHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 111122237888888876 35678888888888888888 999999999999999999999733011
Q ss_pred cCccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
.. . .++.+.-+.|++|+++| +...|+++. ++++++.+... ........+++.+..+...++-+ +..+++
T Consensus 183 ~p--l-~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~---~~~~g~~~~p~~~~l~~rgl~tl--~~R~~~ 254 (386)
T PRK08045 183 NP--L-ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW---ANNIGVTGGAFDSYLLLRGLRTL--VPRMEL 254 (386)
T ss_pred Cc--h-hhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH---HHhcCCCCCHHHHHHHHhhhccH--HHHHHH
Confidence 11 1 12333334589999985 467888865 57676666421 12224456778777777776543 334566
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
..++...+.+.|++... .||. .. ...+.|.++.|++.
T Consensus 255 ~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 255 AQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred HHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 67777777777765410 0111 00 12356889999884
No 283
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=2.1e-16 Score=147.86 Aligned_cols=235 Identities=13% Similarity=0.116 Sum_probs=144.7
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhh---hhhcCCCCcccCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDS 151 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~ 151 (411)
+....++.+.+++..+....+ .+++|++|+..++... ..+++.|++..+.|...+... ....|.
T Consensus 44 ~p~~~~L~~~lA~l~g~~~~v-~~~sG~~ai~~~l~al--~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~---------- 110 (376)
T PRK06460 44 NPTVLELTKKIVELENAEMGV-AFSSGMGAISTTALAL--LKPGNSVLVHRDMFGRSYRFFTDYLKNWGV---------- 110 (376)
T ss_pred CccHHHHHHHHHHHhCCCcEE-EeCCHHHHHHHHHHHH--hCCCCEEEEecCCcCcHHHHHHHHHHhhCc----------
Confidence 555677888888887644444 4467889998888642 345677888766554433221 111222
Q ss_pred CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccc
Q 015230 152 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 231 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~ 231 (411)
.+..++.++.+.+++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+||+|+....
T Consensus 111 ---------~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~~~ 174 (376)
T PRK06460 111 ---------NVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTPIN 174 (376)
T ss_pred ---------EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcccc
Confidence 233344445444544432 46788888888888899988 89999999999999999999973200
Q ss_pred ccCccccccCCCcchhhhhhhccC--CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 232 AYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 232 g~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
.. .. .++.+.-+.|+||+++| +.++|++++++++++.+......+ ..+.++..+..++..++.+ +..+++
T Consensus 175 ~~--~l-~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~---g~~~~~~~a~~~l~~~~~l--~~r~~~ 246 (376)
T PRK06460 175 QK--PL-ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTL---GTSLDPHAAYLTLRGIKTL--KIRMDV 246 (376)
T ss_pred CC--hh-hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhc---CCCCCHHHHHHHHhchhhH--HHHHHH
Confidence 11 01 12222224589999974 367999999999888776322111 2234455444444444433 345677
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
+.++..++.+.|++... .+|. .. ...+.|.++.|++.
T Consensus 247 ~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 247 INRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 88888888888876410 0110 00 12356889999985
No 284
>PRK07049 methionine gamma-lyase; Validated
Probab=99.75 E-value=3.7e-16 Score=148.21 Aligned_cols=219 Identities=18% Similarity=0.169 Sum_probs=143.6
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhh-hcCCCCcccCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV-KAGSGVATLGLPDS 151 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~ 151 (411)
+++.....+.+.+++.. +.+++++++||++|+..++.. ...+++.|++..+.|.+....... +...++
T Consensus 80 ~~~Pt~~~Le~~lA~le-g~~~~iv~~sG~~Ai~~~l~a--l~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi-------- 148 (427)
T PRK07049 80 FNHPNSEIVEDRLAVYE-GAESAALFSSGMSAIATTLLA--FVRPGDVILHSQPLYGGTETLLAKTFRNFGV-------- 148 (427)
T ss_pred CCCcCHHHHHHHHHHHh-CCCcEEEEccHHHHHHHHHHH--HhCCCCEEEEcCCCcccHHHHHHHHHHhcCc--------
Confidence 34555678888888888 456788899999999888864 334668889988888875433211 111111
Q ss_pred CCCCCCCCCceeec-CCCCHHHHHHHHHcC--CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHH------hCCEEEE
Q 015230 152 PGVPKGATYETLTA-PFNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLIF 222 (411)
Q Consensus 152 ~~~~~~~~~~~~~~-~~~d~~~l~~~~~~~--~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~------~~~~li~ 222 (411)
+++.+ ...|.+++++.+++. .+++++++++..+|++|.+.+ +++|.+++++ +++++|+
T Consensus 149 ---------~~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vvv 215 (427)
T PRK07049 149 ---------GAVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIAC 215 (427)
T ss_pred ---------EEEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEEE
Confidence 11111 122677887777531 236788888888888888887 6667666666 7999999
Q ss_pred ecccccc-ccccCccccccCCCcchhhhhhhccC--CcccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHH
Q 015230 223 DEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 299 (411)
Q Consensus 223 De~~~g~-~~g~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~ 299 (411)
||+|.+. .... . ..+.+.-+.|+||.++| |+|+||+++++++++.+.... .....+.+++.+..+...++
T Consensus 216 Dety~~~~~~~p---l-~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~---~~~g~~ls~~~a~l~~r~L~ 288 (427)
T PRK07049 216 DNTLLGPVFQKP---L-EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALR---SAIGTQLDPHSCWMLGRSLE 288 (427)
T ss_pred ECCccccccCCc---c-ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHH---HhcCCCCCHHHHHHHHcCCC
Confidence 9998644 2111 1 12222234499999994 799999999988888776321 11234567788887777665
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 300 RLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
.+ ...+++..++...+.+.|++.
T Consensus 289 tl--~~R~~~~~~~a~~la~~L~~~ 311 (427)
T PRK07049 289 TL--VLRMERANRNARAVAEFLRDH 311 (427)
T ss_pred hH--HHHHHHHHHHHHHHHHHHHhC
Confidence 43 233455577777777777765
No 285
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=2.4e-15 Score=143.87 Aligned_cols=324 Identities=15% Similarity=0.109 Sum_probs=187.3
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHc-C-CCC------CCC---CHHHHHHHHHHHhhCCCC-CEEEE---eCCh
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKK-G-TSF------GAP---CLLENVLAEMVISAVPSI-EMVRF---VNSG 101 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~-~-~~~------~~~---~~~~~~l~~~l~~~~~~~-~~v~~---~~~g 101 (411)
.-+.++.+ =++..|.+++++...+.+ . .++ ++. .++++...++..+.++.. +.+.+ .+||
T Consensus 35 ~~l~lias-----en~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG 109 (475)
T PLN03226 35 KGLELIAS-----ENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSG 109 (475)
T ss_pred cCeeEecC-----CccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCch
Confidence 34555554 223688999999999944 1 221 111 222222333455666533 33333 4789
Q ss_pred HHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC------CHHHHHH
Q 015230 102 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALEN 175 (411)
Q Consensus 102 ~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~l~~ 175 (411)
+.|+.+++... ..+++.|++.+.+..|+..-.....|...-. .+ .......+.++ |++++++
T Consensus 110 ~~AN~av~~aL--~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~------~~----~~~~~~~y~~~~~~g~iD~d~Le~ 177 (475)
T PLN03226 110 SPANFAVYTAL--LQPHDRIMGLDLPHGGHLSHGYQTDGKKISA------TS----IYFESMPYRLDESTGLIDYDKLEK 177 (475)
T ss_pred HHHHHHHHHHh--CCCCCEEEECCCCcCcchhhhhhhccccccc------ce----EEEEeeeeeecCCCCCcCHHHHHH
Confidence 99999988742 3456777775543333222111111110000 00 00011122333 8999999
Q ss_pred HHHcCCCcEEEEEE-cccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-cccc-CccccccCCCcch--hhh
Q 015230 176 LFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAY-GGAQEYFGVTPDL--TTL 249 (411)
Q Consensus 176 ~~~~~~~~~~~vi~-~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~-~~~~~~~~~~~d~--~~~ 249 (411)
.+.+. ++++|++ +++ .|...+ +++|.++|++||+++++|++|+ |+ ..+. ...++ ..|+ .|+
T Consensus 178 ~l~~~--~pklIv~~~S~---~s~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~----~~Div~~t~ 244 (475)
T PLN03226 178 KAMLF--RPKLIIAGASA---YPRDWD----YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE----YCDVVTTTT 244 (475)
T ss_pred HHhhc--CCeEEEEecCc---CCCccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC----CCeEEEecC
Confidence 98754 3455555 433 445556 8999999999999999999996 55 2221 11111 2454 578
Q ss_pred hhhccCCcccccccccHHHH-----------H---HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHH
Q 015230 250 GKIIGGGLPVGAYGGRRDIM-----------E---MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNK 312 (411)
Q Consensus 250 sK~~~~G~~~g~~~~~~~~~-----------~---~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~ 312 (411)
+|+|.|. +-|+++++++.+ + .+... .+...+.++++...++..++++.+.. ++.++++.+
T Consensus 245 hK~L~GP-~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a--~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~ 321 (475)
T PLN03226 245 HKSLRGP-RGGMIFFRKGPKPPKGQGEGAVYDYEDKINFA--VFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKA 321 (475)
T ss_pred cccccCC-CceEEEEchhhcccccCCCccHHHHHHHhccc--cCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 8999641 235556666433 2 22211 11112334556666777777887765 346788889
Q ss_pred HHHHHHHHHHHHHHhcCCceEEee-ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC---------
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------- 382 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------- 382 (411)
+.+++++.|++. ++.....+ ...++.+++.... .+..++.+.|.+.||.+..+.
T Consensus 322 na~~L~~~L~~~----G~~l~~~~t~~hi~lv~~~~~g------------i~~~~~~~~L~~~~I~~nk~~~p~~~~~~~ 385 (475)
T PLN03226 322 NAAALANRLMSK----GYKLVTGGTDNHLVLWDLRPLG------------LTGSRVEKVLDLAHITLNKNAVPGDSSALV 385 (475)
T ss_pred HHHHHHHHHHhC----CCEEEcCCCCCCEEEEEccCCC------------CCHHHHHHHHHHCCCEECCCCCCCCcccCC
Confidence 999998888774 33222111 2456667663321 223578888999999997642
Q ss_pred Ccceee------ecCCCHHHHHHHHHHHHHHHH
Q 015230 383 FEAGFT------SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 383 ~~~~~~------~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.+.+|+ ...++++|++++.+.|.++++
T Consensus 386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 234665 367789999999999998876
No 286
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=5e-16 Score=141.30 Aligned_cols=308 Identities=20% Similarity=0.175 Sum_probs=191.7
Q ss_pred cHHHHHHHHHHHHcCCCCCC--CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCC
Q 015230 54 DDQVLAALGETMKKGTSFGA--PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 131 (411)
Q Consensus 54 ~~~v~~a~~~~l~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~ 131 (411)
..+..+++.+.++++....+ ..++++.+++++ +..+++.++|||.|++.+|+++ ...+++.||+.+.+|-..
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~~v~~FE~~~ae~~-----G~k~ava~~sgT~AL~laL~al-~ig~GDeVI~ps~TfvAT 87 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGPFVRRFEQAFAEYL-----GVKYAVAVSSGTAALHLALLAL-AIGPGDEVIVPSFTFVAT 87 (374)
T ss_pred chHHHHHHHHHHHcCCeecChHHHHHHHHHHHHh-----CCCeEEEecChHHHHHHHHHhc-CCCCCCEEEecCCchHHH
Confidence 35677888899988643322 244455555555 8889999999999999999854 467788999999999865
Q ss_pred chhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHH
Q 015230 132 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 211 (411)
Q Consensus 132 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~ 211 (411)
....+..+..++...-.++...+ |++.+|++|.. ++++|+.-... |...+ +++|.+
T Consensus 88 an~i~~~Ga~PVFvDid~~T~ni--------------d~~~ie~aIt~---~tKAIipVhl~---G~~~d----m~~i~~ 143 (374)
T COG0399 88 ANAVLLVGAKPVFVDIDPDTLNI--------------DPDLIEAAITP---RTKAIIPVHLA---GQPCD----MDAIMA 143 (374)
T ss_pred HHHHHHcCCeEEEEecCCcccCC--------------CHHHHHHHccc---CCeEEEEehhc---cCCCC----HHHHHH
Confidence 55544444443333222233333 89999999983 47787776655 44556 999999
Q ss_pred HHHHhCCEEEEeccccccccccCccccccCCCcchhhhh----hhccCCcccccccc-cHHHHHHhcC----CCC-----
Q 015230 212 ITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGG-RRDIMEMVAP----AGP----- 277 (411)
Q Consensus 212 l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s----K~~~~G~~~g~~~~-~~~~~~~~~~----~~~----- 277 (411)
+|++||++||.|.+|+ .|..+.-...|-.-|+.+|| |-++.| --|.+++ ++++.+.++. +..
T Consensus 144 la~~~~l~vIEDaAqa---~Ga~y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~ 219 (374)
T COG0399 144 LAKRHGLPVIEDAAQA---HGATYKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVF 219 (374)
T ss_pred HHHHcCCeEEEEcchh---ccCeecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCccc
Confidence 9999999999999997 22221111223334555554 888865 4566655 4556665542 110
Q ss_pred ----cccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee--cc-eEEEEEecCCC
Q 015230 278 ----MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI--SG-MFGFFFTEGPV 350 (411)
Q Consensus 278 ----~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--g~-~~~~~~~~~~~ 350 (411)
...+..+..+-+.++.++.-|+.+ +++.++-+++.+++.+.|+++.. ........+. .. ++.+.+.+.
T Consensus 220 ~y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i~~~~~-- 294 (374)
T COG0399 220 KYLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTILVDEE-- 294 (374)
T ss_pred cceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEEEecCC--
Confidence 112334455667777777777665 55666677777777777776521 1111111111 11 122222111
Q ss_pred CCcchhcccchHHHHHHHHHHHHcCeE----eccCC----------C-----c--------ceeee--cCCCHHHHHHHH
Q 015230 351 YNFEDAKKSETTKFARFYRGMLEEGVY----FAPSQ----------F-----E--------AGFTS--LAHSSDDIQHTI 401 (411)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~l~~~Gi~----v~~~~----------~-----~--------~~~~~--~~~t~~~i~~~i 401 (411)
...-+.+.+.|+++||. ..|.. . + .+++| ...+++++++.+
T Consensus 295 ----------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~ 364 (374)
T COG0399 295 ----------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVI 364 (374)
T ss_pred ----------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHH
Confidence 12336889999999554 33321 0 0 14554 577999999999
Q ss_pred HHHHHHHHh
Q 015230 402 TAAEKVLRQ 410 (411)
Q Consensus 402 ~~l~~~~~~ 410 (411)
++|++++..
T Consensus 365 ~~l~~~~~~ 373 (374)
T COG0399 365 EALKEVLGS 373 (374)
T ss_pred HHHHHHhcc
Confidence 999998764
No 287
>PLN03032 serine decarboxylase; Provisional
Probab=99.74 E-value=1.9e-15 Score=139.61 Aligned_cols=306 Identities=14% Similarity=0.033 Sum_probs=189.1
Q ss_pred cHHHHHHHHHHHHcCCCC--C------CCCHHHHHHHHHHHhhCC-CCCEE--EEeCChHHHHHHHHHHHHhccCCcEEE
Q 015230 54 DDQVLAALGETMKKGTSF--G------APCLLENVLAEMVISAVP-SIEMV--RFVNSGTEACMGVLRLARAFTGRERII 122 (411)
Q Consensus 54 ~~~v~~a~~~~l~~~~~~--~------~~~~~~~~l~~~l~~~~~-~~~~v--~~~~~g~~a~~~al~~~~~~~~~~~vi 122 (411)
++.+.+++.+.+.+..+. . ...+.++++.+++++.++ +++++ +||+|||||+..++..++...+++ ++
T Consensus 36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~-~v 114 (374)
T PLN03032 36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDG-IL 114 (374)
T ss_pred ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCc-EE
Confidence 334677777777652211 1 125667899999999998 55665 999999999999998876543334 45
Q ss_pred EEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCC
Q 015230 123 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 202 (411)
Q Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~ 202 (411)
+.+..-|.....++...+.++..++... .+.. |+++|++.+++...++.+++++..+++.|.+.|
T Consensus 115 i~s~~~H~Sv~kaa~~lg~~~~~V~~d~-~g~i-------------d~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp- 179 (374)
T PLN03032 115 YASRESHYSVFKAARMYRMEAVKVPTLP-SGEI-------------DYDDLERALAKNRDKPAILNVNIGTTVKGAVDD- 179 (374)
T ss_pred EeCCCceeHHHHHHHHcCCCCeEeeeCC-CCcC-------------cHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC-
Confidence 5566666555565555565554444322 2221 899999999865446778888888889999999
Q ss_pred HHHHHHHHHHHHHhC-----CEEEEecccccc-cc--c--cCccccccCCCcchhhh--hhhccCCcccccccccHHHHH
Q 015230 203 PDFLNAIRRITKENG-----ALLIFDEVMTGF-RL--A--YGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIME 270 (411)
Q Consensus 203 ~~~l~~i~~l~~~~~-----~~li~De~~~g~-~~--g--~~~~~~~~~~~~d~~~~--sK~~~~G~~~g~~~~~~~~~~ 270 (411)
+++|.++|++|| +++++|.+|.|+ .. . ..+.+ ....|.+++ -|.++....+|.++.+++.++
T Consensus 180 ---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 180 ---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF---RKPIGSVSVSGHKFLGCPMPCGVALTRKKHVK 253 (374)
T ss_pred ---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCC---CcCCcEEEECcccccCCCcCeEEEEEEchhhH
Confidence 999999999997 489999999755 21 1 11111 113565554 476654455888888877766
Q ss_pred HhcCCCCcccc--cCCCCC--HHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEE
Q 015230 271 MVAPAGPMYQA--GTLSGN--PLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 343 (411)
Q Consensus 271 ~~~~~~~~~~~--~t~~~~--~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~ 343 (411)
.+.....++.. .|..++ ....+.....+..+.. .+..++..++.+++.++|++. +......+..+.+.|
T Consensus 254 ~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~~~V~f 329 (374)
T PLN03032 254 ALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELSSTVVF 329 (374)
T ss_pred hhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCceEEEE
Confidence 55432222211 122222 2334444455554443 566777888888888888774 333222333334333
Q ss_pred EEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-cceeeecCCCHHHHHHHHHHHHH
Q 015230 344 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
.. +.. .. ..+|-.+.+... -++.+...++++.+|++++-|++
T Consensus 330 ~~-------------~~~---~~-----~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 330 ER-------------PMD---EA-----FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred cC-------------CCc---Hh-----HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 22 111 11 124554544321 12444567788999999998875
No 288
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.74 E-value=1.3e-15 Score=146.41 Aligned_cols=328 Identities=15% Similarity=0.089 Sum_probs=184.5
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcCC--CCC-----CCCHH---HH-HHHHHHHhhCC-CCCEEEEe---CCh
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG-----APCLL---EN-VLAEMVISAVP-SIEMVRFV---NSG 101 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~--~~~-----~~~~~---~~-~l~~~l~~~~~-~~~~v~~~---~~g 101 (411)
..++++.+ -+..+|.+++++...+.+.. ++. ...+. .+ ...+.+++.++ ..+.+.++ +||
T Consensus 35 ~~l~l~~s-----en~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sg 109 (452)
T PTZ00094 35 EGLELIAS-----ENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSG 109 (452)
T ss_pred cCeeEecc-----cccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCch
Confidence 44565554 22368899999999887632 111 11122 22 24456777776 55666677 789
Q ss_pred HHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC-----CCHHHHHHH
Q 015230 102 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENL 176 (411)
Q Consensus 102 ~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~ 176 (411)
++|+..++... ..+++.|++....+.+............+.. .+ ...++..+++ -|++++++.
T Consensus 110 t~an~~v~~al--~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~------~~----~~~~~~~~~~~~~g~id~~~L~~~ 177 (452)
T PTZ00094 110 SPANFAVYTAL--LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSA------TS----IYFESLPYQVNEKGLIDYDKLEEL 177 (452)
T ss_pred HHHHHHHHHHh--cCCCCEEEecccccCCccccccccccccccc------ce----eeeeeeecccCCCCCcCHHHHHHH
Confidence 99999988754 3345667765544433322111110000000 00 0000111111 189999999
Q ss_pred HHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcchh--hhhhh
Q 015230 177 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLT--TLGKI 252 (411)
Q Consensus 177 ~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d~~--~~sK~ 252 (411)
+++. +++++++. +++.|...| +++|.++|+++|+++++|++|+ |. ..+ ....... ..|++ |..|+
T Consensus 178 l~~~--~~~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~~~--~~D~l~~S~hK~ 246 (452)
T PTZ00094 178 AKAF--RPKLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAG-VLPSPFP--YADVVTTTTHKS 246 (452)
T ss_pred HHHh--CCCEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCC-CCCCCCC--CCcEEEcCCccC
Confidence 9753 33445542 345778888 9999999999999999999996 44 221 1111111 34654 56799
Q ss_pred ccCCcccccccccHHHHHHhcCCC--CcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 253 IGGGLPVGAYGGRRDIMEMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 253 ~~~G~~~g~~~~~~~~~~~~~~~~--~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
+.|. ..|+++.++++.+.+.... ..+....-+.++...++..++++.+.. ++..+++.++.+++.+.|++.
T Consensus 247 l~GP-~Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~--- 322 (452)
T PTZ00094 247 LRGP-RSGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR--- 322 (452)
T ss_pred CCCC-CceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC---
Confidence 9752 2456666665443322100 011010114456666777777887744 457788888888888888764
Q ss_pred cCCceEEee-ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC---------CCcceeee--cC----
Q 015230 328 AGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---------QFEAGFTS--LA---- 391 (411)
Q Consensus 328 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~---------~~~~~~~~--~~---- 391 (411)
+......+ ......+.+... +.....+...|.++||.+... ..+.+|+. ..
T Consensus 323 -g~~v~~~~~~~~~~~v~~~~~------------~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g 389 (452)
T PTZ00094 323 -GYDLVTGGTDNHLVLVDLRPF------------GITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRG 389 (452)
T ss_pred -CcEEecCCCCCceEeecCCcC------------CCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCC
Confidence 22111111 112233333211 122357788888889999522 12347773 23
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 015230 392 HSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~ 409 (411)
++++|++++++.|.+++.
T Consensus 390 ~~~~di~~l~~~l~~~~~ 407 (452)
T PTZ00094 390 AKEKDFKFVADFLDRAVK 407 (452)
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 359999999999998875
No 289
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.74 E-value=9e-16 Score=144.24 Aligned_cols=310 Identities=16% Similarity=0.102 Sum_probs=184.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh
Q 015230 55 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 134 (411)
Q Consensus 55 ~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 134 (411)
++.++++.+.+..+..+ ......++.+.+++.+ +.+++++++||++|+..++... ...+++.||+..++|.+...
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le~~la~~~-g~~~~v~~~sgt~al~lal~al-~~~~Gd~Viv~~~~~~~~~~- 88 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALEQAFCQLT-GNQHAIAVSSATAGMHITLMAL-GIGPGDEVITPSLTWVSTLN- 88 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHc-CCCCCCEEEECCCcHHHHHH-
Confidence 55678888888875332 2344567777777766 4457899999999999999743 24567889998888886543
Q ss_pred hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHH
Q 015230 135 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 214 (411)
Q Consensus 135 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~ 214 (411)
.....|..+..++........ |++++++.++. ++++|+ |++ ..|...+ +++|.++|+
T Consensus 89 ~~~~~G~~~v~vd~~~~~~~~-------------d~~~l~~~i~~---~tkav~--~~~-~~G~~~d----~~~i~~~a~ 145 (379)
T PRK11658 89 MIVLLGATPVMVDVDRDTLMV-------------TPEAIEAAITP---RTKAII--PVH-YAGAPAD----LDAIRAIGE 145 (379)
T ss_pred HHHHcCCEEEEEecCCCcCCc-------------CHHHHHHhccc---CCeEEE--EeC-CCCCcCC----HHHHHHHHH
Confidence 334445544443332111111 88999988863 466665 333 3566666 999999999
Q ss_pred HhCCEEEEecccc-cc-ccccCccccccCCCcchhhhh--hhccCCcccccccc-cHHHHHHhcCCC---Cc--------
Q 015230 215 ENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG-RRDIMEMVAPAG---PM-------- 278 (411)
Q Consensus 215 ~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~-~~~~~~~~~~~~---~~-------- 278 (411)
+||+++|+|++|+ |. ..|.. ...++ .++.||+ |.+.+ .+.|+++. ++++.+.++... ..
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~~--~g~~g--~~~~Sf~~~K~l~~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGRH--IGARG--TAIFSFHAIKNITC-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred HcCCeEEEECCCccCCeECCee--cCCCC--CEEEeCCCCCcCcc-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhc
Confidence 9999999999997 44 33321 11223 2566766 66654 36777765 467766554210 00
Q ss_pred ----------ccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHh-cCCceEEeeec-ceEEEEEe
Q 015230 279 ----------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICGGYIS-GMFGFFFT 346 (411)
Q Consensus 279 ----------~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~g-~~~~~~~~ 346 (411)
..+..+..+.+.++.+...++.+ ++..++.+++.+++++.|+++... ........... .++.+.+.
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEEC
Confidence 01112334555666666655544 445667777777777777654110 00000000011 12223331
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-----------------C--------cceeee--cCCCHHHHHH
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------F--------EAGFTS--LAHSSDDIQH 399 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----------------~--------~~~~~~--~~~t~~~i~~ 399 (411)
.. ....+.+++.+.|.++||.+.... . ..+.+| ...|+++++.
T Consensus 299 ~~----------~~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~ 368 (379)
T PRK11658 299 EE----------RCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDR 368 (379)
T ss_pred Cc----------cccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHH
Confidence 11 001124688999999998765210 0 014444 4578999999
Q ss_pred HHHHHHHHHH
Q 015230 400 TITAAEKVLR 409 (411)
Q Consensus 400 ~i~~l~~~~~ 409 (411)
.++.|++++.
T Consensus 369 i~~~i~~~~~ 378 (379)
T PRK11658 369 VITALQQIAG 378 (379)
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 290
>PRK05968 hypothetical protein; Provisional
Probab=99.73 E-value=2.9e-16 Score=147.67 Aligned_cols=259 Identities=16% Similarity=0.124 Sum_probs=160.1
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.....++.+.+++..+. +..++++||+.|+..++.. ...++++|++..+.|++..........
T Consensus 62 ~p~~~~le~~lA~l~g~-~~av~~~sG~~Ai~~al~a--l~~~Gd~Vl~~~~~y~~t~~~~~~~~~-------------- 124 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGA-EDARGFASGMAAISSTVLS--FVEPGDRIVAVRHVYPDAFRLFETILK-------------- 124 (389)
T ss_pred ChhHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHHH--HhCCCCEEEEeCCCchHHHHHHHHHHH--------------
Confidence 45567888888888854 4456667899999888864 245678899988888764322211100
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
..+.++..++..|++++++.+. ++++|++|.+.+..+...+ +++|.++|++||+++|+|++|+.......
T Consensus 125 --~~G~~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~~~~~p 194 (389)
T PRK05968 125 --RMGVEVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASPVFQRP 194 (389)
T ss_pred --HcCceEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcchhccCc
Confidence 0112333344448888888763 4567777765555555555 99999999999999999999963211111
Q ss_pred ccccccCCCcchhhhhhhccC-C-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
. .++.+.-+.|++|.++| | .+.|+++.++++++.++.....+.+ ...+++.++.+...++.+ +...++..+
T Consensus 195 --~-~~g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g--~~~~~~~A~~~l~~L~tl--~~r~~~~~~ 267 (389)
T PRK05968 195 --I-TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLG--AKLSPFEAWLLLRGLRTL--PLRMKAHEA 267 (389)
T ss_pred --h-hcCCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCC--CCCChHHHHHHHcccCcH--HHHHHHHHH
Confidence 1 12333334589999985 4 5678888888888776531111112 344566666665555433 334455555
Q ss_pred HHHHHHHHHHHHHHhcCCceEE-------------eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEec
Q 015230 313 ITGELTQGIIDAGKKAGHAICG-------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA 379 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~ 379 (411)
+...+.+.|++. +.+..+ .+.|.++.|++.+ .....++.+.|...++.++
T Consensus 268 ~a~~la~~L~~~----p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-------------~~~~~~f~~~L~~~~~~~s 330 (389)
T PRK05968 268 SALEIARRLKAH----PVVERVCHPALANHPPAGLSGTSGLFSFIFRE-------------GIDVRAFADALKLFRLGVS 330 (389)
T ss_pred HHHHHHHHHHhC----CCccEEECCCCCCChHHhCCCCceEEEEEECC-------------HHHHHHHHHhCCccEEecC
Confidence 666666666654 322222 1446688888742 2345788888887777666
Q ss_pred cCCCc
Q 015230 380 PSQFE 384 (411)
Q Consensus 380 ~~~~~ 384 (411)
.|+..
T Consensus 331 ~G~~~ 335 (389)
T PRK05968 331 WGGHE 335 (389)
T ss_pred CCCCC
Confidence 65433
No 291
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=4e-16 Score=145.54 Aligned_cols=233 Identities=13% Similarity=0.116 Sum_probs=149.6
Q ss_pred HHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCC
Q 015230 78 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 157 (411)
Q Consensus 78 ~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (411)
...|.+.+++.. +.+.+++++||++|+..++... ..++++||+.++.|.+......... ..
T Consensus 63 ~~~Le~~iA~le-~~~~~~~~~sG~~Ai~~~l~al--l~~GD~Vvv~~~~Y~~t~~l~~~~l----------------~~ 123 (394)
T PRK09028 63 HFAFQAAIVELE-GGAGTALYPSGAAAISNALLSF--LKAGDHLLMVDSCYEPTRDLCDKIL----------------KG 123 (394)
T ss_pred HHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHhh----------------hh
Confidence 457777777776 4457889999999999988643 4567889999988865432211100 01
Q ss_pred CCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccc
Q 015230 158 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQ 237 (411)
Q Consensus 158 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~ 237 (411)
.+.++..++..+.+.+++.++ +++++|++|.+.|++|.+.+ +++|.++|++||+++++|++|+ .+ ...
T Consensus 124 ~Gi~v~~v~~~~~e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a---~p--~~~ 191 (394)
T PRK09028 124 FGIETTYYDPMIGEGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWA---SP--INS 191 (394)
T ss_pred cceEEEEECCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCcc---cc--ccC
Confidence 122333344446677887775 46889999998888888877 9999999999999999999997 21 112
Q ss_pred cccCCCcch--hhhhhhccC-C-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHH
Q 015230 238 EYFGVTPDL--TTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKI 313 (411)
Q Consensus 238 ~~~~~~~d~--~~~sK~~~~-G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~ 313 (411)
....+..|+ .+.+|+++| | ...|+++.+++..+.+.... .......+|..+......++-+ .-..++..++
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~---~~~G~~~~p~~a~l~~rgl~TL--~lR~~~~~~n 266 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS---YLMGQCTSPDDVYLAMRGLRTL--GVRLAQHEKN 266 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH---HhcCCCCCHHHHHHHHcccCcH--HHHHHHHHHH
Confidence 222334454 488999986 3 66777777777666554211 1112345667666665555433 3345667777
Q ss_pred HHHHHHHHHHHHH----hcCC-c---------eEEeeecceEEEEEe
Q 015230 314 TGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 346 (411)
Q Consensus 314 ~~~~~~~l~~~~~----~~~~-~---------~~~~~~g~~~~~~~~ 346 (411)
+..+.+.|++... .||. . ....+.|.++.|++.
T Consensus 267 a~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 267 ALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred HHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 7777777766421 1111 0 012356889999984
No 292
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1e-15 Score=143.94 Aligned_cols=239 Identities=15% Similarity=0.110 Sum_probs=148.0
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
......++.+.+++..+.. ..+.++||++|+..++... ..+++.|++..+.|.+...........
T Consensus 59 ~~p~~~~Le~~lA~~~g~~-~~i~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~t~~~~~~~~~~------------ 123 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGA-YGRAFSSGMAATDCLLRAV--LRPGDHIVIPNDAYGGTFRLIDKVFTR------------ 123 (388)
T ss_pred CCccHHHHHHHHHHHhCCC-ceEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchHHHHHHHHhCcC------------
Confidence 3455678888888887533 4455567899999999753 456788999888887543322111110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
.+..+..++..|++++++.++ +++++|+++..+|++|...+ +++|.++|++||++||+|++|+......
T Consensus 124 ----~gi~~~~~d~~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~~~~~ 192 (388)
T PRK07811 124 ----WGVEYTPVDLSDLDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASPYLQQ 192 (388)
T ss_pred ----CCeEEEEeCCCCHHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 112334444458899988886 35778888877777788877 9999999999999999999997221111
Q ss_pred CccccccCCCcchhhhhhhccC-C-ccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
. . ..+.+.-+.|++|+++| | .+.|+++++ +++.+.+.. .........++..++.+...++.+ +...++.
T Consensus 193 p--~-~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~L~tl--~~R~~~~ 264 (388)
T PRK07811 193 P--L-ALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF---LQNGAGAVPGPFDAYLTLRGLKTL--AVRMDRH 264 (388)
T ss_pred c--h-hhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhccCcH--HHHHHHH
Confidence 1 1 12222334588999986 4 567888764 666565542 111112334555555555544432 3445666
Q ss_pred HHHHHHHHHHHHHHHH----hcCCc-e---------EEeeecceEEEEEe
Q 015230 311 NKITGELTQGIIDAGK----KAGHA-I---------CGGYISGMFGFFFT 346 (411)
Q Consensus 311 ~~~~~~~~~~l~~~~~----~~~~~-~---------~~~~~g~~~~~~~~ 346 (411)
.++...+.+.|++... .+|.. . ...+.|.++.|++.
T Consensus 265 ~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 265 SENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred HHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 7777777777776420 11110 0 12356889999984
No 293
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.72 E-value=1.1e-15 Score=144.36 Aligned_cols=219 Identities=15% Similarity=0.114 Sum_probs=143.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.....+++.+.+++..+. +..+.++||+.|+..+++.. ..+++.||+..+.|.+.........
T Consensus 63 ~~p~~~~le~~lA~l~g~-~~~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y~~t~~~~~~~~-------------- 125 (403)
T PRK07503 63 SNPTLALLEQRMASLEGG-EAAVALASGMGAITATLWTL--LRPGDEVIVDQTLYGCTFAFLHHGL-------------- 125 (403)
T ss_pred CCchHHHHHHHHHHHhCC-CcEEEEcCHHHHHHHHHHHH--cCCCCEEEEccCccchHHHHHHHHH--------------
Confidence 455678888888888854 44677778999999988742 4567788887776643222111100
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
...+..+..++..|++++++.++ +++++|+++..+|++|...+ +++|.++|++||+++|+|++|+....+.
T Consensus 126 --~~~G~~v~~vd~~d~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~~~~~ 196 (403)
T PRK07503 126 --GEFGVTVRHVDLTDPAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTPYLQR 196 (403)
T ss_pred --hhCCEEEEEeCCCCHHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 00122344455558899988886 35778888887888888888 9999999999999999999997321111
Q ss_pred CccccccCCCcchhhhhhhccC-C-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
.. . ++.+.-+.|++|.+++ | .+.|+++.++++++.++.... ........+++.++.++..++.+ +...++..
T Consensus 197 ~l--~-~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~~-~~~~g~~~s~~~a~l~l~~L~tl--~~r~~~~~ 270 (403)
T PRK07503 197 PL--E-LGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEGL-KDMTGAVMSPFDAFLLMRGLKTL--ALRMDRHC 270 (403)
T ss_pred ch--h-hCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhhH-HhCcCCCCCHHHHHHHHcCcchH--HHHHHHHH
Confidence 11 1 2222234589999996 5 678888888888877752110 11123566778777777666544 23345555
Q ss_pred HHHHHHHHHHHHH
Q 015230 312 KITGELTQGIIDA 324 (411)
Q Consensus 312 ~~~~~~~~~l~~~ 324 (411)
++...+.+.|++.
T Consensus 271 ~na~~~a~~L~~~ 283 (403)
T PRK07503 271 ASAQAVAEWLARH 283 (403)
T ss_pred HHHHHHHHHHHhC
Confidence 6677777777654
No 294
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.2e-15 Score=143.74 Aligned_cols=238 Identities=16% Similarity=0.128 Sum_probs=151.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh-cCCCCcccCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDS 151 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 151 (411)
+.+...+.+.+.+++..+.. ..++++||++|+..++... ..+++.|++..+.|++........ ...
T Consensus 57 ~~~p~~~~Le~~lA~l~g~~-~~v~~~sG~~Ai~~~l~al--l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~---------- 123 (405)
T PRK08776 57 SGNPTRDLLGEALAELEGGA-GGVITATGMGAINLVLNAL--LQPGDTLVVPHDAYGGSWRLFNALAKKG---------- 123 (405)
T ss_pred CCChHHHHHHHHHHHHhCCC-ceEEEcCHHHHHHHHHHHH--hCCCCEEEEccCCchHHHHHHHHHHHhc----------
Confidence 34555688888898887654 4566777899998888643 456788999888887633221111 111
Q ss_pred CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-c
Q 015230 152 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 230 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~ 230 (411)
+..+..++..|++++++.++ +++++|+++..+|++|.+.+ +++|.++|++||+++|+||+|..- .
T Consensus 124 -------g~~v~~v~~~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~ 189 (405)
T PRK08776 124 -------HFALITADLTDPRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPAL 189 (405)
T ss_pred -------CcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 11233344448888988886 25677777766677888877 999999999999999999999721 1
Q ss_pred cccCccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChH
Q 015230 231 LAYGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 307 (411)
Q Consensus 231 ~g~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~ 307 (411)
. . ... ++.+.-+.|.+|.++| ++..|+++. ++++.+.+.... .......+++.+......++.+ +...
T Consensus 190 ~-~--pl~-~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~---~~~g~~~s~~~a~l~~~gl~tl--~~r~ 260 (405)
T PRK08776 190 Q-K--PLE-FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWA---NALGLTGSPFDAFLTLRGLRTL--DARL 260 (405)
T ss_pred C-C--ccc-ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHH---HhcCCCCCHHHHHHHHhhhCcH--HHHH
Confidence 1 1 111 2333334578899985 366888755 566766664211 1123346788888877666544 4456
Q ss_pred HHHHHHHHHHHHHHHHHHH----hcCCc----------eEEeeecceEEEEEe
Q 015230 308 EYLNKITGELTQGIIDAGK----KAGHA----------ICGGYISGMFGFFFT 346 (411)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~----~~~~~----------~~~~~~g~~~~~~~~ 346 (411)
++..++...+.+.|++... .+|.. ....+.|.++.|++.
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 261 RVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 7777788887777776420 01100 012456889999984
No 295
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=7e-16 Score=145.07 Aligned_cols=292 Identities=13% Similarity=0.019 Sum_probs=172.8
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+.+...+++.+.+++.. +.+++++++||++|+..++... ..+++.||+.++.|.+..........
T Consensus 62 ~~~pt~~~Le~~lA~l~-g~~~~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~~~~------------ 126 (394)
T PRK07050 62 HATPTSLALAQRLAEIE-GGRHALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEWLAR------------ 126 (394)
T ss_pred CCCHHHHHHHHHHHHHh-CCCeEEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHHHHH------------
Confidence 34555688888888887 4679999999999999999754 45678899988888764422111100
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
..+..+..++..+.+++++.++ +++++|+++.++|+.+...+ +++|.++|+++|+++|+|++|+ .+
T Consensus 127 ----~~Gi~v~~vd~~~~~~l~~~i~---~~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a---~~ 192 (394)
T PRK07050 127 ----DFGITVRFYDPLIGAGIADLIQ---PNTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYS---AG 192 (394)
T ss_pred ----hcCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCcc---cc
Confidence 0111233333335577877775 35778888877766676666 9999999999999999999996 22
Q ss_pred cCccccccCCCcchhhhhhhccCC--cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~G--~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
....--..|.+.-+.+++|.++|| .+.|++++ ++++++.++..+ .....+.++..+..+...++.+ ....++
T Consensus 193 ~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~---~~~G~~~~~~~a~l~lr~l~tl--~~Rl~~ 267 (394)
T PRK07050 193 LAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR---MRLGIGVSADDCSLVLRGLPSL--QVRLAA 267 (394)
T ss_pred cccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH---HhcCCCCCHHHHHHHHcCCCcH--HHHHHH
Confidence 111111123222244799999864 56887755 677777665321 1112344555544443333222 223455
Q ss_pred HHHHHHHHHHHHHHHHH----hcCCc----------eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC
Q 015230 310 LNKITGELTQGIIDAGK----KAGHA----------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 375 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 375 (411)
..++...+.+.|++... .+|.. ....+.|.++.|++... ....+..++.+.|+..+
T Consensus 268 ~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~----------~~~~~~~~~~~~l~~~~ 337 (394)
T PRK07050 268 HDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDER----------YSPAQVDAFVEALELFA 337 (394)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCC----------CCHHHHHHHHHcCCCCe
Confidence 55555566666655310 00100 01124466777777421 02345678888888777
Q ss_pred eEeccCCCcc---------------------eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 376 VYFAPSQFEA---------------------GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 376 i~v~~~~~~~---------------------~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+-++-|+... +|++. --|+.+.+++-|.+++..
T Consensus 338 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~sv--GlE~~~dl~~dl~~al~~ 391 (394)
T PRK07050 338 IGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYI--GLEDEADLIADLEQALEA 391 (394)
T ss_pred eccccCCccceEeeCcccccchhhcCCCCCEEEEEe--CcCCHHHHHHHHHHHHHH
Confidence 7665554332 33332 235666777777766654
No 296
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.72 E-value=1.2e-15 Score=142.39 Aligned_cols=236 Identities=14% Similarity=0.075 Sum_probs=146.2
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
+++....++.+.+++.. + ++++++++|++|+..++... ..++++|++.++.|++....+......
T Consensus 48 y~~p~~~~Le~~lA~l~-~-~~~v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l~~----------- 112 (366)
T PRK07582 48 ASNPTWRALEAALGELE-G-AEALVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYLAP----------- 112 (366)
T ss_pred CCCccHHHHHHHHHHHc-C-CCEEEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHHhc-----------
Confidence 34556678888888887 4 45666678899998888642 456688999899997644332111000
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 232 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g 232 (411)
.+.++..++.++... .. . +++++++++..+|++|.+.+ +++|.++|+++|+++|+|++|+.. .+
T Consensus 113 -----~G~~v~~v~~~~~~~--~~-~---~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~-~~ 176 (366)
T PRK07582 113 -----LGVTVREAPTAGMAE--AA-L---AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATP-LG 176 (366)
T ss_pred -----CeEEEEEECCCChHH--Hh-c---cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCc-cc
Confidence 112334444333221 11 1 35677888877777887777 999999999999999999999521 11
Q ss_pred cCccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
.. ..+ ++.+.-+.|++|+++| |+++||+++ ++++++.+.... .......+++.+..+...++.+ +...++
T Consensus 177 ~~-p~~-~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~---~~~g~~~~~~~a~l~~r~l~tl--~~R~~~ 249 (366)
T PRK07582 177 QR-PLE-LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWR---LLAGAIPGPFEAWLAHRSLGTL--GLRFAR 249 (366)
T ss_pred cC-chh-cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHH---HHhCCCCCHHHHHHHHhccccH--HHHHHH
Confidence 10 111 2322234589999975 688999976 567777665211 1223345677777666665533 334477
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ceEE---------eeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AICG---------GYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~~~---------~~~g~~~~~~~~ 346 (411)
..++...+.+.|++... .||. ..++ .+.|.++.|++.
T Consensus 250 ~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 250 QCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 77888888888877521 1111 1111 246888999884
No 297
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=1.3e-15 Score=142.20 Aligned_cols=238 Identities=16% Similarity=0.132 Sum_probs=151.1
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.+.....|.+.+++.. +.+++++++||++|+..++... ..+++.|++..+.|.+...........
T Consensus 51 ~npt~~~Le~~lA~le-g~e~ivvt~gg~~Ai~~~l~al--l~~Gd~Il~~~~~y~~~~~~~~~~~~~------------ 115 (388)
T PRK08861 51 GNPNRGLLEQTLSELE-SGKGAVVTNCGTSALNLWVSAL--LGPDDLIVAPHDCYGGTYRLFNTRANK------------ 115 (388)
T ss_pred CCchHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHH--cCCCCEEEEcCCchHHHHHHHHHHHhc------------
Confidence 4555678888888887 4689999999999999999743 456778888888887543322111110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-ccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 232 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g 232 (411)
.+..+..++..|+++++++++ +++++|+++.++|++|.+.+ +++|.++|+++|+++|+|++|. ++..
T Consensus 116 ----~gi~v~~vd~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~~- 183 (388)
T PRK08861 116 ----GDFKVQFVDQSDAAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVLQ- 183 (388)
T ss_pred ----CCeEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccccccC-
Confidence 011233333348888888876 36788888877888888888 9999999999999999999997 2211
Q ss_pred cCccccccCCCcchhhhhhhccC-C-cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 233 YGGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 233 ~~~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
.. . .+|.+.-+.|++|.++| + ...|++++ ++++.+.+.... .......+|..+...+..++-+ .-..++
T Consensus 184 ~p--l-~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~---~~~G~~~~p~~a~l~~rgl~Tl--~lR~~~ 255 (388)
T PRK08861 184 KP--L-ELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWG---NCIGATGTPFDSYMTLRGIRTL--GARMRV 255 (388)
T ss_pred CC--c-ccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHH---hccCCCCChHHHHHHHhcCCCH--HHHHHH
Confidence 11 1 12333334578999986 3 66788766 455655554211 1123445667666655554432 333456
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-c---------eEEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~---------~~~~~~g~~~~~~~~ 346 (411)
..+++..+.+.|++... .||. . ....+.|.++.|++.
T Consensus 256 ~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 256 HEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 66667777777765410 1111 0 012456889999984
No 298
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.71 E-value=5.4e-15 Score=139.62 Aligned_cols=325 Identities=12% Similarity=-0.003 Sum_probs=194.2
Q ss_pred CcHHHHHHHHHHHHcCCC----CCCCCHHHHHHHHHHHhhCC-C-C-CEEEE--eCChHHHHHHHHHHHHhc--c-----
Q 015230 53 ADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-S-I-EMVRF--VNSGTEACMGVLRLARAF--T----- 116 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~----~~~~~~~~~~l~~~l~~~~~-~-~-~~v~~--~~~g~~a~~~al~~~~~~--~----- 116 (411)
.+|++.+++...+..... .+...+.+++..+|+++.++ + . +++.+ |+|||||+..+|..++.. .
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 578899999888874211 12234778899999999997 3 2 45665 799999999999766421 1
Q ss_pred C---CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 117 G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 117 ~---~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
+ ....|+....-|.....+....|-.+.+++.....+.. |+++|++++++ ++.+|++..++
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~v-------------d~~~L~~~i~~---~t~lV~~t~g~ 196 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYVI-------------DPEQVVEAVDE---NTIGVVCILGT 196 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCceee-------------CHHHHHHHHhh---CCeEEEEEeCC
Confidence 1 12244555555544444444445444444432211111 89999999973 57789999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHh------CCEEEEecccccc-c---cccCccccccCCCcchhhh--hhhccCCccccc
Q 015230 194 GNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R---LAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGA 261 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~------~~~li~De~~~g~-~---~g~~~~~~~~~~~~d~~~~--sK~~~~G~~~g~ 261 (411)
+++|.+.| +++|.++|+++ ++++++|.+|+|+ . .+.. ..+......|.+++ -|++.+...+|+
T Consensus 197 t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~-~~~~~~~~~DSis~s~HK~~~~P~g~G~ 271 (431)
T TIGR01788 197 TYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL-EWDFRLPRVKSINVSGHKYGLVYPGVGW 271 (431)
T ss_pred CCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc-hhhcCCCCceEEEECchhccCCCCCcEE
Confidence 99999999 99999999999 9999999999865 2 2211 11111113455554 487644334788
Q ss_pred ccccHH--HHHHhcCCCCcccc----cCCCCCHH--HHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCC
Q 015230 262 YGGRRD--IMEMVAPAGPMYQA----GTLSGNPL--AMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGH 330 (411)
Q Consensus 262 ~~~~~~--~~~~~~~~~~~~~~----~t~~~~~~--~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (411)
++.+++ +.+.+.....+..+ .+...+.. ........+..+.. +++.++..++.+++.++|++. +.
T Consensus 272 l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~----~~ 347 (431)
T TIGR01788 272 VIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKL----GP 347 (431)
T ss_pred EEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhC----CC
Confidence 876543 32333211011100 11211211 11122223332222 566677778888888887765 32
Q ss_pred ce-EEe-eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------cceee--ecCCCHHHHHH
Q 015230 331 AI-CGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLAHSSDDIQH 399 (411)
Q Consensus 331 ~~-~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------~~~~~--~~~~t~~~i~~ 399 (411)
.. ... +...++.|.+.... +...+..++.+.|.++|+.+..... ..+|+ ...++++.++.
T Consensus 348 ~el~~~~~~~~iV~Fr~~~~~---------~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~ 418 (431)
T TIGR01788 348 FEIISDGSGIPLVAFKLKDDA---------DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAEL 418 (431)
T ss_pred EEEeeCCCCceEEEEEeCCCC---------CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHH
Confidence 21 111 24556666664321 0112346789999999987533221 12344 45678899999
Q ss_pred HHHHHHHHHHhC
Q 015230 400 TITAAEKVLRQI 411 (411)
Q Consensus 400 ~i~~l~~~~~~~ 411 (411)
+++.|.+++.++
T Consensus 419 ~~~~~~~~~~~~ 430 (431)
T TIGR01788 419 LIEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHHhh
Confidence 999999988654
No 299
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.70 E-value=2.3e-15 Score=139.96 Aligned_cols=229 Identities=15% Similarity=0.103 Sum_probs=148.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.....++.+.+++.. +.++++.++||++|+.+++. .+.++++||+..+.|.+........... .++
T Consensus 53 ~p~~~~le~~lA~le-g~~~~v~~~sG~aAi~~~l~---~l~~GD~VI~~~~~yg~~~~~~~~~~~~----------~~~ 118 (364)
T PRK07269 53 NPTRAKLEETLAAIE-SADYALATSSGMSAIVLAFS---VFPVGSKVVAVRDLYGGSFRWFNQQEKE----------GRF 118 (364)
T ss_pred CccHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHH---HhCCCCEEEEecCCcCchHHHHHHHHhc----------CcE
Confidence 444677777777777 67899999999999999885 3456788998888776543211111000 000
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
.+... .|++++++.++ +++++|+++.++|++|...+ +++|.++|+++|+++|+|+++..-
T Consensus 119 ------~~~~~--~d~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~----- 178 (364)
T PRK07269 119 ------HFTYA--NTEEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSP----- 178 (364)
T ss_pred ------EEEec--CCHHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-----
Confidence 01111 27889988886 35778888887777888887 999999999999999999998511
Q ss_pred ccccccCCCcch--hhhhhhccC-C-cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 235 GAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 235 ~~~~~~~~~~d~--~~~sK~~~~-G-~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
......+...|+ .|++|.++| | .-.|++++ ++++.+.++.. ........+++.++.+...|+.+ +...++
T Consensus 179 ~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~---~~~~G~~~s~~~a~l~~~~L~tL--~~r~~~ 253 (364)
T PRK07269 179 IYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN---LNTTGAVLSPFDSYLLMRGLKTL--SLRMER 253 (364)
T ss_pred ccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH---HHHhCCCCCHHHHHHHHcCCCcH--HHHHHH
Confidence 111122334454 478899986 4 33567666 46666666421 11112456778777777766543 444566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCce--EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~--~~~~~g~~~~~~~~ 346 (411)
.+++..++.+.|++. |.+. ..++.|.++.|++.
T Consensus 254 ~~~na~~~a~~L~~~----p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 254 STANAQEVVAFLKKS----PAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHHHHHHHHhC----CCccEEeCCCcCcEEEEEEC
Confidence 677777777776653 4322 22466888899883
No 300
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.69 E-value=5.3e-15 Score=138.38 Aligned_cols=302 Identities=17% Similarity=0.160 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh
Q 015230 55 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 134 (411)
Q Consensus 55 ~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 134 (411)
.+.++++.+.++++.. .......+++.+.+++.+ +..+++.++||+.|+.++++++ ...+++.||+..-+|++.. .
T Consensus 5 ~e~~~~v~~~l~s~~~-~~~g~~~~~fE~~~a~~~-g~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~~-~ 80 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWL-STYGPYVEEFEKEFAEYF-GVKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPATA-S 80 (363)
T ss_dssp HHHHHHHHHHHHHTCC-SSSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THHH-H
T ss_pred HHHHHHHHHHHHhCCc-cCCCHHHHHHHHHHHHHh-CCCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHHH-H
Confidence 4667888888888632 222455566666666666 7889999999999999999863 5667899999988888543 3
Q ss_pred hhhhcCCCCcccCCC-CCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHH
Q 015230 135 FLVKAGSGVATLGLP-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 213 (411)
Q Consensus 135 ~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~ 213 (411)
+....|..++...+. ....+ |++++++.++ +++++|++.+.. |...+ +++|.++|
T Consensus 81 ai~~~G~~pv~~Di~~~~~~i--------------d~~~~~~~i~---~~t~ai~~~h~~---G~~~d----~~~i~~~~ 136 (363)
T PF01041_consen 81 AILWAGAEPVFVDIDPETLNI--------------DPEALEKAIT---PKTKAILVVHLF---GNPAD----MDAIRAIA 136 (363)
T ss_dssp HHHHTT-EEEEE-BETTTSSB---------------HHHHHHHHH---TTEEEEEEE-GG---GB-------HHHHHHHH
T ss_pred HHHHhccEEEEEeccCCcCCc--------------CHHHHHHHhc---cCccEEEEecCC---CCccc----HHHHHHHH
Confidence 444445544444432 22222 8999999998 356888777665 44445 99999999
Q ss_pred HHhCCEEEEeccccccccccCccccccCCCcchhhhh----hhccCCccccccccc-HHHHHHhcC---CC------Ccc
Q 015230 214 KENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAP---AG------PMY 279 (411)
Q Consensus 214 ~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~s----K~~~~G~~~g~~~~~-~~~~~~~~~---~~------~~~ 279 (411)
++||++||.|.+|+ .|..+.-...|-.-|+.+|| |.+++| -.|+++++ +++.+.++. .. ..+
T Consensus 137 ~~~~i~lIeD~a~a---~g~~~~g~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 212 (363)
T PF01041_consen 137 RKHGIPLIEDAAQA---FGARYKGRPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFRRY 212 (363)
T ss_dssp HHTT-EEEEE-TTT---TT-EETTEETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTT
T ss_pred HHcCCcEEEccccc---cCceeCCEeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccccccc
Confidence 99999999999997 22111111222233555444 888743 24666664 555555432 11 001
Q ss_pred -----cccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEe-------eecceEEEEEec
Q 015230 280 -----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-------YISGMFGFFFTE 347 (411)
Q Consensus 280 -----~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------~~g~~~~~~~~~ 347 (411)
.+..+..+.+.++.++..|+.+ ++..++-+++..++.+.|.+. +...... .....+.+.+.+
T Consensus 213 ~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~----~~~~~~~~~~~~~~~~~~~f~i~~~~ 286 (363)
T PF01041_consen 213 RHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGI----PGIKPPPIPDGAERSSYYRFPIRLPD 286 (363)
T ss_dssp EESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTG----TTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred cccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcC----CCcccccccccccccccccccccccc
Confidence 2335677888888888877655 445566666777777777665 3221111 112223333321
Q ss_pred CCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-cc---------------------------eeee--cCCCHHHH
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EA---------------------------GFTS--LAHSSDDI 397 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-~~---------------------------~~~~--~~~t~~~i 397 (411)
.. ....+.+.+.|.++||-+.+... +. +.+| ...+++++
T Consensus 287 ~~-----------~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv 355 (363)
T PF01041_consen 287 EA-----------LADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDV 355 (363)
T ss_dssp CG-----------CSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHH
T ss_pred cc-----------cchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHH
Confidence 10 01247899999999999877531 10 3443 56689999
Q ss_pred HHHHHHHH
Q 015230 398 QHTITAAE 405 (411)
Q Consensus 398 ~~~i~~l~ 405 (411)
+.+++.|+
T Consensus 356 ~~I~~~ir 363 (363)
T PF01041_consen 356 DYIAEAIR 363 (363)
T ss_dssp HHHHHHHH
T ss_pred HHHhhccC
Confidence 99998875
No 301
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=2.8e-15 Score=140.41 Aligned_cols=285 Identities=12% Similarity=0.077 Sum_probs=174.1
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++.++. +++++++||+.|+..++. ...+++.|++.++.|.+..........
T Consensus 46 ~p~~~~le~~la~l~g~-~~~l~~~sG~~al~~~l~---ll~~Gd~Vl~~~~~y~~~~~~~~~~~~-------------- 107 (378)
T TIGR01329 46 NPTRTALESLLAKLDKA-DRAFAFSSGMAALDVITR---LLNNGDEIIAGDDLYGGTDRLLTQVVP-------------- 107 (378)
T ss_pred ChHHHHHHHHHHHHhCC-CcEEEECCHHHHHHHHHH---HhCCCCEEEEcCCCchHHHHHHHHHHH--------------
Confidence 34467888888888754 677888889999887665 345677888888877653322111100
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cccccc
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~ 233 (411)
..+..+..++..|+++++++++ +++++|+++.+.|+.|.+.+ +++|.++|++||+++|+|++|. +.. ..
T Consensus 108 --~~G~~v~~vd~~d~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~~~-~~ 177 (378)
T TIGR01329 108 --RSGVVVVHVDTTDLDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSPLL-CN 177 (378)
T ss_pred --HcCcEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccccc-CC
Confidence 0122344444558899998886 46789999988888898888 9999999999999999999995 211 11
Q ss_pred CccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
. . .++.+.-+.+++|+++| +...|++++ ++.+.+.+... ........++..++.....++.+ +...++.
T Consensus 178 ~--l-~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~---~~~~G~~~~~~~a~l~~~~l~tl--~~R~e~~ 249 (378)
T TIGR01329 178 P--L-ELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFL---QNSTGSGLAPFDCWLLLRGIKTL--AIRIEKQ 249 (378)
T ss_pred h--h-hcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHH---HHhcCCcCCHHHHHHHHccCCCH--HHHHHHH
Confidence 1 1 12333334578999985 366888876 45555555421 11112334555554433333222 3345566
Q ss_pred HHHHHHHHHHHHHHHH----hcCCc-e---------EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCe
Q 015230 311 NKITGELTQGIIDAGK----KAGHA-I---------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 376 (411)
Q Consensus 311 ~~~~~~~~~~l~~~~~----~~~~~-~---------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi 376 (411)
.++...+.+.|++... .+|.. . ...+.|.++.|++. ....+.++...|...++
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~-------------~~~~~~~~~~~L~~~~i 316 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETG-------------SVALSKRLVEATKLFSI 316 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEEC-------------CHHHHHHHHHhCcCccc
Confidence 6666666666664311 00100 0 12346778888882 12335678888876677
Q ss_pred EeccCCCcc---------------------------eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 377 YFAPSQFEA---------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 377 ~v~~~~~~~---------------------------~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.++.|+... +|++ .--|+.+.+++-|++++++
T Consensus 317 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~s--vGlE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 317 TVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLS--VGIEDVDDLISDLDIAFVT 375 (378)
T ss_pred ccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEE--eccCCHHHHHHHHHHHHHh
Confidence 777765433 2222 2235667777777777764
No 302
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=5.2e-15 Score=140.19 Aligned_cols=217 Identities=19% Similarity=0.183 Sum_probs=139.2
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.....++.+.+++..+ .+..++++||++|+..++... ..+++.|++..+.|++.........
T Consensus 57 ~pt~~~Le~~lA~l~g-~~~~l~~ssG~~Ai~~al~al--~~~Gd~Vl~~~~~Y~~t~~~~~~~l--------------- 118 (425)
T PRK06084 57 NPTNDVLEQRVAALEG-GVGALAVASGMAAITYAIQTI--AEAGDNIVSVAKLYGGTYNLLAHTL--------------- 118 (425)
T ss_pred CchHHHHHHHHHHHhC-CCceeEehhHHHHHHHHHHHH--hCCCCEEEEeCCCcchHHHHHHHhc---------------
Confidence 4556788888888885 456778889999999999743 3456789998888886443221110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
...+.++..++..|++++++.++. ++++|++++++|++|.+.+ +++|.++|++||++||+|++|+. +..
T Consensus 119 -~~~gi~v~~~d~~d~e~le~ai~~---~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~---~~~ 187 (425)
T PRK06084 119 -PRIGIETRFAAHDDIAALEALIDE---RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVAT---PVL 187 (425)
T ss_pred -ccceeEEEEECCCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc---ccc
Confidence 001123344555689999998873 5778888988888999888 99999999999999999999972 111
Q ss_pred ccccccCCCcc--hhhhhhhccC-Ccccccccc-cHHH-HHHh-------cCCCCc-----------------------c
Q 015230 235 GAQEYFGVTPD--LTTLGKIIGG-GLPVGAYGG-RRDI-MEMV-------APAGPM-----------------------Y 279 (411)
Q Consensus 235 ~~~~~~~~~~d--~~~~sK~~~~-G~~~g~~~~-~~~~-~~~~-------~~~~~~-----------------------~ 279 (411)
........| +.|++|+++| |.++|+++. +... .... ....+. .
T Consensus 188 --~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 265 (425)
T PRK06084 188 --CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPL 265 (425)
T ss_pred --CChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHH
Confidence 111222345 4589999996 678777654 3321 1110 000000 0
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH
Q 015230 280 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 280 ~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (411)
.......++..++..+..++.+ +...++..++...+.+.|++.
T Consensus 266 ~~~g~~l~~~~a~l~lrgl~tl--~~R~~~~~~na~~la~~L~~~ 308 (425)
T PRK06084 266 RNMGAALSPFNAFLILQGLETL--ALRMERHTENALKVARYLQQH 308 (425)
T ss_pred HhcCCCCCHHHHHHHHcCcCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 1112345566666555554433 445667777777888888765
No 303
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.69 E-value=6.7e-15 Score=140.03 Aligned_cols=306 Identities=15% Similarity=0.122 Sum_probs=178.6
Q ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHH-------hccCCcEEEEEeCCcC
Q 015230 57 VLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR-------AFTGRERIIKFEGCYH 129 (411)
Q Consensus 57 v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~-------~~~~~~~vi~~~~~~~ 129 (411)
..+++.+.+..+....+ ....++.+.+++.+ +.+++++++||++|+..++.++. ...+++.||+..++|.
T Consensus 46 ~~~a~~~~~~~~~~~~G--~~~~~fe~~lA~~~-g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~ 122 (438)
T PRK15407 46 ELQNLVDASLDFWLTTG--RFNDAFEKKLAEFL-GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFP 122 (438)
T ss_pred HHHHHHHHHHhCcccCC--hhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcH
Confidence 34555566655332222 23455666666666 55689999999999999997542 2355788999999987
Q ss_pred CCchhhhhhcCCCCcccCCCC-CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHH
Q 015230 130 GHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 208 (411)
Q Consensus 130 ~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~ 208 (411)
+..... ...|..+..++... .... |++++++.+. +++++|++++.. |...+ +++
T Consensus 123 a~~~~v-~~~G~~pv~vdvd~~~~~i--------------d~~~le~~i~---~~tkaVi~~~~~---G~p~d----l~~ 177 (438)
T PRK15407 123 TTVNPI-IQNGLVPVFVDVELPTYNI--------------DASLLEAAVS---PKTKAIMIAHTL---GNPFD----LAA 177 (438)
T ss_pred HHHHHH-HHcCCEEEEEecCCCcCCc--------------CHHHHHHHcC---cCCeEEEEeCCC---CChhh----HHH
Confidence 654433 33344333322211 1111 7899998876 357777777643 33344 999
Q ss_pred HHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcchhhhh----hhccCCccccccccc-HHHHHHhc---CCCC-
Q 015230 209 IRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVA---PAGP- 277 (411)
Q Consensus 209 i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d~~~~s----K~~~~G~~~g~~~~~-~~~~~~~~---~~~~- 277 (411)
|.++|++||++||+|++|+ |- ..|.. .|-.-|+.+|| |.+..| ..|+++++ +++.+.++ ....
T Consensus 178 I~~la~~~gi~vIeDaa~a~G~~~~g~~-----~G~~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~~~G~~ 251 (438)
T PRK15407 178 VKAFCDKHNLWLIEDNCDALGSTYDGRM-----TGTFGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFRDWGRD 251 (438)
T ss_pred HHHHHHHCCCEEEEECccchhhhcCCee-----eeccCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHHHhCcc
Confidence 9999999999999999997 32 22211 12222555444 666633 34777665 44443322 1000
Q ss_pred ----------------------------c----ccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Q 015230 278 ----------------------------M----YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 278 ----------------------------~----~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
. ..+..+..+.+.++.++..|+.+ ++..++-+++.+++.+.|.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~ 329 (438)
T PRK15407 252 CWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLE 329 (438)
T ss_pred cccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCC
Confidence 0 02334566778888888888766 4566777777777777776541
Q ss_pred HhcCCceEEee-ecc--eEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--------------C--c--
Q 015230 326 KKAGHAICGGY-ISG--MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------------F--E-- 384 (411)
Q Consensus 326 ~~~~~~~~~~~-~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--------------~--~-- 384 (411)
..........+ ... .+.+.+.+. .....+++.+.|.++||-+.+.. . .
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~i~~~~~-----------~~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~ 398 (438)
T PRK15407 330 DFLILPEATPNSDPSWFGFPITVKED-----------AGFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGE 398 (438)
T ss_pred CccccCcCCCCCeeEEEEEEEEECCc-----------CCCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCC
Confidence 00001111111 111 222333211 01123689999999999654210 0 0
Q ss_pred ----------ceeee--cCCCHHHHHHHHHHHHHHHH
Q 015230 385 ----------AGFTS--LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 385 ----------~~~~~--~~~t~~~i~~~i~~l~~~~~ 409 (411)
.+.+| ...|+++++..++.|+++++
T Consensus 399 ~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 399 LTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred ChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 03444 35689999999999998764
No 304
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=6.1e-15 Score=138.32 Aligned_cols=214 Identities=14% Similarity=0.074 Sum_probs=138.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.....++.+.+++.++ .+++++++||+.|+..++... ..+++.|++..+.|++...........
T Consensus 52 np~~~~lE~~lA~l~g-~~~~l~~~sG~~Ai~~~l~~l--l~~GD~Vlv~~~~y~~~~~~~~~~~~~------------- 115 (385)
T PRK08574 52 NPTLRPLEEALAKLEG-GVDALAFNSGMAAISTLFFSL--LKAGDRVVLPMEAYGTTLRLLKSLEKF------------- 115 (385)
T ss_pred CccHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHHHHHhhcc-------------
Confidence 4456778888888874 457788899999999988642 456788888888887644332211111
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cccccc
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~ 233 (411)
+.++..+. .|++++++.++. .++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+ ++.. .
T Consensus 116 ----g~~v~~~~-~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~~-~ 183 (385)
T PRK08574 116 ----GVKVVLAY-PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLLY-R 183 (385)
T ss_pred ----CcEEEEEC-CCHHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC-C
Confidence 11121221 267888888863 26788889988888898888 9999999999999999999996 3211 1
Q ss_pred CccccccCCCcchhhhhhhccC-Ccc-cccc-cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLP-VGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~-~g~~-~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
.. .+|.+.-+.|++|+++| |-. .|++ ..++++.+.+..... ......+++.++.+...++.+ +...++.
T Consensus 184 --~l-~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~---~~g~~~~p~~a~l~l~~l~tL--~~R~~~~ 255 (385)
T PRK08574 184 --PL-RHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRR---RLGTIMQPFEAYLVLRGLKTL--EVRFERQ 255 (385)
T ss_pred --hh-hhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHH---hcCCCCCHHHHHHHHcccCcH--HHHHHHH
Confidence 11 13333335589999986 544 4545 446777776652211 123345667666666665544 3344556
Q ss_pred HHHHHHHHHHHHHH
Q 015230 311 NKITGELTQGIIDA 324 (411)
Q Consensus 311 ~~~~~~~~~~l~~~ 324 (411)
.++..++.+.|++.
T Consensus 256 ~~na~~la~~L~~~ 269 (385)
T PRK08574 256 CRNAMAIAEFLSEH 269 (385)
T ss_pred HHHHHHHHHHHHcC
Confidence 66777777777654
No 305
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.68 E-value=5.4e-15 Score=140.43 Aligned_cols=162 Identities=18% Similarity=0.165 Sum_probs=115.8
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.....+++.+.+++..+ .+..++++||++|+..++... ..+++.|++..+.|++..........
T Consensus 55 ~~p~~~~le~~lA~l~g-~~~~v~~~sG~~Ai~~al~~l--~~~Gd~Vl~~~~~y~~t~~~~~~~~~------------- 118 (418)
T TIGR01326 55 MNPTTDVLEQRIAALEG-GVAALAVASGQAAITYAILNL--AQAGDNIVSSSYLYGGTYNLFKHTLK------------- 118 (418)
T ss_pred CChhHHHHHHHHHHHhC-CCeEEEEccHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHHHH-------------
Confidence 45556889999988885 467899999999999999743 34567888988888764332211100
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
..+..+..++.+|++++++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+. +.
T Consensus 119 ---~~G~~v~~v~~~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~---~~ 185 (418)
T TIGR01326 119 ---RLGIEVRFVDPDDPEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFAT---PY 185 (418)
T ss_pred ---HcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCch---hh
Confidence 0112344444558899998886 35778888888888888888 99999999999999999999961 11
Q ss_pred CccccccCCCcch--hhhhhhccC-CcccccccccH
Q 015230 234 GGAQEYFGVTPDL--TTLGKIIGG-GLPVGAYGGRR 266 (411)
Q Consensus 234 ~~~~~~~~~~~d~--~~~sK~~~~-G~~~g~~~~~~ 266 (411)
........+|+ .|++|++++ |+|+|++++++
T Consensus 186 --~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 186 --LCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred --cCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 11112223454 489999996 89999987654
No 306
>PLN02509 cystathionine beta-lyase
Probab=99.67 E-value=6.3e-15 Score=139.95 Aligned_cols=210 Identities=13% Similarity=0.154 Sum_probs=138.6
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhh---hhcCCCCcccCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDS 151 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~ 151 (411)
....+++.+++++.. +.+.+++++||+.|+..++. ...+++.||+.++.|++...... ...|.
T Consensus 132 npt~~aLE~~lA~le-g~e~ai~~~SG~aAi~~il~---ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~---------- 197 (464)
T PLN02509 132 NPTRDALESLLAKLD-KADRAFCFTSGMAALSAVTH---LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV---------- 197 (464)
T ss_pred CHHHHHHHHHHHHHh-CCCEEEEeCcHHHHHHHHHH---HhCCCCEEEEcCCchhhHHHHHHHHHHHCCe----------
Confidence 456788999998887 55677788889988865553 34567889998888876432211 11122
Q ss_pred CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccc
Q 015230 152 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 231 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~ 231 (411)
.+..++..|++++++.++ +++++|+++.++|+.|.+.+ +++|.++|++||+++|+|++|+....
T Consensus 198 ---------~v~~vd~~d~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~~~ 261 (464)
T PLN02509 198 ---------VVKRVNTTNLDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSPVL 261 (464)
T ss_pred ---------EEEEeCCCCHHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccccc
Confidence 233444558888888875 46788999998888888877 99999999999999999999961111
Q ss_pred ccCccccccCCCcch--hhhhhhccC-C-ccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCCh
Q 015230 232 AYGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 306 (411)
Q Consensus 232 g~~~~~~~~~~~~d~--~~~sK~~~~-G-~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~ 306 (411)
+. ..+...|+ .|++|+++| | .-.|.++++ +.+.+.+.... .......++..++.++..++.+ +..
T Consensus 262 ~~-----pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~---~~~g~~l~p~~A~l~lr~L~tL--~~R 331 (464)
T PLN02509 262 SR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ---NSEGSGLAPFDCWLCLRGIKTM--ALR 331 (464)
T ss_pred CC-----hhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH---HhcCCCcCHHHHHHHHhhhhhH--HHH
Confidence 11 11223454 578999986 4 335555553 43444332100 1112234777777777777665 345
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 015230 307 YEYLNKITGELTQGIIDA 324 (411)
Q Consensus 307 ~~~~~~~~~~~~~~l~~~ 324 (411)
.++.+++..++.+.|++.
T Consensus 332 ~~r~~~nA~~la~~L~~~ 349 (464)
T PLN02509 332 IEKQQENARKIAMYLSSH 349 (464)
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 677788888888888764
No 307
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.67 E-value=3.1e-14 Score=144.88 Aligned_cols=302 Identities=14% Similarity=0.136 Sum_probs=191.5
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChH----HHHHHHHHHHHhccC--CcEEEEEeCCcCCCchhhhhhcCCCCcccCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGT----EACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGL 148 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~----~a~~~al~~~~~~~~--~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~ 148 (411)
.+...++.+++++.+ +.+.|.|+++++ +|+..+++..+...+ +.++|+.+.+-|+.....+...|-.+..++.
T Consensus 567 ~~~~~~~r~~la~i~-g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~ 645 (993)
T PLN02414 567 QEMFEDLGDLLCEIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGT 645 (993)
T ss_pred HHHHHHHHHHHHHHh-CCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEecc
Confidence 455678888888888 569999999888 788888876543322 1236777778888777777776666666554
Q ss_pred CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc
Q 015230 149 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228 (411)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g 228 (411)
. ..+.. |+++|++.++.+.+++++|++...++.+|...+ +++|.++|+++|+++++|.++.
T Consensus 646 d-~~G~v-------------Dle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~- 706 (993)
T PLN02414 646 D-AKGNI-------------NIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANM- 706 (993)
T ss_pred C-CCCCc-------------CHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCH-
Confidence 3 22322 999999999866567899999888888898888 9999999999999999999995
Q ss_pred cccccCccccccCCCcchhh--hhhhcc----CCcc-cccccccHHHHHHhcCCC---Cc------cc--ccCCC----C
Q 015230 229 FRLAYGGAQEYFGVTPDLTT--LGKIIG----GGLP-VGAYGGRRDIMEMVAPAG---PM------YQ--AGTLS----G 286 (411)
Q Consensus 229 ~~~g~~~~~~~~~~~~d~~~--~sK~~~----~G~~-~g~~~~~~~~~~~~~~~~---~~------~~--~~t~~----~ 286 (411)
.+............|+++ ..|+|+ +|-| +|.+.+++++...+.... .. .. ..+.. +
T Consensus 707 --~a~~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g 784 (993)
T PLN02414 707 --NAQVGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWG 784 (993)
T ss_pred --HhccCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhh
Confidence 111011111123346654 468776 2334 888888887766654210 00 00 01211 2
Q ss_pred CHHHHHHHHHHHHHHhcCCh---HHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc-e--EEEEEecCCCCCcchhcccc
Q 015230 287 NPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISG-M--FGFFFTEGPVYNFEDAKKSE 360 (411)
Q Consensus 287 ~~~~~a~~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~ 360 (411)
+.+.+..+...+..+..+.+ .++...+.+|++++|++. ++.... ...|. + +.+.+... + ...
T Consensus 785 ~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~~-~~~~~~~hEfv~~~~~l--~------~~~ 852 (993)
T PLN02414 785 SALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLFR-GKNGTCAHEFIIDLRPF--K------NTA 852 (993)
T ss_pred hHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCcccc-CCCCCeeeeEEEecccc--c------ccc
Confidence 22444445555555554444 677888899999999773 232221 11122 1 11122100 0 001
Q ss_pred hHHHHHHHHHHHHcCeEeccCC---Ccceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 361 TTKFARFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 361 ~~~~~~~~~~l~~~Gi~v~~~~---~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+.....+.+.|.+.||...... ...+++ .-..+++|||++++++..+..+
T Consensus 853 g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 853 GIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREE 907 (993)
T ss_pred CCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 1233678999999999875422 223444 4677999999999999887654
No 308
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.6e-14 Score=136.94 Aligned_cols=160 Identities=18% Similarity=0.159 Sum_probs=112.8
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
......|.+.+++..+ .+..++++||+.|+..++... ..+++.|++..+.|++..........
T Consensus 63 ~p~~~~Le~~lA~leg-~~~al~~~sG~~Ai~~al~~l--l~~GD~Vlv~~~~y~~t~~~~~~~~~-------------- 125 (431)
T PRK08248 63 NPTTDVFEKRIAALEG-GIGALAVSSGQAAITYSILNI--ASAGDEIVSSSSLYGGTYNLFAHTLP-------------- 125 (431)
T ss_pred CchHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCchhhHHHHHHHHHH--------------
Confidence 4456788888888875 568889999999999998643 45678888888888765433211110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
..+.++..++..|++++++.++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+|++++ .+..
T Consensus 126 --~~Gv~v~~vd~~d~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a---~~~~ 193 (431)
T PRK08248 126 --KLGITVKFVDPSDPENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFA---SPYL 193 (431)
T ss_pred --hCCEEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCC---cccc
Confidence 0122344445558899998886 35778888887788899998 9999999999999999999996 1111
Q ss_pred c-cccccCCCcchhhhhhhccC-Ccccccccc
Q 015230 235 G-AQEYFGVTPDLTTLGKIIGG-GLPVGAYGG 264 (411)
Q Consensus 235 ~-~~~~~~~~~d~~~~sK~~~~-G~~~g~~~~ 264 (411)
. .. .++.+.-+.|++|.++| |.++|+++.
T Consensus 194 ~~pl-~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 194 LRPI-EHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred CChh-HcCCCEEEEcCccccCCCCCceEEEEE
Confidence 0 11 23333334578999996 778887754
No 309
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=6.1e-15 Score=140.10 Aligned_cols=239 Identities=17% Similarity=0.146 Sum_probs=148.9
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
......+.+.+++..+ .+..++++||++|+..+++.. ..+++.||+....|++.........
T Consensus 62 ~p~~~~le~~lA~l~g-~~~al~~~SG~~Ai~~al~al--l~pGd~VIv~~~~y~~t~~~~~~~~--------------- 123 (427)
T PRK05994 62 NPTNAVLEERVAALEG-GTAALAVASGHAAQFLVFHTL--LQPGDEFIAARKLYGGSINQFGHAF--------------- 123 (427)
T ss_pred CccHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCcchhHHHHHHHHH---------------
Confidence 4456788888888885 445888899999999998753 4567889999999887532211100
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
...+..+..++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++++. +
T Consensus 124 -~~~G~~v~~vd~~d~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~---~-- 190 (427)
T PRK05994 124 -KSFGWQVRWADADDPASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS---P-- 190 (427)
T ss_pred -HhcCcEEEEECCCCHHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc---c--
Confidence 00122344455558899998886 36789999988888999988 99999999999999999999971 1
Q ss_pred ccccccCCCcchh--hhhhhccC-Cccccccccc-HH-----------------------HHHHhc-------CCCCccc
Q 015230 235 GAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR-RD-----------------------IMEMVA-------PAGPMYQ 280 (411)
Q Consensus 235 ~~~~~~~~~~d~~--~~sK~~~~-G~~~g~~~~~-~~-----------------------~~~~~~-------~~~~~~~ 280 (411)
.........+|++ |++|.++| |-.+|+++.. .. +.+.+. .......
T Consensus 191 ~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (427)
T PRK05994 191 YLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLR 270 (427)
T ss_pred ccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHH
Confidence 1112223455654 78999986 5456654331 11 111000 0000000
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH----hcCCc-e---------E-EeeecceEEEEE
Q 015230 281 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAGHA-I---------C-GGYISGMFGFFF 345 (411)
Q Consensus 281 ~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~-~---------~-~~~~g~~~~~~~ 345 (411)
......+++.++.+...++.+ +...++..++...+.+.|++... .||.. . . ..+.|.++.|++
T Consensus 271 ~~G~~~~~~~A~l~~~~l~tL--~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~sf~l 348 (427)
T PRK05994 271 DLGPAISPFNAFLILTGIETL--PLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFTFGL 348 (427)
T ss_pred hcCCCCCHHHHHHHHcCcccH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEEEEe
Confidence 112235666666666555433 44556777777788788776521 11111 0 0 245678899988
Q ss_pred e
Q 015230 346 T 346 (411)
Q Consensus 346 ~ 346 (411)
.
T Consensus 349 ~ 349 (427)
T PRK05994 349 K 349 (427)
T ss_pred c
Confidence 4
No 310
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.67 E-value=4.9e-14 Score=136.17 Aligned_cols=318 Identities=16% Similarity=0.127 Sum_probs=181.0
Q ss_pred CCcHHHHHHHHHHH--HcCCCCC------CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHh--cc----C
Q 015230 52 HADDQVLAALGETM--KKGTSFG------APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA--FT----G 117 (411)
Q Consensus 52 ~~~~~v~~a~~~~l--~~~~~~~------~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~--~~----~ 117 (411)
+.+|.+.+++.+.. .....|+ +..+.+.++.+++++.++-.+..++.++|+.+...++.+++. .. +
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~ 160 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTK 160 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCC
Confidence 46788888887752 2222331 224667888888988886223344445666665554433322 22 2
Q ss_pred CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 118 RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
+++|++.++.|+. +...+...|..+..++... .+.. |++++++.++ +++++++++..+ .+|
T Consensus 161 ~~~Vlv~~~~hp~-~~~~~~~~G~~vv~v~~~~-~~~~-------------D~e~L~~~i~---~~t~~V~v~~Pn-~tG 221 (481)
T PRK04366 161 RTEVIVPDSAHGT-NPASAAMAGFKVVEIPSNE-DGLV-------------DLEALKAAVG---EDTAALMLTNPN-TLG 221 (481)
T ss_pred CCEEEEcCCccHh-HHHHHHHcCCEEEEeecCC-CCCc-------------CHHHHHhhcc---cCCeEEEEeCCC-Ccc
Confidence 3477787776654 4444455555554443321 1111 8899988886 245665555434 566
Q ss_pred cc-CCCHHHHHHHHHHHHHhCCEEEEecccc-ccccccCccccccCCCcchh--hhhhhccC----Ccc-cccccccHHH
Q 015230 198 FI-APKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGG----GLP-VGAYGGRRDI 268 (411)
Q Consensus 198 ~~-~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~~~~~~~~~~~~d~~--~~sK~~~~----G~~-~g~~~~~~~~ 268 (411)
.+ .+ +++|.++|+++|+++++|+++. +. .|.. ....+| .|++ +..|+|++ |.| +|++++++++
T Consensus 222 ~~~~d----l~eI~~~a~~~gal~iVD~a~~~~~-~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 222 LFERN----ILEIAEIVHEAGGLLYYDGANLNAI-LGKA-RPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred ccchH----HHHHHHHHHHcCCEEEEEecChhhh-cccC-CccccC--CCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 65 23 9999999999999999999995 21 1211 112233 4654 45698862 223 6777888877
Q ss_pred HHHhcCC------CCcc----------cccCCCCCHHHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHhcC
Q 015230 269 MEMVAPA------GPMY----------QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAG 329 (411)
Q Consensus 269 ~~~~~~~------~~~~----------~~~t~~~~~~~~a~~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~ 329 (411)
...+... .... ..-.++++.+.+.++...+..+..+ +..++..++.++++++|+++ +.
T Consensus 294 ~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~---~~ 370 (481)
T PRK04366 294 APFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI---YD 370 (481)
T ss_pred HhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh---Cc
Confidence 7766310 0000 0011223334445555555554443 44456777888999999886 22
Q ss_pred CceEEeeec-ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC-----Ccceee--ecCCCHHHHHHHH
Q 015230 330 HAICGGYIS-GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFT--SLAHSSDDIQHTI 401 (411)
Q Consensus 330 ~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~-----~~~~~~--~~~~t~~~i~~~i 401 (411)
.... +.. ..+.+...... ..+....++.+.|.++|+.+.... ...+++ ...+|++|||+++
T Consensus 371 ~~~~--~~~~~~~~~~~~~~~---------~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~ 439 (481)
T PRK04366 371 LPYD--RPCMHEFVLSGKKLK---------ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFI 439 (481)
T ss_pred ccCC--CCeeEEEEEECcccc---------ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHH
Confidence 2211 100 11112111000 011234789999999999876322 224555 4577999999999
Q ss_pred HHHHHHHHh
Q 015230 402 TAAEKVLRQ 410 (411)
Q Consensus 402 ~~l~~~~~~ 410 (411)
+.|+++.++
T Consensus 440 ~~l~~i~~~ 448 (481)
T PRK04366 440 AAMKQIAEE 448 (481)
T ss_pred HHHHHHHHH
Confidence 999988764
No 311
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.66 E-value=1.1e-14 Score=135.61 Aligned_cols=237 Identities=14% Similarity=0.058 Sum_probs=148.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.++..+.+++.+++..++.+. ++++||++|+..++.. ...++++||+.++.|++...........
T Consensus 62 gnPt~~~Le~~la~le~~~~~-v~~sSG~aAi~~~l~a--ll~~GD~Vlv~~~~Y~~~~~l~~~~l~~------------ 126 (395)
T PRK05967 62 GTPTTDALCKAIDALEGSAGT-ILVPSGLAAVTVPFLG--FLSPGDHALIVDSVYYPTRHFCDTMLKR------------ 126 (395)
T ss_pred CChHHHHHHHHHHHHhCCCCE-EEECcHHHHHHHHHHH--hcCCCCEEEEccCCcHHHHHHHHHHHHh------------
Confidence 366678888888887755444 5556699999998864 2557788999999888754322111110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
.+..+..++..+.+.++++++ +++++|++|.+.|+.+.+.+ +++|.++|+++|+++|+|++++..
T Consensus 127 ----~Gi~v~~vd~~~~e~l~~al~---~~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p---- 191 (395)
T PRK05967 127 ----LGVEVEYYDPEIGAGIAKLMR---PNTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP---- 191 (395)
T ss_pred ----cCeEEEEeCCCCHHHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc----
Confidence 111233333335677888876 36789999977777777777 999999999999999999999721
Q ss_pred Cccccc--cCCCcchhhhhhhccC-C-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 234 GGAQEY--FGVTPDLTTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 234 ~~~~~~--~~~~~d~~~~sK~~~~-G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
..+.. +|.+.-+.+.+|.++| | ...|+++.+++.++.+... ........+|..+......++-+ .-..++
T Consensus 192 -~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~---~~~~G~~~~p~da~l~~rgl~Tl--~lR~~~ 265 (395)
T PRK05967 192 -LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA---HGTLGLCAGPDDTYQILRGLRTM--GIRLEH 265 (395)
T ss_pred -eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH---HHHcCCCCCHHHHHHHHcCcccH--HHHHHH
Confidence 11222 3444335589999986 3 6678777777766555421 11112345666666555554433 233455
Q ss_pred HHHHHHHHHHHHHHHHH----hcCC-ce---------EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~----~~~~-~~---------~~~~~g~~~~~~~~ 346 (411)
..+++..+.+.|++... .||. .. ...+.|.++.|++.
T Consensus 266 ~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 266 HRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 66666666677665410 1111 00 12356788999985
No 312
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.66 E-value=4.6e-14 Score=133.23 Aligned_cols=312 Identities=16% Similarity=0.090 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh
Q 015230 55 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 134 (411)
Q Consensus 55 ~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~ 134 (411)
++.++++.+.+..+... ......++.+.+++.++ .++.++++||++|+..++... ...+++.|++..++|++.. .
T Consensus 10 ~~~~~~v~~~~~~~~~~--~g~~~~~le~~la~~~g-~~~~v~~~sgt~al~~~l~al-~~~~Gd~Viv~~~~~~~~~-~ 84 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT--QGPTVPAFEEALAEYVG-AKYAVAFNSATSALHIACLAL-GVGPGDRVWTTPITFVATA-N 84 (380)
T ss_pred HHHHHHHHHHHhcCCcc--CChhHHHHHHHHHHHHC-CCeEEEEcCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHH-H
Confidence 45577888888774321 22334566666666664 456677789999999999743 2446788999888887653 3
Q ss_pred hhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-CcEEEEEEcccCCCCCccCCCHHHHHHHHHHH
Q 015230 135 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 213 (411)
Q Consensus 135 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~ 213 (411)
+....|..+..++........ |++++++.+++.+ .++++|++.. ..|...+ +++|.++|
T Consensus 85 ~~~~~G~~~~~~~~~~~~~~~-------------d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~ 144 (380)
T TIGR03588 85 CALYCGAKVDFVDIDPDTGNI-------------DEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALA 144 (380)
T ss_pred HHHHcCCEEEEEecCCCcCCc-------------CHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHH
Confidence 334445544444332111111 8899999987421 2456666432 3566666 99999999
Q ss_pred HHhCCEEEEeccccccccccCccccccCC--Ccchhh--hh--hhccCCcccccccc-cHHHHHHhcCC---CC------
Q 015230 214 KENGALLIFDEVMTGFRLAYGGAQEYFGV--TPDLTT--LG--KIIGGGLPVGAYGG-RRDIMEMVAPA---GP------ 277 (411)
Q Consensus 214 ~~~~~~li~De~~~g~~~g~~~~~~~~~~--~~d~~~--~s--K~~~~G~~~g~~~~-~~~~~~~~~~~---~~------ 277 (411)
++||++||+|++|+- |..+.....+. .-|+++ ++ |.++.| ..|+++. ++++.+.++.. ..
T Consensus 145 ~~~~~~lI~D~a~a~---g~~~~~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 220 (380)
T TIGR03588 145 KKHGLKIIEDASHAL---GAEYGGKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLL 220 (380)
T ss_pred HHcCCEEEEECCCcc---cCccCCEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCccc
Confidence 999999999999971 11111112222 235554 43 888743 3555544 46666554310 00
Q ss_pred ---------c----ccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeec-ceEE
Q 015230 278 ---------M----YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYIS-GMFG 342 (411)
Q Consensus 278 ---------~----~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g-~~~~ 342 (411)
. ..+..+..+.+..+.+...|+.+ ++..++-+++.+++.+.|.++..-.+..... .... .++.
T Consensus 221 ~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYP 298 (380)
T ss_pred ccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEE
Confidence 0 01112344556666666666554 5566777888888888887652100110000 0111 1222
Q ss_pred EEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC-------------------------cceeee--cCCCHH
Q 015230 343 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------------------EAGFTS--LAHSSD 395 (411)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~-------------------------~~~~~~--~~~t~~ 395 (411)
+.+... .....+++.+.|.++||.+..... ..+++| ...|++
T Consensus 299 i~~~~~-----------~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~ 367 (380)
T TIGR03588 299 ILLDQE-----------FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLE 367 (380)
T ss_pred EEECCc-----------CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHH
Confidence 222110 011237889999999998753210 114444 456899
Q ss_pred HHHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKVL 408 (411)
Q Consensus 396 ~i~~~i~~l~~~~ 408 (411)
|++.+++.|++++
T Consensus 368 dv~~i~~~l~~~~ 380 (380)
T TIGR03588 368 QQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998764
No 313
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.66 E-value=1.3e-15 Score=138.33 Aligned_cols=228 Identities=14% Similarity=0.065 Sum_probs=136.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCC
Q 015230 73 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 152 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 152 (411)
.++....++.+.+++.++..+.+++++|+++++..++..+ ..+++.|++..++|.+. ..++...|..+.+++.....
T Consensus 56 ~~~g~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al--~~~gd~Vlv~~~~h~s~-~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 56 DPTGPIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAV--CGPGDKILIDRNCHKSV-INGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred CCChHHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHc--CCCCCEEEEeCCchHHH-HHHHHHCCCEEEEecCccCc
Confidence 4566777888888888864444445999999999888742 44667777777776554 34445555544443322111
Q ss_pred C--CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-
Q 015230 153 G--VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229 (411)
Q Consensus 153 ~--~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~- 229 (411)
. ... .-|++++++.+++++ +++++++... +..|...+ +++|.++|++||+++++||+|...
T Consensus 133 ~~~~~~----------~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 133 YYGIAG----------GIPPETFKKALIEHP-DAKAAVITNP-TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred ccCcCC----------CCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhh
Confidence 1 100 118999999997643 3454444432 34788888 999999999999999999999633
Q ss_pred ccccCcc--ccccCCCcchhhhhhhccCCcccccc-cccHHH--HHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc-
Q 015230 230 RLAYGGA--QEYFGVTPDLTTLGKIIGGGLPVGAY-GGRRDI--MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE- 303 (411)
Q Consensus 230 ~~g~~~~--~~~~~~~~d~~~~sK~~~~G~~~g~~-~~~~~~--~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~- 303 (411)
..+.... ....+.+.-+.|++|+++ |++.|++ ..+.+. .+.+.. ......+.+++.+.+++...+++.+..
T Consensus 197 ~~~~~~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~--~~~~~~ttsps~~~~asl~~a~~~~~~~ 273 (294)
T cd00615 197 RFHPILPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNE--ALNLHQSTSPSYLILASLDVARAMMALE 273 (294)
T ss_pred ccCcccCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHH--HHHHHCCCCcHHHHHHHHHHHHHHHHHH
Confidence 2221111 111233222458899874 5565444 443321 122221 111222445566666666666665533
Q ss_pred -CChHHHHHHHHHHHHHHHH
Q 015230 304 -PGTYEYLNKITGELTQGII 322 (411)
Q Consensus 304 -~~~~~~~~~~~~~~~~~l~ 322 (411)
+++.++..++.++++++|+
T Consensus 274 g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 274 GKELVEELIELALYARQEIN 293 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 5566777777777777664
No 314
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.65 E-value=1.2e-14 Score=136.87 Aligned_cols=262 Identities=13% Similarity=0.034 Sum_probs=159.4
Q ss_pred ccCCCcHHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCC
Q 015230 49 IIGHADDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC 127 (411)
Q Consensus 49 ~~g~~~~~v~~a~~~~l~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~ 127 (411)
.+.+.+.+-.+++.+.+..+..|+ ...+..+++.+.+++..+ ...++.++||+.|+.+++..+ ..+++.||+..+.
T Consensus 33 t~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg-~~~av~~~SG~aAi~~al~al--l~~GD~VI~~~~~ 109 (432)
T PRK06702 33 TYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEG-GVGAVATASGQAAIMLAVLNI--CSSGDHLLCSSTV 109 (432)
T ss_pred ceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHHHh--cCCCCEEEECCCc
Confidence 344444555555555444322222 114556788888888874 456788999999999999743 4567899999888
Q ss_pred cCCCchhhhh-hcCCCCcccCCCCCCCCCCCCCCceeecCCC-CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHH
Q 015230 128 YHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 205 (411)
Q Consensus 128 ~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~ 205 (411)
|.+....... +... +..+..+..+ |+++++++++ +++++|++|...|+.+.+.+
T Consensus 110 Y~~T~~~~~~~l~~~-----------------Gi~v~~vd~~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D---- 165 (432)
T PRK06702 110 YGGTFNLFGVSLRKL-----------------GIDVTFFNPNLTADEIVALAN---DKTKLVYAESLGNPAMNVLN---- 165 (432)
T ss_pred hHHHHHHHHHHHHHC-----------------CCEEEEECCCCCHHHHHHhCC---cCCeEEEEEcCCCccccccC----
Confidence 8865443211 1111 1223333332 8899999887 36788889987777888888
Q ss_pred HHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcc--hhhhhhhccC-Ccccccc-ccc----------HHHHH-
Q 015230 206 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD--LTTLGKIIGG-GLPVGAY-GGR----------RDIME- 270 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d--~~~~sK~~~~-G~~~g~~-~~~----------~~~~~- 270 (411)
+++|.++|++||+++|+|++++ .++....+.+..| +.|+||.++| +.-+|.+ +.. ..+++
T Consensus 166 i~~I~~iA~~~gi~livD~T~~-----tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~ 240 (432)
T PRK06702 166 FKEFSDAAKELEVPFIVDNTLA-----TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEP 240 (432)
T ss_pred HHHHHHHHHHcCCEEEEECCCC-----chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccc
Confidence 9999999999999999999985 2233333333445 5589998875 2223322 211 11110
Q ss_pred --------------------HhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH----
Q 015230 271 --------------------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK---- 326 (411)
Q Consensus 271 --------------------~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 326 (411)
.... ..........+|+.+..+...|+.+ +...++..++...+.+.|++...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~V 316 (432)
T PRK06702 241 DPSYHGVSYVQNFGAAAYIVKARV--QLLRDYGNCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEWV 316 (432)
T ss_pred cccccccchhhccchhhHHHHHHH--HHHHHccCCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 0000 0001123477888888777776543 44456667788888787776521
Q ss_pred hcCCc-e---------EE-eeecceEEEEEe
Q 015230 327 KAGHA-I---------CG-GYISGMFGFFFT 346 (411)
Q Consensus 327 ~~~~~-~---------~~-~~~g~~~~~~~~ 346 (411)
.+|.. . .. .+.|.++.|++.
T Consensus 317 ~yPgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 317 NYPGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred ECCCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 11110 0 11 356788899884
No 315
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.65 E-value=4.1e-14 Score=132.97 Aligned_cols=299 Identities=11% Similarity=0.012 Sum_probs=177.1
Q ss_pred CHHHHHHHHHHHhhCCC--CCEEEEeCChH-HHHHHHHHHHHhcc-CCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-C
Q 015230 75 CLLENVLAEMVISAVPS--IEMVRFVNSGT-EACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P 149 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~--~~~v~~~~~g~-~a~~~al~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~ 149 (411)
..+..++.+++.+.++- ....+++++|| .++.+++..++... +++.||+...+ |.....+....|..++.++. .
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCCeEEEeeeee
Confidence 34456777777777762 24799999999 68888776543222 35677777766 55666667777776665442 1
Q ss_pred CCCCCCCCCCCceeecCCCCHHHHHHHHHcCC-CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc
Q 015230 150 DSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228 (411)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g 228 (411)
+...+.. |+++++++++... ..+.+++.+|....+|...+ +++|.++|++||+++|+|++|+.
T Consensus 183 d~~~~~i------------D~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg~ 246 (444)
T TIGR03531 183 DGDELTT------------DVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYGL 246 (444)
T ss_pred cCcCCCc------------CHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCcC
Confidence 1112211 8999999998533 34555665555333344445 99999999999999999999973
Q ss_pred c--ccccCccccccCC-Ccchh--hhhhhccC-Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH
Q 015230 229 F--RLAYGGAQEYFGV-TPDLT--TLGKIIGG-GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 301 (411)
Q Consensus 229 ~--~~g~~~~~~~~~~-~~d~~--~~sK~~~~-G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~ 301 (411)
. ...... ...... ..|++ +++|.+.. |. .|.+.. ++++++.+... +.+ .. .+..++.+...++..-
T Consensus 247 ~~~~~~~~~-~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~~---y~g-~~-~~s~~~~~~~~ll~~G 319 (444)
T TIGR03531 247 QSNKYMELI-NKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISKS---YPG-RA-SASPSLDVLITLLSLG 319 (444)
T ss_pred cChhhhhhh-hccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHHh---ccC-CC-CChHHHHHHHHHHHhC
Confidence 2 111110 000111 12443 57898874 43 334445 67777777632 222 11 2223444444444432
Q ss_pred hc--CChHHHHHHHHHHHHHHHHHHHHhcCCceE-EeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCe--
Q 015230 302 KE--PGTYEYLNKITGELTQGIIDAGKKAGHAIC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV-- 376 (411)
Q Consensus 302 ~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi-- 376 (411)
.+ ++++++..++.+++.+.|+++..+++.... ++..-.-+.+.+.... +.+...+...|..++|
T Consensus 320 ~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----------~~~~~~~g~~l~~~~v~g 388 (444)
T TIGR03531 320 SKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----------GKDPTMLGSMLYSRRVTG 388 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----------ccCHHHHHHHHHhCCCCC
Confidence 23 778888999999999999998777664322 1111112223222110 1224688888888866
Q ss_pred --EeccCC-----------Ccc---------eee--ecCCCHHHHHHHHHHHHHHH
Q 015230 377 --YFAPSQ-----------FEA---------GFT--SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 377 --~v~~~~-----------~~~---------~~~--~~~~t~~~i~~~i~~l~~~~ 408 (411)
.|.++. ++. +.. ...++++|+|.++++|++++
T Consensus 389 ~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 389 PRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred ceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 233332 000 111 36779999999999998763
No 316
>PRK04311 selenocysteine synthase; Provisional
Probab=99.64 E-value=1.9e-13 Score=129.99 Aligned_cols=316 Identities=16% Similarity=0.126 Sum_probs=180.0
Q ss_pred CcHHHHHHHHHHHHcCCC--CCC----CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeC
Q 015230 53 ADDQVLAALGETMKKGTS--FGA----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 126 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~--~~~----~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~ 126 (411)
.++++.+++.+.+..+.. +.. ..+....+.+.+++.+ +.++++++++|+.|+..++. .+.+++.||+...
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Gae~a~vv~sgtaAl~l~l~---~l~~GdeVIvs~~ 173 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GAEDALVVNNNAAAVLLALN---ALAAGKEVIVSRG 173 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHH---HhCCCCEEEEcch
Confidence 678899999998876431 111 1333456777777766 55578889999999988885 3457788888766
Q ss_pred CcC--CCc-h--hhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC---CCHHHHHHHHHcCCCcEEEEEEcccCCC--C
Q 015230 127 CYH--GHA-D--PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 196 (411)
Q Consensus 127 ~~~--~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~~~~~~~~~~~vi~~~~~~~--~ 196 (411)
.+. +.. . ......|.. +..+.. .++++++++++ +++++++++...|. .
T Consensus 174 e~~~~ggs~~i~~~~~~~G~~-------------------l~~v~~~~~t~~~dle~aI~---~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 174 ELVEIGGAFRIPDVMRQAGAR-------------------LVEVGTTNRTHLRDYEQAIN---ENTALLLKVHTSNYRIE 231 (464)
T ss_pred hhhhcCcchhhHHHHHHCCcE-------------------EEEECCCCCCCHHHHHHhcC---ccCeEEEEEcCCCcccc
Confidence 444 111 1 111122222 222221 26788888886 35677776665442 3
Q ss_pred C--ccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc------cCccccccCCCcchhhhh--hhccCCccccccccc
Q 015230 197 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA------YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 265 (411)
Q Consensus 197 G--~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g------~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~~ 265 (411)
| ...+ +++|.++|++||+++|+|....-+ ..+ .....+......|++++| |+++|. -.|+++++
T Consensus 232 G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~ 306 (464)
T PRK04311 232 GFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGK 306 (464)
T ss_pred ccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEc
Confidence 4 3455 999999999999999999964211 111 111122223456777666 999864 27778899
Q ss_pred HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--C------------ChHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015230 266 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--P------------GTYEYLNKITGELTQGIIDAGKKAGHA 331 (411)
Q Consensus 266 ~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~------------~~~~~~~~~~~~~~~~l~~~~~~~~~~ 331 (411)
+++++.+.... ....+...-...++..+.+..+.+ + ...+++++++..+.+.|++.... +..
T Consensus 307 ~~li~~l~~~~---~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~-~~~ 382 (464)
T PRK04311 307 KELIARLKKHP---LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA-AFA 382 (464)
T ss_pred HHHHHHHhhch---hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC-Cee
Confidence 99988776311 111222233344444444443321 1 11256667777777777664210 110
Q ss_pred eEEe------eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHc--CeEeccCCCcceee-ecCCCHHHHHHHHH
Q 015230 332 ICGG------YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE--GVYFAPSQFEAGFT-SLAHSSDDIQHTIT 402 (411)
Q Consensus 332 ~~~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--Gi~v~~~~~~~~~~-~~~~t~~~i~~~i~ 402 (411)
..+. |.|.+-...+ +.+.....+.......+.+.|++- .|+.+. ....+.+ +.+..++|++.+++
T Consensus 383 ~~~~~~~~~~gggs~p~~~~-----~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~-~~~~~~ld~r~~~~~~~~~~~~ 456 (464)
T PRK04311 383 VEVVPSFSQVGGGSLPVDRL-----PSAAVTLTPKDRSLEALAARLRLLPPPVIGRI-EDGRLLLDLRTLEEEDEERLAA 456 (464)
T ss_pred EEEEEccCccCCCCCcCCCC-----CeEEEEEeCCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHHH
Confidence 1111 1122211111 111111111222347888888874 576653 3345666 56778999999999
Q ss_pred HHHHHHH
Q 015230 403 AAEKVLR 409 (411)
Q Consensus 403 ~l~~~~~ 409 (411)
+|.+++.
T Consensus 457 ~~~~~~~ 463 (464)
T PRK04311 457 ALLEALN 463 (464)
T ss_pred HHHHHhh
Confidence 9998764
No 317
>PRK05939 hypothetical protein; Provisional
Probab=99.64 E-value=2e-14 Score=135.11 Aligned_cols=160 Identities=16% Similarity=0.197 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++..+.. ..+.+++|+.|+..++... ..+++.|++.+..|++.......+..
T Consensus 46 ~p~~~~lE~~la~leg~~-~~v~~ssG~~Ai~~~l~al--l~~Gd~Vv~~~~~y~~t~~~~~~l~~-------------- 108 (397)
T PRK05939 46 TPTTAALEAKITKMEGGV-GTVCFATGMAAIAAVFLTL--LRAGDHLVSSQFLFGNTNSLFGTLRG-------------- 108 (397)
T ss_pred CHHHHHHHHHHHHHhCCC-eEEEeCCHHHHHHHHHHHH--cCCCCEEEECCCccccHHHHHHHHHh--------------
Confidence 455678888888887544 4566667899999888643 45667888887777653321111110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
.+..+..++..|++++++.++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+ .+..
T Consensus 109 ---~G~~v~~v~~~d~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a---~~~~ 175 (397)
T PRK05939 109 ---LGVEVTMVDATDVQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMT---SPWL 175 (397)
T ss_pred ---cCCEEEEECCCCHHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcc---cccc
Confidence 122344445558899998886 46788999988888898877 9999999999999999999996 1111
Q ss_pred ccccccCCCcchhhhhhhccC-Ccccccccc
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG-GLPVGAYGG 264 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~-G~~~g~~~~ 264 (411)
+....+|.+..+.+++|.++| |.++|+++.
T Consensus 176 ~~~~~~gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 176 FRPKDVGASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred cCccccCCEEEEecCeecccCCCCeEEEEEe
Confidence 111112333335589999996 788888755
No 318
>PLN02263 serine decarboxylase
Probab=99.64 E-value=2.9e-13 Score=127.11 Aligned_cols=291 Identities=13% Similarity=0.022 Sum_probs=184.6
Q ss_pred CCHHHHHHHHHHHhhCC-CCC--EEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC
Q 015230 74 PCLLENVLAEMVISAVP-SIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 150 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~-~~~--~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (411)
..+.+.++.+|+++.++ +.+ .-++|+||||++..||..+|....+ .+++.+..-|....-++...|-+++.++...
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 35678899999999997 332 4689999999999999998876443 3666677777777777777777776665532
Q ss_pred CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCC-----EEEEecc
Q 015230 151 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA-----LLIFDEV 225 (411)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~-----~li~De~ 225 (411)
.... |+++|++.+.+...++.+|+.+-...+.|.+-| +++|.++|++||+ ++++|.+
T Consensus 210 ~g~m--------------D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA 271 (470)
T PLN02263 210 SGEI--------------DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGA 271 (470)
T ss_pred CCcC--------------cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEecc
Confidence 2222 899999999875445777777777777899988 9999999999997 9999999
Q ss_pred cccc-ccc--cCccccccCCCcchh--hhhhhccCCcccccccccHHHHHHhcCCCCcccc--cCCCCC--HHHHHHHHH
Q 015230 226 MTGF-RLA--YGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQA--GTLSGN--PLAMTAGIH 296 (411)
Q Consensus 226 ~~g~-~~g--~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~--~t~~~~--~~~~a~~~~ 296 (411)
+.|+ .+- ..-.++ +....|-+ ..-|+++..++.|.+..++..++.+.....++.. .+..++ .........
T Consensus 272 ~GG~~lPf~~~~~~~d-f~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 272 LFGLMMPFVKRAPKVT-FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred chhhHhhhcccccccC-CCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 9887 311 100011 01113333 3459888777788887776655444321111100 011111 112233344
Q ss_pred HHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHH
Q 015230 297 TLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 373 (411)
Q Consensus 297 ~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 373 (411)
.++.+.. .+..++..++++++.++|++. ++..-..+..+.+.|..+ .. . ...
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~V~f~~p-------------~~----~----~~~ 405 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSSTVVFERP-------------KD----E----EFV 405 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceEEEEecC-------------ch----H----Hhh
Confidence 4444433 455566677777777877765 433333344455554321 11 1 123
Q ss_pred cCeEeccCCCc-ceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 374 EGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 374 ~Gi~v~~~~~~-~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
+|-.+...+.. ++.+...++.+.+|++++-|++..+
T Consensus 406 ~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 406 RRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred cceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 56666554321 2444566789999999999987654
No 319
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.64 E-value=4e-14 Score=133.09 Aligned_cols=309 Identities=12% Similarity=-0.020 Sum_probs=176.0
Q ss_pred CcHH-HHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHhhCC--CCCEEEEeC-ChHHHHHHHHHHHHhccCCcEEEEEeCC
Q 015230 53 ADDQ-VLAALGETMKKGTSFG-APCLLENVLAEMVISAVP--SIEMVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGC 127 (411)
Q Consensus 53 ~~~~-v~~a~~~~l~~~~~~~-~~~~~~~~l~~~l~~~~~--~~~~v~~~~-~g~~a~~~al~~~~~~~~~~~vi~~~~~ 127 (411)
.+|+ +++++.+......+.. -..+..++..+.+++.++ ..++|+|+. |||++++.++... ..+++.+++..+
T Consensus 23 ~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l--~~~~~~~vi~~g- 99 (378)
T PRK03080 23 KRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL--LGARRVDHLAWE- 99 (378)
T ss_pred CChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc--CCCCcceEEEeC-
Confidence 4566 8888875533211111 124556777777888886 245788885 9999999999753 222333444444
Q ss_pred cCCCchhh-h-hhcCC-CCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHH
Q 015230 128 YHGHADPF-L-VKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 204 (411)
Q Consensus 128 ~~~~~~~~-~-~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~ 204 (411)
.|+..... + ...|. ++..+..++.... |++++ +. ++.|.+..+.+.+|.+.|
T Consensus 100 ~f~~~~~~~~~~~~g~~~v~~~~~~~g~~~--------------d~~~i----~~----~~~V~~~h~~t~tG~~~p--- 154 (378)
T PRK03080 100 SFGSKWATDVVKQLKLEDPRVLEADYGSLP--------------DLSAV----DF----DRDVVFTWNGTTTGVRVP--- 154 (378)
T ss_pred HHHHHHHHHHHhhcCCCCceEeccCCCCCC--------------CHhhc----CC----CCCEEEEecCCccceecc---
Confidence 44432221 1 11233 3333322211111 44442 21 335777788888999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchh--hhhhhccCCcccccccccHHHHHHhcCCCC----
Q 015230 205 FLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP---- 277 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~---- 277 (411)
+++|.+ ++||+++++|.+|+ .| ....++ . .|++ +..|++++..-+|+++.+++.++.+.+...
T Consensus 155 -i~~I~~--~~~g~~~vVDa~qs---~G~~pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~ 224 (378)
T PRK03080 155 -VARWIG--ADREGLTICDATSA---AFALPLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPI 224 (378)
T ss_pred -chhhcc--ccCCCeEEEecccc---cccCCCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCC
Confidence 999988 88999999999997 22 112222 2 2544 667999752228888999988877654210
Q ss_pred ---------------cccccC-CCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee-
Q 015230 278 ---------------MYQAGT-LSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY- 336 (411)
Q Consensus 278 ---------------~~~~~t-~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 336 (411)
.+...+ .+++..+..+..++++.+.+ ++..++.+++.+++++.|+++............
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 304 (378)
T PRK03080 225 PKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATR 304 (378)
T ss_pred chhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccc
Confidence 011112 23444555555677776654 334455666666666666654210001001111
Q ss_pred ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----Ccceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 337 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+.++.|.+.+. ..... ..+...+.++|+++..++ .+.+|+ ....|++|++++++.|++++++
T Consensus 305 s~~i~~~~~~~~----------~~~~~-~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 305 SNTSVTLDFVDA----------QAAVD-AAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred CccEEEEEcCCc----------hHHHH-HHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 224555554220 00122 235566667788887653 245777 4678999999999999998775
No 320
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=3.8e-14 Score=133.39 Aligned_cols=237 Identities=11% Similarity=0.042 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++..+..+ .+.+++|+.|+..++. ...+++.|++..+.|++.+........
T Consensus 53 ~p~~~~le~~lA~l~g~~~-~v~~~sG~~ai~~~l~---~l~~Gd~Vlv~~~~y~~~~~~~~~~~~-------------- 114 (390)
T PRK08064 53 NPTREALEDIIAELEGGTK-GFAFASGMAAISTAFL---LLSKGDHVLISEDVYGGTYRMITEVLS-------------- 114 (390)
T ss_pred ChhHHHHHHHHHHHhCCCC-eEEECCHHHHHHHHHH---HhCCCCEEEEccCccchHHHHHHHHHH--------------
Confidence 4556788888888886444 5566788999988775 345678899999988865543221110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
..+..+..++..|++++++.++ +++++|+++..+|++|.+.+ +++|.++|+++|+++|+|++|+.+.....
T Consensus 115 --~~G~~v~~v~~~d~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~~~ 185 (390)
T PRK08064 115 --RFGIEHTFVDMTNLEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPLLQKP 185 (390)
T ss_pred --HcCCEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcccccCc
Confidence 0112334444457888888776 35788888888888898888 99999999999999999999973211111
Q ss_pred ccccccCCCcchhhhhhhccC--Ccccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHH
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 311 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~--G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~ 311 (411)
. .++.+.-+.+++|.++| |...|++++ ++++++.+.... .......++..+......++.+ ....++..
T Consensus 186 --~-~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~---~~~g~~~~~~~a~l~~~gl~tl--~~R~~~~~ 257 (390)
T PRK08064 186 --L-DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQ---NSFGAVLGVQDCWLVLRGLKTL--HVRLEHSS 257 (390)
T ss_pred --h-hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHH---HhcCCCCCHHHHHHHHcccCcH--HHHHHHHH
Confidence 1 12333334578999974 344566655 567777765311 1112233344444333222211 33445556
Q ss_pred HHHHHHHHHHHHHHH----hcCC----------ceEEeeecceEEEEEe
Q 015230 312 KITGELTQGIIDAGK----KAGH----------AICGGYISGMFGFFFT 346 (411)
Q Consensus 312 ~~~~~~~~~l~~~~~----~~~~----------~~~~~~~g~~~~~~~~ 346 (411)
++...+.+.|++... .+|. .....+.|.++.|++.
T Consensus 258 ~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 258 ETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred HHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 666666666665420 0010 0123456788899883
No 321
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=4.5e-14 Score=132.21 Aligned_cols=216 Identities=17% Similarity=0.102 Sum_probs=134.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 153 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (411)
.+.....+.+.+++..+. +..+++++|+.++..++. ...++++|++.++.|.+.+........
T Consensus 48 ~~p~~~~Le~~lA~l~g~-~~~~~~~sG~aai~~~~~---~l~~Gd~Viv~~~~y~~~~~~~~~~~~------------- 110 (377)
T PRK07671 48 GNPTRAALEELIAVLEGG-HAGFAFGSGMAAITAVMM---LFSSGDHVILTDDVYGGTYRVMTKVLN------------- 110 (377)
T ss_pred CChHHHHHHHHHHHHhCC-CceEEeCCHHHHHHHHHH---HhCCCCEEEECCCccchHHHHHHHHHh-------------
Confidence 456678888888888854 445667788888876654 345678899999888765433221110
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
..+.++..++..|+++++++++ +++++|+++..+|++|...+ +++|.++|+++|+++|+|++|+....+.
T Consensus 111 ---~~G~~v~~v~~~d~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~~~~~ 180 (377)
T PRK07671 111 ---RFGIEHTFVDTSNLEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTPYWQS 180 (377)
T ss_pred ---cCCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 0112333444458899988886 35678888777777788877 9999999999999999999996321111
Q ss_pred CccccccCCCcchhhhhhhccC-C-cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHH
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 310 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~ 310 (411)
.. .++.+.-+.|++|+++| + .-.|++++ ++++++.+.... .......++..+..+...++.+ ....++.
T Consensus 181 p~---~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~---~~~g~~~~~~~a~l~~~~l~tl--~~R~~~~ 252 (377)
T PRK07671 181 PI---SLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ---NSTGGILGPQDSWLLLRGLKTL--GIRMEEH 252 (377)
T ss_pred hh---hhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH---HhhcCCCCHHHHHHHHcCcChH--HHHHHHH
Confidence 11 12222234589999985 2 23455554 566766665211 1112334556555555444433 2345566
Q ss_pred HHHHHHHHHHHHHH
Q 015230 311 NKITGELTQGIIDA 324 (411)
Q Consensus 311 ~~~~~~~~~~l~~~ 324 (411)
.++...+.+.|++.
T Consensus 253 ~~na~~la~~L~~~ 266 (377)
T PRK07671 253 ETNSRAIAEFLNNH 266 (377)
T ss_pred HHHHHHHHHHHHcC
Confidence 67777777777654
No 322
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.62 E-value=5.3e-14 Score=131.73 Aligned_cols=169 Identities=16% Similarity=0.130 Sum_probs=111.2
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
......|.+.+++..+ .+..++++||+.|+.+++. .+.++++|++.++.|++...........
T Consensus 49 ~p~~~~Le~~la~l~g-~~~al~~~SG~~Al~~~l~---~l~pGd~Vi~~~~~y~~t~~~~~~~~~~------------- 111 (380)
T PRK06176 49 NPTRFALEELIADLEG-GVKGFAFASGLAGIHAVFS---LFQSGDHVLLGDDVYGGTFRLFDKVLVK------------- 111 (380)
T ss_pred ChhHHHHHHHHHHHhC-CCCEEEECCHHHHHHHHHH---HcCCCCEEEEcCCChhHHHHHHHHHHHh-------------
Confidence 4556788888888875 4455777889999987664 3456788999888887654222111100
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
.+.++..++..|++++++.++ +++++|++|..+|++|.+.+ +++|.++|++||+++|+|++|+....+..
T Consensus 112 ---~gi~v~~vd~~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~~~~~p 181 (380)
T PRK06176 112 ---NGLSCTIIDTSDLSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATPYYQNP 181 (380)
T ss_pred ---cCeEEEEcCCCCHHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCccccccCCc
Confidence 112233344448899988876 36788888887888888888 99999999999999999999973211111
Q ss_pred ccccccCCCcchhhhhhhccC-C-cccccccc-cHHHHHHhc
Q 015230 235 GAQEYFGVTPDLTTLGKIIGG-G-LPVGAYGG-RRDIMEMVA 273 (411)
Q Consensus 235 ~~~~~~~~~~d~~~~sK~~~~-G-~~~g~~~~-~~~~~~~~~ 273 (411)
. .++.+.-+.|++|.++| | .-.|+++. ++++.+.+.
T Consensus 182 ~---~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 182 L---LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred c---ccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 1 12333334478899985 4 33555665 455555554
No 323
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.62 E-value=4.1e-13 Score=115.88 Aligned_cols=331 Identities=16% Similarity=0.088 Sum_probs=208.6
Q ss_pred ecCCCEEEeccCCccccccCCCcHHHHHHHHHH-HHc---CC----C--CCCCCHHHHHHHHHHHhhCC-CCCEEEEeCC
Q 015230 32 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGET-MKK---GT----S--FGAPCLLENVLAEMVISAVP-SIEMVRFVNS 100 (411)
Q Consensus 32 ~~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~-l~~---~~----~--~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~ 100 (411)
+.+|-.|+| + |++|..++.+.+...+. .+. .. . -..+-..-+.+..+++.+.+ ...++..++|
T Consensus 28 lp~~viyLd---g---nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dt 101 (407)
T COG3844 28 LPGGVIYLD---G---NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDT 101 (407)
T ss_pred CCCCeEEee---c---cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCC
Confidence 355566666 3 56776553443333332 222 10 0 11234555778888888888 7889999998
Q ss_pred hHHHHHHHHHHHHhccCCcEEEEEeCC-cCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc
Q 015230 101 GTEACMGVLRLARAFTGRERIIKFEGC-YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179 (411)
Q Consensus 101 g~~a~~~al~~~~~~~~~~~vi~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 179 (411)
.+--+...|..+.....++.||+++.. |+.....+.-... +..+ +.++... .++.++++.+.
T Consensus 102 ts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~--~~~~------------~~~~~~~--~~P~~~~~~~~- 164 (407)
T COG3844 102 TSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLAD--LLGI------------GYDLEGV--IAPRALEEAIT- 164 (407)
T ss_pred cchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhh--hhcc------------cccceee--eChHHHHHhhc-
Confidence 887777777766565656777777664 4432222110000 0000 0011111 14667777776
Q ss_pred CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc-CccccccCCCcchhhhhhhccCC-c
Q 015230 180 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGG-L 257 (411)
Q Consensus 180 ~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~-~~~~~~~~~~~d~~~~sK~~~~G-~ 257 (411)
++++.|+++.++.-+|.+.+ +.+|-+++++||++++.|-+|+ .|. ..-...+|.+--+.|.-|.++|| -
T Consensus 165 --dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs---aGavp~~Lh~~gaDfaigcsyKYLNgGPG 235 (407)
T COG3844 165 --DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS---AGAVPVDLHAAGADFAIGCSYKYLNGGPG 235 (407)
T ss_pred --cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc---cCCcceeecccCCCeeeeeeceeccCCCC
Confidence 68999999999999999999 9999999999999999999997 231 11222234444577888999865 2
Q ss_pred ccccccccHHHHHHhcCCCCcccc--------------------cCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHH
Q 015230 258 PVGAYGGRRDIMEMVAPAGPMYQA--------------------GTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKIT 314 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~--------------------~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~ 314 (411)
-.+++.+.++..+...+....+.+ -.-+.+.+++++...+|++..+ .+++++...+.
T Consensus 236 apa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLT 315 (407)
T COG3844 236 APAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALT 315 (407)
T ss_pred CceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHH
Confidence 244554444333332221111111 0114456777777778887766 56677777777
Q ss_pred HHHHHHHHHHHHhcCCce----EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--
Q 015230 315 GELTQGIIDAGKKAGHAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT-- 388 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~-- 388 (411)
.++.+.++.....+++-. .-..+|..+.+... .+.++.+.|.++||+...-..+.+|+
T Consensus 316 d~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp----------------~~~~V~qaLi~rGVigD~R~P~vlRfgf 379 (407)
T COG3844 316 DYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP----------------HGYQVMQALIDRGVIGDFREPDVLRFGF 379 (407)
T ss_pred HHHHHHHHhccccCCcEEeccchhhhccceeeEecC----------------cHHHHHHHHHHcCccccccCCCeeeecC
Confidence 777777776644443211 11235666666553 24789999999999988777667777
Q ss_pred -ecCCCHHHHHHHHHHHHHHHHh
Q 015230 389 -SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 389 -~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
|++.+..|+=.+++.|.++++.
T Consensus 380 tPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 380 TPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred ccceechhHHHHHHHHHHHHHHh
Confidence 7899999999999999999875
No 324
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=4.2e-14 Score=131.58 Aligned_cols=236 Identities=11% Similarity=0.008 Sum_probs=153.9
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
+.-...|.+.++++. +.+..++++||+.|+.+++... ..+++.|++....|.+..........
T Consensus 61 nPt~~~le~~la~LE-g~~~a~~~~SGmaAi~~~~~~l--l~~GD~Vv~~~~~Yg~t~~l~~~~l~-------------- 123 (395)
T PRK08114 61 TLTHFSLQEAMCELE-GGAGCALYPCGAAAVANAILAF--VEQGDHVLMTGTAYEPTQDFCSKILS-------------- 123 (395)
T ss_pred ChhHHHHHHHHHHHh-CCCeEEEEhHHHHHHHHHHHHH--cCCCCEEEEeCCCcHHHHHHHHHHHH--------------
Confidence 455677888888776 5667888888999999988643 45677888877777664433211110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhC--CEEEEeccccccccc
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG--ALLIFDEVMTGFRLA 232 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~--~~li~De~~~g~~~g 232 (411)
..+.++..++..|.+++++.++ +++++|++|.+.|+.|.+.+ +++|.++|++++ +++++|.+++ .+
T Consensus 124 --~~Gi~v~~vd~~d~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a---~p 191 (395)
T PRK08114 124 --KLGVTTTWFDPLIGADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA---AG 191 (395)
T ss_pred --hcCcEEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc---cc
Confidence 0122445555568899998886 36899999999999999999 999999999985 9999999997 33
Q ss_pred cCccccccCCCcch--hhhhhhccC-C-cccccccccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHH
Q 015230 233 YGGAQEYFGVTPDL--TTLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308 (411)
Q Consensus 233 ~~~~~~~~~~~~d~--~~~sK~~~~-G-~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~ 308 (411)
.. ++...+..|+ .+.+|+++| | .-.|.++.+++.++.+.... .......+|..+......++-+ .-..+
T Consensus 192 ~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~---~~~G~~~~p~~a~l~~rgl~TL--~lR~~ 264 (395)
T PRK08114 192 VL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENS---YLMGQMVDADTAYMTSRGLRTL--GVRLR 264 (395)
T ss_pred cc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHH---HhccCCCCHHHHHHHHcCCCcH--HHHHH
Confidence 22 3333334454 478899997 4 55776677776665554211 1112245666666555544322 33446
Q ss_pred HHHHHHHHHHHHHHHHHH----hcCC-c---------eEEeeecceEEEEEe
Q 015230 309 YLNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 346 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~----~~~~-~---------~~~~~~g~~~~~~~~ 346 (411)
+..+++..+.+.|++... .||. . ....+.|.++.|++.
T Consensus 265 ~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 265 QHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred HHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 677777777777776521 1111 0 112356889999985
No 325
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.61 E-value=5.1e-14 Score=130.78 Aligned_cols=233 Identities=17% Similarity=0.139 Sum_probs=146.0
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
+.-...+.+.++++. +.+.++.++||..|+.+++... ...+++|++....|++.........
T Consensus 54 nPt~~~le~~la~Le-~g~~a~~~~SGmaAi~~~l~~l--l~~Gd~iv~~~~~Y~~t~~~~~~~l--------------- 115 (386)
T PF01053_consen 54 NPTVRALEQRLAALE-GGEDALLFSSGMAAISAALLAL--LKPGDHIVASDDLYGGTYRLLEELL--------------- 115 (386)
T ss_dssp -HHHHHHHHHHHHHH-T-SEEEEESSHHHHHHHHHHHH--S-TTBEEEEESSSSHHHHHHHHHCH---------------
T ss_pred cccHHHHHHHHHHhh-cccceeeccchHHHHHHHHHhh--cccCCceEecCCccCcchhhhhhhh---------------
Confidence 555678888887776 5578888999999999888643 4457889998888887443322111
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhC-CEEEEecccccccccc
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~-~~li~De~~~g~~~g~ 233 (411)
...+..+..++..|+++++++++ +++++|++|+..|+...+.+ +++|+++|+++| +++++|.+.+.
T Consensus 116 -~~~gv~v~~~d~~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~at----- 182 (386)
T PF01053_consen 116 -PRFGVEVTFVDPTDLEALEAALR---PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFAT----- 182 (386)
T ss_dssp -HHTTSEEEEESTTSHHHHHHHHC---TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTH-----
T ss_pred -cccCcEEEEeCchhHHHHHhhcc---ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccc-----
Confidence 11223455566668999999998 47999999999888888888 999999999998 99999999961
Q ss_pred CccccccCCCcc--hhhhhhhccC-C-ccccccccc--HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChH
Q 015230 234 GGAQEYFGVTPD--LTTLGKIIGG-G-LPVGAYGGR--RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 307 (411)
Q Consensus 234 ~~~~~~~~~~~d--~~~~sK~~~~-G-~~~g~~~~~--~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~ 307 (411)
+..++.+....| +.|.+|.++| | .-.|.++.+ +++.+.+.... ... ....+|..+......++-+ .-..
T Consensus 183 p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-~~~--G~~~~p~da~ll~rgl~Tl--~~R~ 257 (386)
T PF01053_consen 183 PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-RLL--GATLSPFDAWLLLRGLRTL--PLRM 257 (386)
T ss_dssp TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-HHH--T-B--HHHHHHHHHHHTTH--HHHH
T ss_pred eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-hhc--CccchHHHHHHHhcCCCcH--HHHH
Confidence 222333333345 4589999986 4 446666654 46666554211 111 2233445444444444322 3344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceE------------------EeeecceEEEEEec
Q 015230 308 EYLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTE 347 (411)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~~~~~~~~------------------~~~~g~~~~~~~~~ 347 (411)
++..+++..+.+.|++. |.+.. ..+.|.++.|++.+
T Consensus 258 ~~~~~nA~~lA~~L~~h----p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 258 ERQNENAEALAEFLEEH----PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp HHHHHHHHHHHHHHHTS----TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred HHHHHHHHHHHHHHHhC----CCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 66667777777777664 33322 22556799999953
No 326
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.61 E-value=1.9e-13 Score=129.69 Aligned_cols=157 Identities=18% Similarity=0.165 Sum_probs=110.3
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++..+ .+..++++||++|+..++... ..++++||+....|++.........
T Consensus 63 ~p~~~~le~~lA~l~g-~~~av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~~l--------------- 124 (433)
T PRK08134 63 NPTVAVLEERVAALEG-GVGAIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHYTL--------------- 124 (433)
T ss_pred ChHHHHHHHHHHHHhC-CCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHHHH---------------
Confidence 4556888888888875 345799999999999998753 4467788888888876433221110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
...+..+..++.+|++++++.++ +++++|+++...+++|.+.+ +++|.++|++||+++|+|.+|+ .+..
T Consensus 125 -~~~Gi~v~~vd~~d~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a---~~~~ 193 (433)
T PRK08134 125 -RRFGIETTFVKPGDIDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFT---TPYL 193 (433)
T ss_pred -hhCCeEEEEECCCCHHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCc---cccc
Confidence 01122445555558999999887 46788999988888999999 9999999999999999999996 2211
Q ss_pred ccccccCCCcch--hhhhhhccC-Ccccccc
Q 015230 235 GAQEYFGVTPDL--TTLGKIIGG-GLPVGAY 262 (411)
Q Consensus 235 ~~~~~~~~~~d~--~~~sK~~~~-G~~~g~~ 262 (411)
........|+ .|.+|.++| |-.+|++
T Consensus 194 --~~pl~~GaD~vv~S~tK~l~g~g~~~gG~ 222 (433)
T PRK08134 194 --LRPFEHGADLVYHSATKFLGGHGTAIGGV 222 (433)
T ss_pred --CCchhcCCCEEEeccccccCCCCCceEEE
Confidence 1111233454 477899986 5445554
No 327
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.60 E-value=1.5e-13 Score=127.88 Aligned_cols=306 Identities=12% Similarity=0.015 Sum_probs=186.4
Q ss_pred CcHHHHHHHHHHHHcC------C--CCCCCC---HHHHHHHHHHHhhCCC--CCEE-EEeCChHHHHHHHHHHHHhccCC
Q 015230 53 ADDQVLAALGETMKKG------T--SFGAPC---LLENVLAEMVISAVPS--IEMV-RFVNSGTEACMGVLRLARAFTGR 118 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~------~--~~~~~~---~~~~~l~~~l~~~~~~--~~~v-~~~~~g~~a~~~al~~~~~~~~~ 118 (411)
.+++|++|+...+.+. . ...... +..+++.+.+.+.++. ..++ ++++||+.++++++... ..++
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl--~~~g 91 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNL--LGGG 91 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhc--CCCC
Confidence 7889999999887542 0 011123 6678888888888862 2345 45578999999998742 2345
Q ss_pred cEEEEEeCCcCCCchhhhhh-cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHH-HHHcCCCcEEEEEEcccCCCC
Q 015230 119 ERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENNKGEIAAIILEPVVGNS 196 (411)
Q Consensus 119 ~~vi~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-~~~~~~~~~~~vi~~~~~~~~ 196 (411)
+++++...+..+....-... .|. ...+..+...+.. +..++++ .++ .++++|.+..+.+++
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~g~~-------------~~~~~~~~~l~---~~~~~V~~th~eTst 154 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGE-VNVAASSEDDGFT-------------YIPPLDEWQLS---DDAAYVHYTSNETID 154 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-ceEEecccccCCC-------------CCCChhhccCC---CCCCEEEEccCCCcc
Confidence 67777777766654433222 233 2222222112211 2222333 444 256788888888889
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchhhhhhhccCCcc-cccccccHHHHHHhcC
Q 015230 197 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLGKIIGGGLP-VGAYGGRRDIMEMVAP 274 (411)
Q Consensus 197 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~~~sK~~~~G~~-~g~~~~~~~~~~~~~~ 274 (411)
|+..++ +.+| ||+++++|.+++ .| ....++.++ .-+.+..|+++. + +|.++.++++++.+.+
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss---~g~~~idv~~~d--~~~~ssqK~lgP--~Glg~l~~s~~~l~~~~~ 218 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSD---ILSRPIDVSKFG--LIYAGAQKNIGP--AGLTIVIVREDLLGRALP 218 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCcc---ccCccCCHHHcc--EEEEeccccccC--CceEEEEECHHHHhhccc
Confidence 998731 6665 899999999997 22 222233332 223356699862 3 8888999999888764
Q ss_pred CCCc---------ccccCCCCCHHHHHHHHHHHHHHhcC----ChHHHHHHHHHHHHHHHHHHHHhcCCce---EE-eee
Q 015230 275 AGPM---------YQAGTLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAI---CG-GYI 337 (411)
Q Consensus 275 ~~~~---------~~~~t~~~~~~~~a~~~~~l~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~-~~~ 337 (411)
.... ......+++.....+..++++.+.++ ++.++.+++.+++++.|+++ ++.. .. ...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~----~~~~~~~~~~~rs 294 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS----DFYRNPVAPEDRS 294 (360)
T ss_pred CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC----CCcccCCChhhcC
Confidence 2110 01113456667777777888877653 44555666666666666665 3211 10 112
Q ss_pred cceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceeee--cCCCHHHHHHHHHHHHHHHHh
Q 015230 338 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 338 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~~--~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+..+.|.+. ......++.+.+.++|+.+.++. ...+|++ ...|.+|++++++.|++++..
T Consensus 295 ~~v~sf~~~-------------~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~ 358 (360)
T PRK05355 295 RMNVPFTLA-------------DEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFERR 358 (360)
T ss_pred CcEEEEEcC-------------ChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 244555542 22233567778889999986653 2457875 566899999999999998753
No 328
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=1.8e-13 Score=129.59 Aligned_cols=159 Identities=15% Similarity=0.141 Sum_probs=105.9
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+.+.+.+++.. +.+..++++||+.|+..++... ..+++.||+....|.+...........
T Consensus 68 ~p~~~~Le~~lA~l~-g~~~av~~sSG~aAi~~al~al--l~~Gd~Vv~~~~~y~~t~~~~~~~l~~------------- 131 (436)
T PRK07812 68 NPTQDVVEQRIAALE-GGVAALLLASGQAAETFAILNL--AGAGDHIVSSPRLYGGTYNLFHYTLPK------------- 131 (436)
T ss_pred CchHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEeCCcchHHHHHHHHHhhc-------------
Confidence 455678888888887 4556788889999999988643 356778888877775533221111000
Q ss_pred CCCCCCceeecC-CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 155 PKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~-~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
.+..+..++ ..|+++++++++ +++++|+++.+.|+.|.+.+ +++|.++|++||+++|+|++++ .+.
T Consensus 132 ---~Gi~v~~vdd~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a---~~~ 198 (436)
T PRK07812 132 ---LGIEVSFVEDPDDLDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIA---TPY 198 (436)
T ss_pred ---CeEEEEEECCCCCHHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc---ccc
Confidence 111223332 237888888776 46789999999999999999 9999999999999999999996 111
Q ss_pred CccccccCCCcchhhhhhhccC-Ccccccc
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLPVGAY 262 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~~g~~ 262 (411)
....-.+|.+.-+.|++|.++| |--+|++
T Consensus 199 ~~~pl~~GaDivv~S~tK~lgg~G~~i~G~ 228 (436)
T PRK07812 199 LIRPLEHGADIVVHSATKYLGGHGTAIAGV 228 (436)
T ss_pred cCCchhcCCCEEEEecccccCCCCCeEEEE
Confidence 1100012333334589999985 4334444
No 329
>PLN02880 tyrosine decarboxylase
Probab=99.60 E-value=2.9e-13 Score=130.33 Aligned_cols=312 Identities=12% Similarity=0.048 Sum_probs=182.9
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------EEEEeCChHHHHHHHHHHHHhcc-------C-CcEEEEEeCCcCCCchhhhh
Q 015230 74 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 137 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~--------~v~~~~~g~~a~~~al~~~~~~~-------~-~~~vi~~~~~~~~~~~~~~~ 137 (411)
..+.+.++.+|+++.++-++ .-++|+|||+|+..+|.++|... + +..++..+...|....-++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 46888999999999997333 36899999999999998887431 1 23345455555777777777
Q ss_pred hcCCC---CcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHH
Q 015230 138 KAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 211 (411)
Q Consensus 138 ~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~ 211 (411)
..|-+ ++.++......... |+++|++++++. ...+.+|+.+-...++|.+-| +++|.+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~~~m------------d~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~ 263 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTNYAL------------APELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGK 263 (490)
T ss_pred HcCCCHHHEEEeecCCCcCCcC------------CHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHH
Confidence 77654 44444432111111 899999999752 234677888877788899999 999999
Q ss_pred HHHHhCCEEEEecccccc-ccccCccccccCC-Ccchh--hhhhhccCCcccccccccH--HHHHHhcCCCCcccc----
Q 015230 212 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGRR--DIMEMVAPAGPMYQA---- 281 (411)
Q Consensus 212 l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~-~~d~~--~~sK~~~~G~~~g~~~~~~--~~~~~~~~~~~~~~~---- 281 (411)
+|++||+++++|.+|+|+ ...+.+-....++ ..|.+ ..-|++...+..|.+..+. .+...+.....++..
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~ 343 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ 343 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCcccc
Confidence 999999999999999865 3221111112233 34544 4679998766688876643 223333211111000
Q ss_pred -------cCCC---CCHHHHHHHHHHHHHHhcCChHHHHH---HHHHHHHHHHHHHHHhcCCce-EEeeecceEEEEEec
Q 015230 282 -------GTLS---GNPLAMTAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTE 347 (411)
Q Consensus 282 -------~t~~---~~~~~~a~~~~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~ 347 (411)
..++ +-.+........++.+..+.++++++ ++.+++.+.|++. +... .......++.|.+..
T Consensus 344 ~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~----~~~el~~~~~~~iv~Fr~~~ 419 (490)
T PLN02880 344 ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQD----SRFEVVTPRIFSLVCFRLVP 419 (490)
T ss_pred ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcC----CCEEEecCCceEEEEEEEeC
Confidence 0000 01111122223344444355555555 7777777766554 2221 112234466666643
Q ss_pred CCCCCcchhcccchHHHHHHHHHHHHcC-eEeccC---CCcceee---ecCCCHHHHHHHHHHHHHHHHh
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~G-i~v~~~---~~~~~~~---~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..... ........++.+.|.+.| +++.+. +...+|+ +..+|+++++.+++.|.++..+
T Consensus 420 ~~~~~-----~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 420 PKNNE-----DNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCCh-----hhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 11100 001122345666666664 444433 2223565 4677889999999999887654
No 330
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.59 E-value=5.6e-13 Score=134.11 Aligned_cols=300 Identities=16% Similarity=0.143 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhcc-----CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCC
Q 015230 76 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 150 (411)
Q Consensus 76 ~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~-----~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 150 (411)
+...++.+|+++..+-...-++.++|+.|..+++..+|.+. .+..+++.+.+-|++....+...|..+..++..
T Consensus 530 q~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d- 608 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCD- 608 (939)
T ss_pred HHHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccC-
Confidence 56788999999999623455677788888777776665531 234566777788887777766667666655443
Q ss_pred CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc-c
Q 015230 151 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-F 229 (411)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g-~ 229 (411)
..+.. |+++|++.++++.+++++|++...++ .|.+.++ +++|.++|+++|..+++|.++.. .
T Consensus 609 ~~G~i-------------Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al 671 (939)
T TIGR00461 609 QDGNI-------------DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPT---IQHACDIVHSFGGQVYLDGANMNAQ 671 (939)
T ss_pred CCCCc-------------CHHHHHHHHhhcCCceEEEEEEeCCc-Cceeccc---HHHHHHHHHHcCCEEEEEecChhhC
Confidence 22322 89999999987556788888876665 4555432 99999999999999999999951 2
Q ss_pred ccccCccccccCCCcchhhh--hhhcc----CCcc-cccccccHHHHHHhcCCCCc--------------ccccCCCCCH
Q 015230 230 RLAYGGAQEYFGVTPDLTTL--GKIIG----GGLP-VGAYGGRRDIMEMVAPAGPM--------------YQAGTLSGNP 288 (411)
Q Consensus 230 ~~g~~~~~~~~~~~~d~~~~--sK~~~----~G~~-~g~~~~~~~~~~~~~~~~~~--------------~~~~t~~~~~ 288 (411)
......-....|++++ .|+|+ +|-| +|.+.+++++...+.. ... ...+.+..+.
T Consensus 672 ----~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg-~~v~~t~d~~greq~Iga~s~~~~g~a 746 (939)
T TIGR00461 672 ----VGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPK-HDVVSMITGIGGSKSIGSVSAAPYGSA 746 (939)
T ss_pred ----CCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCC-CcccccccCCCCccccccccccccCcH
Confidence 0000111234577655 59886 1334 8888888776554431 110 0111123333
Q ss_pred HHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc-e--EEEEEecCCCCCcchhcccchH
Q 015230 289 LAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-M--FGFFFTEGPVYNFEDAKKSETT 362 (411)
Q Consensus 289 ~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~--~~~~~~~~~~~~~~~~~~~~~~ 362 (411)
..+..+...+..+.. ++..+....+.+|+.++|++. ++.... ...+. + +.+++... ....+.
T Consensus 747 ~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~~l~~-~~~~~~~hEfv~~~~~~--------~~~~g~ 814 (939)
T TIGR00461 747 SILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YPILFV-GTLKHVAHECILDLRPL--------KAKTGI 814 (939)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---Cccccc-CCCCceeEEEEEeccch--------hhhcCC
Confidence 444444555565554 344556777888999998763 232221 11122 1 22222110 001123
Q ss_pred HHHHHHHHHHHcCeEeccCCCc---c--eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 363 KFARFYRGMLEEGVYFAPSQFE---A--GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 363 ~~~~~~~~l~~~Gi~v~~~~~~---~--~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
....+.+.|.+.|++.....++ . +++.-..|+++||++++++.++.++
T Consensus 815 ~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 815 EAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred CHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999986543321 2 3445677999999999999877554
No 331
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.58 E-value=1e-12 Score=126.89 Aligned_cols=307 Identities=16% Similarity=0.061 Sum_probs=173.9
Q ss_pred CCHHHHHHHHHHHhhCCC--------------CCEEEEeCChHHHHHHHHHHHHhcc--C--------------------
Q 015230 74 PCLLENVLAEMVISAVPS--------------IEMVRFVNSGTEACMGVLRLARAFT--G-------------------- 117 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~--------------~~~v~~~~~g~~a~~~al~~~~~~~--~-------------------- 117 (411)
.++++.++.+|+.+.+++ ...-+||+|||+|+..||..+|... .
T Consensus 127 ~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~ 206 (522)
T TIGR03799 127 FTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYG 206 (522)
T ss_pred hHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhcc
Confidence 368889999999998731 1235889999999999998887531 0
Q ss_pred -CcEEEEEeCCcCCCchhhhhhcCC---CCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEc
Q 015230 118 -RERIIKFEGCYHGHADPFLVKAGS---GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILE 190 (411)
Q Consensus 118 -~~~vi~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~ 190 (411)
++.+|+.+..-|.....+....|. .+..++......+ |+++|++.+++ ....+.+|+..
T Consensus 207 ~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~--------------d~~~L~~~i~~~~~~g~~~~~vvat 272 (522)
T TIGR03799 207 YDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRI--------------DVDALRDKCAELAEQNIKPLAIVGV 272 (522)
T ss_pred CCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcC--------------CHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 123455555555555544444443 2334333222222 89999998874 22234555555
Q ss_pred ccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCC-Ccchhh--hhhhccCCccccccccc-
Q 015230 191 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGR- 265 (411)
Q Consensus 191 ~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~-~~d~~~--~sK~~~~G~~~g~~~~~- 265 (411)
.++.++|.+.| +++|.++|++||+++++|.+|+|. .....+.....++ ..|.++ .-|++.+...+|.++.+
T Consensus 273 aGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~ 348 (522)
T TIGR03799 273 AGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKD 348 (522)
T ss_pred ecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeC
Confidence 66677899999 999999999999999999999854 2111110001233 356655 45988765557888664
Q ss_pred HHHHHHhcCCCCccc--c------cCC--CCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 266 RDIMEMVAPAGPMYQ--A------GTL--SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 266 ~~~~~~~~~~~~~~~--~------~t~--~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
+...+.+.....+.. + .++ +-+..+ .....+++.+.. +++.++..++.+++.+.|++. +...
T Consensus 349 ~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~----~~~e 423 (522)
T TIGR03799 349 PALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ----PDFE 423 (522)
T ss_pred HHHHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC----CCeE
Confidence 455555543211110 0 011 111122 123445555443 666677777777777777654 3222
Q ss_pred E-EeeecceEEEEEecCCCCCcchh-------c--ccchHHHHHHHHHHHHcCeEeccC------CC-----cceee---
Q 015230 333 C-GGYISGMFGFFFTEGPVYNFEDA-------K--KSETTKFARFYRGMLEEGVYFAPS------QF-----EAGFT--- 388 (411)
Q Consensus 333 ~-~~~~g~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~l~~~Gi~v~~~------~~-----~~~~~--- 388 (411)
. ..+.-.++.|.+........... . ........++.+.+.+.|...... .+ ..+|+
T Consensus 424 l~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~ 503 (522)
T TIGR03799 424 LVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLA 503 (522)
T ss_pred EecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEec
Confidence 1 12223355565533222110000 0 001223356777777777655331 11 12454
Q ss_pred ecCCCHHHHHHHHHH
Q 015230 389 SLAHSSDDIQHTITA 403 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~ 403 (411)
+..+|+++++.+++.
T Consensus 504 np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 504 NPLTTHEILQDILDE 518 (522)
T ss_pred CCCCCHHHHHHHHHH
Confidence 577899999988764
No 332
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.57 E-value=1.2e-12 Score=124.12 Aligned_cols=310 Identities=14% Similarity=0.123 Sum_probs=173.0
Q ss_pred CcHHHHHHHHHHHHcCCC--C----CCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeC
Q 015230 53 ADDQVLAALGETMKKGTS--F----GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 126 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~--~----~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~ 126 (411)
.++++.+++.+.+..... + +........+.+.+++.++ .+..+++++|+.|+..++. .+.+++.||+...
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g-ae~alvv~sg~aAi~l~l~---~l~~GdeVIvs~~ 168 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG-AEDALVVNNNAAAVLLALN---TLAKGKEVIVSRG 168 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC-CCcEEEECCHHHHHHHHHH---HhCCcCEEEECCC
Confidence 578999999998887431 1 1123445677777777774 4456778889999988885 3567778888776
Q ss_pred Cc---CCCchh--hhhhcCCCCcccCCCCCCCCCCCCCCceeecCC---CCHHHHHHHHHcCCCcEEEEEEcccCCC--C
Q 015230 127 CY---HGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 196 (411)
Q Consensus 127 ~~---~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~l~~~~~~~~~~~~~vi~~~~~~~--~ 196 (411)
.+ .+.... .+...|. .+..+++ .++++++++++ ++++++++++..|. .
T Consensus 169 e~v~~ggs~~i~~~~~~~G~-------------------~~~~v~~~~~~~l~dle~aI~---~~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 169 ELVEIGGSFRIPDVMEQSGA-------------------KLVEVGTTNRTHLKDYEDAIT---ENTALLLKVHTSNYRIV 226 (454)
T ss_pred hhhhhcchhhHHHHHHHcCC-------------------EEEEeCCCCCCCHHHHHHhcC---cCCEEEEEEccCccccc
Confidence 54 222111 1111222 2222222 26888888886 35677666655433 3
Q ss_pred C--ccCCCHHHHHHHHHHHHHhCCEEEEecccccc--ccc------cCccccccCCCcchhhhh--hhccCCcccccccc
Q 015230 197 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLA------YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 264 (411)
Q Consensus 197 G--~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~--~~g------~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~~ 264 (411)
| ...+ +++|.++|++||+++++|.+. |. ..+ .+...+......|++++| |+++|. ..|++++
T Consensus 227 G~~~~~d----l~~I~~la~~~g~~vivD~~s-G~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g 300 (454)
T TIGR00474 227 GFTEEVS----IAELVALGREHGLPVMEDLGS-GSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVG 300 (454)
T ss_pred CCCCCCC----HHHHHHHHHHcCCeEEEECCC-cccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEE
Confidence 5 3566 999999999999999999753 22 111 111122223456888777 999863 2777889
Q ss_pred cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--------------CChHHHHHHHHHHHHHHHHHHHHhcCC
Q 015230 265 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--------------PGTYEYLNKITGELTQGIIDAGKKAGH 330 (411)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~~ 330 (411)
++++++.+.... ....+...-...++..+.+..+.. ....++.++++..+.+.|++... .+.
T Consensus 301 ~~~~i~~l~~~~---l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~ 376 (454)
T TIGR00474 301 KKELIERLKKNP---LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG-PGF 376 (454)
T ss_pred CHHHHHhhhhch---hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc-CCc
Confidence 988887765311 111111122233333333433222 11224666677777777766421 111
Q ss_pred ceEE------eeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcC--eEeccCCCcceee-ecCCCHHHHHHHH
Q 015230 331 AICG------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPSQFEAGFT-SLAHSSDDIQHTI 401 (411)
Q Consensus 331 ~~~~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--i~v~~~~~~~~~~-~~~~t~~~i~~~i 401 (411)
...+ -|.|.+-.-.+ +.+.....+.......+.+.|++.. |+.+. ....+.+ +.+..++|++.++
T Consensus 377 ~~~~~~~~~~~ggg~~p~~~l-----~~~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~-~~~~~~ld~r~~~~~~~~~~~ 450 (454)
T TIGR00474 377 ELEIVPGLSQVGGGSLPDERL-----PSYAVTLTPDGLSAEKLEARLRELPPPIIGRI-EDDRFLLDLRTLLEDEEELLI 450 (454)
T ss_pred eEEEEEcCCcccCCCCcCCCC-----CeEEEEEecCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHH
Confidence 1111 11222211111 1111111122223478888888764 66653 3344666 5677888998888
Q ss_pred HHH
Q 015230 402 TAA 404 (411)
Q Consensus 402 ~~l 404 (411)
++|
T Consensus 451 ~~~ 453 (454)
T TIGR00474 451 EAL 453 (454)
T ss_pred HHh
Confidence 776
No 333
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=3.3e-13 Score=138.04 Aligned_cols=300 Identities=16% Similarity=0.170 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHhhCCCCCEEEE-eCChHHHHHHHHHHHHhc--c-C--CcEEEEEeCCcCCCchhhhhhcCCCCcccCCC
Q 015230 76 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAF--T-G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLP 149 (411)
Q Consensus 76 ~~~~~l~~~l~~~~~~~~~v~~-~~~g~~a~~~al~~~~~~--~-~--~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~ 149 (411)
+...++.+++++.++ .+.+.+ .++|+++..++|..++.+ . + +..+++.+.+-|+.....+...|-.+..++..
T Consensus 542 ~~i~e~q~~l~eltG-~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d 620 (954)
T PRK05367 542 ELIDQLEAWLAEITG-YDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACD 620 (954)
T ss_pred HHHHHHHHHHHHHHC-CCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCC
Confidence 566788899999885 344554 446777776777555543 1 1 12345555666655555566666655555443
Q ss_pred CCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-c
Q 015230 150 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 228 (411)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g 228 (411)
.. +.. |+++|++.++.++.++++|++...+..|+...+ +++|.++|+++|+++++|.++. +
T Consensus 621 ~~-G~i-------------D~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 621 EN-GNI-------------DLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred CC-CCc-------------CHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh
Confidence 22 221 899999999865456777766654444333356 9999999999999999999995 2
Q ss_pred cccccCccccccCCCcchhhhh--hhcc----CCcc-cccccccHHHHHHhcCCCC---ccc--ccCCCCCHH----HHH
Q 015230 229 FRLAYGGAQEYFGVTPDLTTLG--KIIG----GGLP-VGAYGGRRDIMEMVAPAGP---MYQ--AGTLSGNPL----AMT 292 (411)
Q Consensus 229 ~~~g~~~~~~~~~~~~d~~~~s--K~~~----~G~~-~g~~~~~~~~~~~~~~~~~---~~~--~~t~~~~~~----~~a 292 (411)
+ .+ .. ..-....|+++++ |+|+ +|-| +|.+.+++.+...+..... ... .++....+. .+.
T Consensus 683 l-~~-l~--~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~ 758 (954)
T PRK05367 683 Q-VG-LA--RPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILP 758 (954)
T ss_pred c-cC-CC--ChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHH
Confidence 2 01 00 0011234666544 9985 2334 7778777655544432110 000 011111222 111
Q ss_pred HHHHHHHHHhcCChHHHHH---HHHHHHHHHHHHHHHhcCCceEEeeecc---eEEEEEecCCCCCcchhcccchHHHHH
Q 015230 293 AGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISG---MFGFFFTEGPVYNFEDAKKSETTKFAR 366 (411)
Q Consensus 293 ~~~~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (411)
.+...+..+..+.+++..+ .+++|+.++|++. ++.... ...+. -..+++...+. ..+.....
T Consensus 759 ~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~-~~~~~~~~e~i~~~~~~~~--------~~g~~~~d 826 (954)
T PRK05367 759 ISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYT-GANGRVAHECILDLRPLKE--------STGITVDD 826 (954)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCcccc-CCCCCcccceEEEeecccc--------cCCCCHHH
Confidence 2333444444454554444 8888999999774 232211 00011 12222211100 11123477
Q ss_pred HHHHHHHcCeEeccCC---Ccceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 367 FYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 367 ~~~~l~~~Gi~v~~~~---~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+.+.|.+.|+...... ...+++ .-..|++|||++++++..+..+
T Consensus 827 i~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 827 IAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred HHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHH
Confidence 9999999999876532 223444 5677999999999999887654
No 334
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.57 E-value=4.7e-13 Score=123.94 Aligned_cols=307 Identities=14% Similarity=0.023 Sum_probs=185.3
Q ss_pred CcHHHHHHHHHHHHcCC--CCC------CCC---HHHHHHHHHHHhhCCC--CCEEEEeCC-hHHHHHHHHHHHHhccCC
Q 015230 53 ADDQVLAALGETMKKGT--SFG------APC---LLENVLAEMVISAVPS--IEMVRFVNS-GTEACMGVLRLARAFTGR 118 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~--~~~------~~~---~~~~~l~~~l~~~~~~--~~~v~~~~~-g~~a~~~al~~~~~~~~~ 118 (411)
.|..+++++.+.+.+.. +.+ ..+ +..+++.+.+.+.++. ..+++|+.| ||+|+++++... ..++
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl--~~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL--LAEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc--CCCC
Confidence 46678899999888521 111 113 5667778888888862 346777755 999999999742 2256
Q ss_pred cEEEEEeCCcCCCchhhhhhc-CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 119 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 119 ~~vi~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
+++++...+..+....-.... |. +..+..+..... ....|+++++ ++ .++++|.+..+.+++|
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~----------~~~~~~~~~~--~~---~~~~~v~~th~ETstG 144 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNY----------TKIPDPSTWE--IS---EDAAYVHYCANETIHG 144 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCC----------CCCCCHHhcC--CC---CCCCEEEEcCCCCccc
Confidence 777777777776544333222 33 333221100000 0000444443 11 3678888888888899
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchhhhhhhccCCcc-cccccccHHHHHHhcCC
Q 015230 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLGKIIGGGLP-VGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 198 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~~~sK~~~~G~~-~g~~~~~~~~~~~~~~~ 275 (411)
+..+ ++++.+++++++|.+++ .| ....++.++ .-+.+..|+++. + +|.++.++++++.+.+.
T Consensus 145 v~~~---------~l~~~~~~l~iVDavss---~g~~~id~~~~d--~~~~ssqK~lgP--~Glg~l~~s~~~~~~~~~~ 208 (349)
T TIGR01364 145 VEFR---------ELPDVKNAPLVADMSSN---ILSRPIDVSKFG--LIYAGAQKNIGP--AGLTVVIVRKDLLGRASRI 208 (349)
T ss_pred Eecc---------eecccCCCeEEEEcccc---ccCccCCHHHcc--EEEEecccccCC--CceEEEEECHHHHhhcccC
Confidence 8765 67777899999999997 22 222233222 223466799862 3 88889999998876542
Q ss_pred CCccc--------cc-CCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcC-CceE---Eeeec
Q 015230 276 GPMYQ--------AG-TLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAG-HAIC---GGYIS 338 (411)
Q Consensus 276 ~~~~~--------~~-t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~---~~~~g 338 (411)
.+.+. .. .++++.....+..++++.+.+ +++.++.+++.+++++.|+++ + +... .....
T Consensus 209 ~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~----~gl~~~~~~~~~rs 284 (349)
T TIGR01364 209 TPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS----NGFYRNPVDPRNRS 284 (349)
T ss_pred CCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC----CCeeccCCCHHHcC
Confidence 11100 11 235666777777788887764 344455566666666666655 3 2111 01122
Q ss_pred -ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceeee--cCCCHHHHHHHHHHHHHHHHh
Q 015230 339 -GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~~--~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.++.|.+.+ .....++.+.+.++|+.+.++. ...+|++ ..+|.+|++++++.|++++++
T Consensus 285 ~~v~sf~~~~-------------~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 285 RMNVVFTLGN-------------EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred CeEEEEecCC-------------hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 345555422 1112567678899999776664 2457875 566899999999999998754
No 335
>PLN02590 probable tyrosine decarboxylase
Probab=99.57 E-value=3.4e-12 Score=123.10 Aligned_cols=312 Identities=10% Similarity=-0.001 Sum_probs=182.5
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------EEEEeCChHHHHHHHHHHHHhcc--------CCcEEEEEeCCcCCCchhhhh
Q 015230 74 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFLV 137 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~--------~v~~~~~g~~a~~~al~~~~~~~--------~~~~vi~~~~~~~~~~~~~~~ 137 (411)
..+.+..+.+|+++.++-++ .-+|++|||+|+..+|.++|... .+.-++..+..-|.+..-++.
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 36788999999999997333 36889999999999998886531 123345555556666666666
Q ss_pred hcCCC---CcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHH
Q 015230 138 KAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 211 (411)
Q Consensus 138 ~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~ 211 (411)
..|-+ ++.++.+....... |+++|+++|++. ...+.+|+.+....++|.+-| +++|.+
T Consensus 248 ilGlg~~~vr~Vp~d~~~~~~m------------d~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~ 311 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTNYGM------------PPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGN 311 (539)
T ss_pred HcCCCcccEEEEeCCCCCCCcC------------CHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHH
Confidence 66643 44444432111111 899999999752 234677777777777899988 999999
Q ss_pred HHHHhCCEEEEecccccc-ccccCccccccCCC-cchh--hhhhhccCCcccccccccH--HHHHHhcCCCCcc------
Q 015230 212 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT-PDLT--TLGKIIGGGLPVGAYGGRR--DIMEMVAPAGPMY------ 279 (411)
Q Consensus 212 l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~-~d~~--~~sK~~~~G~~~g~~~~~~--~~~~~~~~~~~~~------ 279 (411)
+|++||+++++|.+|.|+ ...+..-.-..|+. .|-+ ..-|++...+..|.+..+. .+.+.+.....++
T Consensus 312 i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999999876 32211111112332 3433 4679998767788775543 2333332111110
Q ss_pred -----ccc--CC-CCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEE-eeecceEEEEEec
Q 015230 280 -----QAG--TL-SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTE 347 (411)
Q Consensus 280 -----~~~--t~-~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~ 347 (411)
... +. ..-.+.......+++.+.. .+++.+..++++++.+.|++. +....+ ...-.++.|.+..
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~----~~fel~~~~~l~iVcFr~~~ 467 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQD----PSFEVVTTRYFSLVCFRLAP 467 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCceEEEEEEecC
Confidence 000 11 1111223333344444333 455556666666666666554 322211 2222344554432
Q ss_pred CCCCCcchhcccchHHHHHHHHHHHHcCeEe-ccC---CCcceee---ecCCCHHHHHHHHHHHHHHHHh
Q 015230 348 GPVYNFEDAKKSETTKFARFYRGMLEEGVYF-APS---QFEAGFT---SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-~~~---~~~~~~~---~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..... ........++.+.+.+.|... .+. +-..+|+ +..+++++++.+++.|.+...+
T Consensus 468 ~~~~~-----~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~ 532 (539)
T PLN02590 468 VDGDE-----DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASK 532 (539)
T ss_pred CCCCH-----HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 11000 001223467777777776544 332 2223454 5778999999999999887654
No 336
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.57 E-value=3.4e-13 Score=125.77 Aligned_cols=305 Identities=11% Similarity=-0.039 Sum_probs=172.5
Q ss_pred CcHHHHHHHHHHHHcCC---CC-CCCCHHHHHHHHHHHhhCC-C-CCEEEEe-CChHHHHHHHHHHHHhccCCcEEEEEe
Q 015230 53 ADDQVLAALGETMKKGT---SF-GAPCLLENVLAEMVISAVP-S-IEMVRFV-NSGTEACMGVLRLARAFTGRERIIKFE 125 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~---~~-~~~~~~~~~l~~~l~~~~~-~-~~~v~~~-~~g~~a~~~al~~~~~~~~~~~vi~~~ 125 (411)
.+|++++++........ +. .-..+..++..+.+++.++ . ..+|+|+ +|||.+++.++... ..+ +.++..
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---~~~-~~l~i~ 89 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---IEK-KSLHLS 89 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc---ccc-cccEEe
Confidence 57888888764421111 11 1124556677778888886 2 3478886 66999999999743 222 233333
Q ss_pred CCcCCCchhhhh-hc--CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCC
Q 015230 126 GCYHGHADPFLV-KA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 202 (411)
Q Consensus 126 ~~~~~~~~~~~~-~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~ 202 (411)
.+.++....-.. .. ...+..+..+. + +.++..+ ..++++|.+.++.+.+|++.|
T Consensus 90 ~G~~~~~~~~~a~~~~~~~~~~~~~~~~-----------------~--~~~~~~~---~~~~~lV~~~h~et~tG~~~p- 146 (361)
T TIGR01366 90 FGEFSSKFAKAVKLAPWLGEPIIVTADP-----------------G--SAPEPQA---DPGVDVIAWAHNETSTGVAVP- 146 (361)
T ss_pred cCHHHHHHHHHHHhhhccCCceEEecCC-----------------C--CCCCCcc---CCCCCEEEEcccCCccceecc-
Confidence 344432222111 11 11222222111 0 0111111 247889999999999999999
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchh--hhhhhccC-CcccccccccHHHHHHhcCCCC-
Q 015230 203 PDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRRDIMEMVAPAGP- 277 (411)
Q Consensus 203 ~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~--~~sK~~~~-G~~~g~~~~~~~~~~~~~~~~~- 277 (411)
+++| ++++|+++++|.+++ .| ....++ . .|++ +..|++++ |. ++.++.++++++.+.+...
T Consensus 147 ---i~~I---~~~~g~~~iVDavqs---~g~~~idv~--~--~D~~~~s~~K~lg~~~G-l~~~~~s~~~~~~~~~~~~~ 212 (361)
T TIGR01366 147 ---VRRP---EGSDDALVVIDATSG---AGGLPVDIA--E--TDVYYFAPQKNFASDGG-LWLAIMSPAALERIEAIAAS 212 (361)
T ss_pred ---cccc---cccCCCeEEEEcCcc---ccCCCCCHH--H--CCEEEEEchhhcCCCCc-eEEEEECHHHHhhhhcccCC
Confidence 7776 689999999999997 22 112222 1 3554 55698884 11 4445668888776652110
Q ss_pred -----cc------------cccCCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee
Q 015230 278 -----MY------------QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336 (411)
Q Consensus 278 -----~~------------~~~t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 336 (411)
.+ .....+++.....+..++++.+.+ ++..++.+++.+++++.++++............
T Consensus 213 ~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~ 292 (361)
T TIGR01366 213 GRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGK 292 (361)
T ss_pred CCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhh
Confidence 01 121234444444456667776654 334466667777777777766311111100000
Q ss_pred ec-ceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC----Ccceeee--cCCCHHHHHHHHHHHHHHHH
Q 015230 337 IS-GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 337 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~----~~~~~~~--~~~t~~~i~~~i~~l~~~~~ 409 (411)
.. ....+.+ +++.+...+.+.|.++||.+.++. ...+|++ ...|.+++++++++|+++++
T Consensus 293 ~s~~v~~v~~-------------~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 293 RSQVVGTIDF-------------VDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred cccceEEEEC-------------CCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHh
Confidence 11 1111222 122234678899999999997762 2347773 57799999999999999988
Q ss_pred hC
Q 015230 410 QI 411 (411)
Q Consensus 410 ~~ 411 (411)
+|
T Consensus 360 ~~ 361 (361)
T TIGR01366 360 RL 361 (361)
T ss_pred hC
Confidence 75
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.56 E-value=1.2e-12 Score=130.92 Aligned_cols=301 Identities=12% Similarity=0.106 Sum_probs=174.2
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeC-ChHHHHHHHHHHHHhc------cCCcEEEEEeCCcCCCchhhhhhcCCCCcccC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVN-SGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLG 147 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~-~g~~a~~~al~~~~~~------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~ 147 (411)
-+...++.+++++++ +.+.+.+-+ +|+.+..+++++.+.+ .+++++++ +.+-|+.....+...|..+..++
T Consensus 542 lq~i~elq~~l~eLt-Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLI-p~saHgtNpasa~~~GieVv~Vp 619 (954)
T PRK12566 542 RAMIDELEAWLCAIT-GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLI-PSSAHGTNPASAQMAGMRVVIVE 619 (954)
T ss_pred HHHHHHHHHHHHHHH-CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEe-cccccccCHHHHHHCCCEEEEec
Confidence 445567778888888 555555554 7888887777666554 23444444 44555544444445565555544
Q ss_pred CCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 148 LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
... .+.. |+++|++.++++.+++++|++..+++.|+...+ +++|.++|+++|+++++|.++.
T Consensus 620 ~D~-~G~i-------------Dle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~ 681 (954)
T PRK12566 620 CDP-DGNV-------------DLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANL 681 (954)
T ss_pred cCC-CCCc-------------CHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeCh
Confidence 432 2322 899999999866667888877666555544334 9999999999999999999995
Q ss_pred -ccccccCccccccCCCcchhhh--hhhcc----CCcc-cccccccHHHHHHhcCCCC-------cccc---cCCCCCHH
Q 015230 228 -GFRLAYGGAQEYFGVTPDLTTL--GKIIG----GGLP-VGAYGGRRDIMEMVAPAGP-------MYQA---GTLSGNPL 289 (411)
Q Consensus 228 -g~~~g~~~~~~~~~~~~d~~~~--sK~~~----~G~~-~g~~~~~~~~~~~~~~~~~-------~~~~---~t~~~~~~ 289 (411)
+. ...-.. -....|++++ .|+|+ +|.| +|.+...+++...+..... ...+ +.+..+..
T Consensus 682 ~a~--~~l~~P--g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~ 757 (954)
T PRK12566 682 NAQ--VGLARP--ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSAS 757 (954)
T ss_pred hhc--cCCCCh--hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHH
Confidence 21 010000 1234466654 59885 2344 7777777776666653210 0111 12222323
Q ss_pred HHHHHHHHHHHHhcCChHH---HHHHHHHHHHHHHHHHHHhcCCceEEeeecc-eEEEEEecCCCCCcchhcccchHHHH
Q 015230 290 AMTAGIHTLKRLKEPGTYE---YLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFA 365 (411)
Q Consensus 290 ~~a~~~~~l~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (411)
.+.++...+..+..+ +.+ ....+.+|++++|.+. ++.... ...+. +-.+.+.-...+. ..+.+..
T Consensus 758 ~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~---~~v~~~-~~~~~~~hEfii~~~~l~~------~~g~~~~ 826 (954)
T PRK12566 758 ILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA---FPVLYR-GRNERVAHECILDLRPLKA------QTGISEE 826 (954)
T ss_pred HHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh---CCCCcC-CCCCCeeeEEEEEcccccc------ccCCCHH
Confidence 334444445544434 322 2355788888888763 333321 11111 1111111110000 1112336
Q ss_pred HHHHHHHHcCeEeccCC---Ccceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 366 RFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 366 ~~~~~l~~~Gi~v~~~~---~~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
.+.+.|.+.||...... ...+++ .-..+++|||+++++|..+.++
T Consensus 827 dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 827 DVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHH
Confidence 78899999898765321 234554 4677999999999999988765
No 338
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.56 E-value=9.2e-13 Score=110.75 Aligned_cols=324 Identities=17% Similarity=0.163 Sum_probs=196.3
Q ss_pred CCcHHHHHHHHHHHHcCCC--CC--C-----CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEE
Q 015230 52 HADDQVLAALGETMKKGTS--FG--A-----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERII 122 (411)
Q Consensus 52 ~~~~~v~~a~~~~l~~~~~--~~--~-----~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi 122 (411)
...++.++|+.+--+-.+. ++ + .......+.+.+++.+ +.|.+-+|+|+-+|-.++|. .+.++++.+
T Consensus 28 iLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl-g~D~~R~t~GARe~KfavMh---al~~~gd~v 103 (382)
T COG1103 28 ILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL-GMDEVRVTAGAREAKFAVMH---ALCKEGDWV 103 (382)
T ss_pred cCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh-CCceeeecccchhhHHHHHH---HhccCCCEE
Confidence 3778888888776544221 11 0 1222233333333333 99999999999999999887 566788888
Q ss_pred EEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc----CCCcEEEEEEcccCCCCCc
Q 015230 123 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN----NKGEIAAIILEPVVGNSGF 198 (411)
Q Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~----~~~~~~~vi~~~~~~~~G~ 198 (411)
+.+.-.|-.+.-++...|.++...+-...+ .+.+ +++...+.|++ ..+.+++.++..+.++.|.
T Consensus 104 V~D~~aHYttyvAAEragl~v~eVp~tg~P---------ey~i---~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGN 171 (382)
T COG1103 104 VVDSLAHYTTYVAAERAGLNVAEVPNTGYP---------EYKI---TPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGN 171 (382)
T ss_pred EEcCcchHHHHHHHHhcCCeEEecCCCCCC---------ceEe---cHHHHHHHHHHHHhccCCCceEEEEeccCCCcCC
Confidence 889888877777777777766664432222 2222 55555555553 3345888999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccCCcccccccccHHHHHHhcCCC
Q 015230 199 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG 276 (411)
Q Consensus 199 ~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~~~~~~~~~~~~ 276 (411)
+.+ .++++++|+++|++++...+|+ .|.. ......+.+|++ |--|++++.-|+|.+..+++..+......
T Consensus 172 l~D----akkva~ic~e~gvPlllN~AYt---~Grm-pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~S 243 (382)
T COG1103 172 LAD----AKKVAKICREYGVPLLLNCAYT---VGRM-PVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRS 243 (382)
T ss_pred chh----hHHHHHHHHHcCCceEeeccee---eccc-cccccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhc
Confidence 999 9999999999999999999997 3321 112234566765 44589986669999999888876653211
Q ss_pred -C-------cccccCCCCCHH-HHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHH--HhcCCceEEeeecceEEEE
Q 015230 277 -P-------MYQAGTLSGNPL-AMTAGI-HTLKRLKEPGTYEYLNKITGELTQGIIDAG--KKAGHAICGGYISGMFGFF 344 (411)
Q Consensus 277 -~-------~~~~~t~~~~~~-~~a~~~-~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~g~~~~~~ 344 (411)
. -+.+-|..+.|+ .+.|.. ...+.. +++ +.-.+..+++.+.|+++. .+.+.. ++. --++.|+
T Consensus 244 g~~~~~KEvellGCT~rGapivTlmASfP~V~eRV--krW-deEv~kaR~fv~elEkigg~~qlG~r--Pk~-HdLm~Fe 317 (382)
T COG1103 244 GRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV--KRW-DEEVEKARWFVAELEKIGGVKQLGER--PKN-HDLMKFE 317 (382)
T ss_pred ccccccceeeeecccccCchHHHHHhcCHHHHHHH--HHH-HHHHHHHHHHHHHHHHhhhHHHhCCC--Ccc-cceeeec
Confidence 1 111223233333 222211 111211 222 223456778888888874 222221 111 1133333
Q ss_pred EecCCCCCcchhcccchHHHHHHHHHHHHcCeE-eccCCCcceeee-cCCCHHHHHHHHHHHHHHHHh
Q 015230 345 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPSQFEAGFTS-LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-v~~~~~~~~~~~-~~~t~~~i~~~i~~l~~~~~~ 410 (411)
-+.. ...........-.+++.|+++||. +.|+....+-++ +..+.|+++..++++++++.+
T Consensus 318 tp~f-----~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 318 TPVF-----HEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred CchH-----HHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 2110 000000001113577888888875 456655556664 678999999999999998764
No 339
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.56 E-value=2.1e-12 Score=132.16 Aligned_cols=345 Identities=14% Similarity=0.069 Sum_probs=195.4
Q ss_pred CCEEEeccCCccccccCCCcH-HHHHHHHHHHHcCCCC--C-C-----CCHHHHHHHHHHHhhCC-CCC--EEEEeCChH
Q 015230 35 GNEYIDYVGSWGPAIIGHADD-QVLAALGETMKKGTSF--G-A-----PCLLENVLAEMVISAVP-SIE--MVRFVNSGT 102 (411)
Q Consensus 35 g~~~~d~~~~~~~~~~g~~~~-~v~~a~~~~l~~~~~~--~-~-----~~~~~~~l~~~l~~~~~-~~~--~v~~~~~g~ 102 (411)
+..|+|..+. .+ .++ .+.+++.+.+...... . + ..+..++..+.+++.++ ..+ .|+||+|+|
T Consensus 34 ~~iYLD~Aat---t~---~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT 107 (805)
T PLN02724 34 GVVYLDHAGA---TL---YSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT 107 (805)
T ss_pred CCEeEeCCCC---CC---CCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH
Confidence 3578886655 22 234 4444444444432111 1 1 13456777788888887 344 589999999
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh-c--CCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHH-
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-A--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE- 178 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~- 178 (411)
+|+..+.... ...+++.|++. ...|......... . |..+..++.+...+.+..... .+.. +.+++++.++
T Consensus 108 ~alnlva~~l-~~~~gd~Iv~t-~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g---~~~~-~~~~l~~~~~~ 181 (805)
T PLN02724 108 AALKLVGETF-PWSSESHFCYT-LENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQG---SVVV-KSRGLQRRNTS 181 (805)
T ss_pred HHHHHHHHHC-CCCCCCeEEEe-eccccchHHHHHHHHHcCCeEEeccchhcccccccccc---cccc-chhhhhhhhhh
Confidence 9999887632 23455666664 4444444443332 1 333333322211110000000 0000 1244555431
Q ss_pred ---c---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHh--------CCEEEEeccccccccccCccccccCCCc
Q 015230 179 ---N---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--------GALLIFDEVMTGFRLAYGGAQEYFGVTP 244 (411)
Q Consensus 179 ---~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~--------~~~li~De~~~g~~~g~~~~~~~~~~~~ 244 (411)
. ..+++++|.+....|.+|.+.| ++.|.++++.. ++++++|.+|+ .|. ...+.-.+.+
T Consensus 182 ~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~---~g~-~piDv~~~~~ 253 (805)
T PLN02724 182 KLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG---CGT-SPPDLSRYPA 253 (805)
T ss_pred hhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh---cCC-CCCChhhcCC
Confidence 1 1235678999999999999999 87765555532 36899999996 222 2233334467
Q ss_pred chhh--hhhhccCCcccccccccHHHHHHhcCCCCccc---------------------ccCCCCCHHHHHHHHHHHHHH
Q 015230 245 DLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ---------------------AGTLSGNPLAMTAGIHTLKRL 301 (411)
Q Consensus 245 d~~~--~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~---------------------~~t~~~~~~~~a~~~~~l~~~ 301 (411)
|+++ .-|++++-.-+|++++++++.+.+.+...... .-.-+.|..+.++..++++.+
T Consensus 254 Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l 333 (805)
T PLN02724 254 DFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLL 333 (805)
T ss_pred CEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHH
Confidence 8765 45988741228899888888776653110000 001145556666666777766
Q ss_pred hc---CChHHHHHHHHHHHHHHHHHHHHhcC--CceE---------EeeecceEEEEEecCCCCCcchhcccchHHHHHH
Q 015230 302 KE---PGTYEYLNKITGELTQGIIDAGKKAG--HAIC---------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 367 (411)
Q Consensus 302 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~---------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (411)
.+ +++.++.+++.+++.+.|+++....+ .+.. ....+.++.|.+.+.+.. ......+
T Consensus 334 ~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~---------~v~~~~v 404 (805)
T PLN02724 334 NRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGS---------WVGHREV 404 (805)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCC---------EeCHHHH
Confidence 55 67778888888999888887731101 1111 123577888888654311 1112345
Q ss_pred HHHHHHcCeEeccCCC---------------------------------------cceeee--cCCCHHHHHHHHHHHHH
Q 015230 368 YRGMLEEGVYFAPSQF---------------------------------------EAGFTS--LAHSSDDIQHTITAAEK 406 (411)
Q Consensus 368 ~~~l~~~Gi~v~~~~~---------------------------------------~~~~~~--~~~t~~~i~~~i~~l~~ 406 (411)
.+.+.++||.++.|.. ..+|++ ...|.+|+|++++.|++
T Consensus 405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 5555667888866532 225554 67799999999999998
Q ss_pred HH
Q 015230 407 VL 408 (411)
Q Consensus 407 ~~ 408 (411)
.+
T Consensus 485 ~~ 486 (805)
T PLN02724 485 SF 486 (805)
T ss_pred Hh
Confidence 64
No 340
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.54 E-value=5.4e-13 Score=124.40 Aligned_cols=309 Identities=13% Similarity=0.012 Sum_probs=175.5
Q ss_pred CcHHHHHHHHHHHHcCCC-----CCCC------CHHHHHHHHHHHhhCC--CCCEEEEeCC-hHHHHHHHHHHHHhccCC
Q 015230 53 ADDQVLAALGETMKKGTS-----FGAP------CLLENVLAEMVISAVP--SIEMVRFVNS-GTEACMGVLRLARAFTGR 118 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~-----~~~~------~~~~~~l~~~l~~~~~--~~~~v~~~~~-g~~a~~~al~~~~~~~~~ 118 (411)
.++.|++++.+.+.+... +... .+..++..+.+++.++ ..+.++||+| +|++++.++.....-.++
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~ 89 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT 89 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 688999999998854211 0011 2556778888888887 4568999977 999999999753211113
Q ss_pred cEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC-HHHHHHHHHcCCCcEEEEEEcccCCCCC
Q 015230 119 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSG 197 (411)
Q Consensus 119 ~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~l~~~~~~~~~~~~~vi~~~~~~~~G 197 (411)
..+|+ .+.|..+........|..+..+..+..... .+ .+..+..++ +++++|.+..+.+.+|
T Consensus 90 ~~~i~-~g~~~~~~~~~a~~~g~~~~~~~~~~~g~~-------------~~~~~~~~~~~~---~~~~lV~~~h~~t~tG 152 (355)
T cd00611 90 ADYVV-TGAWSAKAAKEAKRYGGVVVIVAAKEEGKY-------------TKIPDVETWDLA---PDAAYVHYCSNETIHG 152 (355)
T ss_pred EEEEE-CCHHHHHHHHHHHhcCCCcEEEecccccCC-------------CCCCCHhhcCCC---CCCCEEEEeCCccccc
Confidence 33333 233322111111222333333322211000 01 111112222 4677888888888888
Q ss_pred ccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchhhhhhhccCCcc-cccccccHHHHHHhcCC
Q 015230 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLGKIIGGGLP-VGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 198 ~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~~~sK~~~~G~~-~g~~~~~~~~~~~~~~~ 275 (411)
...+ ++++.||+++++|.+|+ .| ....++.++ .++.+..|.++. + +|.++.++++++.+.+.
T Consensus 153 ~~~~---------~i~~~~g~~~~VDa~qs---~g~~~idv~~~~--~~~ss~~K~lGP--~G~g~l~~~~~~~~~~~~~ 216 (355)
T cd00611 153 VEFD---------EVPDTGGVPLVADMSSN---ILSRPIDVSKFG--VIYAGAQKNLGP--AGVTVVIVRKDLLGKARKI 216 (355)
T ss_pred EEcc---------eecccCCCeEEEEcccc---ccCCCCCHHHhC--EEEeecccccCC--CceEEEEECHHHHhhcccC
Confidence 7643 45556999999999997 22 222223333 344456798752 3 88889999988776542
Q ss_pred CCccc--------cc-CCCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEe-eecceE
Q 015230 276 GPMYQ--------AG-TLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMF 341 (411)
Q Consensus 276 ~~~~~--------~~-t~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~ 341 (411)
.+.+. .. ..++|.....+..++++.+.+ +++.++.+++.+++++.|+++..-+....... ..+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vv 296 (355)
T cd00611 217 TPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNV 296 (355)
T ss_pred CCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEE
Confidence 11110 01 235556666777777887654 34456666666667766666511010111111 122446
Q ss_pred EEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceeee--cCCCHHHHHHHHHHHHHH
Q 015230 342 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~~--~~~t~~~i~~~i~~l~~~ 407 (411)
.|.+.+. ....++.+.+.++|+++.++. ...+|++ ...|++|++++++.|+++
T Consensus 297 sf~~~~~-------------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 297 PFRLGKE-------------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EEEcCCh-------------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 6655321 111455578889999865553 2457885 455999999999999885
No 341
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.54 E-value=4.1e-13 Score=118.14 Aligned_cols=186 Identities=19% Similarity=0.156 Sum_probs=127.8
Q ss_pred cccCCCcHHHHHHHHHHHHcCCCCC-CCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeC
Q 015230 48 AIIGHADDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 126 (411)
Q Consensus 48 ~~~g~~~~~v~~a~~~~l~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~ 126 (411)
..+.+.+++=.+++...-..+..|. ....-...+.++++.+-++. ..+.+.||..|+..|+.. ....++.|+....
T Consensus 33 Tsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~-aa~a~aSG~AA~~~ai~~--la~aGD~iVss~~ 109 (426)
T COG2873 33 TSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGV-AALAVASGQAAITYAILN--LAGAGDNIVSSSK 109 (426)
T ss_pred eeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcch-hhhhhccchHHHHHHHHH--hccCCCeeEeecc
Confidence 5566666554444433222122221 11344467777777777543 345667899999998863 2345677777766
Q ss_pred CcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHH
Q 015230 127 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFL 206 (411)
Q Consensus 127 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l 206 (411)
-|-|.+....... +..+.++.+++.+|++.++++++ +++++|++|..-|+.+.+.+ +
T Consensus 110 LYGGT~~lf~~tl----------------~~~Gi~v~fvd~~d~~~~~~aI~---~nTkavf~EtigNP~~~v~D----i 166 (426)
T COG2873 110 LYGGTYNLFSHTL----------------KRLGIEVRFVDPDDPENFEAAID---ENTKAVFAETIGNPGLDVLD----I 166 (426)
T ss_pred ccCchHHHHHHHH----------------HhcCcEEEEeCCCCHHHHHHHhC---cccceEEEEeccCCCccccC----H
Confidence 6766554432221 22345677888889999999998 57999999999999999999 9
Q ss_pred HHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccC-Ccccccccc
Q 015230 207 NAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 264 (411)
Q Consensus 207 ~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~-G~~~g~~~~ 264 (411)
+.|.++|++||+++|+|.+.+ .++......+..|++ |++|+++| |--+|.++.
T Consensus 167 e~ia~iAh~~gvpliVDNT~a-----tpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 167 EAIAEIAHRHGVPLIVDNTFA-----TPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred HHHHHHHHHcCCcEEEecCCC-----cceecchhhcCCCEEEEeecccccCCccccceEEE
Confidence 999999999999999999986 223344445556765 89999997 777887754
No 342
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.52 E-value=2.3e-12 Score=113.80 Aligned_cols=285 Identities=15% Similarity=0.115 Sum_probs=170.4
Q ss_pred CCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-
Q 015230 73 APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL- 148 (411)
Q Consensus 73 ~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~- 148 (411)
+..-.++.+|+.+.++=+ .+++|++|.|++.|+...|++. ...+++.|++.-|-|+-.+.......+..+-+.-.
T Consensus 114 Gv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~-~~~~~~GvliPiPQYPLYsAti~l~~~~~v~YyLdE 192 (475)
T KOG0258|consen 114 GVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLL-IAGKKTGVLIPIPQYPLYSATISLLGGTQVPYYLDE 192 (475)
T ss_pred CChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHH-hcCCCCceEeecCCCchhHHHHHHhCCcccceeecc
Confidence 347778899999988765 5889999999999999999875 33467789999999985544444444443333211
Q ss_pred CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC---CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 015230 149 PDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 225 (411)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~---~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~ 225 (411)
.-.++. |.+++++.+++.. +-.+++++||.|+.|-+... +-+++|..+|.++++.|+.||+
T Consensus 193 e~~W~l--------------d~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~--e~ie~i~~fa~~~~l~llaDEV 256 (475)
T KOG0258|consen 193 ESNWSL--------------DVAELERSVDEARKGINPRALVVINPGNPTGQVLSE--ENIEGIICFAAEEGLVLLADEV 256 (475)
T ss_pred ccCCCC--------------CHHHHHHHHHHHhccCCceEEEEECCCCccchhhcH--HHHHHHHHHHHHcCeEEechHH
Confidence 222222 8899988887632 23567999998887665554 4499999999999999999999
Q ss_pred cccc--ccccCcc-----ccccC-CCcc------hhhhhhhccC--Ccccccc-cc--cHHHHHHhcCCCCcccccCCCC
Q 015230 226 MTGF--RLAYGGA-----QEYFG-VTPD------LTTLGKIIGG--GLPVGAY-GG--RRDIMEMVAPAGPMYQAGTLSG 286 (411)
Q Consensus 226 ~~g~--~~g~~~~-----~~~~~-~~~d------~~~~sK~~~~--G~~~g~~-~~--~~~~~~~~~~~~~~~~~~t~~~ 286 (411)
|-.- ..+..|. ..+.+ ..++ +.+.||++.| |.|-|++ +. .++..+.+.+......+.+
T Consensus 257 YQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~--- 333 (475)
T KOG0258|consen 257 YQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQ--- 333 (475)
T ss_pred HHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCC---
Confidence 9422 2232221 11122 1232 3468998874 8899998 33 3455444432111111111
Q ss_pred CHHHHHHH----------HHHHHHH--hcCChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcc
Q 015230 287 NPLAMTAG----------IHTLKRL--KEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 354 (411)
Q Consensus 287 ~~~~~a~~----------~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 354 (411)
...++.. -...+.. +.+.+.+.++++++.+.+.++.+ ..+......|.|+.|.-...+.+.+.
T Consensus 334 -V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~----~gi~cn~~qGAMY~fP~i~lP~kaie 408 (475)
T KOG0258|consen 334 -VSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL----EGISCNPVQGAMYLFPQISLPPKAIE 408 (475)
T ss_pred -ccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc----CceeeccCccceeecccccCCHHHHH
Confidence 1111110 0111111 22566677888888888888776 55555566688877754332222221
Q ss_pred hhcccchHHHHHHHHHHHHc-CeEeccCC
Q 015230 355 DAKKSETTKFARFYRGMLEE-GVYFAPSQ 382 (411)
Q Consensus 355 ~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~ 382 (411)
.+..-...--...+..|++. ||.+.||+
T Consensus 409 ~A~~~~~~PD~FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 409 AAKALGIAPDEFYCLKLLEATGICVVPGS 437 (475)
T ss_pred HHHHhCCCCcHHHHHHHHHhcCeEEecCC
Confidence 11110000013455566555 99999984
No 343
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.52 E-value=2e-13 Score=113.60 Aligned_cols=163 Identities=26% Similarity=0.231 Sum_probs=108.6
Q ss_pred HHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCC
Q 015230 79 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 157 (411)
Q Consensus 79 ~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (411)
+++.+++++.++ +.+++++++||++|+..+++.+. ..++.+++..+.|++.........|..+..++........
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-- 78 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGG-- 78 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC--CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccc--
Confidence 456666777764 67789999999999999998542 2367899999999887633333444444333222111110
Q ss_pred CCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 158 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 158 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
.+.+.+++... ..+++++++++.++++|...+ +++|.++|+++|+++|+|++|.++ .....
T Consensus 79 ----------~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-- 140 (170)
T cd01494 79 ----------LDVAILEELKA--KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG-- 140 (170)
T ss_pred ----------hhhhhhhhccc--cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--
Confidence 02223433322 357899999999988898888 899999999999999999999866 33221
Q ss_pred ccccCCCcchh--hhhhhccCCcccccccc
Q 015230 237 QEYFGVTPDLT--TLGKIIGGGLPVGAYGG 264 (411)
Q Consensus 237 ~~~~~~~~d~~--~~sK~~~~G~~~g~~~~ 264 (411)
.+.....+|++ +++|++++ .+.|++++
T Consensus 141 ~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~ 169 (170)
T cd01494 141 VLIPEGGADVVTFSLHKNLGG-EGGGVVIV 169 (170)
T ss_pred cccccccCCEEEEEcccccCC-CceEEEEe
Confidence 11222346766 45599986 56888765
No 344
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.51 E-value=1.1e-11 Score=115.18 Aligned_cols=347 Identities=12% Similarity=0.042 Sum_probs=177.7
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHH-HHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAA-LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a-~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~ 112 (411)
....|+|+.+-.++ +.+.++ +.++..-...|.+. ....++.+.+++.+ +.+++++++||+.|+..+..
T Consensus 36 ~~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~yag~-~s~~~lE~~va~~~-G~~~av~v~sGT~Al~ll~~-- 104 (450)
T TIGR02618 36 SEDVYIDLLTDSGT-------NAMSDKQWAGLMMGDEAYAGS-RNFYHLERTVRELY-GFKYVVPTHQGRGAENLLSQ-- 104 (450)
T ss_pred cCceEEEcccCCCc-------HHHHHHHHHHhhhcchhhcCC-CcHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHH--
Confidence 45678999987543 455555 43333222233322 22344555555555 78899999999999887532
Q ss_pred HhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC-CHHHHHHHHHcC-CCcEEEEEEc
Q 015230 113 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENN-KGEIAAIILE 190 (411)
Q Consensus 113 ~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~l~~~~~~~-~~~~~~vi~~ 190 (411)
...++++++ .++.|...+.......|..+.-+..+...+.. .. .. ...+ |++++++.++.. ..+++.+.++
T Consensus 105 -l~l~pGDeV-psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~-~~--~p--~~GniD~~~Le~aI~~~~~~~~~lV~~e 177 (450)
T TIGR02618 105 -IAIKPGDYV-PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQ-LN--IP--FKGNVDLKKLQKLIDEVGADKIPYICLA 177 (450)
T ss_pred -hCCCCcCEE-CCceeHHHHHHHHHhCCeEEEeeecccccccc-cC--CC--CCCCcCHHHHHHHhccccCcccCceEEE
Confidence 333344443 44444444443344444411111111000000 00 00 0001 899999999853 2234455555
Q ss_pred ccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc----c-c--cccCccccccC------CCcchhhhhhhcc-CC
Q 015230 191 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG----F-R--LAYGGAQEYFG------VTPDLTTLGKIIG-GG 256 (411)
Q Consensus 191 ~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g----~-~--~g~~~~~~~~~------~~~d~~~~sK~~~-~G 256 (411)
-.++..|..+.+.+.+++|.++|++||++||.|.++.- | + .........+. -..|. +++|+.- +|
T Consensus 178 ~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~-~~~S~~Kd~~ 256 (450)
T TIGR02618 178 VTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADG-CTMSGKKDCL 256 (450)
T ss_pred EecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcE-EEEeeccCCC
Confidence 44444433444444599999999999999999999961 1 1 01100000000 01233 3444442 34
Q ss_pred ccccccc--ccHHHHHHhcCCCCcccc-cCCCC-CHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 257 LPVGAYG--GRRDIMEMVAPAGPMYQA-GTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 257 ~~~g~~~--~~~~~~~~~~~~~~~~~~-~t~~~-~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
.|+|.++ .++++++..+.....+-+ .+.++ ..-.+.+...+++...++...++..+..+++.+.|++. ++..
T Consensus 257 ~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~----Gvpv 332 (450)
T TIGR02618 257 VNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA----GVPI 332 (450)
T ss_pred CCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC----CCcc
Confidence 4777664 477888877643222211 12222 11122222333443333455566666788888888877 4433
Q ss_pred EEeeecceEEEEEecC--CCCCcchhcccchHHHHHHHHHHH-HcCeEeccC------CC-----------cceee--e-
Q 015230 333 CGGYISGMFGFFFTEG--PVYNFEDAKKSETTKFARFYRGML-EEGVYFAPS------QF-----------EAGFT--S- 389 (411)
Q Consensus 333 ~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~------~~-----------~~~~~--~- 389 (411)
..+..|..++++.... .++. ..=-+..++-.|. +-||-..-- .. -.+|+ |
T Consensus 333 ~~p~ggh~V~vda~~~lph~~~-------~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr 405 (450)
T TIGR02618 333 VEPVGGHAVFLDARRFLPHIPQ-------DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPR 405 (450)
T ss_pred cCCCCcceEEEEhHHhCCCCCh-------hhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecccc
Confidence 2345678888887552 1111 1112345555554 446643221 11 11454 3
Q ss_pred cCCCHHHHHHHHHHHHHHHHh
Q 015230 390 LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 390 ~~~t~~~i~~~i~~l~~~~~~ 410 (411)
-.-|.+++|...++|..+.++
T Consensus 406 r~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 406 RVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred ccccHhHHHHHHHHHHHHHhh
Confidence 455889999999999887653
No 345
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.49 E-value=3.1e-12 Score=121.30 Aligned_cols=159 Identities=17% Similarity=0.135 Sum_probs=103.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.+..+.+.+.+++..+. +..++++||+.|+.+++... ..++++||+....|.+...........
T Consensus 68 ~pt~~~le~~la~l~g~-~~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~l~~------------- 131 (437)
T PRK05613 68 NPTVEALENRIASLEGG-VHAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVTLNR------------- 131 (437)
T ss_pred ChHHHHHHHHHHHHhCC-CeEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHHHHh-------------
Confidence 45567888888888754 56777777889998887642 356678888877777653221111100
Q ss_pred CCCCCCceeecC-CCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccccccc
Q 015230 155 PKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233 (411)
Q Consensus 155 ~~~~~~~~~~~~-~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~ 233 (411)
.+..+..++ ..|++++++.++ +++++|+++...|+.|.+.+ +++|.++|+++|+++|+|.+++ .|.
T Consensus 132 ---~Gi~v~~vd~~~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a---~g~ 198 (437)
T PRK05613 132 ---LGIEVTFVENPDDPESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIA---TAA 198 (437)
T ss_pred ---cCeEEEEECCCCCHHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCc---ccc
Confidence 111233332 237888888886 35677888877777778888 9999999999999999999996 221
Q ss_pred CccccccCCCcchhhhhhhccC-Ccccccc
Q 015230 234 GGAQEYFGVTPDLTTLGKIIGG-GLPVGAY 262 (411)
Q Consensus 234 ~~~~~~~~~~~d~~~~sK~~~~-G~~~g~~ 262 (411)
......+|.+.-+.|+.|.++| |--+|.+
T Consensus 199 ~~~p~~~GaDivv~S~~K~l~G~gd~~gG~ 228 (437)
T PRK05613 199 LVRPLELGADVVVASLTKFYTGNGSGLGGV 228 (437)
T ss_pred ccChHHhCCCEEEeeccceecCCCcceeEE
Confidence 1111123443334477899986 4444544
No 346
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.47 E-value=3.1e-12 Score=117.46 Aligned_cols=283 Identities=17% Similarity=0.134 Sum_probs=175.2
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
+.-...+.+.++++. +.++.+.++||..|+..++.. ....+++|++....|.+.+........+
T Consensus 62 nPT~~~lE~~~a~LE-g~~~~~afsSGmaAI~~~~l~--ll~~GD~vl~~~~~YG~t~~~~~~~l~~------------- 125 (396)
T COG0626 62 NPTRDALEEALAELE-GGEDAFAFSSGMAAISTALLA--LLKAGDHVLLPDDLYGGTYRLFEKILQK------------- 125 (396)
T ss_pred CccHHHHHHHHHHhh-CCCcEEEecCcHHHHHHHHHH--hcCCCCEEEecCCccchHHHHHHHHHHh-------------
Confidence 344566666666665 777888888999999998753 3345788888888887755443322211
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
.+.++..+...+.+.+++.+.. +++++|++|++.|+.-.+.+ +.+|+++|+++|+++|+|.+.+ .+
T Consensus 126 ---~gi~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfa-----tP 191 (396)
T COG0626 126 ---FGVEVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFA-----TP 191 (396)
T ss_pred ---cCeEEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCcc-----cc
Confidence 2234444444455566666652 47999999999988888888 9999999999999999999997 22
Q ss_pred ccccccCCCcchh--hhhhhccCC--cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 235 GAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 235 ~~~~~~~~~~d~~--~~sK~~~~G--~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
..++.+.+..|++ |.+|.++|. .-.|.+++ ++++.+.+... .....-....|..+...+..++-+ .-..++
T Consensus 192 ~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~--~~~~~G~~l~p~dA~l~lRGlkTL--~~Rm~~ 267 (396)
T COG0626 192 VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA--QRANTGAVLSPFDAWLLLRGLRTL--ALRMER 267 (396)
T ss_pred cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH--HHhhcCCCCCHHHHHHHHhccchH--HHHHHH
Confidence 3334444445655 789999984 44665554 44555554210 011112344556555555555433 333456
Q ss_pred HHHHHHHHHHHHHHHHHhcCCce------------------EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHH
Q 015230 310 LNKITGELTQGIIDAGKKAGHAI------------------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 371 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~------------------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 371 (411)
..+++..+.+.|++. |.+. ...+.|.++.|++.+ +.++.++.+.|
T Consensus 268 ~~~nA~~IA~~L~~~----p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~-------------~~~~~~f~~~L 330 (396)
T COG0626 268 HNENALKIAEFLADH----PKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN-------------EEAAKKFLDSL 330 (396)
T ss_pred HHHHHHHHHHHHhcC----CCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC-------------hHHHHHHHHhC
Confidence 666666666766663 2211 122478899999953 14456666666
Q ss_pred HHcCeEeccCCCcc---------------------------eeeecCCCHHHHHHHHHHHHHHHHh
Q 015230 372 LEEGVYFAPSQFEA---------------------------GFTSLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 372 ~~~Gi~v~~~~~~~---------------------------~~~~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+--.+-.+-|+... +|++. --|+++.+++-|+++++.
T Consensus 331 ~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSV--GlEd~eDLi~Dl~~Al~~ 394 (396)
T COG0626 331 KLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSV--GLEDVEDLIADLEQALAK 394 (396)
T ss_pred CccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEe--cCCCHHHHHHHHHHHHHh
Confidence 65444444443211 34432 235667777777777764
No 347
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.47 E-value=5.5e-12 Score=114.29 Aligned_cols=210 Identities=14% Similarity=0.109 Sum_probs=137.1
Q ss_pred HHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCC
Q 015230 78 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 157 (411)
Q Consensus 78 ~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (411)
+..+.+.+++.. +..+++..+||..|+..++..+ .+.++++++.+..|.|.......... .
T Consensus 79 ~~~le~~iaal~-ga~~~l~fsSGmaA~~~al~~L--~~~g~~iV~~~~~Y~gT~~~l~~~~~----------------~ 139 (409)
T KOG0053|consen 79 RDVLESGIAALE-GAAHALLFSSGMAAITVALLHL--LPAGDHIVATGDVYGGTLRILRKFLP----------------K 139 (409)
T ss_pred hHHHHHHHHHHh-CCceEEEecccHHHHHHHHHHh--cCCCCcEEEeCCCcccHHHHHHHHHH----------------H
Confidence 455555555555 6666888889999999999753 35678889998888875433211111 1
Q ss_pred CCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccc
Q 015230 158 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQ 237 (411)
Q Consensus 158 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~ 237 (411)
.+.....+..+|+++++++++ +++.+|++|.+.|+...+.+ +++|+++|+++|+++|+|++.++ +...
T Consensus 140 ~gie~~~vd~~~~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~-----p~~~ 207 (409)
T KOG0053|consen 140 FGGEGDFVDVDDLKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGS-----PYNQ 207 (409)
T ss_pred hCceeeeechhhHHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCc-----cccc
Confidence 222334443345666666665 47999999999998888888 99999999999999999999973 2344
Q ss_pred cccCCCcchh--hhhhhccCC--ccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 238 EYFGVTPDLT--TLGKIIGGG--LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 238 ~~~~~~~d~~--~~sK~~~~G--~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
+.+.+..|++ |.+|.++|. .-.|.++.+ +++...+.... ..--+..+|+.+.-....++.+. -..++..+
T Consensus 208 ~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~---~~lg~~~~p~~~~ll~Rglktl~--lRi~~~~e 282 (409)
T KOG0053|consen 208 DPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ---EDLGWCEDPFDLFLLSRGLKTLH--LRINKHSE 282 (409)
T ss_pred ChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH---HHhcCCCCHHHHHHHhcCcchhh--hhHHHHHH
Confidence 4455556766 688999974 446666775 77777665211 22345667777777665554332 11233344
Q ss_pred HHHHHHHHHHH
Q 015230 313 ITGELTQGIID 323 (411)
Q Consensus 313 ~~~~~~~~l~~ 323 (411)
++..+.+.|++
T Consensus 283 na~~~A~~Le~ 293 (409)
T KOG0053|consen 283 NALKIALLLEA 293 (409)
T ss_pred HHHHHHHHhhh
Confidence 44444444444
No 348
>PLN02271 serine hydroxymethyltransferase
Probab=99.46 E-value=3.4e-11 Score=114.09 Aligned_cols=286 Identities=16% Similarity=0.067 Sum_probs=162.7
Q ss_pred CHHHHHHHHHHHhhCC-CC----CEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh--------cCC
Q 015230 75 CLLENVLAEMVISAVP-SI----EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK--------AGS 141 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~-~~----~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~g~ 141 (411)
++.+....++..+.++ .. -+ +...||+.|+.+++... ..+++.|+..+..+-|+..-.... .|.
T Consensus 193 D~iE~la~era~~lF~~~~~~~gaN-VQp~SGs~AN~aV~~AL--l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~ 269 (586)
T PLN02271 193 DQIERLCCERALAAFGLDSEKWGVN-VQPYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI 269 (586)
T ss_pred HHHHHHHHHHHHHHhCCcccccccc-eeeccHHHHHHHHHHHh--cCCCCEEEEecCCCCCchhcccccccccccccccc
Confidence 3444444555556664 22 22 33448999999999643 567788999888777664432111 111
Q ss_pred CCcccCCCC--CCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 015230 142 GVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 219 (411)
Q Consensus 142 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~ 219 (411)
.+..+++.. ..+.. |++++++.... .++++|++...... ...+ +++++++|+++|++
T Consensus 270 ~~~~vpY~~d~~~g~I-------------Dyd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~ 328 (586)
T PLN02271 270 FFESLPYKVNPQTGYI-------------DYDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAV 328 (586)
T ss_pred eEEEEEcccccccCcc-------------CHHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCE
Confidence 111111110 11111 89999986553 47888888663333 3345 99999999999999
Q ss_pred EEEecccc-cc-ccccC-ccccccCCCcchh--hhhhhccCCccc-ccccccHH--------------------HHHHhc
Q 015230 220 LIFDEVMT-GF-RLAYG-GAQEYFGVTPDLT--TLGKIIGGGLPV-GAYGGRRD--------------------IMEMVA 273 (411)
Q Consensus 220 li~De~~~-g~-~~g~~-~~~~~~~~~~d~~--~~sK~~~~G~~~-g~~~~~~~--------------------~~~~~~ 273 (411)
+++|-+|. |+ ..+.. ..++ ..|++ |..|++.| |- |.+..+++ +.+.+.
T Consensus 329 LmvD~AH~aGLIa~g~~~sP~~----~aDvvt~TTHKtLrG--PrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~ 402 (586)
T PLN02271 329 LMCDMAHISGLVAAKECVNPFD----YCDIVTSTTHKSLRG--PRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKIN 402 (586)
T ss_pred EEEECcccccccccCcCCCCCc----CCcEEEeCCcccCCC--CCceEEEecccccccccCCccccccccccHHHHHHhh
Confidence 99999996 66 33311 1111 24655 56799976 43 44454542 334443
Q ss_pred CC-CCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEee-ecceEEEEEecC
Q 015230 274 PA-GPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFFTEG 348 (411)
Q Consensus 274 ~~-~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 348 (411)
.. .+.+.+++.... .++...+++.... ++..+++.++.+.+.+.|.+. ++.....+ ...++++++...
T Consensus 403 ~aVfPglqgGphn~~---IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~----G~~vv~ggTdnHlvLvDl~~~ 475 (586)
T PLN02271 403 FAVFPSLQGGPHNNH---IAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR----KCRLVTGGTDNHLLLWDLTTL 475 (586)
T ss_pred cccCCccccChhHHH---HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC----CCeEeeCCCCcceeeecCccc
Confidence 21 123333332222 2333333443332 556777888888888888776 33221111 245778877432
Q ss_pred CCCCcchhcccchHHHHHHHHHHHHcCeEeccCC---------Ccceee------ecCCCHHHHHHHHHHHHHHHH
Q 015230 349 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFT------SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------~~~~~~------~~~~t~~~i~~~i~~l~~~~~ 409 (411)
. .+.....+.|.+-||.+.... ...+|+ .....+++++++.+.|.++++
T Consensus 476 g------------~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 476 G------------LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred C------------CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 2 122566677777799885431 123666 245567888888777777654
No 349
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.46 E-value=7.1e-11 Score=110.15 Aligned_cols=343 Identities=14% Similarity=0.066 Sum_probs=174.9
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCCC---CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGA---PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVL 109 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~~---~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al 109 (411)
....++|+.+-.++ +.+.++...++..+. .|.. ..++++++++.+ +.++++++++|+.|+..++
T Consensus 43 ~~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~vAe~l-----G~e~aV~v~sGTaAl~ll~ 110 (460)
T PRK13237 43 SEDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEAYAGSRNFYHLEETVQEYY-----GFKHVVPTHQGRGAENLLS 110 (460)
T ss_pred cCcEEEECcccCCc-------hhccHHHHHHHhhcchhhcCCCcHHHHHHHHHHHH-----CCCeEEEeCCHHHHHHHHH
Confidence 45678999988554 223333223333322 2332 234445555555 7788999999999999864
Q ss_pred HHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC-CCCCCCceeecCCC-CHHHHHHHHHcC-CCcEEE
Q 015230 110 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV-PKGATYETLTAPFN-DVSALENLFENN-KGEIAA 186 (411)
Q Consensus 110 ~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-d~~~l~~~~~~~-~~~~~~ 186 (411)
.+ . .++++++ ..+.+...+.......|. ........... +.. ......+ |++.+++.++.. ..+++.
T Consensus 111 ~l--~-v~pGd~V-p~n~~f~Tt~ahI~~~Ga--~fvDi~~d~a~~~~~----~~p~tgnlD~d~Le~~I~~~~~~~~~l 180 (460)
T PRK13237 111 RI--A-IKPGQYV-PGNMYFTTTRYHQELNGG--IFVDIIIDEAHDAQS----DHPFKGNVDLDKLQALIDEVGAENIAY 180 (460)
T ss_pred Hh--C-CCCcCEE-CCccchHhhHHHHHhCCc--EEEeeeccccccccc----CCCCCCCcCHHHHHHHhccccCCccCc
Confidence 42 2 3334443 333333333332333333 11111000000 000 0000111 899999999853 234444
Q ss_pred EEEc-ccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-c---c-cc--ccCcccc------ccCCCcchh--hhh
Q 015230 187 IILE-PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G---F-RL--AYGGAQE------YFGVTPDLT--TLG 250 (411)
Q Consensus 187 vi~~-~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g---~-~~--g~~~~~~------~~~~~~d~~--~~s 250 (411)
+.++ ++|..||.. .+.+.+++|.++|++||+.||.|.++. | | +. ....... ...-.-|++ |+.
T Consensus 181 V~a~itvn~~GGqp-vs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~ 259 (460)
T PRK13237 181 ICLAVTVNLAGGQP-VSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGK 259 (460)
T ss_pred eEEEEecccCCCee-CCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCC
Confidence 4443 444444543 333449999999999999999999996 3 2 11 1110000 001123544 555
Q ss_pred hhccCCccc-ccccc-cHHHHHHhcCCCCcccc-cCCCCC-HHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Q 015230 251 KIIGGGLPV-GAYGG-RRDIMEMVAPAGPMYQA-GTLSGN-PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 326 (411)
Q Consensus 251 K~~~~G~~~-g~~~~-~~~~~~~~~~~~~~~~~-~t~~~~-~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 326 (411)
|.+.. ++ |+++. ++++++.++.....+-+ .|+++- .--+.+....++...+++..++.-+..+++.+.|++.
T Consensus 260 K~~~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~-- 335 (460)
T PRK13237 260 KDCLV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA-- 335 (460)
T ss_pred CCCCC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC--
Confidence 76664 55 45544 67778877643222212 233332 1122222223333333455566666777888887765
Q ss_pred hcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEecc------CC-----C------cceee
Q 015230 327 KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAP------SQ-----F------EAGFT 388 (411)
Q Consensus 327 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~------~~-----~------~~~~~ 388 (411)
+++...+..|.-++++.... .+.+. ...=-+..++-.|. +-||-..- +. . -.+|+
T Consensus 336 --Gvpv~~p~ggH~v~vda~~~-lph~~----~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rl 408 (460)
T PRK13237 336 --GVPIVEPVGGHAVFLDARRF-LPHLP----QDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRL 408 (460)
T ss_pred --CCceecCCCceEEEEEhHHh-CCCCC----cccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeee
Confidence 55444455677778876441 01111 11112345555554 44664421 11 0 11454
Q ss_pred --e-cCCCHHHHHHHHHHHHHHHHh
Q 015230 389 --S-LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 389 --~-~~~t~~~i~~~i~~l~~~~~~ 410 (411)
| -.-|.+++|...++|..+.++
T Consensus 409 aiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 409 TIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccccccccHHHHHHHHHHHHHHHHh
Confidence 3 455889999999999877653
No 350
>PLN02452 phosphoserine transaminase
Probab=99.44 E-value=3.3e-11 Score=111.63 Aligned_cols=320 Identities=10% Similarity=-0.008 Sum_probs=191.0
Q ss_pred EEeccCCccccccCCCcHHHHHHHHHHHHcCCC-------CCCC----CHHHHHHHHHHHhhCCC---CCEEEEeCChHH
Q 015230 38 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTS-------FGAP----CLLENVLAEMVISAVPS---IEMVRFVNSGTE 103 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~-------~~~~----~~~~~~l~~~l~~~~~~---~~~v~~~~~g~~ 103 (411)
.+.|..+ |.. .+++|++++.+.+-+... .+.. .+...++.+.|.+.++- .+-+++..||+.
T Consensus 8 ~~~f~pG----P~~-lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~ 82 (365)
T PLN02452 8 VFNFSAG----PAT-LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAST 82 (365)
T ss_pred eEeeeCC----CCC-CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHH
Confidence 4555554 322 688999999887654211 1111 34556677777777752 234556678999
Q ss_pred HHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhh-cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 104 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 104 a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
++++++.-+ ..+++++++...+..|....-.+. .|. ............. . ..+++++ +. ..
T Consensus 83 ~~ea~~~nl--~~~~~~~l~~~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~--------~--~~~~~~~----~~-~~ 144 (365)
T PLN02452 83 QFAAIPLNL--CKPGDKADFVVTGSWSKKAAKEAKKYCK-TNVIASGKDEKYT--------K--IPSVSEW----EL-TP 144 (365)
T ss_pred HHHHHHHhc--CCCCCeEEEEECCHHHHHHHHHHHHhCC-CcEEEecCCCCCC--------C--CCChHHc----CC-CC
Confidence 999988742 235567777777766644333322 232 2211111011100 0 0144443 22 23
Q ss_pred cEEEEEEcccCCCCCc-cCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhccC-Ccccc
Q 015230 183 EIAAIILEPVVGNSGF-IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGG-GLPVG 260 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~-~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~~-G~~~g 260 (411)
+...+.+.++...+|+ +.+ ++++. ++++|+|-+++ + .+....++.+++ |+.+..|.++. | +|
T Consensus 145 ~~~~v~~~hnETstGv~~~~----~~~i~------~~~lvVDa~Ss-~-g~~pidv~~~~v--~~~saqK~lGP~G--l~ 208 (365)
T PLN02452 145 DAKFVHICANETIHGVEFKD----YPDVG------NVPLVADMSSN-F-LSKPVDVSKYGV--IYAGAQKNVGPSG--VT 208 (365)
T ss_pred CCcEEEECCCCCCCcEecCc----ccccC------CCeEEEECCcc-c-cCcccCHHHcCE--EEEecccccCCCC--eE
Confidence 5778888888888898 465 55553 38999999996 1 123333444544 67788999962 3 78
Q ss_pred cccccHHHHHHhcCCCCccc--------ccC-CCCCHHHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHh
Q 015230 261 AYGGRRDIMEMVAPAGPMYQ--------AGT-LSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKK 327 (411)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~--------~~t-~~~~~~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~ 327 (411)
.++.++++++......+.+. .++ ++++..+..+..++++.+.+ +++.++.+++.+++++.|++...-
T Consensus 209 ~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~ 288 (365)
T PLN02452 209 IVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF 288 (365)
T ss_pred EEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 88999999877653222111 112 36667777777788887765 356667777777777777764100
Q ss_pred cCCceEEe-eecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceeee--cCCCHHHHHHHHH
Q 015230 328 AGHAICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFTS--LAHSSDDIQHTIT 402 (411)
Q Consensus 328 ~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~~--~~~t~~~i~~~i~ 402 (411)
+....+.. .....+.|.+.+ ....+++.+.++++|++..+|.. ..+|++ -.++.++++++++
T Consensus 289 y~~~~~~~~rs~~~vsF~~~~-------------~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~ 355 (365)
T PLN02452 289 YVCPVEKSVRSLMNVPFTLGG-------------SELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVA 355 (365)
T ss_pred ccCCCChHHhCCeEEEEEcCC-------------chhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHH
Confidence 11111111 223455555532 23458999999999999988741 236774 4668999999999
Q ss_pred HHHHHHH
Q 015230 403 AAEKVLR 409 (411)
Q Consensus 403 ~l~~~~~ 409 (411)
.+++.-+
T Consensus 356 ~m~~f~~ 362 (365)
T PLN02452 356 FMKDFQA 362 (365)
T ss_pred HHHHHHH
Confidence 9988754
No 351
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.43 E-value=1.8e-11 Score=108.69 Aligned_cols=278 Identities=16% Similarity=0.120 Sum_probs=170.3
Q ss_pred EEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 95 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 95 v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
.+.|.|||.|+..+-.......+...|-+.+|++. ++.......|..+...++-+...-.. |.+.+-
T Consensus 97 t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~-NH~~If~~aGl~v~~Y~Yyd~~~~~~------------df~~ml 163 (396)
T COG1448 97 TVQTLGGTGALRVAADFLARFFPDATVWISDPTWP-NHKAIFEAAGLEVETYPYYDAETKGL------------DFDGML 163 (396)
T ss_pred heecCCcchHHHHHHHHHHHhCCCceEEeCCCCcH-hHHHHHHhcCCceeeeeccccccccc------------cHHHHH
Confidence 37889999999998877666667777888888886 55566666676665544322221100 888888
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc---cCcccccc-CCCcc-h--h
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA---YGGAQEYF-GVTPD-L--T 247 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g---~~~~~~~~-~~~~d-~--~ 247 (411)
..+++.+.....++-.+-+|++| +.++.+.+++|.++.++.+.+.++|=+|=||..| ...+...+ ...+. + .
T Consensus 164 a~L~~a~~~~vvLLH~CcHNPTG-~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~ 242 (396)
T COG1448 164 ADLKTAPEGSVVLLHGCCHNPTG-IDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVAS 242 (396)
T ss_pred HHHHhCCCCCEEEEecCCCCCCC-CCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEe
Confidence 88887655544444444555555 5567778999999999999999999999888222 11111111 11222 2 2
Q ss_pred hhhhhccC-Ccccccc-c--ccHHHHHHhcCCCCcccccCCCC-CHHHHHHHHHHHH------HHhc--CChHHHHHHHH
Q 015230 248 TLGKIIGG-GLPVGAY-G--GRRDIMEMVAPAGPMYQAGTLSG-NPLAMTAGIHTLK------RLKE--PGTYEYLNKIT 314 (411)
Q Consensus 248 ~~sK~~~~-G~~~g~~-~--~~~~~~~~~~~~~~~~~~~t~~~-~~~~~a~~~~~l~------~~~~--~~~~~~~~~~~ 314 (411)
|+||.|+= |-|+|++ + -+++..+.+...-....=++++. +...+.+....|+ .++. +.+++++.+++
T Consensus 243 S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR 322 (396)
T COG1448 243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMR 322 (396)
T ss_pred hhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999984 8899976 2 24444444431100001112222 2233333332222 2222 67777888888
Q ss_pred HHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeee-cCCC
Q 015230 315 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS-LAHS 393 (411)
Q Consensus 315 ~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~-~~~t 393 (411)
+.+.+.|++......+.......|+|...-+. .+++.+...+.||++..++ |++ ...+
T Consensus 323 ~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls-----------------~~QV~rLree~~IY~v~sG----Ri~vaGl~ 381 (396)
T COG1448 323 QALVDALKALGAPRNFDFIISQRGMFSYTGLS-----------------PEQVDRLREEFGIYLVASG----RINVAGLN 381 (396)
T ss_pred HHHHHHHHhhCCCcccchHhhcCceeecCCCC-----------------HHHHHHHHHhccEEEecCC----eeeeccCC
Confidence 88888887754432333334556666444221 1455555566699998876 664 4668
Q ss_pred HHHHHHHHHHHHHH
Q 015230 394 SDDIQHTITAAEKV 407 (411)
Q Consensus 394 ~~~i~~~i~~l~~~ 407 (411)
+.+++.+.+.+.++
T Consensus 382 ~~ni~~va~ai~~v 395 (396)
T COG1448 382 TSNIDYVAKAIAAV 395 (396)
T ss_pred hhhHHHHHHHHHhh
Confidence 89999999998875
No 352
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.41 E-value=2.6e-11 Score=113.07 Aligned_cols=229 Identities=17% Similarity=0.156 Sum_probs=138.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
....+++.+.+++.. +.+.++.++||+.|+.+++... ..+++.||+....|.+.+........
T Consensus 63 ~P~~~~lE~~la~le-g~~~av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~~~-------------- 125 (384)
T PRK06434 63 NPTVQAFEEKYAVLE-NAEHALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKVLK-------------- 125 (384)
T ss_pred ChhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHHHH--------------
Confidence 455677788887777 4567889999999999999743 45677888876666554433211110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 234 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~ 234 (411)
..+..+..++.++.+.++ ++ ++++++|++|...|+++.+.+ +++|.++|++++ +++|.+++. .
T Consensus 126 --~~Gi~v~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s-----~ 188 (384)
T PRK06434 126 --TLGIHVDYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS-----P 188 (384)
T ss_pred --hcCcEEEEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-----c
Confidence 011223333332333332 22 346889999998888888877 999999999998 466999851 1
Q ss_pred ccccccCCCcchh--hhhhhccC-C-cccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHH
Q 015230 235 GAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 309 (411)
Q Consensus 235 ~~~~~~~~~~d~~--~~sK~~~~-G-~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~ 309 (411)
......+...|++ |.+|.++| | .-.|.++. ++++.+.+.... .......+++.++.+...++.+ +...++
T Consensus 189 ~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~---~~~G~~~~~~~A~l~~~gL~tL--~~R~~r 263 (384)
T PRK06434 189 YNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR---KTLGSNPDPIQAYLALRGLKTL--GLRMEK 263 (384)
T ss_pred ccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH---HhcCCCCCHHHHHHHHhCCCcH--HHHHHH
Confidence 1112223345654 66799986 4 33455555 455555544211 1112334666666655554433 445667
Q ss_pred HHHHHHHHHHHHHHHHHhcCCce------------EEeeecceEEEEEe
Q 015230 310 LNKITGELTQGIIDAGKKAGHAI------------CGGYISGMFGFFFT 346 (411)
Q Consensus 310 ~~~~~~~~~~~l~~~~~~~~~~~------------~~~~~g~~~~~~~~ 346 (411)
.+++...+.+.|+.. |.+. ...+.|.++.|++.
T Consensus 264 ~~~~a~~~a~~L~~~----p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 264 HNKNGMELARFLRDS----KKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHHHHHHHHcC----CCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 777777777777764 3221 12356889999884
No 353
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.40 E-value=4.1e-11 Score=113.72 Aligned_cols=269 Identities=19% Similarity=0.136 Sum_probs=170.7
Q ss_pred CcHHHHHHHHHHHHcCC----CCCCCCHHHHHHHHHHHhhCCC--CCEEEEeCChHHHHHHHHHHHHhccC---------
Q 015230 53 ADDQVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTG--------- 117 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~----~~~~~~~~~~~l~~~l~~~~~~--~~~v~~~~~g~~a~~~al~~~~~~~~--------- 117 (411)
.++...+++...+.... .+......++++..++++.++. .-.-.||.|||||+..++.+++....
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 56677777777777732 2334577789999999999973 34568999999999999988764321
Q ss_pred --CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCC
Q 015230 118 --RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 195 (411)
Q Consensus 118 --~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~ 195 (411)
+...|+.+...|....-++...|-+....+........ |++++++++++..... +|+.......
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~i-------------d~~~l~~~i~~~t~~g-~vV~~aGtT~ 219 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRI-------------DVDALEEAIDENTIGG-VVVGTAGTTD 219 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCcccc-------------CHHHHHHHHHhhccCc-eEEEEecCCC
Confidence 12257777888888888888888766664443221111 8999999999642111 3666677777
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc-c-cCccccccCCC-cchh--hhhhhccCCcccccccccHH--
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-A-YGGAQEYFGVT-PDLT--TLGKIIGGGLPVGAYGGRRD-- 267 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~-g-~~~~~~~~~~~-~d~~--~~sK~~~~G~~~g~~~~~~~-- 267 (411)
.|.+-| +++|.++|++|++++++|.++.|+ .. . ....+ .+++. .|-+ .+-|....-.+.|++..+.+
T Consensus 220 ~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~ 294 (460)
T COG0076 220 TGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEA 294 (460)
T ss_pred CCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCCCCceEEEEECHHH
Confidence 888888 999999999999999999999988 32 1 11110 12332 3433 45687765556888877544
Q ss_pred HHHHhcCCCCccccc------CC--CCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcC-CceEEe
Q 015230 268 IMEMVAPAGPMYQAG------TL--SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG-HAICGG 335 (411)
Q Consensus 268 ~~~~~~~~~~~~~~~------t~--~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 335 (411)
+.+.+.. ...+..+ +. +.+....++....+..+.. .++.++..++.+++.+.|++. + +.....
T Consensus 295 l~~~~~~-~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~----~~~e~~~~ 369 (460)
T COG0076 295 LRRILIF-ADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL----GDFELVNE 369 (460)
T ss_pred hhhhhhc-ccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC----CCcEeecC
Confidence 3333331 1111110 11 1112233334444555532 566677778888888888876 3 222223
Q ss_pred eecceEEEEE
Q 015230 336 YISGMFGFFF 345 (411)
Q Consensus 336 ~~g~~~~~~~ 345 (411)
+....+.|.+
T Consensus 370 p~l~~V~fr~ 379 (460)
T COG0076 370 PELPIVAFRL 379 (460)
T ss_pred CccceEEEEc
Confidence 4556677766
No 354
>PRK15029 arginine decarboxylase; Provisional
Probab=99.39 E-value=3.3e-11 Score=119.78 Aligned_cols=312 Identities=8% Similarity=-0.021 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCC-CCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPG 153 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~ 153 (411)
+....+..+..++.++.....+.+||.|.++.+++.. ..++++.|.++...|-+...++.++|..+.++.-. ...+
T Consensus 204 ~G~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a---~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~G 280 (755)
T PRK15029 204 TGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA---CMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYG 280 (755)
T ss_pred CcHHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHH---hcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 4444555556666675555667777788888776663 33444455566677777777888888766554321 1222
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcE--------EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEI--------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 225 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~--------~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~ 225 (411)
++. .....+-+++.++++++++++.. ++++++|.+ .|...+ +++|.++|++++++|++||+
T Consensus 281 i~~-----~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEA 349 (755)
T PRK15029 281 IIG-----PIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_pred Ccc-----CCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEEECc
Confidence 211 00111114899999998876544 567776755 688888 99999999999999999999
Q ss_pred cccc-ccccCc----ccc--ccC-CCcc-hh--hhhhhccCCcc-ccccccc--------HHHHHHhcCCCCcccccCCC
Q 015230 226 MTGF-RLAYGG----AQE--YFG-VTPD-LT--TLGKIIGGGLP-VGAYGGR--------RDIMEMVAPAGPMYQAGTLS 285 (411)
Q Consensus 226 ~~g~-~~g~~~----~~~--~~~-~~~d-~~--~~sK~~~~G~~-~g~~~~~--------~~~~~~~~~~~~~~~~~t~~ 285 (411)
|.+. ...+.+ ++. ... ..+| ++ |.-|.+++ +. .+++-.+ +++.+.+. ...|.+
T Consensus 350 hGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~~l~------~~qSTS 422 (755)
T PRK15029 350 WYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQAYM------MHATTS 422 (755)
T ss_pred cccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHHHHH------HHcCCC
Confidence 9643 333322 221 001 3466 54 56687764 33 3344221 12222222 222444
Q ss_pred CCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhc------------CC--------------------
Q 015230 286 GNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA------------GH-------------------- 330 (411)
Q Consensus 286 ~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~------------~~-------------------- 330 (411)
++-+-++..-.+...++. +++.++..+....+++.++++..++ +.
T Consensus 423 PSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 502 (755)
T PRK15029 423 PLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKL 502 (755)
T ss_pred cHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhccccccccccccccccCccccccccccccccccccchhh
Confidence 555555554444444442 5667778888888888887763210 00
Q ss_pred ------ceEEee----ec------ceEEEEEecCCCC--Ccch--hcccchHHHHHHHHHHHHcCeEeccCCCcce-e-e
Q 015230 331 ------AICGGY----IS------GMFGFFFTEGPVY--NFED--AKKSETTKFARFYRGMLEEGVYFAPSQFEAG-F-T 388 (411)
Q Consensus 331 ------~~~~~~----~g------~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-~-~ 388 (411)
.+.... .| .+..++..+..+. .++. .....+.-+..+.+.|.++||.+--.....+ . +
T Consensus 503 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~lDp~Klti~~~~~g~sG~~~~~gip~~~l~~~L~~~gI~~E~~~~~~vL~l~ 582 (755)
T PRK15029 503 LTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLF 582 (755)
T ss_pred hccccceeeecccccccCcccccccccccCCceEEEEcCCCCCCCcccccCCcHHHHHHHHHHcCCEEEecCCCeEEEEe
Confidence 000000 00 0000111000000 0000 0000111234789999888999988765554 3 3
Q ss_pred ecCCCHHHHHHHHHHHHHH
Q 015230 389 SLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 389 ~~~~t~~~i~~~i~~l~~~ 407 (411)
+...|++++++++++|.++
T Consensus 583 s~g~t~~~~~~L~~aL~~~ 601 (755)
T PRK15029 583 SMGVTRGKWGTLVNTLCSF 601 (755)
T ss_pred CCCCCHHHHHHHHHHHHHH
Confidence 6788999999999999865
No 355
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.38 E-value=1.3e-12 Score=116.85 Aligned_cols=197 Identities=23% Similarity=0.177 Sum_probs=121.7
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCc
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 132 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~ 132 (411)
.+|++.+++.++. .+....+.++...++.+.+++.+ +.+..+|++||+.|+..+++... .+...||+...+ |-..
T Consensus 7 ~~~~m~~a~~~a~-~gd~~Yg~D~~~~~l~~~i~~l~-g~e~a~f~~sGT~An~~al~~~~--~~~~~vi~~~~a-Hi~~ 81 (290)
T PF01212_consen 7 PTPAMLEAMAAAN-VGDDAYGEDPTTARLEERIAELF-GKEAALFVPSGTMANQLALRAHL--RPGESVICADTA-HIHF 81 (290)
T ss_dssp S-HHEEHHHHHTT-SB-CCTTSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHHHH--HTTEEEEEETTE-HHHH
T ss_pred CCHHHHHHHHccc-cCCcccCCChhHHHHHHHHHHHc-CCCEEEEeCCCChHHHHHHHHHH--hcCCceeccccc-eeee
Confidence 6899999995543 33323345777788888888888 55677899999999999998542 345556665553 3221
Q ss_pred --hhh-hhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHc---CCCcEEEEEEcccCCCCCccCCCHHHH
Q 015230 133 --DPF-LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFL 206 (411)
Q Consensus 133 --~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l 206 (411)
..+ ....|..+..++.... +.. |++++++.++. |..++++|.++..++..|...++.+.+
T Consensus 82 ~E~ga~~~~~G~~~~~l~~~~~-G~l-------------~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el 147 (290)
T PF01212_consen 82 DETGAIEELSGAKLIPLPSDDD-GKL-------------TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL 147 (290)
T ss_dssp SSTTHHHHHTTCEEEEEBECTG-TBB--------------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred eccchhhHhcCcEEEECCCccc-CCC-------------CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence 122 2334443333222211 222 89999999987 345789999998887755566667779
Q ss_pred HHHHHHHHHhCCEEEEecccccc---ccccCccccccCCCcchh--hhhhhccCCcccccc-cccHHHHHHh
Q 015230 207 NAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDIMEMV 272 (411)
Q Consensus 207 ~~i~~l~~~~~~~li~De~~~g~---~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~-~~~~~~~~~~ 272 (411)
++|.++|++||++|+.|.+.-.- ..+.. ..+.. -..|++ +++|.++ .+.|.+ +++++.++..
T Consensus 148 ~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~-~~e~~-~~~D~v~~~~tK~~g--~~~Gavl~~~~~~i~~~ 215 (290)
T PF01212_consen 148 RAISELAREHGLPLHMDGARLANAAAALGVS-LAEIA-AGADSVSFGGTKNGG--APGGAVLAGNKEFIAKA 215 (290)
T ss_dssp HHHHHHHHHHT-EEEEEETTHHHHHCHHHHH-HHHHH-TTSSEEEEETTSTT---SSSEEEEEESHHHHHHH
T ss_pred HHHHHHHHhCceEEEEehhhHHHhhhccccc-HHHHh-hhCCEEEEEEEcccc--cccceEEEechHHHHHH
Confidence 99999999999999999886311 11111 11111 234555 5566555 377766 6788865443
No 356
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.38 E-value=1.7e-10 Score=103.76 Aligned_cols=296 Identities=17% Similarity=0.188 Sum_probs=186.9
Q ss_pred CHHHHHHHHHHHhhCCCCCEEE-EeCChHHHHHHHHHHHHhc-----cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVR-FVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 148 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~-~~~~g~~a~~~al~~~~~~-----~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~ 148 (411)
-+...+|.+||.++. +.|.|. .-++|+++=.+.|.+.++| ....+++..+.+.||.-.+.+++.|-.+..+.+
T Consensus 108 l~li~~Lq~~L~~IT-G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~ 186 (496)
T COG1003 108 LELIYELQEWLKEIT-GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKC 186 (496)
T ss_pred HHHHHHHHHHHHHhc-CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEec
Confidence 455678888888887 666665 4557888888877766665 224567777889999888888888887777666
Q ss_pred CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-
Q 015230 149 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT- 227 (411)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~- 227 (411)
.....+ |+++|++... ++++++++.-. |.-|.+.. + +.+|+++.+++|..|+.|.+-.
T Consensus 187 ~~~G~V--------------DlddLk~k~~---~~~AalMiTnP-sT~GvFE~--~-I~ei~~ivH~~Gg~vY~DGANlN 245 (496)
T COG1003 187 DENGNV--------------DLDDLRAKAE---DNLAALMITNP-STLGVFEE--D-IREICEIVHEAGGQVYYDGANLN 245 (496)
T ss_pred CCCCCc--------------cHHHHHHHhc---cceeEEEeccC-cccccchh--h-HHHHHHHHHHcCCEEEecCcchh
Confidence 544444 9999999887 57787777532 33465542 2 9999999999999999999873
Q ss_pred ---cc-ccccCccccccCCCcchh--hhhhhc----cCCcc-cccccccHHHHHHhcCC----CC------------ccc
Q 015230 228 ---GF-RLAYGGAQEYFGVTPDLT--TLGKII----GGGLP-VGAYGGRRDIMEMVAPA----GP------------MYQ 280 (411)
Q Consensus 228 ---g~-~~g~~~~~~~~~~~~d~~--~~sK~~----~~G~~-~g~~~~~~~~~~~~~~~----~~------------~~~ 280 (411)
|. |+|.++ .|++ -+-|+| |||-| +|-+.+.+.++..+..- .. ..-
T Consensus 246 A~vG~~rPGd~G--------~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~ 317 (496)
T COG1003 246 AIVGLARPGDMG--------FDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGV 317 (496)
T ss_pred hhhccccccccc--------cceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCcccee
Confidence 55 555432 2333 234555 44445 77777777666655420 00 001
Q ss_pred ccCCCCCHHHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhc
Q 015230 281 AGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAK 357 (411)
Q Consensus 281 ~~t~~~~~~~~a~~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 357 (411)
...+-++......+.+.+..+..+ +.-+...-+++|+..+|+.. +++... +.. .+.-++.-. .++ .+
T Consensus 318 ~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~---y~~~y~--~~~-~~~HE~ild-~r~---l~ 387 (496)
T COG1003 318 SAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY---YPVPYT--GEN-RVAHECILD-ARP---LK 387 (496)
T ss_pred eccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc---CccccC--CCC-cceeEEEee-chH---hH
Confidence 223344555555566666665543 33345666778888888763 333221 111 223332110 000 11
Q ss_pred ccchHHHHHHHHHHHHcCeEeccCCCcce-----ee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 358 KSETTKFARFYRGMLEEGVYFAPSQFEAG-----FT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 358 ~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~-----~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
...+.....+++.|.+.|+....-.++.+ -+ .-.-+++++|++++++.++.++
T Consensus 388 ~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 388 KETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred hhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 12334557899999999998776665532 22 2355789999999999887664
No 357
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.37 E-value=1.2e-09 Score=97.63 Aligned_cols=323 Identities=14% Similarity=0.118 Sum_probs=188.9
Q ss_pred EEEeccCCccccccCCCcHHHHHHHHHHHHcC-------CCC-C---CCCHHHHHHHHHHHhhCCCCCEE-EEeCChHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-------TSF-G---APCLLENVLAEMVISAVPSIEMV-RFVNSGTEA 104 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-------~~~-~---~~~~~~~~l~~~l~~~~~~~~~v-~~~~~g~~a 104 (411)
.-|.+++. =++.++.+++|....+.+- ..| + +.+..+....++..++++ .+.+ +.-.||++|
T Consensus 27 ~~ieLIAS-----EN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg-a~~anVQPhSGs~A 100 (413)
T COG0112 27 EHIELIAS-----ENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG-AEYANVQPHSGSQA 100 (413)
T ss_pred hceeeeec-----cccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC-CCccccCCCCchHH
Confidence 44666655 2246889999998888881 111 1 225555555566666775 3322 344589999
Q ss_pred HHHHHHHHHhccCCcEEEEEeCCcCCCchhh--hhhcCCCCcccCCCCC--CCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 105 CMGVLRLARAFTGRERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDS--PGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 105 ~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
+.+++.. ...+++.|+..+-+.-|+..-. ...+|.....++++.. .+.. |.|++++...++
T Consensus 101 N~av~~A--ll~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~I-------------DyD~~~k~a~e~ 165 (413)
T COG0112 101 NQAVYLA--LLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLI-------------DYDEVEKLAKEV 165 (413)
T ss_pred HHHHHHH--HcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCcc-------------CHHHHHHHHHHh
Confidence 9998874 3456778887777665544222 1222322122222111 1111 899999998875
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcchh--hhhhhccCC
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLT--TLGKIIGGG 256 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d~~--~~sK~~~~G 256 (411)
++++|++-. +...-..+ +++++++|++.|++|++|-+|. |+ -.|.+- +.... .|++ |.-|+|-|
T Consensus 166 --kPK~ii~G~--SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p--~P~~~-AdvVTtTTHKTlrG- 233 (413)
T COG0112 166 --KPKLIIAGG--SAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGVHP--NPLPH-ADVVTTTTHKTLRG- 233 (413)
T ss_pred --CCCEEEECc--cccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhcccCC--CCCCc-cceEeCCcccCCCC-
Confidence 677777732 22222334 9999999999999999999994 77 444321 11111 4555 56699985
Q ss_pred ccccccccc-HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHH-HHHhc--CChHHHHHHHHHHHHHHHHHHHHhcCCce
Q 015230 257 LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL-KRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAI 332 (411)
Q Consensus 257 ~~~g~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l-~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 332 (411)
-|-|.+.++ +++.+.+.. ..+.+..-++.....|+-..++ +.++. ++..+++.++++.+.+.|.+. ++..
T Consensus 234 PrGG~Il~~~eel~kkin~--aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~----G~~v 307 (413)
T COG0112 234 PRGGIILTNDEELAKKINS--AVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER----GFKV 307 (413)
T ss_pred CCceEEEeccHHHHHHhhh--hcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc----CCeE
Confidence 145555666 478888774 1222212122222333322233 33332 566678888999999888875 3222
Q ss_pred EEee-ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC----------cceee--e----cCCCHH
Q 015230 333 CGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFT--S----LAHSSD 395 (411)
Q Consensus 333 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~----------~~~~~--~----~~~t~~ 395 (411)
-..+ ...++.+++.+. ....+...+.|.+-||.+.-..- ..+|+ + ....++
T Consensus 308 vsGgTdnHl~lVDl~~~------------~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~ 375 (413)
T COG0112 308 VSGGTDNHLVLVDLRSK------------GLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEA 375 (413)
T ss_pred ecCCccceEEEEEcccC------------CCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHH
Confidence 1111 245777777532 11235666777777998865421 12576 2 455678
Q ss_pred HHHHHHHHHHHHHHh
Q 015230 396 DIQHTITAAEKVLRQ 410 (411)
Q Consensus 396 ~i~~~i~~l~~~~~~ 410 (411)
+.+++-+.+.+++..
T Consensus 376 e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 376 EMEEIADLIADVLDG 390 (413)
T ss_pred HHHHHHHHHHHHHhc
Confidence 888888888887753
No 358
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.33 E-value=2.1e-12 Score=119.47 Aligned_cols=299 Identities=12% Similarity=0.081 Sum_probs=159.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCC-CCC
Q 015230 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSP 152 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~ 152 (411)
+.....+..+..++.++.....+.+||.|.++.+++.. ..++++.|..+...|-+...++.+.|..+.++... ...
T Consensus 64 p~G~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a---~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 64 PEGIIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMA---LCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEY 140 (417)
T ss_dssp TBTHHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHH---HTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TT
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHH---hcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcccc
Confidence 45556666666777774444455666777777777763 33444445556666767777888888765554322 112
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE---EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGEIA---AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~---~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~ 229 (411)
++.. .+....-+.+.++++++++++..+ +++++|.+ .|...+ +++|.++|++++++|++||+|.+.
T Consensus 141 gi~~-----~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAhGah 209 (417)
T PF01276_consen 141 GIIG-----GISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEAHGAH 209 (417)
T ss_dssp S-BE-----EB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-TT-TT
T ss_pred CCcc-----CCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEcccccc
Confidence 2211 000000145899999999877666 77777755 688888 999999999999999999999633
Q ss_pred -ccccCccccccCCCcc-------hh--hhhhhccCCcc-ccccccc-------HHHHHHhcCCCCcccccCCCCCHHHH
Q 015230 230 -RLAYGGAQEYFGVTPD-------LT--TLGKIIGGGLP-VGAYGGR-------RDIMEMVAPAGPMYQAGTLSGNPLAM 291 (411)
Q Consensus 230 -~~g~~~~~~~~~~~~d-------~~--~~sK~~~~G~~-~g~~~~~-------~~~~~~~~~~~~~~~~~t~~~~~~~~ 291 (411)
.... +.........| ++ |.-|.+++ +. .+++..+ +++.+.+. ...|.+++-+-+
T Consensus 210 ~~F~~-lp~~a~~~gad~~~~~~~~vvqS~HKtL~a-ltQts~lh~~~~~~v~~~~~~~~l~------~~~TTSPSY~lm 281 (417)
T PF01276_consen 210 FGFHP-LPRSALALGADRPNDPGIIVVQSTHKTLPA-LTQTSMLHVKGDRIVDHERVNEALS------MHQTTSPSYPLM 281 (417)
T ss_dssp GGCSG-GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHHHHHHHHH------HHS-SS--HHHH
T ss_pred ccCCC-CccchhhccCccccccceeeeechhhcccc-cccceEEEecCCCcccHHHHHHHHH------HHcCCChHHHHH
Confidence 2221 11122233344 54 56688763 33 3444332 22333332 233555666666
Q ss_pred HHHHHHHHHH-hc--CChHHHHHHHHHHHHHHHHHHHHhcCCc----eEEeeec------------------ceEEEEEe
Q 015230 292 TAGIHTLKRL-KE--PGTYEYLNKITGELTQGIIDAGKKAGHA----ICGGYIS------------------GMFGFFFT 346 (411)
Q Consensus 292 a~~~~~l~~~-~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~g------------------~~~~~~~~ 346 (411)
+..-.+.+.+ .. +++.++..+....++++++++.....+. ..+.+.+ ....++..
T Consensus 282 ASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~~~~~~~lDP~ 361 (417)
T PF01276_consen 282 ASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGLADDYYMLDPT 361 (417)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT--TTSEEE-TT
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhcccCccccCCc
Confidence 6655555555 22 6788889999999999997642211111 1122222 02223221
Q ss_pred cCCCCC--c--chhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCH
Q 015230 347 EGPVYN--F--EDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSS 394 (411)
Q Consensus 347 ~~~~~~--~--~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~ 394 (411)
+..+.. + .......+..+..+.+.|.++||.+.-...+.+-+ +...|+
T Consensus 362 K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~~~~I~~Ek~d~~~vL~l~t~G~t~ 415 (417)
T PF01276_consen 362 KLTINTPGIDADGELSELGIPGYIVEKYLREHGIQVEKTDLYNVLFLFTIGDTK 415 (417)
T ss_dssp EEEEE-STBETTSSB-SS---HHHHHHHHHHTTEE-SEEESSEEEEE--TTS-H
T ss_pred EEEEEccCcCcCCcccccCCCHHHHHHHHHHcCCEEEeccCccEEEEecCCCCC
Confidence 111000 0 00001234566788999999999998776555432 445454
No 359
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.30 E-value=2.5e-10 Score=101.80 Aligned_cols=296 Identities=13% Similarity=0.105 Sum_probs=159.1
Q ss_pred HHHHHHHHhhCC-CCCEEEEeCChHHHHHH-HHHHHHhc-----------cCCcEEEEEeCCcCCCchhhhhhcCCCCcc
Q 015230 79 NVLAEMVISAVP-SIEMVRFVNSGTEACMG-VLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKAGSGVAT 145 (411)
Q Consensus 79 ~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~-al~~~~~~-----------~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~ 145 (411)
.++.+..++.++ ..++++...+.+-.+.. ++.-+..+ ..+-+.++..|+|-.++. ....-|-+ -
T Consensus 72 pe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa-i~E~~Gie--m 148 (425)
T PF12897_consen 72 PEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA-ITEHFGIE--M 148 (425)
T ss_dssp HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH-HHHHCT-E--E
T ss_pred HHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH-HHHhhCcE--E
Confidence 344444555555 67788777655544443 33222111 124579999999975432 22222221 1
Q ss_pred cCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHH-HHHhCCEEEEec
Q 015230 146 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALLIFDE 224 (411)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l-~~~~~~~li~De 224 (411)
+++|....-| |++.+|+++.+. ..++.++|.|.++|...++++.|-+++++++ +...+..++.|.
T Consensus 149 i~VpM~~dGP-------------DmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN 214 (425)
T PF12897_consen 149 IPVPMTEDGP-------------DMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN 214 (425)
T ss_dssp EEEEEETTEE--------------HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred EecCCCCCCC-------------CHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence 1122222211 899999998765 5799999999999977788888889999998 346799999999
Q ss_pred ccc--cc-ccccCcc-cccc-----CCCcc----hhhhhhhccCCcccccccccHHHHHHhcCCCCcccccCCCCCHHHH
Q 015230 225 VMT--GF-RLAYGGA-QEYF-----GVTPD----LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 291 (411)
Q Consensus 225 ~~~--g~-~~g~~~~-~~~~-----~~~~d----~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~ 291 (411)
+|+ .+ ....... .+.+ .-.|| +.|.||---+|-.++++..++.-++.+.. .....+.+.+-+.+
T Consensus 215 AY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~---~~~~~tIgpdKvNQ 291 (425)
T PF12897_consen 215 AYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKK---HLSVQTIGPDKVNQ 291 (425)
T ss_dssp TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHH---HHHHH-S---HHHH
T ss_pred CceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHH---HhcCceeCccHHHH
Confidence 996 22 1111100 1111 01344 34899943334458899888877776652 23334666677777
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH-------HH-hcCC-ceEEeeecceEEEEEecCCCCCcchhcccchH
Q 015230 292 TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA-------GK-KAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETT 362 (411)
Q Consensus 292 a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~-~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 362 (411)
......+...+ ..+++++++.+..++-+++.. +. ..++ .+..+..|.|++++..+ .
T Consensus 292 LRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~--------------G 356 (425)
T PF12897_consen 292 LRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD--------------G 356 (425)
T ss_dssp HHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST--------------T
T ss_pred HHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC--------------C
Confidence 66655554322 267788888888777665332 22 2233 23445568899998853 2
Q ss_pred HHHHHHHHHHHcCeEeccCCC----------cceee-ecCCCHHHHHHHHHHHHHHHH
Q 015230 363 KFARFYRGMLEEGVYFAPSQF----------EAGFT-SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 363 ~~~~~~~~l~~~Gi~v~~~~~----------~~~~~-~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.++++.+.+++.||.+.+.+. ..+|+ |..-+.++++.+++.+.-+++
T Consensus 357 ~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 357 TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp -HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999542 13788 566688999999999876643
No 360
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.29 E-value=6.4e-10 Score=103.14 Aligned_cols=298 Identities=10% Similarity=-0.006 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHhhCCC---CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCc-h-hhhhhcCCC-CcccCC
Q 015230 75 CLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA-D-PFLVKAGSG-VATLGL 148 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~---~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~-~-~~~~~~g~~-~~~~~~ 148 (411)
.+...++.+.|.+.++. .+-++++.|||.++++++..... .+++++++. + +.|.. . ......|.+ +..+..
T Consensus 38 ~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~-~~g~~vLv~-g-~FG~r~~~eia~~~g~~~v~~l~~ 114 (374)
T TIGR01365 38 KEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLG-CRGVDVLAW-E-SFGKGWVTDVTKQLKLPDVRVLEA 114 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCC-CCCCeEEEE-C-HHHHHHHHHHHHhcCCCCcEEEcC
Confidence 44556667777777762 23467799999999999985321 234567764 3 44433 2 222334442 344333
Q ss_pred CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc
Q 015230 149 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228 (411)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g 228 (411)
++...+ |+++++. + .. +++.++..++|+..| ++++...+ +++++|+|.+-+
T Consensus 115 ~~g~~~--------------~~~~ve~--~---~~---v~~vhnETSTGv~np----v~~i~~~~--~~~lliVDavSs- 165 (374)
T TIGR01365 115 EYGKLP--------------DLKKVDF--K---ND---VVFTWNGTTSGVRVP----NGDFIPAD--REGLTICDATSA- 165 (374)
T ss_pred CCCCCC--------------CHHHcCC--C---CC---EEEecCCCchheecc----cccccccc--CCCcEEEEccch-
Confidence 322222 6777652 1 12 456666677898888 65544222 589999998886
Q ss_pred cccccCccccccCCCcchhhhhhhccCCcccccccccHHHHHHhcCCCC-----c--------------c-cccCCCCCH
Q 015230 229 FRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-----M--------------Y-QAGTLSGNP 288 (411)
Q Consensus 229 ~~~g~~~~~~~~~~~~d~~~~sK~~~~G~~~g~~~~~~~~~~~~~~~~~-----~--------------~-~~~t~~~~~ 288 (411)
+ .+..+.++ +++.-+.+..|++++---+|+++.+++.++....... . . ....++++.
T Consensus 166 ~-g~~~l~~d--~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v 242 (374)
T TIGR01365 166 A-FAQDLDYH--KLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSM 242 (374)
T ss_pred h-cCCCCChh--HCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHH
Confidence 1 12233333 2333345788999841116777888888776542110 0 0 122345555
Q ss_pred HHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc-eEEEEEecCCCCCcchhcccchHH
Q 015230 289 LAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTK 363 (411)
Q Consensus 289 ~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 363 (411)
.+..+...+++.+.+ ++..++.+++.+.+++.++++............... ...+.+....+.... .....+
T Consensus 243 ~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~---~~~~~~ 319 (374)
T TIGR01365 243 LCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALD---EDAQAD 319 (374)
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccc---cchhhH
Confidence 666666666765544 455566777777777777776311111100111222 333333221110000 000111
Q ss_pred -HHHHHHHHHHcCeEeccCCC----cceee--ecCCCHHHHHHHHHHHHHHHHh
Q 015230 364 -FARFYRGMLEEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 364 -~~~~~~~l~~~Gi~v~~~~~----~~~~~--~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
..++.+.|+++||.+.++.. ..+|| ...++.++++.+++.|+=+..+
T Consensus 320 ~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 320 FAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred HHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 47899999999999997743 45788 3568999999999999866554
No 361
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.27 E-value=7.9e-09 Score=95.48 Aligned_cols=340 Identities=14% Similarity=0.043 Sum_probs=183.3
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA 112 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~ 112 (411)
....++|+.|-.++ +...++..+|+.. +. .|+. +....+|.+..++.+ +.+.+++|.+|..+...+++..
T Consensus 39 s~dV~IDLrSDTgT---~apS~~m~aAM~~----GDD~Y~g-dpSv~~Lee~vael~-G~E~alpthqGRgaE~Il~~~~ 109 (467)
T TIGR02617 39 SEDVFIDLLTDSGT---GAVTQSMQAAMMR----GDEAYSG-SRSYYALAESVKNIF-GYQYTIPTHQGRGAEQIYIPVL 109 (467)
T ss_pred CCCeEEECccCCCC---CCCCHHHHHHHHc----CCccccc-CchHHHHHHHHHHHh-CCceEEECCCCchHHHHHHHhh
Confidence 44578999997443 2246677777765 32 2322 223345555565655 7888999999998888877642
Q ss_pred HhccCCcEEE------EEeCCcCCCc-hhhhhhcCCCCcccCCC---------CCCCCCCCCCCceeecCCCCHHHHHHH
Q 015230 113 RAFTGRERII------KFEGCYHGHA-DPFLVKAGSGVATLGLP---------DSPGVPKGATYETLTAPFNDVSALENL 176 (411)
Q Consensus 113 ~~~~~~~~vi------~~~~~~~~~~-~~~~~~~g~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~d~~~l~~~ 176 (411)
.. .+++.++ +....+|..+ .+....+|..+..+..+ .+.|.. |++++++.
T Consensus 110 ~~-~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~-------------dl~~le~~ 175 (467)
T TIGR02617 110 IK-KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNF-------------DLEGLERG 175 (467)
T ss_pred cc-cccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCc-------------CHHHHHHH
Confidence 11 1122222 1122333332 33455556543332211 111211 89999999
Q ss_pred HHcCC-CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc----cc-cc---c--cCccc----cccC
Q 015230 177 FENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT----GF-RL---A--YGGAQ----EYFG 241 (411)
Q Consensus 177 ~~~~~-~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~----g~-~~---g--~~~~~----~~~~ 241 (411)
++.+. +++..+...-.+|..|..+.+.+.+++++++|++||++++.|.+.. -| .. + ..... +.+.
T Consensus 176 I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~ 255 (467)
T TIGR02617 176 IEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK 255 (467)
T ss_pred HhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc
Confidence 98642 4555555555556666666677889999999999999999998762 11 11 1 00000 0011
Q ss_pred CCcc--hhhhhhhccCCcccccc-cccHH----HHHHhcCCCCcc-cccCCCC-CHHHHHHHHHHHHHHhcCChHHHHHH
Q 015230 242 VTPD--LTTLGKIIGGGLPVGAY-GGRRD----IMEMVAPAGPMY-QAGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNK 312 (411)
Q Consensus 242 ~~~d--~~~~sK~~~~G~~~g~~-~~~~~----~~~~~~~~~~~~-~~~t~~~-~~~~~a~~~~~l~~~~~~~~~~~~~~ 312 (411)
..| .+|+||.+++ |+|.+ +++++ +.+..+.....+ .+.|+++ +.--+.+....|+...+++.+.+--+
T Consensus 256 -~aDsvt~slsKglgA--pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~ 332 (467)
T TIGR02617 256 -YADMLAMSAKKDAMV--PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN 332 (467)
T ss_pred -cCCEEEEEcCCCCCC--cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH
Confidence 123 3478898876 78766 55544 334433211111 1224433 22222222223443333555555556
Q ss_pred HHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHH-HcCeEeccC------CC--
Q 015230 313 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPS------QF-- 383 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~------~~-- 383 (411)
..+++.++|++. +++... ..|.-+.++-..- .+.+. ...=-+..++-.|. +-||-..-- ..
T Consensus 333 qv~yl~~~L~~~----Gvpi~~-~Gghav~iDa~~~-lphip----~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~ 402 (467)
T TIGR02617 333 QVQYLVNGLEEI----GVVCQQ-AGGHAAFVDAGKL-LPHIP----ADQFPAHALACELYKVAGIRAVEIGSLLLGRDPK 402 (467)
T ss_pred HHHHHHHHHHhC----CCcEEe-cCccEEEEehhhh-CCCCC----hhhCcHHHHHHHHHHHcCcceEeecceecccCCC
Confidence 667777777765 555544 5566777765431 01111 11111345555554 446643111 10
Q ss_pred ---------cceee--e-cCCCHHHHHHHHHHHHHHHH
Q 015230 384 ---------EAGFT--S-LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 384 ---------~~~~~--~-~~~t~~~i~~~i~~l~~~~~ 409 (411)
..+|+ | -.-|.+++|...+++..+.+
T Consensus 403 ~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 403 TGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred CCccCCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 11454 3 45588999999999988765
No 362
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.25 E-value=4.5e-10 Score=103.73 Aligned_cols=306 Identities=16% Similarity=0.126 Sum_probs=159.4
Q ss_pred CCcHHHHHHHHHHHHcCCC--------CCCC---CHHHHHHHHHHHhhCCCCC----EE-EEeCChHHHHHHHHHHHHhc
Q 015230 52 HADDQVLAALGETMKKGTS--------FGAP---CLLENVLAEMVISAVPSIE----MV-RFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 52 ~~~~~v~~a~~~~l~~~~~--------~~~~---~~~~~~l~~~l~~~~~~~~----~v-~~~~~g~~a~~~al~~~~~~ 115 (411)
...|.+++++...+.+-.. |++. ++.+....++..+.++ .+ .+ +-..||+.|+.+++.. ..
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~-~~~~~w~anvqp~SGs~An~av~~a--Ll 107 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG-AEPKEWYANVQPHSGSQANLAVYMA--LL 107 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT--STTTEEEE---SSHHHHHHHHHHH--HT
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC-CCcccceEEeecCCchHHHHHHHHH--HH
Confidence 3678888888777776211 1111 3444455555556664 33 33 3445899999888874 33
Q ss_pred cCCcEEEEEeCCcCCCchhhhhh-------cCCCCcccC--CCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 116 TGRERIIKFEGCYHGHADPFLVK-------AGSGVATLG--LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 116 ~~~~~vi~~~~~~~~~~~~~~~~-------~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
.++++|+.++...-|+..-.... .+......+ +....+.. |.+++++.++++ ++++
T Consensus 108 ~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~I-------------D~d~l~~~a~~~--kPkl 172 (399)
T PF00464_consen 108 KPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLI-------------DYDELEKLAKEH--KPKL 172 (399)
T ss_dssp -TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB--------------HHHHHHHHHHH----SE
T ss_pred hhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeE-------------CHHHHHHHHhhc--CCCE
Confidence 56788999887765543211110 111111111 11111111 899999999875 7888
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-cc-ccccCccccccCCCcchh--hhhhhccCCcc-ccc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLP-VGA 261 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~-~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~-~g~ 261 (411)
|++-... +.-+.+ +++++++|++.|++|++|-+|. |+ -.|. +. +.+.. .|++ |.-|+|.| | -|.
T Consensus 173 Ii~G~S~-----y~~~~d-~~~~reIad~vga~l~~D~sH~~GLIa~g~-~~-~P~~~-ADvvt~sThKtl~G--Prggi 241 (399)
T PF00464_consen 173 IICGASS-----YPRPID-FKRFREIADEVGAYLMADISHIAGLIAGGL-FP-NPFPY-ADVVTGSTHKTLRG--PRGGI 241 (399)
T ss_dssp EEEE-SS-----TSS----HHHHHHHHHHTT-EEEEE-TTTHHHHHTTS-S---GCCT-SSEEEEESSGGG-S--SS-EE
T ss_pred EEECchh-----ccCccC-HHHHHHHHHhcCcEEEecccccccceehhe-ec-Ccccc-ceEEEeeccccccc--cCceE
Confidence 8886533 111222 8999999999999999999995 77 4442 21 11222 4666 45699986 5 455
Q ss_pred cccc--------------HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHH
Q 015230 262 YGGR--------------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 324 (411)
Q Consensus 262 ~~~~--------------~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~ 324 (411)
+..+ +++.+.+.. ..+.+.+-+...-..++...++..... ++..+++.++++.+.+.|.+.
T Consensus 242 I~~~~~~~~~~~~~~~~~~~l~~~I~~--avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~ 319 (399)
T PF00464_consen 242 ILTNKGSKNVDKKGKEIDEELAEKIDS--AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER 319 (399)
T ss_dssp EEES-SEEEE-TTS-EEEHHHHHHHHH--HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCccccCCcccccHHHHHHHhcc--ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5667 677777763 111111111122222332233333222 567788889999999999887
Q ss_pred HHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccC----C-----Ccceeee------
Q 015230 325 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS----Q-----FEAGFTS------ 389 (411)
Q Consensus 325 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~----~-----~~~~~~~------ 389 (411)
..+. ... .-...++++++.+. ..+..+..+.|.+.||.+... . ...+|+.
T Consensus 320 G~~v--~~g-gTd~H~vlvd~~~~------------~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~ 384 (399)
T PF00464_consen 320 GFKV--VTG-GTDNHQVLVDLRSF------------GIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTR 384 (399)
T ss_dssp T-EE--GGG-S-SSSEEEEEGGGG------------TS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHH
T ss_pred CcEE--EEC-CCCCCeEEEEeccc------------ccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHh
Confidence 3221 110 11355788887532 123467778888999999542 1 1236772
Q ss_pred cCCCHHHHHHHHHH
Q 015230 390 LAHSSDDIQHTITA 403 (411)
Q Consensus 390 ~~~t~~~i~~~i~~ 403 (411)
....+++++++-+.
T Consensus 385 rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 385 RGMKEEDMKEIAEL 398 (399)
T ss_dssp TT--HHHHHHHHHH
T ss_pred CCCCHHHHHHHHhh
Confidence 45567777766554
No 363
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.24 E-value=5e-10 Score=104.45 Aligned_cols=174 Identities=22% Similarity=0.187 Sum_probs=115.4
Q ss_pred CHHHHHHHHHHHhhCCCC--------CEEEEeCChHHHHHHHHHHHHhcc-----------CCcEEEEEeCCcCCCchhh
Q 015230 75 CLLENVLAEMVISAVPSI--------EMVRFVNSGTEACMGVLRLARAFT-----------GRERIIKFEGCYHGHADPF 135 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~--------~~v~~~~~g~~a~~~al~~~~~~~-----------~~~~vi~~~~~~~~~~~~~ 135 (411)
.+.+.++.+|+++.++-+ ..-++|+|||+++..++..+|... .+..+++....-|....-+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 677889999999999722 367999999999999998776431 1345666666677777777
Q ss_pred hhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC---CCcEEEEEEcccCCCCCccCCCHHHHHHHHHH
Q 015230 136 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI 212 (411)
Q Consensus 136 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l 212 (411)
....|-+++.++....... |+++|++.+++. +..+.+|+.+-....+|.+-+ +++|+++
T Consensus 158 a~~lGlg~~~I~~~~~~~m--------------d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i 219 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRM--------------DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADI 219 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB---------------HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHH
T ss_pred cceeeeEEEEecCCcchhh--------------hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhh
Confidence 7777877666555432222 899999988753 123446777777777899988 9999999
Q ss_pred HHHhCCEEEEecccccc-ccccCccccccCCC-cchh--hhhhhccCCcccccccccH
Q 015230 213 TKENGALLIFDEVMTGF-RLAYGGAQEYFGVT-PDLT--TLGKIIGGGLPVGAYGGRR 266 (411)
Q Consensus 213 ~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~-~d~~--~~sK~~~~G~~~g~~~~~~ 266 (411)
|++|++++++|.++.|. ...+..-.-..++. .|-+ ..-|+++..++.|++..+.
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~ 277 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRD 277 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESS
T ss_pred ccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeec
Confidence 99999999999999873 22111111111222 3333 4679998767788886643
No 364
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.23 E-value=1.8e-09 Score=110.58 Aligned_cols=310 Identities=11% Similarity=0.139 Sum_probs=176.2
Q ss_pred EEeccCCccccccCC-CcHHHHHHHHHHHHcCCCCC-CC-------CHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 38 YIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFG-AP-------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~-~~~~v~~a~~~~l~~~~~~~-~~-------~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
+.+|++. .+++| .++.+.+++.+...-.+.|+ |. -+...++...++++.+ ..+++.++.++|.+.++
T Consensus 104 ~~~fiG~---G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea 180 (993)
T PLN02414 104 FKSYIGM---GYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEA 180 (993)
T ss_pred cccccCC---CCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHH
Confidence 5566655 77777 66767688887765433332 22 2234566677777887 78899999999999998
Q ss_pred HHHHHHhcc--CCcEEEEEeCCcCCCchhhhhh-cCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcE
Q 015230 108 VLRLARAFT--GRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184 (411)
Q Consensus 108 al~~~~~~~--~~~~vi~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 184 (411)
++... ... ++++|++.+..|+......... .+. +..+..++..+.+ ...+.+
T Consensus 181 ~~~a~-~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~-----------------GieV~~v~~~~~~-------~~~~~v 235 (993)
T PLN02414 181 MAMCN-NILKGKKKKFLIASNCHPQTIDVCQTRADGL-----------------GLEVVVADEKDFD-------YSSGDV 235 (993)
T ss_pred HHHHH-hcccCCCCEEEEcCccCHhHHHHHHHhhhhc-----------------CCEEEEecchhhc-------cccCce
Confidence 77543 333 3467888777776543332211 111 1233334322211 112245
Q ss_pred EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-ccccccCccccccCCCcchh--hhhhhc---c-CCc
Q 015230 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKII---G-GGL 257 (411)
Q Consensus 185 ~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~~g~~~~~~~~~~~~d~~--~~sK~~---~-~G~ 257 (411)
..++ ....+..|.+.+ +++|.++|+++|+++++ .++. ++ +..-....+| .|++ +..|+. + ||-
T Consensus 236 ~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~lal--~~l~~pge~G--ADi~vgsgqKwg~P~G~GGP 305 (993)
T PLN02414 236 CGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDLLAL--TMLKPPGEWG--ADIVVGSAQRFGVPMGYGGP 305 (993)
T ss_pred EEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECHHHh--cCCCCHhhcc--CcEEEECCCccccCCCCCCC
Confidence 4444 344456888888 99999999999999999 5553 11 1110112223 3543 444554 2 343
Q ss_pred ccccccccHHHHHHhcC----------CCCccc-------c----cCCCCCH---HHHHHHHHHH--HHHhc---CChHH
Q 015230 258 PVGAYGGRRDIMEMVAP----------AGPMYQ-------A----GTLSGNP---LAMTAGIHTL--KRLKE---PGTYE 308 (411)
Q Consensus 258 ~~g~~~~~~~~~~~~~~----------~~~~~~-------~----~t~~~~~---~~~a~~~~~l--~~~~~---~~~~~ 308 (411)
..|+++++++....+.. ..+.+. . -..+.|. .++.++.++. ..+.. +++.+
T Consensus 306 ~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ 385 (993)
T PLN02414 306 HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 385 (993)
T ss_pred CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 48899998887654431 000000 0 0112222 1222333222 12222 45667
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee
Q 015230 309 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 388 (411)
Q Consensus 309 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~ 388 (411)
++.++..+++++|++.. +..... ..-..+.|.+ + ...++.+.|.++||.+.....+.+++
T Consensus 386 ri~~la~~l~~~L~~~G--~~~~~~--~~f~~vt~~~-------------~---~~~~v~~~L~~~gI~l~~~~~~~lrv 445 (993)
T PLN02414 386 RVHGLAGVFAAGLKKLG--FQVQSL--PFFDTVKVKC-------------S---DADAIADAAAKVGINLRVVDANTVTV 445 (993)
T ss_pred HHHHHHHHHHHHHhhcC--CccCCC--CCcCeEEEec-------------C---CHHHHHHHHHHCCCeeEEecCCeEEE
Confidence 78888888888886642 111111 1111222322 1 12678999999999887665555655
Q ss_pred --ecCCCHHHHHHHHHHHH
Q 015230 389 --SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 389 --~~~~t~~~i~~~i~~l~ 405 (411)
....|++|||++++.|.
T Consensus 446 s~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 446 SFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred EeeccCCHHHHHHHHHHHc
Confidence 57889999999999996
No 365
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.19 E-value=3.7e-09 Score=104.29 Aligned_cols=311 Identities=11% Similarity=0.012 Sum_probs=164.6
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchh-hhhhcCCCCcccC-CCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP-FLVKAGSGVATLG-LPDSP 152 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~-~~~~~g~~~~~~~-~~~~~ 152 (411)
+....+..+..++.++.....+++||.|.++.+++.. .+.+++. |.++...|-+... ++.++|..+.++. .-...
T Consensus 173 eG~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a--~~~~Gd~-VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 173 EGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNA--LLTPGDL-VLFDRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred ChHHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHH--hcCCCCE-EEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence 4444555556666675445666777778888777763 3334444 5556666655554 5778887555543 22122
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcC-CC-------cEEEEEEcccCCCCCccCCCHHHHHHHHHH-HHHhCCEEEEe
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENN-KG-------EIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALLIFD 223 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~-------~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l-~~~~~~~li~D 223 (411)
|++... +...+ +.+.++++++++ ++ -..+|+.+|.+ .|...+ +++|.++ |++++ +|++|
T Consensus 250 Gi~g~I--~~~~~---~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~llvD 317 (720)
T PRK13578 250 GFIGGI--DAHCF---DEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-YILFD 317 (720)
T ss_pred CCcCCC--ChHHc---cHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-cEEEe
Confidence 322110 00001 467789999876 33 24456666655 688888 9999998 68888 99999
Q ss_pred cccccc-ccccC---ccccccCCCcc----hh--hhhhhccCCcc-cccccccH-------------HHHHHhcCCCCcc
Q 015230 224 EVMTGF-RLAYG---GAQEYFGVTPD----LT--TLGKIIGGGLP-VGAYGGRR-------------DIMEMVAPAGPMY 279 (411)
Q Consensus 224 e~~~g~-~~g~~---~~~~~~~~~~d----~~--~~sK~~~~G~~-~g~~~~~~-------------~~~~~~~~~~~~~ 279 (411)
|+|.+. ...+. +........+| ++ |.-|.+++ +. .+++-.+. ++.+.+.
T Consensus 318 EAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~al~------ 390 (720)
T PRK13578 318 SAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNNAFM------ 390 (720)
T ss_pred CcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHHHHH------
Confidence 999754 33322 11111223445 44 55687763 22 34443322 2222222
Q ss_pred cccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCce--EE--------------------
Q 015230 280 QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAI--CG-------------------- 334 (411)
Q Consensus 280 ~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~-------------------- 334 (411)
...|.+++-+-+|..-.+...++. +++.++..+....+++.+.+....+.... .+
T Consensus 391 m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w 470 (720)
T PRK13578 391 LHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFF 470 (720)
T ss_pred HHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhccccccc
Confidence 122333333333333333333332 56777788888888888733211111000 00
Q ss_pred --------eeecc----eEEEEEecCCCCCcchh-----cccchHHHHHHHHHHHHcCeEeccCCCccee--eecCCCHH
Q 015230 335 --------GYISG----MFGFFFTEGPVYNFEDA-----KKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSD 395 (411)
Q Consensus 335 --------~~~g~----~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~~~~t~~ 395 (411)
++... ...++..+..+..-+.. ....+.-+..+.+.|+++||.+.-...+.+- ++...|++
T Consensus 471 ~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~ 550 (720)
T PRK13578 471 SFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDMA 550 (720)
T ss_pred ccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHH
Confidence 00000 11111111000000000 0001122578999998999999887765543 36788999
Q ss_pred HHHHHHHHHHHH
Q 015230 396 DIQHTITAAEKV 407 (411)
Q Consensus 396 ~i~~~i~~l~~~ 407 (411)
++++++++|.++
T Consensus 551 ~~~~Lv~aL~~f 562 (720)
T PRK13578 551 KLQQLVAMLARF 562 (720)
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
No 366
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.19 E-value=1.1e-08 Score=101.07 Aligned_cols=308 Identities=8% Similarity=-0.026 Sum_probs=170.8
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccC-CCCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPG 153 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~ 153 (411)
+....+..+..++.++.....+++||.|.++.+++.. ..++++.|.++...|-+...++.++|..+.++. .-...|
T Consensus 194 ~G~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a---~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~G 270 (713)
T PRK15399 194 TGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMY---AAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNALG 270 (713)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHH---hcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccccccC
Confidence 4444555555566674444556677778888777763 334444555666667667777888887655543 221222
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCc---EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEE-EEecccccc
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL-IFDEVMTGF 229 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~---~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~l-i~De~~~g~ 229 (411)
++.. +.. ..-+.+.+++.++++++. .++|+.+|.+ .|.+.+ +++|.++| |+.+ ++||+|.+.
T Consensus 271 i~g~----I~~-~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEAhgah 336 (713)
T PRK15399 271 ILGG----IPR-REFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSAWVPY 336 (713)
T ss_pred CcCC----CCh-hhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEeccchhh
Confidence 2210 000 001469999999987653 4677777744 688888 88999988 6776 599999754
Q ss_pred -cccc----CccccccCCCcchh-----hhhhhccCCcc-ccccccc-----HHHHHHhcCCCCcccccCCCCCHHHHHH
Q 015230 230 -RLAY----GGAQEYFGVTPDLT-----TLGKIIGGGLP-VGAYGGR-----RDIMEMVAPAGPMYQAGTLSGNPLAMTA 293 (411)
Q Consensus 230 -~~g~----~~~~~~~~~~~d~~-----~~sK~~~~G~~-~g~~~~~-----~~~~~~~~~~~~~~~~~t~~~~~~~~a~ 293 (411)
...+ ..++. .+-.+|.+ |.-|.+++ +. .+++..+ +++.+.+. ...|.+++-+-+|.
T Consensus 337 ~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~a~~------m~~STSPsY~LmAS 408 (713)
T PRK15399 337 THFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNEAFM------MHTSTSPSYPIVAS 408 (713)
T ss_pred hhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHHHHH------HHcCCCcHHHHHHH
Confidence 3322 22222 11134554 66687764 22 3344222 22333332 22244444444444
Q ss_pred HHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCc-eEEee------ecc------------------eEEEEE
Q 015230 294 GIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGY------ISG------------------MFGFFF 345 (411)
Q Consensus 294 ~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~------~g~------------------~~~~~~ 345 (411)
.-.+...++. +++.++..+....+++.+.++......+ ..+-+ ... .+.++.
T Consensus 409 LD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP 488 (713)
T PRK15399 409 VETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDP 488 (713)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCC
Confidence 4444444442 5677888888888998887763211000 00000 000 001111
Q ss_pred ecCCCCC--cc--hhcccchHHHHHHHHHHHHcCeEeccCCCccee--eecCCCHHHHHHHHHHHHHH
Q 015230 346 TEGPVYN--FE--DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 346 ~~~~~~~--~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~~~~t~~~i~~~i~~l~~~ 407 (411)
.+..+.. +. -.....+..+..+.+.|.++||.+.-...+.+- ++...|+++++++++.|.+.
T Consensus 489 ~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 489 VKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred ceEEEEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 0000000 00 000012345678899999999999887765543 36788999999999988765
No 367
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.15 E-value=4.6e-09 Score=103.58 Aligned_cols=309 Identities=8% Similarity=-0.024 Sum_probs=171.3
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC-CCCCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPG 153 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~ 153 (411)
+....+..+..++.++.....+++||.|.++.+++.. ..++++.|.++...|-+...++.++|..+.++.. -...|
T Consensus 194 ~G~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a---~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~G 270 (714)
T PRK15400 194 SGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMY---SAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAYG 270 (714)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHH---hcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 4444555555666664444556667777777777763 3344555566777777777788888876555432 22222
Q ss_pred CCCCCCCceeecCCCCHHHHHHHHHcCCCcE---EEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-
Q 015230 154 VPKGATYETLTAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229 (411)
Q Consensus 154 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~---~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~- 229 (411)
++.. +. ...-+.+.+++.++++++.. .+|+.+|.+ .|.+.+ +++|.++|+.++ +++||+|.+.
T Consensus 271 i~g~----I~-~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAwgah~ 337 (714)
T PRK15400 271 ILGG----IP-QSEFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAWVPYT 337 (714)
T ss_pred CccC----CC-ccccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccchhhh
Confidence 2211 00 00115899999999876533 477777754 688888 999999999887 6899999754
Q ss_pred ccccC----ccccccCCCc-c--hh--hhhhhccCCcc-cccccc-----cHHHHHHhcCCCCcccccCCCCCHHHHHHH
Q 015230 230 RLAYG----GAQEYFGVTP-D--LT--TLGKIIGGGLP-VGAYGG-----RRDIMEMVAPAGPMYQAGTLSGNPLAMTAG 294 (411)
Q Consensus 230 ~~g~~----~~~~~~~~~~-d--~~--~~sK~~~~G~~-~g~~~~-----~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~ 294 (411)
...+. .++. .+-.+ | ++ |.-|.+++ +. .+++-. .+++.+.+. ...|.+++-+-+|..
T Consensus 338 ~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~------m~~STSPsY~l~ASL 409 (714)
T PRK15400 338 NFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM------MHTTTSPHYGIVAST 409 (714)
T ss_pred ccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH------HHcCCCcHHHHHHHH
Confidence 33222 2222 12211 2 33 56687764 22 233322 123333332 222444444444444
Q ss_pred HHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhc-CCceEEee-e-----------------cc------eEEEEEe
Q 015230 295 IHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGY-I-----------------SG------MFGFFFT 346 (411)
Q Consensus 295 ~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~-~-----------------g~------~~~~~~~ 346 (411)
-.+...++. +++.++..+....+++.+.++.... ++...+-+ . |+ ++.++..
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~ 489 (714)
T PRK15400 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPI 489 (714)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccCCc
Confidence 444444442 5677888888888888887753200 00000000 0 00 0011111
Q ss_pred cCCCC--Ccc--hhcccchHHHHHHHHHHHHcCeEeccCCCccee--eecCCCHHHHHHHHHHHHHH
Q 015230 347 EGPVY--NFE--DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 407 (411)
Q Consensus 347 ~~~~~--~~~--~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~--~~~~~t~~~i~~~i~~l~~~ 407 (411)
+..+. .+. -.....+..+..+.+.|.++||.+.-...+.+- ++...|+++++.+++.|.+.
T Consensus 490 Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 490 KVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred eEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 10000 000 000012234578889999999999887765543 36788999999999988765
No 368
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.14 E-value=4.2e-09 Score=108.35 Aligned_cols=306 Identities=12% Similarity=0.078 Sum_probs=167.7
Q ss_pred cccCC-CcHHHHHHHHHHHH---cCCCCC-----CCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhccC
Q 015230 48 AIIGH-ADDQVLAALGETMK---KGTSFG-----APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG 117 (411)
Q Consensus 48 ~~~g~-~~~~v~~a~~~~l~---~~~~~~-----~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~~ 117 (411)
.++++ .++-+.+.+.+.-. ...+|+ +.-+...++.+.++++.+ ...++.+..++|.+.++++... ...+
T Consensus 84 G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~-~~~~ 162 (954)
T PRK05367 84 GYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAK-RVSK 162 (954)
T ss_pred CCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhh-hhcc
Confidence 67777 44445465655321 122222 123344566677777887 6778899999999999777543 3333
Q ss_pred --CcEEEEEeCCcCCCchhhhh-hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCC
Q 015230 118 --RERIIKFEGCYHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 194 (411)
Q Consensus 118 --~~~vi~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~ 194 (411)
+++|++.+..|+........ +...+ .++..++.++ +++ .+++.+++ ....+
T Consensus 163 ~~~~~vlv~~~~hP~~~~v~~t~a~~~G-----------------~ev~~~~~~~--d~~------~~~~~~vl-vq~p~ 216 (954)
T PRK05367 163 SKSNRFFVDDDVHPQTLDVLRTRAEPLG-----------------IEVVVGDAAK--ALD------HDDVFGVL-LQYPG 216 (954)
T ss_pred CCCCEEEEcCccCHHHHHHHHHHHHhCC-----------------CEEEEecCcc--CCC------cccEEEEE-EecCC
Confidence 37788877777654332211 11121 1223332221 111 13455543 34456
Q ss_pred CCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhc---cCCcc-cccccccHHHHH
Q 015230 195 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKII---GGGLP-VGAYGGRRDIME 270 (411)
Q Consensus 195 ~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~---~~G~~-~g~~~~~~~~~~ 270 (411)
..|.+.+ +++|.++|+++|+++++|-.+..+.... ....+|.+.-+.+..|+. +.|-| .|++++++++..
T Consensus 217 ~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l~--~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r 290 (954)
T PRK05367 217 TSGEVRD----YTALIAAAHARGALVAVAADLLALTLLT--PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKR 290 (954)
T ss_pred CCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCCC--ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHh
Confidence 6888888 9999999999999999998663110001 112233322233455652 21224 888888888877
Q ss_pred HhcCCCCc-----------------------ccccCCCCC-HHHHHHHHHH--HHHHhc---CChHHHHHHHHHHHHHHH
Q 015230 271 MVAPAGPM-----------------------YQAGTLSGN-PLAMTAGIHT--LKRLKE---PGTYEYLNKITGELTQGI 321 (411)
Q Consensus 271 ~~~~~~~~-----------------------~~~~t~~~~-~~~~a~~~~~--l~~~~~---~~~~~~~~~~~~~~~~~l 321 (411)
.+...... +...|.+.+ ..+..+..++ +..+.. +++.+++..+..+++++|
T Consensus 291 ~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L 370 (954)
T PRK05367 291 SMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGL 370 (954)
T ss_pred hCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 76421000 000111111 1111112222 232332 566677888888888888
Q ss_pred HHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHH
Q 015230 322 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQH 399 (411)
Q Consensus 322 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~ 399 (411)
++... .... ......+.+.+ + .+..++.+.|.++||.+.......+++ ....|++||++
T Consensus 371 ~~~G~--~~~~--~~~f~~~~~~~-------------~--~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~ 431 (954)
T PRK05367 371 RALGL--EVVH--DSFFDTLTVEV-------------G--GDAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAA 431 (954)
T ss_pred HhcCc--ccCC--CCCCCeEEEeC-------------C--CCHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHH
Confidence 66321 1110 01011222222 1 124789999999999996654445665 57789999999
Q ss_pred HHHHHH
Q 015230 400 TITAAE 405 (411)
Q Consensus 400 ~i~~l~ 405 (411)
+++.|.
T Consensus 432 l~~~l~ 437 (954)
T PRK05367 432 LLAVFG 437 (954)
T ss_pred HHHHHc
Confidence 999996
No 369
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.13 E-value=9.7e-09 Score=88.39 Aligned_cols=331 Identities=14% Similarity=0.063 Sum_probs=200.5
Q ss_pred cccCCCcHHHHHHHHHHHHcCC------CCCC---CCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhc-c
Q 015230 48 AIIGHADDQVLAALGETMKKGT------SFGA---PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-T 116 (411)
Q Consensus 48 ~~~g~~~~~v~~a~~~~l~~~~------~~~~---~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~-~ 116 (411)
+++|+.+...++.+.+.++.+. ++.+ +..-.+.+...+....+ ..+.|.+.|+-+--+...+....+- .
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTe 153 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTE 153 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcc
Confidence 7899999999999999988831 1111 12223455555666666 5667778887776665555322121 2
Q ss_pred CCcEEEEEeCCcCCCchhhhh---hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC
Q 015230 117 GRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193 (411)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~ 193 (411)
++-+|+....+|+....+... +-|..+.- .+. -+.+..+.+. + ..+++-+.|+++.+.++.|++..++
T Consensus 154 kR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~---sm~-~iePREGEet--l---RteDILd~IEkngDeiA~v~fSGvq 224 (465)
T KOG3846|consen 154 KRFKILLEKKAFPSDHYAIESQCKLHGISPEN---SMI-QIEPREGEET--L---RTEDILDTIEKNGDEIALVCFSGVQ 224 (465)
T ss_pred hhhhhhhccCCCCchHHHHHhhhhhcCCChHH---heE-Eecccccccc--h---hHHHHHHHHHhcCCeEEEEEeecce
Confidence 456788888888877665532 22221110 000 0000001111 1 4677888899888999999999999
Q ss_pred CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccc-cCccccccCCCcchhhhhhhccCC-cccccccccHHHHHH
Q 015230 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-YGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEM 271 (411)
Q Consensus 194 ~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g-~~~~~~~~~~~~d~~~~sK~~~~G-~~~g~~~~~~~~~~~ 271 (411)
--+|...+ +.+|-..-+..|+++=.|-+|+ .| ...-...||++....|.-|.+++| --+|.+...++..+.
T Consensus 225 yYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA---vgNVpL~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~ 297 (465)
T KOG3846|consen 225 YYTGQYFD----IGAITFAGQFKGCLVGFDLAHA---VGNVPLQLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKE 297 (465)
T ss_pred eecccccc----hhhhhhcccCCCcEechhhhhh---hcCCceEEeecCCceEEEeeecccccCCCccceeeeehhhhcc
Confidence 99999988 8888876777799999999997 33 233344566655555677888744 236666554433222
Q ss_pred hcCCCCccccc---------------------C-CCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc-
Q 015230 272 VAPAGPMYQAG---------------------T-LSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA- 328 (411)
Q Consensus 272 ~~~~~~~~~~~---------------------t-~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~- 328 (411)
..+....+.++ . .+++.+...+.+..++...+-+ .+.++++.-++...|+.+....
T Consensus 298 ~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~k~~~ 376 (465)
T KOG3846|consen 298 SLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLLKASK 376 (465)
T ss_pred hhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHHHHhc
Confidence 22111111111 1 1333444445556666655422 4555555555555554443211
Q ss_pred ----CC-----------ceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceee---ec
Q 015230 329 ----GH-----------AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT---SL 390 (411)
Q Consensus 329 ----~~-----------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~---~~ 390 (411)
+. +.....+|..+.+.+..+. ..+.+.|.++|+++.....+.+|+ ++
T Consensus 377 g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~---------------~~vfqeL~krGv~~DkR~PNvIRvAPvpL 441 (465)
T KOG3846|consen 377 GYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT---------------PKVFQELHKRGVIGDKRRPNVIRVAPVPL 441 (465)
T ss_pred ccCchhhhcceeEEEeCCcccccccceEEEEeCCCc---------------hHHHHHHHHcCeeccccCCCceEeecchh
Confidence 11 1123345666666664321 578899999999999888888887 68
Q ss_pred CCCHHHHHHHHHHHHHHHHh
Q 015230 391 AHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 391 ~~t~~~i~~~i~~l~~~~~~ 410 (411)
+.+..|+..++..|.+++..
T Consensus 442 YN~f~Dvy~f~n~L~e~~d~ 461 (465)
T KOG3846|consen 442 YNTFSDVYIFVNALNEAMDK 461 (465)
T ss_pred hccHHHHHHHHHHHHHHHHH
Confidence 88999999999999988764
No 370
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.12 E-value=7e-08 Score=88.74 Aligned_cols=311 Identities=12% Similarity=0.007 Sum_probs=176.0
Q ss_pred CcHHHHHHHHHHHHcCCC-------CCCC----CHHHHHHHHHHHhhCC--CCCEEE-EeCChHHHHHHHHHHHHhccCC
Q 015230 53 ADDQVLAALGETMKKGTS-------FGAP----CLLENVLAEMVISAVP--SIEMVR-FVNSGTEACMGVLRLARAFTGR 118 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~-------~~~~----~~~~~~l~~~l~~~~~--~~~~v~-~~~~g~~a~~~al~~~~~~~~~ 118 (411)
.+++|++++.+.+-+... .+.. .+...+..+.|.+.++ ...+|+ +..||+.+.++++.-. ..++
T Consensus 15 lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nl--l~~g 92 (364)
T PRK12462 15 LPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNF--SRPG 92 (364)
T ss_pred CCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHc--CCCC
Confidence 688899999888877322 1111 4445666677777775 223554 5556999999888742 2344
Q ss_pred cEEE-EEeCCcCCCchhhhh-hcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCC
Q 015230 119 ERII-KFEGCYHGHADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 196 (411)
Q Consensus 119 ~~vi-~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~ 196 (411)
++++ +...++.+....-.+ ..| .+..+......++ -.++ +++++ +.. .+...|.+.++...+
T Consensus 93 ~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~--------~~~p--~~~~~----~~~-~d~~~v~~t~NETst 156 (364)
T PRK12462 93 AAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGY--------RTLP--SLAEL----DWD-ARAPFRHYVSNETVE 156 (364)
T ss_pred CcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCC--------CcCC--CHHHh----ccC-CCCcEEEEccCCCCc
Confidence 4454 455555443322222 223 2222211000000 0000 44443 221 246678888888888
Q ss_pred CccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHHHhcCC
Q 015230 197 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 197 G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~~~~~~ 275 (411)
|+..+ ++.+.+++++|+|-+-+ + .+..+.++.| +.-+.+..|.++ +| ++.++.++++++.....
T Consensus 157 Gv~~~---------~~~~~~~~llvvD~sS~-~-~s~pid~~~~--dvi~agsQKnlgP~G--ltvvivs~~al~~~~~~ 221 (364)
T PRK12462 157 GLQFP---------DAAGLPDSPLIADMSSD-F-MSRPFDVEAY--GMVYAHAQKNLGPAG--VTVAIIRRALLERVPDT 221 (364)
T ss_pred eEecC---------cccccCCCeEEEEcCch-h-hCCCCChHHc--cEEEeeccccCCCCc--eEEEEECHHHHhhcccc
Confidence 88875 23334799999998775 1 2233344444 112346789998 23 55678899888776532
Q ss_pred CCcc--------cccC-CCCCHHHHHHHHHHHHHHhcC-----ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc-e
Q 015230 276 GPMY--------QAGT-LSGNPLAMTAGIHTLKRLKEP-----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-M 340 (411)
Q Consensus 276 ~~~~--------~~~t-~~~~~~~~a~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~ 340 (411)
.+.+ ..++ ++++.....+...+++.+.++ ++.++.+++++.+++.+++...-+........+.. -
T Consensus 222 ~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mn 301 (364)
T PRK12462 222 LPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMN 301 (364)
T ss_pred CCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcce
Confidence 2222 1123 366677777888888877544 45556666666666666665211112122222233 2
Q ss_pred EEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCC--Ccceeee--cCCCHHHHHHHHHHHHHHHH
Q 015230 341 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~--~~~~~~~--~~~t~~~i~~~i~~l~~~~~ 409 (411)
+.|.+ .+....+++.+.+.++|+.-..|. -..+|.+ -.++.+.++++++-+++.-+
T Consensus 302 v~f~~-------------~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 302 VAFRF-------------RQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred EEEEc-------------CCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 33333 233445789999999999886653 1236664 46689999999998887654
No 371
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.03 E-value=2.6e-07 Score=90.54 Aligned_cols=138 Identities=16% Similarity=0.155 Sum_probs=95.4
Q ss_pred CCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHHHHHHHHhcc-------C-C--------------------------
Q 015230 74 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT-------G-R-------------------------- 118 (411)
Q Consensus 74 ~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~al~~~~~~~-------~-~-------------------------- 118 (411)
.+..++++.+|+++.++ +...-.||+|||+|+..+|.+||... . .
T Consensus 121 ~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~ 200 (608)
T TIGR03811 121 TSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLES 200 (608)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccc
Confidence 47788999999999997 44456799999999999998887531 0 0
Q ss_pred ---------------------cEEEEEeCCcCCCchhhhhhcCCC---CcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 119 ---------------------ERIIKFEGCYHGHADPFLVKAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 119 ---------------------~~vi~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
..+++.+..-|.+..-++...|-+ ++.++....... |+++|+
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rm--------------d~~~L~ 266 (608)
T TIGR03811 201 AGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRM--------------DINELE 266 (608)
T ss_pred cccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcC--------------CHHHHH
Confidence 003444445455555555555543 334333222222 899999
Q ss_pred HHHHc---CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHH---HHhCC--EEEEecccccc
Q 015230 175 NLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT---KENGA--LLIFDEVMTGF 229 (411)
Q Consensus 175 ~~~~~---~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~---~~~~~--~li~De~~~g~ 229 (411)
+.+++ ....+.+|+..-...+.|.+-| +++|.++| +++|+ ++++|.+|.|+
T Consensus 267 ~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 267 KIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred HHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccch
Confidence 98874 2223556777777777898888 99999998 67898 69999999875
No 372
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.01 E-value=4.7e-08 Score=92.24 Aligned_cols=298 Identities=17% Similarity=0.243 Sum_probs=185.8
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEE-eCChHHHHHHHHHHHHhc-----cCCcEEEEEeCCcCCCchhhhhhcCCCCcccCC
Q 015230 75 CLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 148 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~-~~~g~~a~~~al~~~~~~-----~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~ 148 (411)
.+...+|.++|.++. +.|.+.| -|||.++-.+.|+..|.| .+...|...+-+.||.-.+.+++.|-.+..+.+
T Consensus 581 ~~lf~~Le~~Lc~iT-G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~ 659 (1001)
T KOG2040|consen 581 QQLFTELEKDLCEIT-GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGC 659 (1001)
T ss_pred HHHHHHHHHHhheee-cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeec
Confidence 455566777777666 6676655 457888777777665555 235678888889999888888888876665444
Q ss_pred CCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc--
Q 015230 149 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-- 226 (411)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~-- 226 (411)
.....+ |+.+|++..+++.++.+++++.-. +..|++.+. ++++.++.++||.-|+.|.+.
T Consensus 660 ~~~G~i--------------d~~dLk~kaekh~~~Laa~MvTYP-ST~GvfE~~---i~d~cd~iHehGGQVYlDGANMN 721 (1001)
T KOG2040|consen 660 DANGNI--------------DMVDLKAKAEKHKDNLAALMVTYP-STHGVFEEG---IDDICDIIHEHGGQVYLDGANMN 721 (1001)
T ss_pred cCCCCc--------------cHHHHHHHHHHhhhhhheeEEecc-ccccccccc---HHHHHHHHHhcCCEEEecCCCcc
Confidence 333333 899999999998888888887532 335666543 999999999999999999876
Q ss_pred --ccc-ccccCccccccCCCcchh--hhhhhc----cCCcc-cccccccHHHHHHhcCCCCccc---------ccCCCC-
Q 015230 227 --TGF-RLAYGGAQEYFGVTPDLT--TLGKII----GGGLP-VGAYGGRRDIMEMVAPAGPMYQ---------AGTLSG- 286 (411)
Q Consensus 227 --~g~-~~g~~~~~~~~~~~~d~~--~~sK~~----~~G~~-~g~~~~~~~~~~~~~~~~~~~~---------~~t~~~- 286 (411)
.|+ ++|..++ |+. -+-|.| |||-| +|-+.+.+.+...+.. .+... .++.+.
T Consensus 722 AqVGlc~pGd~Ga--------DV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~-HpVvs~~~~~~~~~~gsVsaa 792 (1001)
T KOG2040|consen 722 AQVGLCRPGDIGA--------DVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPS-HPVVSPGRPEDTSPVGSVSAA 792 (1001)
T ss_pred ceecccCCccccc--------cceeecccceeeecCCCCCCCCCccchhhhccccCCC-CCccCCCCCCCCCCccceecc
Confidence 366 6664332 222 245655 34444 6777677766665542 11110 011111
Q ss_pred ---CHHHHHHHHHHHHHHhcC---ChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccc
Q 015230 287 ---NPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 360 (411)
Q Consensus 287 ---~~~~~a~~~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 360 (411)
+...+....+.++.+... +.-+-..-+++|+.++|+.. |++.. ++...++.-++.- +.++ .+...
T Consensus 793 P~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h---Ykil~--~~~~~~vaHEFIl-D~r~---fK~~a 863 (1001)
T KOG2040|consen 793 PWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH---YKILF--RGENGLVAHEFIL-DLRP---FKKTA 863 (1001)
T ss_pred CCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc---cceeE--ecCCcceeeeeee-echh---hcccc
Confidence 222333445667766553 33344566788888888775 44332 2222355555421 1122 12233
Q ss_pred hHHHHHHHHHHHHcCeEeccCCCcc---eee--ecCCCHHHHHHHHHHHHHHHH
Q 015230 361 TTKFARFYRGMLEEGVYFAPSQFEA---GFT--SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 361 ~~~~~~~~~~l~~~Gi~v~~~~~~~---~~~--~~~~t~~~i~~~i~~l~~~~~ 409 (411)
..++..+++.|.+.|+....-.++. +-+ .-.-+.+++|++++++..+-.
T Consensus 864 gieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIre 917 (1001)
T KOG2040|consen 864 GIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIRE 917 (1001)
T ss_pred CCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHH
Confidence 4556789999999999876654332 333 234577999999999876543
No 373
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.99 E-value=1.9e-07 Score=88.69 Aligned_cols=300 Identities=11% Similarity=0.027 Sum_probs=156.4
Q ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCccc-CCCCC-C
Q 015230 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL-GLPDS-P 152 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~-~ 152 (411)
.....+..+..++.++.....+.+||.|.|+..++. ...++++.|.++...|-+....+.++|..+.++ +.... -
T Consensus 69 ~G~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~---a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 69 EGPIKEAQELAARVFGADHTYFVVNGTSTANKAVIN---AVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred CccHHHHHHHHHHHhCCCceEEEECCccHHHHHHHH---hhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence 344455555555666434456677777777777776 334444555556666666666677777754443 22211 2
Q ss_pred CCCCCCCCceeecCCCCHHHHHHHHHcCCCc-EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc-ccc
Q 015230 153 GVPKGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR 230 (411)
Q Consensus 153 ~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~-~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~-g~~ 230 (411)
+++... +.+.+++.+.+++.. ..+++.+|.+ .|+... +++|.++++++++++.+||+|. -+.
T Consensus 146 gi~ggI----------~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~ 209 (557)
T COG1982 146 GIIGGI----------PLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFD 209 (557)
T ss_pred cccCCC----------CHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCccccc
Confidence 222111 789999888887766 7788888866 688888 9999999999999999999994 111
Q ss_pred cccCccccccCCCcchh--hhhhhccCCccccccccc-------HHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHH
Q 015230 231 LAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGR-------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 301 (411)
Q Consensus 231 ~g~~~~~~~~~~~~d~~--~~sK~~~~G~~~g~~~~~-------~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~ 301 (411)
....+.-.......|++ |.-|.+++.--.+.+..+ +++.+.+. ++. +.+++-..+|..-. .+..
T Consensus 210 ~~~~l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~-----~h~-STSPsY~l~ASlD~-Ar~~ 282 (557)
T COG1982 210 FSPMLPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALM-----MHQ-STSPSYPLMASLDV-ARMQ 282 (557)
T ss_pred ccccCcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHH-----HHc-cCCchHHHHHHHHH-HHHh
Confidence 11111111111223455 455666542224455333 34444443 122 33333333333322 3333
Q ss_pred hc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeee------c---------ceEEEEEecCCCCCcchhcccchHH
Q 015230 302 KE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI------S---------GMFGFFFTEGPVYNFEDAKKSETTK 363 (411)
Q Consensus 302 ~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------g---------~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (411)
.. .++.+..-+..-.+++.+++.....++....... + ..+.+|-.+..+.. ...+..
T Consensus 283 ~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~t-----p~~Gip 357 (557)
T COG1982 283 EGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITT-----PEFGIP 357 (557)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEec-----CCCCCc
Confidence 22 3443333344444444444333333311110000 0 12222221111100 024456
Q ss_pred HHHHHHHHHHcCeEeccCCCcceee---ec-CCCHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFT---SL-AHSSDDIQHTITAAE 405 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~---~~-~~t~~~i~~~i~~l~ 405 (411)
+..+.+.|+++|++..-.+...+.+ +. .....+++.+++.++
T Consensus 358 g~~v~~~L~e~gii~e~~~d~~~lll~~~~~gk~~~lv~~L~~f~r 403 (557)
T COG1982 358 GAIVAKYLREHGIIPEETGDYSNLLLFSPGIGKWQTLVDRLLEFKR 403 (557)
T ss_pred HHHHHHHHHHcCCeeeecCCceeeEEeeeccchHHHHHHHHHHHHH
Confidence 6889999999999988776554432 23 234444555555444
No 374
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.91 E-value=1.2e-07 Score=86.16 Aligned_cols=239 Identities=16% Similarity=0.213 Sum_probs=141.5
Q ss_pred EEEeccCCccccccCC--CcHHHHHHHHHHHHcCCCCC---CCCHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHH
Q 015230 37 EYIDYVGSWGPAIIGH--ADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVL 109 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~--~~~~v~~a~~~~l~~~~~~~---~~~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al 109 (411)
.+++.+...-..++|- -+|++++++.+.+......- .......++...-....+ +.+.++.+|.-+.|+..++
T Consensus 21 ~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~ 100 (395)
T COG1921 21 RVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTL 100 (395)
T ss_pred hhhhhhhhheeccCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhcccchhheeeECCcHHHHHHHH
Confidence 3444444222245554 57899999988888742211 112222222221112222 6788889998888988877
Q ss_pred HHHHhccCCcEEEEEe-C---CcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 110 RLARAFTGRERIIKFE-G---CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 110 ~~~~~~~~~~~vi~~~-~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
- .+..+..+|+.- + ++|......+..+|.+.+..... + .....+++.++.++. ...
T Consensus 101 ~---al~~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n-------------~t~~~d~~~AIne~t-a~l 160 (395)
T COG1921 101 N---ALAEGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---N-------------RTHLKDYELAINENT-ALL 160 (395)
T ss_pred h---hhccCCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---C-------------cCCHHHHHHHhccCC-eeE
Confidence 5 333343444421 1 57777777777777654432111 1 115788888888531 222
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCcchhhhh--hhccCCcccccc
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAY 262 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~ 262 (411)
+-+.+++.+..+.+. ++++.++|++|++++|+|.+-... +. ..-..+.+...+|++++| |.|+| .+.|.+
T Consensus 161 lkV~s~~~~f~~~l~-----~~~l~~ia~~~~lpvivD~aSg~~v~~-e~~l~~~la~GaDLV~~SgdKllgG-PqaGii 233 (395)
T COG1921 161 LKVHSSNYGFTGMLS-----EEELVEIAHEKGLPVIVDLASGALVDK-EPDLREALALGADLVSFSGDKLLGG-PQAGII 233 (395)
T ss_pred EEEeecccccccccc-----HHHHHHHHHHcCCCEEEecCCcccccc-ccchhHHHhcCCCEEEEecchhcCC-CccceE
Confidence 233334333344443 889999999999999999988533 21 111122234567888877 66664 457888
Q ss_pred cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhcCC
Q 015230 263 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 305 (411)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~ 305 (411)
++++++++.+.... ..-.+-......++..++++.+...+
T Consensus 234 ~GkKelI~~lq~~~---l~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 234 VGKKELIEKLQSHP---LKRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred echHHHHHHHHhhh---hhhhhhcCcHhHHHHHHHHHHHcCch
Confidence 99999999887422 22244556677788888888887743
No 375
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.80 E-value=3.6e-07 Score=83.53 Aligned_cols=334 Identities=15% Similarity=0.131 Sum_probs=180.4
Q ss_pred cCCCEEEeccCCccccccCCCcHHHHHHHHHHHHcC-----CCCCCCCHHHHHHHHHHHhhCCCCCEE--EEeCChHHHH
Q 015230 33 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAVPSIEMV--RFVNSGTEAC 105 (411)
Q Consensus 33 ~~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~~v--~~~~~g~~a~ 105 (411)
.||+.-....++. .+++ +++..+-+.+.+... ..++.......+....++..+.+++.. .-|.||||+.
T Consensus 76 ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 76 LDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred cCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 3555333434442 5666 555555555555541 134556777888999999998743333 4667899997
Q ss_pred HHHHHHHHhcc----C-CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC
Q 015230 106 MGVLRLARAFT----G-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180 (411)
Q Consensus 106 ~~al~~~~~~~----~-~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~ 180 (411)
.++.+..+-.. + ...-++....-|..+..+...-+-.+..+ +...+ .+.+ |+..+.+.++
T Consensus 152 l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V--~~~~~--------~~~~---D~~k~~~~i~-- 216 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREV--PLDEG--------DYRV---DPGKVVRMID-- 216 (491)
T ss_pred HHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEee--ecccc--------ceEe---cHHHHHHHhc--
Confidence 77776432211 1 11223333333332222211111111111 11111 1111 7888888877
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEecccccc-ccccCccccccCCC-cchhh---hh-h-h
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVMTGF-RLAYGGAQEYFGVT-PDLTT---LG-K-I 252 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~-~~~~li~De~~~g~-~~g~~~~~~~~~~~-~d~~~---~s-K-~ 252 (411)
+++.+++.+-.+...|.+-+ +++|.++..+ +++++.+|.+-.|| -+-.......|++. |-+.+ -+ | +
T Consensus 217 -eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYG 291 (491)
T KOG1383|consen 217 -ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYG 291 (491)
T ss_pred -cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeeccceee
Confidence 46788888877777888888 9999999999 99999999999998 54111222234432 32222 22 3 3
Q ss_pred cc-CCcccccc-cccHHHH-HHhcC---C-CC-----cccccCCCCCHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHH
Q 015230 253 IG-GGLPVGAY-GGRRDIM-EMVAP---A-GP-----MYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELT 318 (411)
Q Consensus 253 ~~-~G~~~g~~-~~~~~~~-~~~~~---~-~~-----~~~~~t~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~~ 318 (411)
+. .| +||+ ..++++. +++.. . .. .+.++..+.+..+|.++.-.+ -++ .+..+++.+..+.++
T Consensus 292 l~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~l--G~eGY~~~~~~ive~~~~l~ 367 (491)
T KOG1383|consen 292 LAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSL--GEEGYRENTQNIVETARKLR 367 (491)
T ss_pred eeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHH
Confidence 33 22 6777 3444432 22221 0 11 111222233334444443222 222 456677888899999
Q ss_pred HHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcc---eeeecCCCHH
Q 015230 319 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---GFTSLAHSSD 395 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~---~~~~~~~t~~ 395 (411)
+.++++ +.+... +. ..+.|...+.. ..+.-++.+.|.++|-.+..-..+. +++...+..+
T Consensus 368 egie~i----~~i~i~-gk-p~vs~~~~~s~-----------~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~ 430 (491)
T KOG1383|consen 368 EGIENI----KGIKIV-GK-PLVSFILFGSN-----------DVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHARE 430 (491)
T ss_pred Hhhhcc----ccceec-CC-CcEEEEEccCC-----------ccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccH
Confidence 999885 222111 11 33444433221 1223678999999998887654332 4444444444
Q ss_pred H-HHHHHHHHHHHHHhC
Q 015230 396 D-IQHTITAAEKVLRQI 411 (411)
Q Consensus 396 ~-i~~~i~~l~~~~~~~ 411 (411)
+ .++++.-|++++.++
T Consensus 431 ~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 431 DVADRFVADIRKVVEEL 447 (491)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 4 688888888887653
No 376
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.77 E-value=5.9e-06 Score=75.14 Aligned_cols=322 Identities=14% Similarity=0.164 Sum_probs=172.5
Q ss_pred EEEeccCCccccccCCCcHHHHH-HHHHHHHcCCCCC-CCCH-------HHHHHHHHHHhhCC-CCCEEEEeCChHHHHH
Q 015230 37 EYIDYVGSWGPAIIGHADDQVLA-ALGETMKKGTSFG-APCL-------LENVLAEMVISAVP-SIEMVRFVNSGTEACM 106 (411)
Q Consensus 37 ~~~d~~~~~~~~~~g~~~~~v~~-a~~~~l~~~~~~~-~~~~-------~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~ 106 (411)
.+..|++. .++++--|.++. .+.+--.=++.|. |.++ ..-.+...++++.+ +-.+...-.++|.+-|
T Consensus 75 ~~~sfiG~---GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE 151 (450)
T COG0403 75 VFTSFIGA---GYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE 151 (450)
T ss_pred hhhhhccC---cccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHHHH
Confidence 44556655 888884444433 5544322122232 2222 22334444555555 4445555566777777
Q ss_pred HHHHHHHhccC-CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 107 GVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 107 ~al~~~~~~~~-~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
+++.+-+...+ +.++++. ..-|-.+...+... ....+..+...+++|.+++++. + ...+.
T Consensus 152 Am~ma~r~~k~k~~~~~V~-~~vhpqt~~Vl~Tr---------------a~~~g~~i~~~~~~d~~~l~~~-~--~~~~~ 212 (450)
T COG0403 152 AMLMAKRVTKKKRNKFLVP-KDVHPQTLDVLRTR---------------AEGLGIEIEVVDADDLDDLESA-D--DGDVF 212 (450)
T ss_pred HHHHHHHhhcCcCceEEec-CCCCHHHHHHHHhh---------------cccCceEEEEeccchhhhhhhc-c--ccCeE
Confidence 77654433333 4555554 44443433332221 1112335666777788888877 3 24788
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE--Eecccccc--ccccCccccccCCCcchh-----hhhhhcc-C
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI--FDEVMTGF--RLAYGGAQEYFGVTPDLT-----TLGKIIG-G 255 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li--~De~~~g~--~~g~~~~~~~~~~~~d~~-----~~sK~~~-~ 255 (411)
+++++-++..|....+ +++|.+.++++|.+++ +|=.--++ .+|.+++ ||+ .|+=.++ |
T Consensus 213 gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GA--------DIvvG~~QrfGvPmgfG 280 (450)
T COG0403 213 GVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLKPPGEFGA--------DIVVGSAQRFGVPMGFG 280 (450)
T ss_pred EEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccCCccccCC--------ceEEecCcccCCCcCCC
Confidence 8888876655546656 9999999999998766 44444344 3333322 332 2444555 4
Q ss_pred CcccccccccHHHHHHhcC----------CCC---------------cccccCCCCCHHHHHHHHHHH-HHHhc---CCh
Q 015230 256 GLPVGAYGGRRDIMEMVAP----------AGP---------------MYQAGTLSGNPLAMTAGIHTL-KRLKE---PGT 306 (411)
Q Consensus 256 G~~~g~~~~~~~~~~~~~~----------~~~---------------~~~~~t~~~~~~~~a~~~~~l-~~~~~---~~~ 306 (411)
|--.|++.++++....+.- .++ -...+..+.++.-+|.+.+.. -.+.. .++
T Consensus 281 GPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~i 360 (450)
T COG0403 281 GPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEI 360 (450)
T ss_pred CcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 5447777777766544421 000 001112223333233222222 22222 456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcce
Q 015230 307 YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 386 (411)
Q Consensus 307 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 386 (411)
..++.++..++.++|++.. ....+....+|--+.+.- +. ..+..+.++....|+-+.......+
T Consensus 361 A~r~~~~a~~la~~L~~~~----~g~~~~~~~fFdt~~v~~-----------~~-~~~~~l~~~~~~~G~~L~~~~~~~~ 424 (450)
T COG0403 361 AERIHRLAAYLAAGLKEIG----AGVELVFDHFFDTFTVRV-----------PE-EVAEALLAAAIAGGINLRRVDADTV 424 (450)
T ss_pred HHHHHHHHHHHHHHHhhcC----CceEeccccceeeEEEec-----------ch-hHHHHHHHHHHhcCCceeeecCCce
Confidence 6777788888888887652 111111113332332211 21 3456777787888888877655554
Q ss_pred ee--ecCCCHHHHHHHHHHHHHHH
Q 015230 387 FT--SLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 387 ~~--~~~~t~~~i~~~i~~l~~~~ 408 (411)
.+ .-.+|+++|+.+++.+....
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred EEEeecccCHHHHHHHHHHHhhhc
Confidence 44 45678999999999987653
No 377
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.72 E-value=9.4e-09 Score=92.39 Aligned_cols=226 Identities=19% Similarity=0.267 Sum_probs=53.5
Q ss_pred cccCC--CcHHHHHHHHHHHHcCCCCCC------CCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 015230 48 AIIGH--ADDQVLAALGETMKKGTSFGA------PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 119 (411)
Q Consensus 48 ~~~g~--~~~~v~~a~~~~l~~~~~~~~------~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~ 119 (411)
.++|- .++++.+++.+.+..+...-| .......+.+.++ .+.+.+..+++|+...|+..++. .+..+.
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~-~ltgAeaA~VvNnnaAAv~L~l~---~la~~~ 86 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLC-ELTGAEAALVVNNNAAAVLLALN---TLAKGK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc---cccccc
Confidence 45554 457788888777666322111 1111223333333 33378888898888889988776 333344
Q ss_pred EEEEEeCCc---CC--CchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEE-EcccC
Q 015230 120 RIIKFEGCY---HG--HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII-LEPVV 193 (411)
Q Consensus 120 ~vi~~~~~~---~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi-~~~~~ 193 (411)
.||+.-+-- .| +....+..+|.....+. ......++++++++. +++++++ +.+.|
T Consensus 87 EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVG----------------ttN~t~~~Dye~AI~---e~Ta~ll~Vh~Sn 147 (367)
T PF03841_consen 87 EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVG----------------TTNRTHLSDYEKAIT---ENTAALLKVHTSN 147 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccc----------------ccccccccccccccc---ccccccccccccc
Confidence 444432211 11 11222222332111111 011114677888887 4566654 33333
Q ss_pred C-CCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-c---cc---cCccccccCCCcchhhhh--hhccCCccccccc
Q 015230 194 G-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R---LA---YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYG 263 (411)
Q Consensus 194 ~-~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~---~g---~~~~~~~~~~~~d~~~~s--K~~~~G~~~g~~~ 263 (411)
. ..|...... ++++.+++++|++++|+|-.-..+ . .| .....+......|++||| |.++| --.|.++
T Consensus 148 ~~i~GFt~~~~--~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQaGiI~ 224 (367)
T PF03841_consen 148 FRIQGFTGEVS--LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQAGIIV 224 (367)
T ss_dssp ---------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-EEEE
T ss_pred ccccccccccc--HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CCeEEEE
Confidence 2 233333323 999999999999999999877322 1 11 222333344567899888 66665 2277889
Q ss_pred ccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHh
Q 015230 264 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 302 (411)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~ 302 (411)
+.+++++.++.. -....+...-...++..++++.+.
T Consensus 225 Gkk~lI~~lk~~---pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 225 GKKELIEKLKKH---PLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EEHHHHHHHHHH---HHTTT-B--HHHHHHHHHHHHH--
T ss_pred eCHHHHHHHhhC---CCcceEeeCHHHHHHHHHHHHHHH
Confidence 999999998731 123345556677888888887655
No 378
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.69 E-value=4.3e-05 Score=67.92 Aligned_cols=347 Identities=14% Similarity=0.101 Sum_probs=180.0
Q ss_pred CCCEEEeccCCccccccCCCcHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHH
Q 015230 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 113 (411)
Q Consensus 34 ~g~~~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~ 113 (411)
.+..++|+++-.| .|-....--.++..-=+ .|. .+.....|++...+.+ +.+.++.|.-|-.|-...+..+.
T Consensus 44 Sedv~IDLLTDSG---Tgams~~qwaamm~GDE---AYa-gsrs~~~L~~avkdif-Gfq~~iPthQGRgAE~Il~~i~i 115 (471)
T COG3033 44 SEDVFIDLLTDSG---TGAMTDKQWAAMMRGDE---AYA-GSRSYYALADAVKDIF-GFQYTIPTHQGRGAENILIPILI 115 (471)
T ss_pred ccceEEEeeccCC---cccccHHHHHHHhccch---hhc-ccccHHHHHHHHHHhc-CceeeeeccCCccHHHHHHHHHh
Confidence 4567899988743 33223333333332211 232 2344567777777777 57888889887766655554433
Q ss_pred h---ccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC---CHHHHHHHHHcC-CCcEEE
Q 015230 114 A---FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN---DVSALENLFENN-KGEIAA 186 (411)
Q Consensus 114 ~---~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~~l~~~~~~~-~~~~~~ 186 (411)
+ ..++.+.+++++.|.-.+.+-....|.-+.-++.+.... ..+..|+. |++.|++.+++- .+++..
T Consensus 116 k~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d-------~~~~~pFKGd~D~~kLe~lidevG~~nvp~ 188 (471)
T COG3033 116 KKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFD-------TEVKYPFKGNFDLEKLERLIDEVGADNVPY 188 (471)
T ss_pred hhccccCCccccccccceecchhHHHHhcCCcccccccccccc-------ccccCCCCCccCHHHHHHHHHHhCcccCcE
Confidence 3 223455666666666555555555554333222221111 11111111 899999999974 345666
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc----cc-ccccCccccccCC---C------cchhhhh--
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT----GF-RLAYGGAQEYFGV---T------PDLTTLG-- 250 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~----g~-~~g~~~~~~~~~~---~------~d~~~~s-- 250 (411)
|++.-.+|+-|..+-+-+-+++++++|++|+++++.|.+.. -| ...... ...|.+ . .|-.++|
T Consensus 189 I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~g-Yrd~sI~~IarEm~sYaD~~~mS~K 267 (471)
T COG3033 189 IVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPG-YRDWSIEEIAREMYSYADGCTMSAK 267 (471)
T ss_pred EEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcc-cccccHHHHHHHHHhhhhhheeecc
Confidence 66665555655566666669999999999999999998873 22 111100 111111 1 1122222
Q ss_pred h-hccCCcccccc-cccHH----HHHHhcCCCCccc-ccCCCC-CHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Q 015230 251 K-IIGGGLPVGAY-GGRRD----IMEMVAPAGPMYQ-AGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGII 322 (411)
Q Consensus 251 K-~~~~G~~~g~~-~~~~~----~~~~~~~~~~~~~-~~t~~~-~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~ 322 (411)
| ++. .+|.+ +.+.+ +....+......- ..|+++ ..-.+.+....|..-.+.+.+++-.+..+|+.+.|+
T Consensus 268 KD~lv---nmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~ 344 (471)
T COG3033 268 KDGLV---NMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLE 344 (471)
T ss_pred cccee---ccccEEEecCccHHHHHHHHHhheEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 2 333 36655 45544 4444432111111 112221 111222222233322235555666666778888888
Q ss_pred HHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchH-HHHHHHHHH-HHcCeEeccCCC-----------------
Q 015230 323 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT-KFARFYRGM-LEEGVYFAPSQF----------------- 383 (411)
Q Consensus 323 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l-~~~Gi~v~~~~~----------------- 383 (411)
+. +.+..-+..|.-+.++..+.- +.+ |.+. -++.++-.| ++-||-..--+.
T Consensus 345 ~~----GVpi~~paGGHavfvda~~~l-phi-----p~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~ 414 (471)
T COG3033 345 EA----GVPIVQPAGGHAVFVDAGKFL-PHI-----PAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPA 414 (471)
T ss_pred hc----CCeeEecCCCceEEeehhhhc-CCC-----ChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCch
Confidence 76 554444555777777754321 011 1111 124444444 455776533210
Q ss_pred cceee--e-cCCCHHHHHHHHHHHHHHHH
Q 015230 384 EAGFT--S-LAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 384 ~~~~~--~-~~~t~~~i~~~i~~l~~~~~ 409 (411)
..+|+ | ..-|.+++|..++.++++.+
T Consensus 415 elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 415 ELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred heeeEeccccccchhHHHHHHHHHHHHHh
Confidence 11454 4 45588999999999988764
No 379
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.69 E-value=1.7e-06 Score=78.17 Aligned_cols=310 Identities=13% Similarity=0.093 Sum_probs=162.1
Q ss_pred HHHHHHHHhhCC-CC-CEEEEeCChHHHHHHHHHHHHhc--c---------CCcEEEEEeCCcCCCchhhhhhcCCC---
Q 015230 79 NVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARAF--T---------GRERIIKFEGCYHGHADPFLVKAGSG--- 142 (411)
Q Consensus 79 ~~l~~~l~~~~~-~~-~~v~~~~~g~~a~~~al~~~~~~--~---------~~~~vi~~~~~~~~~~~~~~~~~g~~--- 142 (411)
.++-..+.+..+ .. .+-+|++||+-++..++..++-- + -++-|+..+...|-+...+++..|-+
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~ 223 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDH 223 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCce
Confidence 444444555555 22 58899999999999999877421 1 02334444445555555555555532
Q ss_pred CcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCc---EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCE
Q 015230 143 VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGAL 219 (411)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~---~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~ 219 (411)
+..+........ ++++||+.|.+...+ +..+-++.....-|.+-| ++.|+++|.+|+++
T Consensus 224 c~~v~t~e~Gkm--------------~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadiC~k~~lW 285 (510)
T KOG0629|consen 224 CIKVKTDERGKM--------------IPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADICEKHKLW 285 (510)
T ss_pred eEEecccccCcc--------------chHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHHHHhcCEE
Confidence 333222222222 689999888764323 455555554444688878 99999999999999
Q ss_pred EEEeccccc-c-ccccCccccccCCC-cchhh--hhhhccCCcccccccccHH-HHHHhcCCCC--------cccccCCC
Q 015230 220 LIFDEVMTG-F-RLAYGGAQEYFGVT-PDLTT--LGKIIGGGLPVGAYGGRRD-IMEMVAPAGP--------MYQAGTLS 285 (411)
Q Consensus 220 li~De~~~g-~-~~g~~~~~~~~~~~-~d~~~--~sK~~~~G~~~g~~~~~~~-~~~~~~~~~~--------~~~~~t~~ 285 (411)
+++|.+..| + -....-. ...|+. .+-++ --|.+++.+..|....+.+ +++.-++... .|..+--+
T Consensus 286 mHvDAAwGGglLmS~k~R~-kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DT 364 (510)
T KOG0629|consen 286 MHVDAAWGGGLLMSRKHRH-KLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDT 364 (510)
T ss_pred EEeecccccccccChhhHh-hccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeeccccc
Confidence 999999974 3 1111100 122333 23333 3588888888887766543 4444433222 12111111
Q ss_pred CC-HHHHHHHHHHHHH---Hhc------CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcch
Q 015230 286 GN-PLAMTAGIHTLKR---LKE------PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 355 (411)
Q Consensus 286 ~~-~~~~a~~~~~l~~---~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 355 (411)
++ .+.|-.-.-.++. +.. ++.+++.-++++|+.++|++.... -...+..+.-.-+.+.+..+..+....
T Consensus 365 gdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~-~~l~~~~pe~~nv~fw~vp~~lR~~~~ 443 (510)
T KOG0629|consen 365 GDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGF-EMLFELEPEHVNVCFWYVPPSLRGWQE 443 (510)
T ss_pred ccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccc-eehhcCCCceEEEeeccCchHhccCcc
Confidence 11 1111100111111 111 566788889999999999886321 111111111111122111111221111
Q ss_pred hcccchH-----HHHHHHHHHHHcCeEec---cCC--Ccceee---ecCCCHHHHHHHHHHHHHHHHh
Q 015230 356 AKKSETT-----KFARFYRGMLEEGVYFA---PSQ--FEAGFT---SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 356 ~~~~~~~-----~~~~~~~~l~~~Gi~v~---~~~--~~~~~~---~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
. ++.+ -+-.+-..+.++|-... |.+ .+.+|+ +.+.+.+++|-+++.|.++-+.
T Consensus 444 ~--~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629|consen 444 N--PERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred c--chhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhccC
Confidence 0 1111 12244455666665442 222 233454 5688999999999998876543
No 380
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.64 E-value=5.6e-06 Score=84.45 Aligned_cols=310 Identities=9% Similarity=0.077 Sum_probs=164.4
Q ss_pred EEeccCCccccccCC-CcHHHHHHHHHHH---HcCCCCC-----CCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 38 YIDYVGSWGPAIIGH-ADDQVLAALGETM---KKGTSFG-----APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~-~~~~v~~a~~~~l---~~~~~~~-----~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
+..|+.. .+++| -+|.+.+.+.+.- ....+|+ +.-+..-++...++++.+ +..+..+..+++.+.++
T Consensus 65 ~~~fig~---G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa 141 (939)
T TIGR00461 65 FKSYIGM---GYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEA 141 (939)
T ss_pred ccccCCC---CcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHH
Confidence 3455554 66677 5666665665432 2222332 113334566666777775 55566788888888886
Q ss_pred HHHHHHhcc-CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEE
Q 015230 108 VLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186 (411)
Q Consensus 108 al~~~~~~~-~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 186 (411)
+++..+... ++++|++.+..++.. ...+...-. . .+.+++.+ |++++++.+ ++++
T Consensus 142 ~~~a~~~~~~~~~~vlv~~~~hP~~-~~v~~t~a~---------~------~g~~v~~~---~~~~l~~~~-----~~~~ 197 (939)
T TIGR00461 142 MALSFNVSKKKANKFFVAKDLHPQT-KSVLHTRAK---------P------FGIEVIVV---DCSDIKKAV-----DVFG 197 (939)
T ss_pred HHHHHHhhcCCCCEEEECCCCCcch-HHHHHHHHH---------h------cCcEEEEE---cHHHHhhcC-----CEEE
Confidence 665433222 236676766666532 221111100 0 11123333 555555443 3555
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc---cc-ccccCccccccCCCcchh-hhhhhc----cCCc
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT---GF-RLAYGGAQEYFGVTPDLT-TLGKII----GGGL 257 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~---g~-~~g~~~~~~~~~~~~d~~-~~sK~~----~~G~ 257 (411)
+++. ..+..|.+.+ +++|.++++++|.+++++--.. .+ ++|.+ |. |++ ..+|.| +.|-
T Consensus 198 v~~q-~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~------Ga--Di~vg~~q~fg~p~g~GG 264 (939)
T TIGR00461 198 CLLQ-YPATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTPPGHY------GA--DIVLGSSQRFGVPMGYGG 264 (939)
T ss_pred EEEE-CCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCCHHHc------CC--cEEeeCCCccCCCCCCCC
Confidence 5553 3344677776 9999999999999999865443 12 33332 22 443 233433 3233
Q ss_pred c-cccccccHHHHHHhcCC----------CCcc---------------cccCCCCCHHHHHH-HHHHHHHHhc---CChH
Q 015230 258 P-VGAYGGRRDIMEMVAPA----------GPMY---------------QAGTLSGNPLAMTA-GIHTLKRLKE---PGTY 307 (411)
Q Consensus 258 ~-~g~~~~~~~~~~~~~~~----------~~~~---------------~~~t~~~~~~~~a~-~~~~l~~~~~---~~~~ 307 (411)
| .|++.+++++...+... ++.+ ..+....++..++. +...+..+.. +++-
T Consensus 265 P~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA 344 (939)
T TIGR00461 265 PHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIA 344 (939)
T ss_pred CceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHH
Confidence 4 77778887777665410 0000 00011112222221 1112333333 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCccee
Q 015230 308 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 387 (411)
Q Consensus 308 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~ 387 (411)
+++..+..++.+.|++...+ .. .. .+|-.+.+.- + ...++++.+.+.++||.+.....+.++
T Consensus 345 ~~~~~~a~~l~~~L~~~G~~--~~---~~-~fF~~~~v~~-----------~-~~~~~~i~~~~~~~gi~l~~~~~~~i~ 406 (939)
T TIGR00461 345 RRIHSLTSILANGLENDPHE--LI---NK-TWFDTLTVKV-----------G-NGISSELLKAAEEFNINLRAVDTTTVG 406 (939)
T ss_pred HHHHHHHHHHHHHHHhCCCc--cc---CC-CccceEEEEe-----------C-CCCHHHHHHHHHHCCCeeeecCCCEEE
Confidence 66777777888888764211 11 11 2222222211 0 012478999999999998876555554
Q ss_pred e--ecCCCHHHHHHHHHHHH
Q 015230 388 T--SLAHSSDDIQHTITAAE 405 (411)
Q Consensus 388 ~--~~~~t~~~i~~~i~~l~ 405 (411)
+ .-..|++||+.+++.+.
T Consensus 407 ~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 407 IALDETTTKADVENLLKVFD 426 (939)
T ss_pred EEeecCCCHHHHHHHHHHhc
Confidence 4 57889999999999984
No 381
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.64 E-value=2e-06 Score=78.30 Aligned_cols=300 Identities=12% Similarity=0.035 Sum_probs=151.5
Q ss_pred HHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHH-HHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCC
Q 015230 79 NVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRL-ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 155 (411)
Q Consensus 79 ~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~-~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 155 (411)
..+...+.+..| ....++.++-+| ++.+++.+ +....+..+.++.+.--|-...-+....|..+..++.....
T Consensus 59 n~l~~d~~~~~G~~~~~~~~~vP~at-gm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~--- 134 (389)
T PF05889_consen 59 NSLVLDALRLAGLRSVKSCFVVPMAT-GMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEG--- 134 (389)
T ss_dssp HHHHHHHHHHTTHTTHCEEEEESS-H-HHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEET---
T ss_pred HHHHHHHHHHcCCccccceEEEeccc-ccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCC---
Confidence 344445555666 456677777444 44444432 22223344445544444444444445555544443321111
Q ss_pred CCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-cc--c
Q 015230 156 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL--A 232 (411)
Q Consensus 156 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~--g 232 (411)
+.... |.+.+++.+++...+..+.++.......+..++ . +++|+++|++||++.++..+|+ + .. -
T Consensus 135 -----d~l~t---d~~~ie~~i~~~G~~~iLcvltttscfapr~~D-~--i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~ 202 (389)
T PF05889_consen 135 -----DELIT---DLEAIEAKIEELGADNILCVLTTTSCFAPRLPD-D--IEEIAKICKEYDIPHLVNNAYG-VQSSKCM 202 (389)
T ss_dssp -----TEEEE---HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHH
T ss_pred -----Ceeec---cHHHHHHHHHHhCCCCeEEEEEecCccCCCCCc-c--HHHHHHHHHHcCCceEEccchh-hhHHHHH
Confidence 11112 688899998875445455555555544454443 2 9999999999999999999995 2 00 0
Q ss_pred -cCccccccCCCcc-hhhhhhhccCCccccc-c--cccHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--CC
Q 015230 233 -YGGAQEYFGVTPD-LTTLGKIIGGGLPVGA-Y--GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PG 305 (411)
Q Consensus 233 -~~~~~~~~~~~~d-~~~~sK~~~~G~~~g~-~--~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--~~ 305 (411)
..-.....|..|. +=++.|-|-- |+|. + ...+..+..+....+...+.+ + ..-.....+.+-.. ..
T Consensus 203 ~~i~~a~~~GRvda~vqS~dkNF~V--PvGgai~As~~~~~i~~vs~~YpGRas~s---p--~ld~~itLl~LG~~g~~~ 275 (389)
T PF05889_consen 203 HLIQQAWRVGRVDAFVQSTDKNFMV--PVGGAIMASFDPSGILAVSKEYPGRASAS---P--SLDLFITLLSLGCTGYGA 275 (389)
T ss_dssp HHHHHHHHHSTCSEEEEEHHHHHCE--ESSHEEEEESSHHHHHHHHHTSHSHBTSH---H--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceeeeecCCCEEe--cCCCcEEEecCHHHHHHHHHHhhhhhhcc---c--chHHHHHHHHHhhhHHHH
Confidence 0000001233333 3367786642 2332 2 234566666654322222211 1 12222222222222 56
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCc-eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEec----c
Q 015230 306 TYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----P 380 (411)
Q Consensus 306 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~ 380 (411)
+.....+...++.++|+++..+++.. .+.+..-..+.+.+.... . ....+...+...|..+||.-. +
T Consensus 276 ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~------~~~k~~~~lgs~Lf~R~VsG~RvV~~ 347 (389)
T PF05889_consen 276 LLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--E------ISQKDGTFLGSMLFKRGVSGIRVVTP 347 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T------CCSSHHHHHHHHHHHTTEESSEEEET
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--h------hccchhhhHHHHHHhCCcccceeecc
Confidence 67778888899999999988777622 122222334455553211 1 011344789999999976432 2
Q ss_pred CCC-----------cceee--ecCCCHHHHHHHHHHHHHHHH
Q 015230 381 SQF-----------EAGFT--SLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 381 ~~~-----------~~~~~--~~~~t~~~i~~~i~~l~~~~~ 409 (411)
... +.+.+ ...++++|+|.++++|+++++
T Consensus 348 ~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 348 GGKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 211 11333 367799999999999999874
No 382
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.63 E-value=2.7e-05 Score=69.76 Aligned_cols=281 Identities=20% Similarity=0.169 Sum_probs=140.6
Q ss_pred cHHHHHHHHHHHHc------CCCCCCCCHHHHHHHHHHHhhCCCCCEEEEe---CChHHHHHHHHHHHHhccCCcEEEEE
Q 015230 54 DDQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVRFV---NSGTEACMGVLRLARAFTGRERIIKF 124 (411)
Q Consensus 54 ~~~v~~a~~~~l~~------~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~---~~g~~a~~~al~~~~~~~~~~~vi~~ 124 (411)
..+|++|+.+.=-. .++|+|-+.-++.+.+-+++.++ .++.++= .|||.|+..+|.. .+.+++.++..
T Consensus 26 q~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vfg-aE~ALVRpq~vSGTHAi~~~Lfg--~LrpGD~ll~~ 102 (403)
T PF06838_consen 26 QLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVFG-AEDALVRPQFVSGTHAIALALFG--VLRPGDELLSI 102 (403)
T ss_dssp HHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHCT--SEEEEETTS-SHHHHHHHHHHH--H--TT-EEEES
T ss_pred HHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHhC-chhhhhcccccchHHHHHHHHHh--cCCCCCeEEEc
Confidence 44566666542111 13567778888999999999994 4444432 3799999999974 34466666665
Q ss_pred eCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCC-----CCHHHHHHHHHcCCCcEEEEEEcccCCCCCcc
Q 015230 125 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEPVVGNSGFI 199 (411)
Q Consensus 125 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~ 199 (411)
.+.=+-......-..|.+ .+.....+.....++. -|++.+++.++ .+++++++.-.-+-.---
T Consensus 103 tG~PYDTL~~VIG~~g~~---------~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~---~~tk~v~IQRSrGYs~R~ 170 (403)
T PF06838_consen 103 TGKPYDTLEEVIGIRGNG---------PGSLKEFGIKYREVPLTEDGTIDWEAIKKALK---PNTKMVLIQRSRGYSWRP 170 (403)
T ss_dssp SSS--CCHHHHHTSSSSS---------SSSTGGGT-EEEE--B-TTSSB-HHHHHHHHH---TTEEEEEEE-S-TTSSS-
T ss_pred CCCchhhHHHHhCCCCCC---------CCChHHhCceeEEEeecCCCCcCHHHHHHhhc---cCceEEEEecCCCCCCCC
Confidence 543222333333333321 1111111111222221 17999999998 478888886532221111
Q ss_pred CCCHHHHHHHHHHHHHh--CCEEEEecccccc-ccccCccccccCCCcch--hhhhhhccCCc-c-cccccccHHHHHHh
Q 015230 200 APKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDL--TTLGKIIGGGL-P-VGAYGGRRDIMEMV 272 (411)
Q Consensus 200 ~~~~~~l~~i~~l~~~~--~~~li~De~~~g~-~~g~~~~~~~~~~~~d~--~~~sK~~~~G~-~-~g~~~~~~~~~~~~ 272 (411)
..+-+.++++.+..++. ++++++|.+|..| ..-.+. .+..|+ .|+=|-.+||+ | -||+++++++++..
T Consensus 171 sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~-----~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~ 245 (403)
T PF06838_consen 171 SLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPT-----EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERA 245 (403)
T ss_dssp ---HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GG-----GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCcc-----ccchhheeccceeCCCCCccCcCCEEechHHHHHHH
Confidence 22333466666666664 7899999999877 332221 233454 48889999995 5 56789999998876
Q ss_pred cC-----CCCcccccCCCCCHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHhc-CCceEEeeecceEEEEEe
Q 015230 273 AP-----AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFFFT 346 (411)
Q Consensus 273 ~~-----~~~~~~~~t~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~~~~~~~~ 346 (411)
.. .-..-.+.|++.+... .+.+ ...+.......+-.......++++..+. |.+.+ ...-.+-.+.+
T Consensus 246 a~RLTaPGiG~e~G~t~~~~R~~----~QGl--FlAP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~-~R~DiIQai~l- 317 (403)
T PF06838_consen 246 AYRLTAPGIGKEVGATLGTNRLM----FQGL--FLAPHVVGEALKGAIFAAALFEKLGFEVSPKPDD-PRSDIIQAIEL- 317 (403)
T ss_dssp HHHHS-TTTGGGSS--TTTHHHH----HHHH--HHHHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS---SSS-EEEE--
T ss_pred HhhhcCCccccccccCcchHHHH----HhHH--hhchHHHHHHHHHHHHHHHHHHHcCCcCCCCCCC-CCCceEEEEEC-
Confidence 41 1111122233222111 1111 1114455555666666666667664321 11111 22244555555
Q ss_pred cCCCCCcchhcccchHHHHHHHHHHHHc
Q 015230 347 EGPVYNFEDAKKSETTKFARFYRGMLEE 374 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 374 (411)
.+.+....+++...+.
T Consensus 318 ------------~~~e~l~~FC~~iQ~~ 333 (403)
T PF06838_consen 318 ------------GSPEKLIAFCQGIQAA 333 (403)
T ss_dssp ------------SSHHHHHHHHHHHHHT
T ss_pred ------------CCHHHHHHHHHHHHhc
Confidence 3455667888887765
No 383
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.62 E-value=5.6e-07 Score=79.65 Aligned_cols=260 Identities=11% Similarity=0.037 Sum_probs=139.8
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhc---c-CCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecC
Q 015230 91 SIEMVRFVNSGTEACMGVLRLARAF---T-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 166 (411)
Q Consensus 91 ~~~~v~~~~~g~~a~~~al~~~~~~---~-~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (411)
....|+|.+|+++.+.+|+-.+-.. . ++-+|+...|-|. .+.... ..+..- .+...
T Consensus 65 ~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~-~Y~~qt------------~~f~s~-------~y~w~ 124 (363)
T PF04864_consen 65 DGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYS-SYPEQT------------DFFDSR-------LYKWA 124 (363)
T ss_dssp TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--C-HHHHHC------------CCT-BT-------TEEEE
T ss_pred cCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCcc-chHHHH------------Hhcccc-------Ccccc
Confidence 3568999999999999998643222 1 2334555444443 222111 001100 00000
Q ss_pred CCCHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCCc
Q 015230 167 FNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 244 (411)
Q Consensus 167 ~~d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~~ 244 (411)
- |..... .. .++...=+++.|+|+-|. +.. .+++.-+..+|.|-+|-.= .+.-... .+-
T Consensus 125 G-da~~~~---~~~~~~~~IElVTSPNNPDG~-lr~---------~V~~g~~~k~I~D~AYYWPhyTpI~~~-----aD~ 185 (363)
T PF04864_consen 125 G-DASNFK---NSDNPSPYIELVTSPNNPDGQ-LRE---------AVLNGSSGKVIHDLAYYWPHYTPITAP-----ADH 185 (363)
T ss_dssp E-ECCCGT---T-S-CCGEEEEEESS-TTT----------------SSTTTEEEEEEE-TT-STTTS---S------B--
T ss_pred c-cHHhhc---cCCCCCCeEEEEeCCCCCccc-ccc---------hhcCCCCcceeeeeeeecccccccCCC-----CCC
Confidence 0 111111 11 134555677777665543 322 2345556678999999511 1111111 122
Q ss_pred c--hhhhhhhcc-CCcccccccc-cHHHHHHhcCCCCcccccCCCCCHHHHHHHHHHHHHHhc--------CChHHHHHH
Q 015230 245 D--LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--------PGTYEYLNK 312 (411)
Q Consensus 245 d--~~~~sK~~~-~G~~~g~~~~-~~~~~~~~~~~~~~~~~~t~~~~~~~~a~~~~~l~~~~~--------~~~~~~~~~ 312 (411)
| +.|+||.-| +|.|+||... .+++.+.+. .....+|.+.+-=++.-++..|+.+.+ +++.+.-++
T Consensus 186 DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~---~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~ 262 (363)
T PF04864_consen 186 DIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT---KYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYS 262 (363)
T ss_dssp SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH---HHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHH
T ss_pred ceEEEEEecccCccccccceeeecCHHHHHHHH---HHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHH
Confidence 4 459999998 8999999966 455666665 344556777777777777777765433 146666666
Q ss_pred HHHHHHHHHHHHHHhcCCc--------------eEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEe
Q 015230 313 ITGELTQGIIDAGKKAGHA--------------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 378 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v 378 (411)
..+.-+++|++....-... ....+...+.|+.+..... ..+...|++.||+.
T Consensus 263 ~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------------~DC~~~l~~~~I~t 328 (363)
T PF04864_consen 263 TMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------------EDCYAVLREAKIIT 328 (363)
T ss_dssp HHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------------SSHHHHHHCTTEEE
T ss_pred HHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCccc--------------ccHHHHHHhCCccc
Confidence 6666666666664322111 1123346789999964321 34677888889999
Q ss_pred ccCC-----CcceeeecCCCHHHHHHHHHHHHH
Q 015230 379 APSQ-----FEAGFTSLAHSSDDIQHTITAAEK 406 (411)
Q Consensus 379 ~~~~-----~~~~~~~~~~t~~~i~~~i~~l~~ 406 (411)
+.|. ...+|+++..++++.+.++++|..
T Consensus 329 r~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 329 RSGVLFGADSRYVRLSMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp EEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHC
T ss_pred CCCCccCCCCCeEEEeccCCHHHHHHHHHHHHh
Confidence 8873 335899999999999999999975
No 384
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.54 E-value=4e-06 Score=72.74 Aligned_cols=279 Identities=16% Similarity=0.123 Sum_probs=147.9
Q ss_pred EEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcC-CCCcccCCCCCCCCCCCCCCceeecCCCCHHHHH
Q 015230 96 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 174 (411)
+.+-||+.|+..+-........+..|.+..|.+.. ........| ..+...++-+... ..+ |++.+-
T Consensus 103 vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~n-H~~if~~aGf~tv~~Y~yWd~~~---------k~~---d~e~~L 169 (410)
T KOG1412|consen 103 VQSLSGTGALRIAADFLATFYNKNTVYVSNPTWEN-HHAIFEKAGFTTVATYPYWDAEN---------KCV---DLEGFL 169 (410)
T ss_pred eeeccccchhhhhHHHHHHhcccceeEecCCchhH-HHHHHHHcCCceeeeeeeecCCC---------cee---cHHHHH
Confidence 45668998988877644444455566666666653 333333333 2222211111110 011 778777
Q ss_pred HHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC----cccccc---CCCcchh
Q 015230 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG----GAQEYF---GVTPDLT 247 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~----~~~~~~---~~~~d~~ 247 (411)
..++..|+.-..++.-.-+|++| +.|+.|++.+|+++-++.+...+.|-+|-||..|.+ ++..++ |. +-++
T Consensus 170 sdl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~-e~fv 247 (410)
T KOG1412|consen 170 SDLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF-ELFV 247 (410)
T ss_pred HHHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC-eEEE
Confidence 77776655444444444455555 678899999999999999999999999998833321 122211 11 1122
Q ss_pred --hhhhhcc-CCcccccc---cccHHHHHHhcCCCCcccccCC-CCCHHHHHHHHHHHH------HHhc--CChHHHHHH
Q 015230 248 --TLGKIIG-GGLPVGAY---GGRRDIMEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLK------RLKE--PGTYEYLNK 312 (411)
Q Consensus 248 --~~sK~~~-~G~~~g~~---~~~~~~~~~~~~~~~~~~~~t~-~~~~~~~a~~~~~l~------~~~~--~~~~~~~~~ 312 (411)
||+|-|+ =|-|+|-+ +-++..+..+........-+++ +++...+......|+ .+.. ..+..++++
T Consensus 248 ~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~ 327 (410)
T KOG1412|consen 248 CQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKK 327 (410)
T ss_pred EhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 7999887 36688865 3345555544422111122233 223333333333332 1111 344456666
Q ss_pred HHHHHHHHHHHHHHhcCCce-EEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcceeeecC
Q 015230 313 ITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA 391 (411)
Q Consensus 313 ~~~~~~~~l~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~ 391 (411)
++..+++.|.++.. .+-+- .+...|+|-.--+. -..+-....++.|++.+.+ .+.++ .
T Consensus 328 MR~aLrd~L~aL~T-PGtWDHI~~QiGMFSyTGLt-----------------p~qV~~li~~h~vyLl~~G--RInis-G 386 (410)
T KOG1412|consen 328 MRTALRDHLVALKT-PGTWDHITQQIGMFSYTGLT-----------------PAQVDHLIENHKVYLLSDG--RINIS-G 386 (410)
T ss_pred HHHHHHHHHHhcCC-CCcHHHHHhhccceeecCCC-----------------HHHHHHHHHhceEEEecCC--cEeee-c
Confidence 66666666666632 12111 23444554222121 1344455556688888766 33332 3
Q ss_pred CCHHHHHHHHHHHHHHHHh
Q 015230 392 HSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 392 ~t~~~i~~~i~~l~~~~~~ 410 (411)
.+..+++....++.++.+.
T Consensus 387 LN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 387 LNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred cccccHHHHHHHHHHHHHh
Confidence 3445566666666665543
No 385
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.49 E-value=4.3e-05 Score=68.01 Aligned_cols=328 Identities=16% Similarity=0.133 Sum_probs=164.2
Q ss_pred EEeccCCccccccCCCcHHHHHHHHHHHHcCC-------CCCCCC----HHHHHHHHHHHhhCC-CCC---EEEEeCChH
Q 015230 38 YIDYVGSWGPAIIGHADDQVLAALGETMKKGT-------SFGAPC----LLENVLAEMVISAVP-SIE---MVRFVNSGT 102 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~~~~~v~~a~~~~l~~~~-------~~~~~~----~~~~~l~~~l~~~~~-~~~---~v~~~~~g~ 102 (411)
-++++.. - ++.+..+.+|+-..|.+-- .|.+-. +.+....++-.+.++ +++ .=+..-||+
T Consensus 42 gieLIaS---E--NFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGS 116 (477)
T KOG2467|consen 42 GIELIAS---E--NFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGS 116 (477)
T ss_pred ceeEeec---c--cchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCC
Confidence 3555554 2 2457778888888888821 121222 222333344445664 322 123444799
Q ss_pred HHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCC
Q 015230 103 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182 (411)
Q Consensus 103 ~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 182 (411)
.|+.++... .+.+++.++..+-+.-|+..-.....++.+-- ..-.+...|.......-.+ |.|.||+.....
T Consensus 117 PANfavYta--ll~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa-~SiyFeSmPYkv~~~TG~I---DYD~Le~~A~~f-- 188 (477)
T KOG2467|consen 117 PANFAVYTA--LLKPHERIMGLDLPSGGHLSHGYQTPTKKISA-TSIYFESMPYKVDPSTGYI---DYDKLEKTATLF-- 188 (477)
T ss_pred chhhHHHhh--hcCCCCeeeeccCCCCCccccccccCCceeee-eeeecccCceeeCCCCCce---ehHHHHHHHHhc--
Confidence 999887764 34567788887766554432211111111000 0011111111100011111 788888776654
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-ccc-ccc-cCccccccCCCcchh--hhhhhccCCc
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLA-YGGAQEYFGVTPDLT--TLGKIIGGGL 257 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~-~g~-~~g-~~~~~~~~~~~~d~~--~~sK~~~~G~ 257 (411)
.++++|+-. + .+.-.-+ ..+++++|.+.|++|++|=+| +|+ ..| ....+++. |++ |.-|++-| -
T Consensus 189 rPk~iiaG~--S---aY~R~~D-YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~----DiVTTTTHKsLRG-P 257 (477)
T KOG2467|consen 189 RPKLIIAGT--S---AYSRLID-YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYC----DIVTTTTHKSLRG-P 257 (477)
T ss_pred CCcEEEecc--c---cchhhcc-HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccccc----ceeeccccccccC-C
Confidence 566666622 1 1111112 789999999999999999999 476 444 23334433 454 56688874 1
Q ss_pred ccccccccHHH---------------HHHhcC-CCCcccccCCCCCHHHHHHHHHHHHHHhc---CChHHHHHHHHHHHH
Q 015230 258 PVGAYGGRRDI---------------MEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELT 318 (411)
Q Consensus 258 ~~g~~~~~~~~---------------~~~~~~-~~~~~~~~t~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~~ 318 (411)
|.|.+..++.+ -+.++. .-+..++++.+-...++|++ |+.... ++...++.++.+.+.
T Consensus 258 Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvA---LkQa~tpefk~Yq~qV~~Nakala 334 (477)
T KOG2467|consen 258 RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVA---LKQAMTPEFKEYQKQVLKNAKALA 334 (477)
T ss_pred cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHH---HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 34444333311 111211 11233333433333344443 333333 566677888889998
Q ss_pred HHHHHHHHhcCCceEEee-ecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEec----cC-----CCcceee
Q 015230 319 QGIIDAGKKAGHAICGGY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PS-----QFEAGFT 388 (411)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~----~~-----~~~~~~~ 388 (411)
+.|.+.. ...-..| ...++.+++....+ ++...+++++.+ +|.+. |+ ....+|+
T Consensus 335 ~~l~~~G----y~lvtgGTDnHlvLvDLr~~G~---------dGarvE~vle~~---~I~~NKNtvpGD~Sal~PgGiRi 398 (477)
T KOG2467|consen 335 SALISRG----YKLVTGGTDNHLVLVDLRPKGV---------DGARVEKVLELC---HIALNKNTVPGDKSALSPGGIRI 398 (477)
T ss_pred HHHHHcC----ceEecCCccceEEEEeccccCC---------chHHHHHHHHHh---hhhhcCCcCCCCccccCCCceec
Confidence 8888773 2222222 24477777754321 233333343333 33221 11 1223676
Q ss_pred --e----cCCCHHHHHHHHHHHHHHH
Q 015230 389 --S----LAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 389 --~----~~~t~~~i~~~i~~l~~~~ 408 (411)
| -...++|.++..+-|.+++
T Consensus 399 GtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 399 GTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred cchhhcccCccHHHHHHHHHHHHHHH
Confidence 3 2335677777777776654
No 386
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.39 E-value=1.2e-05 Score=75.02 Aligned_cols=273 Identities=15% Similarity=0.187 Sum_probs=125.8
Q ss_pred HHHHHHHHHhhCCCCCE--EEEeCChHHHHHHHHHHHHhccCC-cEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCC
Q 015230 78 ENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRLARAFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 154 (411)
Q Consensus 78 ~~~l~~~l~~~~~~~~~--v~~~~~g~~a~~~al~~~~~~~~~-~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 154 (411)
.-++...++++. +.|. ...-.+++.+-++++.+.+...++ +++++ +.+-|..+.......-..
T Consensus 112 lfe~Qs~i~eLT-GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv-~~~~hP~~~~v~~t~a~~------------ 177 (429)
T PF02347_consen 112 LFEYQSMICELT-GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLV-PESLHPQTRAVLRTYAAP------------ 177 (429)
T ss_dssp HHHHHHHHHHHH-TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEE-ETTS-CHHHHHHHHHCCH------------
T ss_pred HHHHHHHHHHhh-CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEE-cCCcChhhHHHHHHhhhh------------
Confidence 446666677776 4443 356667777777666544443333 35555 455554444433222110
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc----ccc-
Q 015230 155 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM----TGF- 229 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~----~g~- 229 (411)
.+.+++.++.++-.... .+++++|+++.++ .-|.+.+ +++|.++++++|.++|+ .+- .++
T Consensus 178 ---~g~~iv~~~~~~~~~~d------~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~ 242 (429)
T PF02347_consen 178 ---LGIEIVEVPLDEDGTTD------DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GADPNALGGLK 242 (429)
T ss_dssp ---CCEEEEEE-BBTTCSB-------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC-
T ss_pred ---CCeEEEEecccccCCcc------ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcC
Confidence 01123333322100000 3578888886544 3577777 99999999999999987 433 122
Q ss_pred ccccCccccccCCCcchh-----hhhhhccCCcc-cccccccHHHHHHhcC----------CCCc---------------
Q 015230 230 RLAYGGAQEYFGVTPDLT-----TLGKIIGGGLP-VGAYGGRRDIMEMVAP----------AGPM--------------- 278 (411)
Q Consensus 230 ~~g~~~~~~~~~~~~d~~-----~~sK~~~~G~~-~g~~~~~~~~~~~~~~----------~~~~--------------- 278 (411)
++|.+ |. ||+ +|+=.+++|-| .|++.++++++..+.. ....
T Consensus 243 ~Pge~------GA--DI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrRe 314 (429)
T PF02347_consen 243 SPGEY------GA--DIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRRE 314 (429)
T ss_dssp -GGGG------T---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGC
T ss_pred Chhhc------Cc--cEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccccccc
Confidence 33322 32 443 34444443445 7888888877665531 1100
Q ss_pred ccccCCCCCHHHHH-HHHHHHHHHhc---CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcc
Q 015230 279 YQAGTLSGNPLAMT-AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 354 (411)
Q Consensus 279 ~~~~t~~~~~~~~a-~~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 354 (411)
...+..+.++.-++ ++...+..+.. +++-++...+..++.++|++. ...++. +.-++-.+....
T Consensus 315 KAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~----~~~f~e~v~~~~------- 382 (429)
T PF02347_consen 315 KATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFD----NPFFFEFVVVFS------- 382 (429)
T ss_dssp CSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSS----SSSBSSEEEEES-------
T ss_pred chhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccC----CCCceeeeeecC-------
Confidence 01122233333333 23333333333 566678888899999998875 222221 112221221111
Q ss_pred hhcccchHHHHHHHHHHHHcCeEeccCCCcceee--ecCCCHHHHHHHHHHH
Q 015230 355 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAA 404 (411)
Q Consensus 355 ~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~~~i~~~i~~l 404 (411)
.. ....++.+.....|+.........+-+ .=..|+++||+++++|
T Consensus 383 ----~~-~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 383 ----KD-KEVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ----S--HHHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ----Cc-HHHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 11 233446666666676655444443333 4566889999999875
No 387
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.34 E-value=8.6e-05 Score=68.21 Aligned_cols=301 Identities=13% Similarity=0.111 Sum_probs=155.9
Q ss_pred CHHHHHHHHHHHhhCC-----------CCCEEEEeCChHHHHHHHHHHHHhc-----cCC-----------cEEEEEeCC
Q 015230 75 CLLENVLAEMVISAVP-----------SIEMVRFVNSGTEACMGVLRLARAF-----TGR-----------ERIIKFEGC 127 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~~-----------~~~~v~~~~~g~~a~~~al~~~~~~-----~~~-----------~~vi~~~~~ 127 (411)
++++.-..+||.+..+ ...-|++ .+++|++..++..+|.- ..+ +-|.....-
T Consensus 112 TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDq 190 (511)
T KOG0628|consen 112 TELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQ 190 (511)
T ss_pred HHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCc
Confidence 7888888899998662 1223333 46889999998776532 111 235556666
Q ss_pred cCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCC--CcEEEEEEcccCCCCCccCCCHHH
Q 015230 128 YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK--GEIAAIILEPVVGNSGFIAPKPDF 205 (411)
Q Consensus 128 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~--~~~~~vi~~~~~~~~G~~~~~~~~ 205 (411)
.|....-+...++-..+.++.....+. +.+.|.+++++.. +-+- |++-.+.+++|.-..+.
T Consensus 191 ahssveka~~i~~VklR~l~td~n~~m--------------r~~~L~~AIe~D~arGlIP-f~v~at~GTT~~ca~D~-- 253 (511)
T KOG0628|consen 191 AHSSVEKACLIAGVKLRALPTDENFGM--------------RGDTLRKAIEEDIARGLIP-FFVCATLGTTSSCAFDE-- 253 (511)
T ss_pred ccchHHHhHhhcceeEEEeecccCcCC--------------CHHHHHHHHHHHHhCCCcc-EEEEEeecCcccccccc--
Confidence 777777766666665555444332232 6788999988631 2233 33334455555555544
Q ss_pred HHHHHHHHHHhCCEEEEecccccc-ccccCccccccCCC-cchh--hhhhhcc-----------CCccccc-ccccHHHH
Q 015230 206 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT-PDLT--TLGKIIG-----------GGLPVGA-YGGRRDIM 269 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~~~~~~~~-~d~~--~~sK~~~-----------~G~~~g~-~~~~~~~~ 269 (411)
+.+|..+|+++|++|.+|.+|+|- ..-+.+-.-.-|+. .|-. ..+|++- .|.++.- ..+++-.+
T Consensus 254 l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL 333 (511)
T KOG0628|consen 254 LEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYL 333 (511)
T ss_pred HHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhh
Confidence 999999999999999999999854 11111100011221 1211 2355442 2222221 12222222
Q ss_pred HHhcCCCCcccccCCCCCHHHHHHHHHH------HHHHhcCChHHHHHHHHHHHHHHHHHHHHhcCCc-eEEeeecceEE
Q 015230 270 EMVAPAGPMYQAGTLSGNPLAMTAGIHT------LKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFG 342 (411)
Q Consensus 270 ~~~~~~~~~~~~~t~~~~~~~~a~~~~~------l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~g~~~~ 342 (411)
+.-.... ...+.-=++...--..+ ++.+.-+++++++++..+. .+.+.++..+-+.. ......=.++.
T Consensus 334 ~h~~~~~----~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~L-a~~fe~lv~~d~~FE~~~~~~lgLvc 408 (511)
T KOG0628|consen 334 KHAYQGS----APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRL-AKEFETLVRADPRFEIVNKRILGLVC 408 (511)
T ss_pred cchhhcc----CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHhhcCCcceeecccccceeE
Confidence 1111000 00111111111112222 2333336666666665544 45556654333321 11122222445
Q ss_pred EEEecCCCCCcchhcccchHHHHHHHHHHHHc-CeEeccCCCcc---eee---ecCCCHHHHHHHHHHHHHHHHh
Q 015230 343 FFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQFEA---GFT---SLAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gi~v~~~~~~~---~~~---~~~~t~~~i~~~i~~l~~~~~~ 410 (411)
|.+.+. ....+++.+.+.+. .|.+.|..... +|+ ..-++++++++.-+.|.+..+.
T Consensus 409 FRlk~~------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 409 FRLKGD------------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EeecCC------------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 555432 23336677766655 77777764222 333 3556889999999988877654
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.23 E-value=3.9e-05 Score=67.76 Aligned_cols=151 Identities=21% Similarity=0.203 Sum_probs=86.9
Q ss_pred EEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCC--cccCCCCCCCCCCCCCCceeecCCCCHHHH
Q 015230 96 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV--ATLGLPDSPGVPKGATYETLTAPFNDVSAL 173 (411)
Q Consensus 96 ~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 173 (411)
+.|-|||.|+..+-.....+-+...|.+.+|++-- ....-...|..+ ++.+.+...++ |.+.+
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgN-h~~if~~ag~~~~~yrYyd~~t~gl--------------d~~g~ 188 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGN-HKNIFKDAGLPVKFYRYYDPKTRGL--------------DFKGM 188 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccc-cCccccccCcceeeeeecccccccc--------------chHHH
Confidence 44557888887766555456666677777776643 222222222211 11122222232 55655
Q ss_pred HHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccC----cccccc---CCCcch
Q 015230 174 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG----GAQEYF---GVTPDL 246 (411)
Q Consensus 174 ~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~----~~~~~~---~~~~d~ 246 (411)
-+-+.+.++.-.+++--.-++++| +.|+.|.+++|.++-++.+.+-++|-+|-||..|.. .+..++ |...-+
T Consensus 189 ledl~~~p~gs~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~l 267 (427)
T KOG1411|consen 189 LEDLGEAPEGSIILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILL 267 (427)
T ss_pred HHHHhcCCCCcEEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEe
Confidence 555555544433333333444455 678899999999999999999999999998833321 111111 222111
Q ss_pred h-hhhhhcc-CCcccccc
Q 015230 247 T-TLGKIIG-GGLPVGAY 262 (411)
Q Consensus 247 ~-~~sK~~~-~G~~~g~~ 262 (411)
. |+.|-+| =|=|+|.+
T Consensus 268 aQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 268 AQSYAKNMGLYGERVGAL 285 (427)
T ss_pred ehhhhhhcchhhhcccee
Confidence 1 7889887 36688876
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.96 E-value=0.0064 Score=53.14 Aligned_cols=266 Identities=16% Similarity=0.148 Sum_probs=137.6
Q ss_pred CCCCCCHHHHHHHHHHHhhCCC---CCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCccc
Q 015230 70 SFGAPCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATL 146 (411)
Q Consensus 70 ~~~~~~~~~~~l~~~l~~~~~~---~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~ 146 (411)
+|+|-+--++.|.+-+++.++. .-+.-|. ||+.|+..||.. .+.+++..+...++=+-......-+.|.+.-.
T Consensus 59 GYGydD~GRdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg--~LRpgDell~i~G~PYDTLeevIG~rg~~~gS- 134 (416)
T COG4100 59 GYGYDDLGRDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFG--ILRPGDELLYITGSPYDTLEEVIGLRGEGQGS- 134 (416)
T ss_pred CCCccccchhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHh--ccCCCCeEEEecCCcchhHHHHhccCCCCccc-
Confidence 3455555577888888888862 2233344 699999998864 34466666666554333333333333321111
Q ss_pred CCCCCCCCCCCCCCceeecCCC-----CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCH--HHHHHHHHHHHHh--C
Q 015230 147 GLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP--DFLNAIRRITKEN--G 217 (411)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~--~~l~~i~~l~~~~--~ 217 (411)
...++.....++.. |.+.++..++ +++++|.+.-.- |=.+.|+- +.++++.++.++- +
T Consensus 135 --------L~dfgi~Y~~v~Lt~~gkiD~~~v~~~i~---~~tkli~IQRS~--GY~~RpS~~I~eI~~~i~~vk~inpn 201 (416)
T COG4100 135 --------LKDFGIKYKAVPLTADGKIDIQAVKTAIS---DRTKLIGIQRSK--GYAWRPSLSIAEIEEMITFVKEINPN 201 (416)
T ss_pred --------HHHhCcceeecccccCCcccHHHHHHhcC---ccceEEEEEecc--CcCCCCcccHHHHHHHHHHHHhcCCC
Confidence 00001011111111 7888888887 568888775422 22233322 2255666666664 6
Q ss_pred CEEEEecccccc-ccccCccccccCCCcchh--hhhhhccCCcc--cccccccHHHHHHhcC--CCCcccccCCCCCHHH
Q 015230 218 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLP--VGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLA 290 (411)
Q Consensus 218 ~~li~De~~~g~-~~g~~~~~~~~~~~~d~~--~~sK~~~~G~~--~g~~~~~~~~~~~~~~--~~~~~~~~t~~~~~~~ 290 (411)
+++++|.+|..| ..-.+ ..+..|++ |+=|--+||+- -||++++++++++-.- ..+. .+ .-++. .
T Consensus 202 ~ivFVDNCYGEFvE~~EP-----t~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPG-IG-~e~Ga--t 272 (416)
T COG4100 202 VIVFVDNCYGEFVEEKEP-----THVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPG-IG-REGGA--T 272 (416)
T ss_pred EEEEEeccchhhhhccCc-----cccchhhhccceeeCCCCceeeccceeechHHHHHhhceeeecCC-cc-ccccc--c
Confidence 899999999877 22211 22345654 77788888853 5678999999876531 1111 00 11111 1
Q ss_pred HHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHH
Q 015230 291 MTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 369 (411)
Q Consensus 291 ~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (411)
....+....-+.- +.+..+..+-.......|+++.....-..+.+..-++-.+.+ ++.+.+..+++
T Consensus 273 ~~~l~~myqGlFlAPhvv~qa~Kga~fta~~le~lg~~~~P~~~~kRtDlIQavkf-------------~~~eKmIaFcq 339 (416)
T COG4100 273 LYSLREMYQGLFLAPHVVSQAVKGAHFTARFLEKLGFPVNPKYDAKRTDLIQAVKF-------------GSKEKMIAFCQ 339 (416)
T ss_pred HHHHHHHHhhhccchHHHHHHhhhhHHHHHHHHHcCCCCCCcccccccchhhheec-------------CCHHHHHHHHH
Confidence 1111222221111 566666666666666666666321111111222233444444 45566677777
Q ss_pred HHHHc
Q 015230 370 GMLEE 374 (411)
Q Consensus 370 ~l~~~ 374 (411)
.+...
T Consensus 340 aiQ~a 344 (416)
T COG4100 340 AIQAA 344 (416)
T ss_pred HHhhc
Confidence 76644
No 390
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.93 E-value=0.0028 Score=57.06 Aligned_cols=312 Identities=14% Similarity=0.035 Sum_probs=159.4
Q ss_pred CcHHHHHHHHHHHHcCCCCCCC-----------CHHHHHHHHHHHhhCC--CCCEEEEeCChHHHHHHHHHHHHhccCCc
Q 015230 53 ADDQVLAALGETMKKGTSFGAP-----------CLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRE 119 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~-----------~~~~~~l~~~l~~~~~--~~~~v~~~~~g~~a~~~al~~~~~~~~~~ 119 (411)
.+|++++.+.+.+.+..+.+.+ .+...+..+.+.++++ .--+|+|..||..+-..++.+-+.-.++.
T Consensus 16 lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~ 95 (365)
T COG1932 16 LPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGT 95 (365)
T ss_pred CCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCc
Confidence 6788888888887774332211 3344556666667775 45588888876666555554321211211
Q ss_pred EEEEEeCCcCCCchhhh-hhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCc
Q 015230 120 RIIKFEGCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 198 (411)
Q Consensus 120 ~vi~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~ 198 (411)
+ .+..+.+. ...... ...+......... . ...+.-.+| +++..+ +. ++.+-|++.++....|+
T Consensus 96 ~-yv~~g~Ws-~~a~~eA~~~~~~~~~~~~~---~----~~~~~~~iP--~~~~~~--~~---~~~ayv~~~~NeTi~Gv 159 (365)
T COG1932 96 D-YVDTGAWS-EFAIKEAKKVGKQPKLIDAR---I----EEAGYGSIP--DLSKWD--FS---DNDAYVHFCWNETISGV 159 (365)
T ss_pred e-eEeeeehh-HhHHHHHHHhcccccccccc---e----eccCccCCC--Chhhcc--cC---CCccEEEEecCCcccce
Confidence 1 22222222 111111 1112211110000 0 000011111 333322 21 23444667676666776
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh--hhhhhccC-CcccccccccHHHHHHhcCC
Q 015230 199 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRRDIMEMVAPA 275 (411)
Q Consensus 199 ~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~--~~sK~~~~-G~~~g~~~~~~~~~~~~~~~ 275 (411)
-.++.. .+... .++|+|-.-.=+ +.. .+.. .-|++ +..|-+|+ | ++.++.+++++++....
T Consensus 160 ~v~~~p------~~~~~--~~~v~D~SS~il--sr~--iDvs--k~dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~ 223 (365)
T COG1932 160 EVPELP------DIGSD--GLLVADASSAIL--SRP--IDVS--KYDVIYAGAQKNLGPAG--LTVVIVRPDLLERAESY 223 (365)
T ss_pred EccCCC------CCCCC--ceEEEecccHHh--cCC--CChh--HcceEEEehhhccCccc--eEEEEEcHHHHhccccc
Confidence 655321 11111 788898655311 011 1111 12333 56799984 6 77778999999888642
Q ss_pred -CC--------cccccCCCCCH-HHHHHHHHHHHHHhc----CChHHHHHHHHHHHHHHHHHHHHhcCCceEEeeecc-e
Q 015230 276 -GP--------MYQAGTLSGNP-LAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG-M 340 (411)
Q Consensus 276 -~~--------~~~~~t~~~~~-~~~a~~~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~-~ 340 (411)
-+ ...+++++.+| ++.......++.+.. +.+.++.+++.+.+.+.+.+- ..+........+.. -
T Consensus 224 ~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mn 302 (365)
T COG1932 224 TLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMN 302 (365)
T ss_pred CCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-Cccccccchhhcccee
Confidence 11 12234554444 444444555665555 566677777777777777665 11111111122222 3
Q ss_pred EEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCC--cceeee--cCCCHHHHHHHHHHHHHHHHh
Q 015230 341 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFTS--LAHSSDDIQHTITAAEKVLRQ 410 (411)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~--~~~~~~--~~~t~~~i~~~i~~l~~~~~~ 410 (411)
+.|.+. +.+..+.+.+.+.++|+....+.. ..+|.+ -++..++++.+++-++.+.++
T Consensus 303 V~f~~~-------------~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 303 VTFTLV-------------DAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred EEEEcC-------------cHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 444442 233446788888888888766631 125653 466889999999998877654
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.74 E-value=0.006 Score=62.67 Aligned_cols=307 Identities=13% Similarity=0.076 Sum_probs=154.3
Q ss_pred EEeccCCccccccCCCcHHHH-HHHHHHHH---cCCCCC-----CCCHHHHHHHHHHHhhCC-CCCEEEEeCChHHHHHH
Q 015230 38 YIDYVGSWGPAIIGHADDQVL-AALGETMK---KGTSFG-----APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 107 (411)
Q Consensus 38 ~~d~~~~~~~~~~g~~~~~v~-~a~~~~l~---~~~~~~-----~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~~a~~~ 107 (411)
+..|++. -+++|--|.++ +.+.+--. ..++|+ +.-+..-++...++++.+ +..+...-.+++.+-|+
T Consensus 80 ~~~fiG~---G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA 156 (954)
T PRK12566 80 WTSLIGM---GYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEA 156 (954)
T ss_pred ccccccc---cccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHH
Confidence 4455554 77887444443 65554311 122222 112333455566666664 33344555567776664
Q ss_pred HHHHHHhccC--CcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEE
Q 015230 108 VLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185 (411)
Q Consensus 108 al~~~~~~~~--~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~ 185 (411)
++. ++...+ +.++++.+..++ .+...+...-. ..++ +++ .+++++.+. ++++
T Consensus 157 ~~m-a~~~~~~k~~~~~v~~~~hP-~~~~v~~t~~~---------~~g~------~i~------~~~~~~~~~---~~~~ 210 (954)
T PRK12566 157 MAL-AKRVAKSKSNRFFVDEHCHP-QTLSVLRTRAE---------GFGF------ELV------VDAVDNLAA---HAVF 210 (954)
T ss_pred HHH-HHHHhhcCCCEEEECCCCCH-HHHHHHHHhhh---------cCCc------EEE------EcchhhcCC---CCEE
Confidence 443 333333 455555444443 32222211111 1111 111 133444333 3578
Q ss_pred EEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE--ecccccc--ccccCccccccCCCcchh-----hhhhhccCC
Q 015230 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGF--RLAYGGAQEYFGVTPDLT-----TLGKIIGGG 256 (411)
Q Consensus 186 ~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~--De~~~g~--~~g~~~~~~~~~~~~d~~-----~~sK~~~~G 256 (411)
++++...+ ..|.+.+ +++|.++++++|.++|+ |-.--++ .+|.+ | .||+ .|+=.++.|
T Consensus 211 ~v~vq~P~-~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge~------G--ADI~vG~~Q~fGvp~~~G 277 (954)
T PRK12566 211 GALLQYPD-THGEIRD----LRPLIDQLHGQQALACVAADLLSLLVLTPPGEL------G--ADVVLGSTQRFGVPMGYG 277 (954)
T ss_pred EEEEECCC-CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCCCChhhc------C--CcEEeeCCCcCCCCCCCC
Confidence 88775433 3577766 99999999999998662 2211122 23332 2 2443 244444423
Q ss_pred cc-cccccccHHHHHHhcC----------CCCc---------------ccccCCCCCHHHHHHHHHHHH-HHhc---CCh
Q 015230 257 LP-VGAYGGRRDIMEMVAP----------AGPM---------------YQAGTLSGNPLAMTAGIHTLK-RLKE---PGT 306 (411)
Q Consensus 257 ~~-~g~~~~~~~~~~~~~~----------~~~~---------------~~~~t~~~~~~~~a~~~~~l~-~~~~---~~~ 306 (411)
-| .|++.+++++...+.. .++. ...+..+.++.-+|...+..- .+.. +++
T Consensus 278 GP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~i 357 (954)
T PRK12566 278 GPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRI 357 (954)
T ss_pred CCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 35 7888888776655531 0000 011111223333333222222 2222 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceEEeeecceEEEEEecCCCCCcchhcccchHHHHHHHHHHHHcCeEeccCCCcce
Q 015230 307 YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 386 (411)
Q Consensus 307 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~~ 386 (411)
-+++.++..++.+.|++. ++.. ....+|--|.+.- . ..+.++.+...++|+-++......+
T Consensus 358 a~~~~~~a~~l~~~l~~~----g~~~--~~~~fF~~~~v~~-----------~--~~~~~~~~~a~~~~~n~r~~~~~~~ 418 (954)
T PRK12566 358 AQRVHRLTAILAAGLEAK----GIKR--LNRHFFDTLTLEV-----------G--GAQAAIIESAEAARINLRILGRGRL 418 (954)
T ss_pred HHHHHHHHHHHHHHHHhc----CCcc--ccCCccceEEEEc-----------c--CCHHHHHHHHHHCCCeeEEeCCCeE
Confidence 455777777888888774 2111 1112333333321 0 0246788888889998887766666
Q ss_pred eee--cCCCHHHHHHHHHHHH
Q 015230 387 FTS--LAHSSDDIQHTITAAE 405 (411)
Q Consensus 387 ~~~--~~~t~~~i~~~i~~l~ 405 (411)
.++ -.+|.+|++.+++.+.
T Consensus 419 ~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 419 GVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred EEEeCCCCCHHHHHHHHHHhc
Confidence 664 5678999999999884
No 392
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.31 E-value=0.017 Score=49.52 Aligned_cols=108 Identities=20% Similarity=0.212 Sum_probs=61.7
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccc---cCccccccCCCc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA---YGGAQEYFGVTP 244 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g---~~~~~~~~~~~~ 244 (411)
|++.+++.+++..++..+. +.+..+.-.-..| +-+++|..+|..|+++-|+..+| |+ ... ..-+....|. .
T Consensus 142 dleav~~~iee~g~dcilc-i~sttscfapr~p--d~leaiaaica~~diphivnnay-glqsee~i~~iaa~~~~gr-i 216 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILC-IHSTTSCFAPRSP--DNLEAIAAICAAHDIPHIVNNAY-GLQSEECIHKIAAAAECGR-I 216 (432)
T ss_pred hHHHHHHHHHHhCCceEEE-EeecccccCCCCC--chHHHHHHHHHccCchhhhcccc-ccchHHHHHHHHHHhhhcc-H
Confidence 7889999998765553332 2222222222233 34999999999999999999999 34 111 1111111222 2
Q ss_pred c--hhhhhhhccCCcccccc---cccHHHHHHhcCCCCcccccC
Q 015230 245 D--LTTLGKIIGGGLPVGAY---GGRRDIMEMVAPAGPMYQAGT 283 (411)
Q Consensus 245 d--~~~~sK~~~~G~~~g~~---~~~~~~~~~~~~~~~~~~~~t 283 (411)
| +-++-|-|-- |+|.. ..+...++.+.+..+...+..
T Consensus 217 da~vqsldknf~v--pvggaiia~fk~n~iq~iak~ypgrasa~ 258 (432)
T KOG3843|consen 217 DAFVQSLDKNFMV--PVGGAIIAAFKDNFIQEIAKMYPGRASAS 258 (432)
T ss_pred HHHHHHhhhccee--ecchhHhhHhHHHHHHHHHHhCCCccccC
Confidence 3 2378887763 45433 236667777776555544433
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.20 E-value=0.0026 Score=51.22 Aligned_cols=72 Identities=8% Similarity=0.090 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHhhCC-----CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCC
Q 015230 56 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130 (411)
Q Consensus 56 ~v~~a~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~-----~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~ 130 (411)
.+++++.+ +.....+.+..++++++++++.+.++ .+++|++|+|+++|++.+++. ...+++.|++.++.|++
T Consensus 77 ~i~~~~~~-~a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~--l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 77 GTIDSFKD-IALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFC--IADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHH-HhcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHH--HcCCCCEEEEeCCCCCC
Confidence 33444544 22233455678999999999998754 478999999999999998874 23467889999988874
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=88.55 E-value=28 Score=34.75 Aligned_cols=42 Identities=5% Similarity=-0.087 Sum_probs=31.1
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeee--cCCCHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAE 405 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~--~~~t~~~i~~~i~~l~ 405 (411)
++++.+...++.|-++-.....+.++ -..+++|+|.++..+.
T Consensus 435 ~~~~l~rA~~~~iNlr~~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 435 AEEVLDRAAKRQINLRLVEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred HHHHHHHHHhhcCceEEeecCceEEeecccccHHHHHHHHHHHc
Confidence 46777777777777776666666665 4668899999998875
No 395
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=85.57 E-value=26 Score=31.31 Aligned_cols=117 Identities=21% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCC--cCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCC
Q 015230 91 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168 (411)
Q Consensus 91 ~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (411)
...+|++|.|.+..++..|+.|....+.-.||+-++. +-|+ ..+..+.-. +.+...++
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH-~~Ak~la~~-----------------giettVI~-- 220 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGH-ELAKPLAQA-----------------GIETTVIP-- 220 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccch-HhhHHHHHc-----------------CCeeEEec--
Confidence 5678999999999999999877554444556664432 2221 111111111 11122222
Q ss_pred CHHHHHHHHHcCCCcEEEEE-EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc-ccccCcc
Q 015230 169 DVSALENLFENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi-~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~-~~g~~~~ 236 (411)
|.. +-..+.+ .-+.|+ .-.+..+||...+.- ...++..|++|-+++|+= +|+ +..+.+.
T Consensus 221 daa-VfA~Msr---VnKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~Vl---Ap~yKLsPlyp 281 (353)
T KOG1465|consen 221 DAA-VFAMMSR---VNKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIVL---APMYKLSPLYP 281 (353)
T ss_pred cHH-HHHHhhh---cceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEEe---cchhhcCCCCC
Confidence 433 3344442 223333 334677888777766 889999999999999864 344 4444443
No 396
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=70.02 E-value=15 Score=32.44 Aligned_cols=57 Identities=14% Similarity=0.213 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCc--cCCCHHHHHHHHHHHHHhCCEEE--Eeccc
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGF--IAPKPDFLNAIRRITKENGALLI--FDEVM 226 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~--~~~~~~~l~~i~~l~~~~~~~li--~De~~ 226 (411)
.+.|.+++..++...-.+|+||.+++|.. ..++.+|...|.++-+.-|+.+| ++-.|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vlGYV~T~Y 78 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVLGYVHTSY 78 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEEEEEEccc
Confidence 67788888888888889999998888743 44889999999999766676555 55444
No 397
>PLN02672 methionine S-methyltransferase
Probab=69.89 E-value=55 Score=35.46 Aligned_cols=150 Identities=17% Similarity=0.112 Sum_probs=79.8
Q ss_pred HHHHHHHHHcCCCC-----CCCCHHHHHHHHHHHhhCC---CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcC
Q 015230 58 LAALGETMKKGTSF-----GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129 (411)
Q Consensus 58 ~~a~~~~l~~~~~~-----~~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~ 129 (411)
...+.+.|+....+ .+...++..++..+..+++ .++.|++.++-..|++.++++ +..+-.++=-.-+-|
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 483 (1082)
T PLN02672 407 LAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRL---FSPRLAIVDEHLTRW 483 (1082)
T ss_pred HHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHh---hChHHHhhhhhhhcc
Confidence 44455555553322 1336677778887777775 689999999999999999984 322111100000111
Q ss_pred --CCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHH
Q 015230 130 --GHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 207 (411)
Q Consensus 130 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~ 207 (411)
-....++...+.+.. -.......+...|.. .+.+.+.+++. ++.+|+..--+.+-- +.+. ++
T Consensus 484 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~--~~ 547 (1082)
T PLN02672 484 LPKKWLTSLAIENATSD---------SKSDDVITVIEAPRQ-SDLVIELIKKL--KPQVVVTGMADFEMR--TSTA--FE 547 (1082)
T ss_pred CCHHHHhHhhhhccccc---------CccCCeEEEEeCCCc-chHHHHHHHhC--CCeEEEEeccchhhh--hHHH--HH
Confidence 011111111221000 001111233334433 34566777765 455555543333322 2222 99
Q ss_pred HHHHHHHHhCCEEEEeccc
Q 015230 208 AIRRITKENGALLIFDEVM 226 (411)
Q Consensus 208 ~i~~l~~~~~~~li~De~~ 226 (411)
.|.+.+++-|+.|+.|..-
T Consensus 548 ~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 548 HLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred HHHHHHHhhCcEEEEehhh
Confidence 9999999999999999864
No 398
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=68.06 E-value=42 Score=30.69 Aligned_cols=117 Identities=14% Similarity=0.131 Sum_probs=61.4
Q ss_pred HHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCC--cCCCchhhhhhcCCCCcccCCCCCCCCCC
Q 015230 79 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPFLVKAGSGVATLGLPDSPGVPK 156 (411)
Q Consensus 79 ~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (411)
+.+++.-.+... .+++++|.|-+..+...|+.+....++-.|++.+.. +.| ...+..+...
T Consensus 108 ~~I~~~a~~~i~-~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G-~~~a~~L~~~--------------- 170 (310)
T PRK08535 108 EKIGEIGAKRIR-DGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQG-HITAKELAEY--------------- 170 (310)
T ss_pred HHHHHHHHHHcC-CCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhH-HHHHHHHHHC---------------
Confidence 444444444443 345788888888888888765444445566654432 112 1111112111
Q ss_pred CCCCceeecCCCCHHHHHHHHHcCCCcEEEEE--EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 157 GATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 157 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi--~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+.++..++ | ..+-..+.+ +-.|+ .+.+..+||.+...= -..++-+|+.|++++++=
T Consensus 171 --GI~vtlI~--D-sav~~~m~~----vd~VivGAd~v~~nG~v~nkiG--T~~~A~~Ak~~~vPv~V~ 228 (310)
T PRK08535 171 --GIPVTLIV--D-SAVRYFMKD----VDKVVVGADAITANGAVINKIG--TSQIALAAHEARVPFMVA 228 (310)
T ss_pred --CCCEEEEe--h-hHHHHHHHh----CCEEEECccEEecCCCEEeHHh--HHHHHHHHHHhCCCEEEe
Confidence 11233332 2 333444542 22333 455667777665433 556778899999998864
No 399
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=64.92 E-value=1.1e+02 Score=27.90 Aligned_cols=122 Identities=13% Similarity=0.113 Sum_probs=62.6
Q ss_pred HHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCC--chhhhhhcCCCCcccCCCCCCCCCC
Q 015230 79 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH--ADPFLVKAGSGVATLGLPDSPGVPK 156 (411)
Q Consensus 79 ~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (411)
+.+++.-.+...+ ..+++|.|-+..+...|+.+....++-+|++.+. .+.. ...+..+... +
T Consensus 103 ~~I~~~a~~~i~~-g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~Es-rP~~~G~~~a~~L~~~-----------g--- 166 (301)
T TIGR00511 103 ERIGEIGAKRIRD-GDVVMTHCNSEAALSVIKTAFEQGKDIEVIATET-RPRKQGHITAKELRDY-----------G--- 166 (301)
T ss_pred HHHHHHHHHHcCC-CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecC-CCcchHHHHHHHHHHC-----------C---
Confidence 4444444444433 4577888777777777766544445566666543 2211 1111112211 1
Q ss_pred CCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe-ccc
Q 015230 157 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD-EVM 226 (411)
Q Consensus 157 ~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D-e~~ 226 (411)
.++..++ | ..+-..+.+. +..++=.+.+..+||.+...= -..++-+|+.|++++++= |.|
T Consensus 167 ---I~vtlI~--D-sa~~~~m~~v--d~VivGad~v~~nG~v~nkiG--T~~lA~~Ak~~~vPv~V~a~~~ 227 (301)
T TIGR00511 167 ---IPVTLIV--D-SAVRYFMKEV--DHVVVGADAITANGALINKIG--TSQLALAAREARVPFMVAAETY 227 (301)
T ss_pred ---CCEEEEe--h-hHHHHHHHhC--CEEEECccEEecCCCEEEHHh--HHHHHHHHHHhCCCEEEEcccc
Confidence 1222222 3 3344445421 122222455667777665433 556778899999998863 444
No 400
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=64.49 E-value=80 Score=28.29 Aligned_cols=117 Identities=16% Similarity=0.106 Sum_probs=56.0
Q ss_pred HHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeC--CcCCCchhhhhhcCCCCcccCCCCCCCCCCC
Q 015230 80 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGHADPFLVKAGSGVATLGLPDSPGVPKG 157 (411)
Q Consensus 80 ~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 157 (411)
++++.-.+...+ .++++|.+-+..+..+|+.+....++-+|++.+. .+.|... +..+... +
T Consensus 98 ~I~~~a~~~I~~-g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~~-----------G---- 160 (275)
T PRK08335 98 EIGNIGSELIDD-GDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEFL-----------G---- 160 (275)
T ss_pred HHHHHHHHHcCC-CCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHHC-----------C----
Confidence 333333444433 4467777766677777765544444556666542 2223222 2222211 1
Q ss_pred CCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 158 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 158 ~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
.++..+. | ..+-..+++. +..++=.+.+..+|+.+..-= --.++-+|+.|++++++
T Consensus 161 --I~vtlI~--D-sa~~~~m~~v--d~VivGAD~I~~nG~v~NKiG--T~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 161 --IEFEVIT--D-AQLGLFAKEA--TLALVGADNVTRDGYVVNKAG--TYLLALACHDNGVPFYV 216 (275)
T ss_pred --CCEEEEe--c-cHHHHHHHhC--CEEEECccEEecCCCEeehhh--HHHHHHHHHHcCCCEEE
Confidence 1222222 2 1222334421 122222445666666554322 34667788999999885
No 401
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=64.39 E-value=38 Score=26.58 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=37.0
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHH-HHHh-CCEEE-Eecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKEN-GALLI-FDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l-~~~~-~~~li-~De~~~ 227 (411)
+++.+.+.++++ ++..+++=-+.++.|...+.....++.++. ..++ +++++ +||-++
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 799999999975 555555544444556556555545555544 4455 98776 999997
No 402
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=61.48 E-value=77 Score=28.89 Aligned_cols=36 Identities=8% Similarity=0.047 Sum_probs=25.2
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe-ccc
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD-EVM 226 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D-e~~ 226 (411)
.+.+..+||.+..-= -..++-+|+.|++++++= |.|
T Consensus 205 Ad~v~~nG~v~nk~G--T~~lA~~Ak~~~vPv~V~a~s~ 241 (303)
T TIGR00524 205 ADRIARNGDVANKIG--TYQLAVLAKEFRIPFFVAAPLS 241 (303)
T ss_pred ccEEecCCCEeEhhh--HHHHHHHHHHhCCCEEEecccc
Confidence 455777777765433 556778899999998864 444
No 403
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=58.29 E-value=13 Score=32.41 Aligned_cols=48 Identities=19% Similarity=0.423 Sum_probs=35.1
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCC-CccCCCHHHHHHHHHHHHHhCCEEEEec
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNS-GFIAPKPDFLNAIRRITKENGALLIFDE 224 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~-G~~~~~~~~l~~i~~l~~~~~~~li~De 224 (411)
+.+.+++.+. +.-++++-|..+-. ... +.+++|.+++++.++++++|.
T Consensus 91 av~~i~k~L~----RlhavVIGPGLGRdp~~~----k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 91 AVDIIEKLLQ----RLHAVVIGPGLGRDPAIL----KEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hHhHHHHHHh----heeEEEECCCCCCCHHHH----HHHHHHHHHHhcCCCcEEEcC
Confidence 4566677676 67788888866442 222 238899999999999999994
No 404
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=57.67 E-value=14 Score=30.94 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=28.8
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
-.+++||||-.+. .|.... ..++.++|++||+++|
T Consensus 155 l~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~i 189 (203)
T COG0108 155 LKPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVI 189 (203)
T ss_pred CCCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEE
Confidence 4678999998887 455555 8899999999999888
No 405
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=56.99 E-value=27 Score=29.82 Aligned_cols=96 Identities=15% Similarity=0.203 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc-cccccccCccccccCCC-cchh
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVT-PDLT 247 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~-~g~~~g~~~~~~~~~~~-~d~~ 247 (411)
.+.++++++. .+.++-+=.-+...-.. .+..+++.++|++|++++|+++=. --...+..+. |.|.. ..+.
T Consensus 24 ~~~ve~al~~---Gv~~vQlR~K~~~~~~~---~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGV--HlGq~D~~~~ 95 (211)
T COG0352 24 LEWVEAALKG---GVTAVQLREKDLSDEEY---LALAEKLRALCQKYGVPLIINDRVDLALAVGADGV--HLGQDDMPLA 95 (211)
T ss_pred HHHHHHHHhC---CCeEEEEecCCCChHHH---HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEE--EcCCcccchH
Confidence 6888888873 34444433322221111 344789999999999998877633 1111111111 22322 2234
Q ss_pred hhhhhccCCcccccccccHHHHHHhc
Q 015230 248 TLGKIIGGGLPVGAYGGRRDIMEMVA 273 (411)
Q Consensus 248 ~~sK~~~~G~~~g~~~~~~~~~~~~~ 273 (411)
...|-++.++.+|+-+-+.+......
T Consensus 96 ~ar~~~~~~~iIG~S~h~~eea~~A~ 121 (211)
T COG0352 96 EARELLGPGLIIGLSTHDLEEALEAE 121 (211)
T ss_pred HHHHhcCCCCEEEeecCCHHHHHHHH
Confidence 55677777888998866655444433
No 406
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=56.13 E-value=26 Score=33.10 Aligned_cols=55 Identities=20% Similarity=0.295 Sum_probs=36.2
Q ss_pred CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCC--EEEEeccccccccccCccccccCC--Ccchhhhhh
Q 015230 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA--LLIFDEVMTGFRLAYGGAQEYFGV--TPDLTTLGK 251 (411)
Q Consensus 181 ~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~--~li~De~~~g~~~g~~~~~~~~~~--~~d~~~~sK 251 (411)
..+++++.+.|-.-.+. +++.+.+-..+++. ++++||+|+ ..+||+ .||...++-
T Consensus 111 kp~~K~LYITPE~AAt~-------~FQ~lLn~L~~r~~L~Y~vVDEAHC---------VSQWGHDFRPDYL~LG~ 169 (641)
T KOG0352|consen 111 KPTIKMLYITPEGAATD-------GFQKLLNGLANRDVLRYIVVDEAHC---------VSQWGHDFRPDYLTLGS 169 (641)
T ss_pred CCceeEEEEchhhhhhh-------hHHHHHHHHhhhceeeeEEechhhh---------HhhhccccCcchhhhhh
Confidence 35788999988653322 25556665555554 789999997 334554 599887764
No 407
>smart00642 Aamy Alpha-amylase domain.
Probab=55.59 E-value=37 Score=27.76 Aligned_cols=59 Identities=15% Similarity=0.251 Sum_probs=38.8
Q ss_pred CHHHHHHHHHcC-CCcEEEEEEcccCCCCC----cc-------------CCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN-KGEIAAIILEPVVGNSG----FI-------------APKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~-~~~~~~vi~~~~~~~~G----~~-------------~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
|++.+.+.+... .-.+.+|.+.|++.... .. .-+.+.++++.+-|+++|+-||.|=|..
T Consensus 17 ~~~gi~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 17 DLQGIIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 566655554321 12467888888764432 00 0123559999999999999999998775
No 408
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=54.72 E-value=14 Score=27.64 Aligned_cols=50 Identities=6% Similarity=0.102 Sum_probs=35.0
Q ss_pred chHHHHHHHHHHHHcCeEeccC----CCc---ceeeecCCCHHHHHHHHHHHHHHHH
Q 015230 360 ETTKFARFYRGMLEEGVYFAPS----QFE---AGFTSLAHSSDDIQHTITAAEKVLR 409 (411)
Q Consensus 360 ~~~~~~~~~~~l~~~Gi~v~~~----~~~---~~~~~~~~t~~~i~~~i~~l~~~~~ 409 (411)
.++++..+.+.|.++|+.+.-- ++- ...+.....++++++.++++++.++
T Consensus 9 qd~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 9 QDEDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCK 65 (109)
T ss_dssp EHHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH-
T ss_pred cHhhHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhc
Confidence 3567789999999999987543 211 1234567788999999999998775
No 409
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=52.70 E-value=39 Score=30.73 Aligned_cols=54 Identities=17% Similarity=0.218 Sum_probs=33.6
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
.+.+.+.+++.-.+-.+|++...-+.+ .+.+++.+|.++|++.|..+++|-.-.
T Consensus 116 ~~~~l~~~~~~l~~~d~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 116 LEQFLEQLKALLESDDIVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred HHHHHHHHHHhcccCCEEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 444444444311122335554433322 346779999999999999999997664
No 410
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=49.86 E-value=52 Score=30.76 Aligned_cols=91 Identities=18% Similarity=0.115 Sum_probs=41.7
Q ss_pred CHHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchh
Q 015230 169 DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT 247 (411)
Q Consensus 169 d~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~ 247 (411)
+.++.++.+++. .....-|+..-..++ ..-..-.+.+++|.++|+++|.-+++|=.-.- +..+|..++-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe-~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~~--------l~~lg~~~~dl 82 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPE-DDPEDYLERLKELLKLAKELGMEVIADISPKV--------LKKLGISYDDL 82 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE----------HHHHHHHHHHHHHHCT-EEEEEE-CCH--------HHTTT-BTTBT
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCC-CCHHHHHHHHHHHHHHHHHCCCEEEEECCHHH--------HHHcCCCHHHH
Confidence 355556666542 123333333222222 22222234488999999999999999965542 33344443222
Q ss_pred hhhhhcc-CCcccccccccHHH
Q 015230 248 TLGKIIG-GGLPVGAYGGRRDI 268 (411)
Q Consensus 248 ~~sK~~~-~G~~~g~~~~~~~~ 268 (411)
..=|.+| .|+|+=+-...+++
T Consensus 83 ~~~~~lGi~~lRlD~Gf~~~~i 104 (357)
T PF05913_consen 83 SFFKELGIDGLRLDYGFSGEEI 104 (357)
T ss_dssp HHHHHHT-SEEEESSS-SCHHH
T ss_pred HHHHHcCCCEEEECCCCCHHHH
Confidence 2234455 45665554444443
No 411
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=49.81 E-value=82 Score=28.26 Aligned_cols=110 Identities=15% Similarity=0.036 Sum_probs=56.8
Q ss_pred CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCch-hhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCC
Q 015230 91 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 169 (411)
Q Consensus 91 ~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 169 (411)
....+++|.|-+..+..+|..++...++-+|++.+..-+.... .+..+... +.++..++ |
T Consensus 106 ~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~-----------------gi~v~~i~--d 166 (282)
T PF01008_consen 106 NDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEA-----------------GIPVTLIP--D 166 (282)
T ss_dssp -TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHT-----------------T-EEEEE---G
T ss_pred cCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhc-----------------ceeEEEEe--c
Confidence 4577888889999999988776554445567776654332111 11111111 11222232 3
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
..+-..+.+ .-+..++=.+.+..+||.+...= -..++-.|+++++++++=
T Consensus 167 -~~~~~~m~~-~vd~VliGad~v~~nG~v~nk~G--t~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 167 -SAVGYVMPR-DVDKVLIGADAVLANGGVVNKVG--TLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp -GGHHHHHHC-TESEEEEE-SEEETTS-EEEETT--HHHHHHHHHHTT-EEEEE
T ss_pred -hHHHHHHHH-hCCeeEEeeeEEecCCCEeehhh--HHHHHHHHHhhCCCEEEE
Confidence 344555653 01233444555777777766544 567788999999998865
No 412
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=48.23 E-value=32 Score=31.07 Aligned_cols=97 Identities=13% Similarity=0.168 Sum_probs=64.7
Q ss_pred HHHHcCCCcEEEEEEcccCCC-CCccCCCHHHHHHHHHHHHHhCCEEEE---eccccccccc-------cCccccccCCC
Q 015230 175 NLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIF---DEVMTGFRLA-------YGGAQEYFGVT 243 (411)
Q Consensus 175 ~~~~~~~~~~~~vi~~~~~~~-~G~~~~~~~~l~~i~~l~~~~~~~li~---De~~~g~~~g-------~~~~~~~~~~~ 243 (411)
..++.. ++++++++-+++. .|....-.+++..|.-++.+.++++|. +|++..+.+. ..+....|..+
T Consensus 139 ~llr~~--~vrmLIIDE~H~lLaGs~~~qr~~Ln~LK~L~NeL~ipiV~vGt~~A~~al~~D~QLa~RF~~~~Lp~W~~d 216 (302)
T PF05621_consen 139 RLLRRL--GVRMLIIDEFHNLLAGSYRKQREFLNALKFLGNELQIPIVGVGTREAYRALRTDPQLASRFEPFELPRWELD 216 (302)
T ss_pred HHHHHc--CCcEEEeechHHHhcccHHHHHHHHHHHHHHhhccCCCeEEeccHHHHHHhccCHHHHhccCCccCCCCCCC
Confidence 455543 6889999998885 788888889999999999999998883 4444333221 23344566666
Q ss_pred cchhhhhhhccCCcccccc--cccHHHHHHhc
Q 015230 244 PDLTTLGKIIGGGLPVGAY--GGRRDIMEMVA 273 (411)
Q Consensus 244 ~d~~~~sK~~~~G~~~g~~--~~~~~~~~~~~ 273 (411)
.+...+=++|-..+|+..- ...+++...+-
T Consensus 217 ~ef~~LL~s~e~~LPLr~~S~l~~~~la~~i~ 248 (302)
T PF05621_consen 217 EEFRRLLASFERALPLRKPSNLASPELARRIH 248 (302)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHH
Confidence 6776666666655554322 34566666654
No 413
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=48.07 E-value=38 Score=28.17 Aligned_cols=53 Identities=17% Similarity=0.340 Sum_probs=30.6
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCc-cCCC---HHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGF-IAPK---PDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~-~~~~---~~~l~~i~~l~~~~~~~li~ 222 (411)
+++.+++.+.+. .++.+|++++...-.+. .... ..+++.+.++|+++|+.+++
T Consensus 128 ~~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 356677777752 25789999997755332 2111 35789999999999987653
No 414
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=47.78 E-value=2e+02 Score=26.79 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=32.0
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+..++.+.++. -++=++++-....|.++. ..+|+++|+.+|+.+..
T Consensus 246 ~~~~~~~li~~----~a~div~~d~~~~GGit~----~~~ia~~A~a~gi~~~~ 291 (352)
T cd03328 246 TLAYFRRLLEA----HAVDVLQADVTRCGGVTG----FLQAAALAAAHHVDLSA 291 (352)
T ss_pred CHHHHHHHHHc----CCCCEEecCccccCCHHH----HHHHHHHHHHcCCeecc
Confidence 57788888873 233445554455556666 88999999999987664
No 415
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=47.33 E-value=1.5e+02 Score=28.00 Aligned_cols=55 Identities=18% Similarity=0.310 Sum_probs=34.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~ 229 (411)
+.+.+-+.++..-.+..++++ +.++ =|.+.+ .+.+.++||++++++.+|-==.+|
T Consensus 129 ~~~~ll~~~~~~l~~~~~vVL-SDY~-KG~L~~----~q~~I~~ar~~~~pVLvDPKg~Df 183 (467)
T COG2870 129 DENKLLEKIKNALKSFDALVL-SDYA-KGVLTN----VQKMIDLAREAGIPVLVDPKGKDF 183 (467)
T ss_pred hHHHHHHHHHHHhhcCCEEEE-eccc-cccchh----HHHHHHHHHHcCCcEEECCCCcch
Confidence 334444444432123445555 3333 356666 999999999999999999655555
No 416
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=46.96 E-value=21 Score=25.20 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=20.4
Q ss_pred HHHHHHHHHHhCCEEEEecccc
Q 015230 206 LNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~~~ 227 (411)
-++|+++++++|++++.|..-+
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 7899999999999999998775
No 417
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=46.17 E-value=2.5e+02 Score=26.19 Aligned_cols=55 Identities=13% Similarity=0.052 Sum_probs=35.2
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEcccC---C--CCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN--KGEIAAIILEPVV---G--NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~~~~---~--~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
+++++..+.+.. .++...++|+... . .+-...+ +..|..+.+.+++++|+|-.|+
T Consensus 220 t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~d----l~ai~~lk~~~~lPVi~DpsH~ 281 (352)
T PRK13396 220 TIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLD----LSVIPVLRSLTHLPIMIDPSHG 281 (352)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcC----HHHHHHHHHhhCCCEEECCccc
Confidence 555555554431 2345677777622 1 1222223 8999999888899999999997
No 418
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=44.47 E-value=2.3e+02 Score=25.18 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=34.1
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEcccCCCC-CccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN--KGEIAAIILEPVVGNS-GFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~~~~~~~-G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
++++++.+++.. .+...+++++...++. +.-....+ +..|..+.++++++|++|-.|+
T Consensus 144 t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~d-l~~i~~lk~~~~~pV~~ds~Hs 204 (260)
T TIGR01361 144 TIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLD-LSAVPVLKKETHLPIIVDPSHA 204 (260)
T ss_pred CHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcC-HHHHHHHHHhhCCCEEEcCCCC
Confidence 556665555531 1233455565422221 21111122 8999999988999999998887
No 419
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=44.28 E-value=53 Score=21.59 Aligned_cols=45 Identities=7% Similarity=-0.070 Sum_probs=35.5
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.+.++.+..-+...+.+.+...+++.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 467788888888887665555678888889999999999987765
No 420
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=44.25 E-value=2.8e+02 Score=26.08 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=34.7
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEc-ccC--CCCCcc-CCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN--KGEIAAIILE-PVV--GNSGFI-APKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~-~~~--~~~G~~-~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
++++++.+++.. .++...++++ .+. +..+.. .+ +..|..+.+++++++++|-.|+
T Consensus 237 t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ld----l~~i~~lk~~~~~PV~~d~~Hs 297 (360)
T PRK12595 237 TIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLD----ISAVPILKQETHLPVMVDVTHS 297 (360)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcC----HHHHHHHHHHhCCCEEEeCCCC
Confidence 566666555531 1234467776 322 222222 23 8999999999999999998886
No 421
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=44.24 E-value=31 Score=31.64 Aligned_cols=58 Identities=10% Similarity=0.240 Sum_probs=35.8
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
+.+.+++.+++. .+++++|++ -++++||....+....++|.++..+.-+++++++.-+
T Consensus 81 ~~~~~~~~l~~~~~~~~vk~vvL-~inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA 140 (317)
T COG0616 81 GGDDIEEILRAARADPSVKAVVL-RINSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA 140 (317)
T ss_pred cHHHHHHHHHHHhcCCCCceEEE-EEECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec
Confidence 455555555541 123444433 3557788888877777777777777656677776553
No 422
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=43.97 E-value=2.1e+02 Score=24.55 Aligned_cols=38 Identities=13% Similarity=0.024 Sum_probs=29.6
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+.++++++++. -+-|++.|.. -.++.+.|+++|++++-
T Consensus 77 ~~~~~~~a~~a----GA~FivsP~~------------~~~v~~~~~~~~i~~iP 114 (213)
T PRK06552 77 DAVTARLAILA----GAQFIVSPSF------------NRETAKICNLYQIPYLP 114 (213)
T ss_pred CHHHHHHHHHc----CCCEEECCCC------------CHHHHHHHHHcCCCEEC
Confidence 78888888873 3567777754 55889999999998884
No 423
>KOG1564 consensus DNA repair protein RHP57 [Replication, recombination and repair]
Probab=43.36 E-value=1.6e+02 Score=26.44 Aligned_cols=72 Identities=14% Similarity=0.244 Sum_probs=45.4
Q ss_pred CCCCCCceeecCCCCHHHHHHHHHc------CCCcEEEEEEcccCCCCCc---cCCC-----HHH----HHHHHHHHHHh
Q 015230 155 PKGATYETLTAPFNDVSALENLFEN------NKGEIAAIILEPVVGNSGF---IAPK-----PDF----LNAIRRITKEN 216 (411)
Q Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~~~~vi~~~~~~~~G~---~~~~-----~~~----l~~i~~l~~~~ 216 (411)
...++..++....+|++.++..+.. ..++++.||++++-..-.. +.++ ..+ -.++.+++++|
T Consensus 173 ~~Npgd~IFv~~~~d~d~l~~iv~~qlPiL~~r~~i~LVIiDSVAa~fR~E~d~~~Sdl~~r~~~l~rla~~Lr~LA~~~ 252 (351)
T KOG1564|consen 173 NDNPGDHIFVENVHDVDHLLHIVNRQLPILLNRKKIKLVIIDSVAALFRSEFDYNPSDLKKRARHLFRLAGKLRQLASKF 252 (351)
T ss_pred ccCCCceEEEEeccchhhHHHHHhhhccceeccCcceEEEEehhhHHHHHHhccChhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 3445666777778899998888775 2357889999987543211 1111 222 34567789999
Q ss_pred CCEEE-Eeccc
Q 015230 217 GALLI-FDEVM 226 (411)
Q Consensus 217 ~~~li-~De~~ 226 (411)
+..|+ +..|-
T Consensus 253 ~~aVV~~NQVt 263 (351)
T KOG1564|consen 253 DLAVVCANQVT 263 (351)
T ss_pred CccEEEeeccc
Confidence 98655 44433
No 424
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=42.36 E-value=58 Score=30.88 Aligned_cols=60 Identities=7% Similarity=0.203 Sum_probs=42.2
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccC--------CCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVV--------GNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~--------~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+.+-++..+++++.+.+++. ++.++++++++ +..|.+..-++--.+|.++|+++++.++.
T Consensus 148 ~l~l~aEt~~e~I~~~l~~~--~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 148 NLYLLAETNLEDIIAELEQE--KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred ceEEehhcCHHHHHHHHHhc--CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 45555566899999999864 67788888766 22355554445567788899999986653
No 425
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=41.90 E-value=2.7e+02 Score=25.35 Aligned_cols=95 Identities=14% Similarity=0.238 Sum_probs=52.6
Q ss_pred CCcEEEEEeC-CcCCCchhhhhhcCCCCcccCCCCCCCCCCCCCCceeecCCCCHHHHHHHHHcC-CCcEEEEEEcccCC
Q 015230 117 GRERIIKFEG-CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGEIAAIILEPVVG 194 (411)
Q Consensus 117 ~~~~vi~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~-~~~~~~vi~~~~~~ 194 (411)
+..+|++.+. +|-|.........+.+ ....+...-.|.+.+.++++++ ++.+.=+-.|+ +
T Consensus 25 ~d~~v~~~DkLTYAgn~~~l~~~~~~~----------------~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAES--H 86 (340)
T COG1088 25 PDDHVVNLDKLTYAGNLENLADVEDSP----------------RYRFVQGDICDRELVDRLFKEYQPDAVVHFAAES--H 86 (340)
T ss_pred CCceEEEEecccccCCHHHHHhhhcCC----------------CceEEeccccCHHHHHHHHHhcCCCeEEEechhc--c
Confidence 4455666665 7777655443333321 1122233333788888888864 22222233343 2
Q ss_pred CCCccCCCHHHHH-------HHHHHHHHhCC---EE--EEecccccc
Q 015230 195 NSGFIAPKPDFLN-------AIRRITKENGA---LL--IFDEVMTGF 229 (411)
Q Consensus 195 ~~G~~~~~~~~l~-------~i~~l~~~~~~---~l--i~De~~~g~ 229 (411)
....+..|..|++ .|.+.+++|.. ++ =-||||..+
T Consensus 87 VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l 133 (340)
T COG1088 87 VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDL 133 (340)
T ss_pred ccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccc
Confidence 3444555555554 58888999873 22 379999766
No 426
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=41.77 E-value=2.2e+02 Score=24.24 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=46.1
Q ss_pred CHHHHHHHHHcCCCcEEE-EEEcccC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccccccccCccccccCCC--c
Q 015230 169 DVSALENLFENNKGEIAA-IILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVT--P 244 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~-vi~~~~~-~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~--~ 244 (411)
+++.+...+... +.++. +-+.|.- ..|+...-.-.+++++.++++||++++++=- .+.+++++. -
T Consensus 117 g~dHVLAKlAa~-n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VISS----------~A~s~~~lRsPR 185 (216)
T PRK03892 117 GIDHVLARMAAK-RGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFITS----------SAESKWEVRGPR 185 (216)
T ss_pred CccHHHHHHHHH-cCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEec----------CcchhccCCCHH
Confidence 355555444432 24443 5566654 4466666666779999999999999887642 122334442 3
Q ss_pred chhhhhhhcc
Q 015230 245 DLTTLGKIIG 254 (411)
Q Consensus 245 d~~~~sK~~~ 254 (411)
|+.++...+|
T Consensus 186 dl~aL~~~iG 195 (216)
T PRK03892 186 DLMSLGINIG 195 (216)
T ss_pred HHHHHHHHhC
Confidence 6777777766
No 427
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=41.52 E-value=2.8e+02 Score=25.28 Aligned_cols=36 Identities=28% Similarity=0.478 Sum_probs=24.4
Q ss_pred ccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccccc
Q 015230 191 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228 (411)
Q Consensus 191 ~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g 228 (411)
....-+|.-.+.+|.++.+..+++..|++ .|=+|+|
T Consensus 249 ~dy~~~~Yg~p~~e~~e~i~~~~~~eGil--lDpVYtg 284 (323)
T COG2515 249 DDYHHPGYGKPNEEDIEAIKLLARLEGIL--LDPVYTG 284 (323)
T ss_pred ecccCCccCCcCHHHHHHHHHHHHhhCcc--cccccch
Confidence 33333444456667788888888888874 5888864
No 428
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=41.22 E-value=61 Score=24.87 Aligned_cols=47 Identities=19% Similarity=0.101 Sum_probs=28.9
Q ss_pred CHHHHHHHHHcC-CCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~-~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+.+.+.+.+++- ..+.+++++....... .+ =+++.+.|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~-~i------P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD-EI------PEEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc-cC------CHHHHHHHHHcCCCEEE
Confidence 344455555541 2357777775532211 22 35889999999999884
No 429
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=41.08 E-value=2.6e+02 Score=24.77 Aligned_cols=47 Identities=15% Similarity=0.190 Sum_probs=30.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+..++.+.++.. ..-.+.+.+. ..|.+.. ..++.++|+++|+.+.+-
T Consensus 187 ~~~~~~~~~~~~--~~d~v~~k~~--~~GGit~----~~~i~~~a~~~gi~~~~~ 233 (263)
T cd03320 187 RLDDPLALAAAG--ALGALVLKPA--LLGGPRA----LLELAEEARARGIPAVVS 233 (263)
T ss_pred cccCHHHHHhcC--CCCEEEECch--hcCCHHH----HHHHHHHHHHcCCCEEEE
Confidence 345566666632 3344555543 3455666 899999999999987765
No 430
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=40.44 E-value=2.4e+02 Score=24.17 Aligned_cols=54 Identities=17% Similarity=0.219 Sum_probs=34.6
Q ss_pred ceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 161 ETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 161 ~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
.++..+++|.+.|.++++ +.-.+|++.+..+ ....+....+.+.|++.|+-.++
T Consensus 46 ~vv~~d~~~~~~l~~al~---g~d~v~~~~~~~~-----~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 46 EVVEADYDDPESLVAALK---GVDAVFSVTPPSH-----PSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEEES-TT-HHHHHHHHT---TCSEEEEESSCSC-----CCHHHHHHHHHHHHHHHT-SEEE
T ss_pred eEeecccCCHHHHHHHHc---CCceEEeecCcch-----hhhhhhhhhHHHhhhccccceEE
Confidence 455666668999999998 3344565655443 33445588899999999985553
No 431
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=40.21 E-value=48 Score=28.01 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=28.2
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
.+.+++||-.+. .|.... ..++.++|++|++++|
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLI 190 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEE
Confidence 468888888765 566666 8899999999999987
No 432
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=40.00 E-value=63 Score=21.19 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.+.||-+.........+++...+++.++++.+|.+.+
T Consensus 18 ~~~if~aL~~~~I~v~~~~~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 18 MAKIVGALSKEGIEILQTADSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHCCCCEEEEEcCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 468888999999988644434567788889999999999988765
No 433
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=38.92 E-value=40 Score=28.39 Aligned_cols=35 Identities=20% Similarity=0.265 Sum_probs=27.8
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
-++.++++|=.+. .|.... .+++.+++++|++++|
T Consensus 151 l~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 151 LSPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIV 185 (194)
T ss_dssp S-SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEE
T ss_pred CCCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEE
Confidence 3578888888766 566777 9999999999999988
No 434
>TIGR00161 conserved hypothetical protein TIGR00161. This ortholog set includes MJ0106 from Methanococcus jannaschii and AF1251 from Archaeoglobus fulgidus, but not MJ1210 or AF0525.
Probab=38.31 E-value=2e+02 Score=25.06 Aligned_cols=42 Identities=14% Similarity=0.084 Sum_probs=25.4
Q ss_pred CCCCHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHHHHHHHHH
Q 015230 284 LSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAG 325 (411)
Q Consensus 284 ~~~~~~~~a~~~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~~~ 325 (411)
..++|-|+++...+++.+.. +=-.+.+.+.++..++.++++.
T Consensus 179 ~~PDP~AA~~ll~~l~~l~~~~id~~~L~e~Ae~ie~~~~el~ 221 (238)
T TIGR00161 179 PYPDPRAAASLVEVLNKMLNTNVDPEPLLKEAEAIESRLKKLA 221 (238)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 35778888888888876655 2123445555555555555543
No 435
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=37.34 E-value=2.4e+02 Score=26.09 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=22.8
Q ss_pred EcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 189 ~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
.+.+..+|+.+..-= --.++-+|++|++++++=
T Consensus 223 Ad~I~aNG~v~NKiG--T~~lAl~Ak~~~VPfyV~ 255 (329)
T PRK06371 223 ADRIASNGDFANKIG--TYEKAVLAKVNGIPFYVA 255 (329)
T ss_pred ccEEecCCCEeehhh--HHHHHHHHHHcCCCEEEe
Confidence 455667776665422 456778899999998863
No 436
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=36.81 E-value=2.7e+02 Score=23.72 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=36.2
Q ss_pred eeecCCCCHHHHHHHHHcC-----CCcEEEEEEcccCCCCC-ccCC----------CHHHHHHHHHHHHHhCCEEE-Eec
Q 015230 162 TLTAPFNDVSALENLFENN-----KGEIAAIILEPVVGNSG-FIAP----------KPDFLNAIRRITKENGALLI-FDE 224 (411)
Q Consensus 162 ~~~~~~~d~~~l~~~~~~~-----~~~~~~vi~~~~~~~~G-~~~~----------~~~~l~~i~~l~~~~~~~li-~De 224 (411)
+......+.+++...++.. ..++.+|++++...--. .... -.+++..|..+|+++++.+| ...
T Consensus 88 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~tnq 167 (226)
T cd01393 88 IYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVFTNQ 167 (226)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEE
Confidence 3333334555555444431 34788999999764211 1111 12345668889999998666 444
Q ss_pred cc
Q 015230 225 VM 226 (411)
Q Consensus 225 ~~ 226 (411)
+.
T Consensus 168 ~~ 169 (226)
T cd01393 168 VR 169 (226)
T ss_pred Ee
Confidence 44
No 437
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=36.37 E-value=2.4e+02 Score=25.11 Aligned_cols=77 Identities=8% Similarity=-0.053 Sum_probs=45.6
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHhcC-CceEEeeecceEEEEE----------ecCCCCCcchhcccchHHHHHHHHHHH
Q 015230 304 PGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFF----------TEGPVYNFEDAKKSETTKFARFYRGML 372 (411)
Q Consensus 304 ~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~g~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 372 (411)
.+..++++++.+.|..+|.++-.+.. ....+.+.|++++-+- .............|-.....++...++
T Consensus 176 p~~~a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~~ygl~~~G~fTVsPev~PGA~rl~~Ir~~l~ 255 (318)
T COG4531 176 PQNAAKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFENAYGLKPLGHFTVSPEVQPGAKRLAEIRTQLK 255 (318)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHHhhCccccceEEeCcccCccHHHHHHHHHHHH
Confidence 56677788888888888876644433 3344566777776652 111111222223344455677888899
Q ss_pred HcCeEecc
Q 015230 373 EEGVYFAP 380 (411)
Q Consensus 373 ~~Gi~v~~ 380 (411)
++|.-+.-
T Consensus 256 e~~a~CvF 263 (318)
T COG4531 256 EQKATCVF 263 (318)
T ss_pred HhCCcEEe
Confidence 98775543
No 438
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=36.25 E-value=1.3e+02 Score=23.69 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=32.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHH-HHhCCEEE-Eecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT-KENGALLI-FDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~-~~~~~~li-~De~~~ 227 (411)
+.+.+.+.++++ ++..|++=-+.++.|...+....+++..+.. ++++++++ +||-++
T Consensus 42 ~~~~l~~~i~~~--~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~~v~~~DEr~T 100 (138)
T PRK00109 42 DWDRLEKLIKEW--QPDGLVVGLPLNMDGTEGPRTERARKFANRLEGRFGLPVVLVDERLS 100 (138)
T ss_pred HHHHHHHHHHHh--CCCEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 477788888865 4455555433344555544333344444433 34577554 999997
No 439
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=35.93 E-value=89 Score=20.75 Aligned_cols=46 Identities=22% Similarity=0.201 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHcCeEe--ccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 363 KFARFYRGMLEEGVYF--APSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 363 ~~~~~~~~l~~~Gi~v--~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
-+.++.+.|.+.||-+ ..-+.....+++...+++.++++..|-+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 3468888899998877 222323467778888999999999998765
No 440
>PRK15440 L-rhamnonate dehydratase; Provisional
Probab=35.48 E-value=2.6e+02 Score=26.60 Aligned_cols=46 Identities=26% Similarity=0.369 Sum_probs=30.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+..++++.++. -++=++++-....|.++. ..+|+++|+.+|+.++.
T Consensus 272 ~~~~~~~li~~----~a~Divq~d~~~~GGit~----~~kia~lA~a~gi~~~p 317 (394)
T PRK15440 272 TLQGFRTLLEM----GCIDIIQPDVGWCGGLTE----LVKIAALAKARGQLVVP 317 (394)
T ss_pred CHHHHHHHHHc----CCCCEEeCCccccCCHHH----HHHHHHHHHHcCCeecc
Confidence 45666666663 233445565555555666 88999999999987644
No 441
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=35.44 E-value=1.8e+02 Score=22.02 Aligned_cols=46 Identities=20% Similarity=0.187 Sum_probs=31.1
Q ss_pred HHHHHHHHcCCCcEEEEEEcccC-CCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 171 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 171 ~~l~~~~~~~~~~~~~vi~~~~~-~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
..+.+.+.. +++.+|+..|.. +..+...+ -..|++.|.+|+++++.
T Consensus 60 ~~i~~~i~~--g~i~~VInt~~~~~~~~~~~d----g~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAE--GEIDAVIFFRDPLTAQPHEPD----VKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHc--CceeEEEEcCCCCCCCccccc----HHHHHHHHHHcCCCEEE
Confidence 345566663 478888877753 32222333 78999999999999874
No 442
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=35.43 E-value=3.1e+02 Score=24.17 Aligned_cols=47 Identities=6% Similarity=0.080 Sum_probs=32.2
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+..++++.++.. ..-++.+.+ ...|.+.. ..++.++|+++|+.++.=
T Consensus 191 ~~~~~~~~i~~~--~~d~v~~k~--~~~GGi~~----~~~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 191 TPHDAFRELALG--AADAVNIKT--AKTGGLTK----AQRVLAVAEALGLPVMVG 237 (265)
T ss_pred CHHHHHHHHHhC--CCCEEEEec--ccccCHHH----HHHHHHHHHHcCCcEEec
Confidence 677788877742 344455544 33455666 889999999999977764
No 443
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=34.81 E-value=2.6e+02 Score=25.96 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=30.1
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+++++++.++.. ..-+ +++-....|.+.. ..++.++|+++|+.++.
T Consensus 251 ~~~~~~~~i~~~--~~d~--v~~k~~~~GGi~~----~~~i~~~a~~~g~~~~~ 296 (357)
T cd03316 251 TRWEFRDLLEAG--AVDI--IQPDVTKVGGITE----AKKIAALAEAHGVRVAP 296 (357)
T ss_pred cHHHHHHHHHhC--CCCE--EecCccccCCHHH----HHHHHHHHHHcCCeEec
Confidence 678888887732 2223 3333344455666 88999999999987654
No 444
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=34.79 E-value=86 Score=24.51 Aligned_cols=19 Identities=21% Similarity=0.225 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHhCCEEE
Q 015230 203 PDFLNAIRRITKENGALLI 221 (411)
Q Consensus 203 ~~~l~~i~~l~~~~~~~li 221 (411)
.+++.++.+.|++.|+-++
T Consensus 43 ~Dllge~v~a~h~~Girv~ 61 (132)
T PF14871_consen 43 RDLLGEQVEACHERGIRVP 61 (132)
T ss_pred cCHHHHHHHHHHHCCCEEE
Confidence 4679999999999998665
No 445
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=34.79 E-value=89 Score=25.67 Aligned_cols=52 Identities=17% Similarity=0.140 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCcc--CCC----HHHHHHHHHHHHHhCCEEE
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFI--APK----PDFLNAIRRITKENGALLI 221 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~--~~~----~~~l~~i~~l~~~~~~~li 221 (411)
++.+-+.+++...+..++++.|........ ... .++-+.+.++|+++++.+|
T Consensus 95 l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 95 YETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 344444444333455677776643221111 111 2456678899999998775
No 446
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=34.48 E-value=96 Score=27.59 Aligned_cols=36 Identities=22% Similarity=0.289 Sum_probs=24.9
Q ss_pred EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 187 vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+++-|-...+|....+...+++|.++|+++++.+|+
T Consensus 42 lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 42 LVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred EEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 444454444554444556799999999999998774
No 447
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=34.24 E-value=1.2e+02 Score=24.02 Aligned_cols=57 Identities=16% Similarity=0.314 Sum_probs=33.8
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHH-HhCCEEE-Eecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK-ENGALLI-FDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~-~~~~~li-~De~~~ 227 (411)
+.+.+.+.++++ ++..|++--+.++.|...+..+..++..+..+ +.+++++ .||=.+
T Consensus 41 ~~~~l~~li~~~--~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERlt 99 (141)
T COG0816 41 DFNALLKLVKEY--QVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLS 99 (141)
T ss_pred hHHHHHHHHHHh--CCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccC
Confidence 778888888875 55555554444454544444444555555444 4567555 888664
No 448
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=33.88 E-value=69 Score=27.45 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=29.7
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE-Eec
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI-FDE 224 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li-~De 224 (411)
.+.+++||-++.. |.... ..++.++|++|+++++ ++|
T Consensus 168 ~p~~vicEil~~d-G~ma~----~~~l~~fA~~h~l~~isi~d 205 (218)
T PRK00910 168 QPAGVLCELTNPD-GTMAK----TPEIIAFGKLHNMPVLTIED 205 (218)
T ss_pred CceEEEEEEecCC-CCcCC----HHHHHHHHHHcCCcEEEHHH
Confidence 4688888887754 66666 8999999999999987 454
No 449
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=33.51 E-value=79 Score=29.79 Aligned_cols=56 Identities=11% Similarity=0.170 Sum_probs=36.8
Q ss_pred cCCCCHHHHHHHHHcCCCcEEEEEEcccCCCC--------CccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 165 APFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 165 ~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~--------G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
....+++.+.+.+++. ++..+++++.+... |....-.+.+.+|.++++++++.++.
T Consensus 142 ~~e~~le~I~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 142 LAETNLEDILASIEEL--KPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EccCcHHHHHHHHHhc--CCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 3444788888888753 67889999976431 11221134456788999999986653
No 450
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=33.16 E-value=3.8e+02 Score=24.92 Aligned_cols=46 Identities=20% Similarity=0.295 Sum_probs=29.6
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+++++.+.++.. . +=++++-....|.++. ..++.++|+++|+.+..
T Consensus 238 ~~~~~~~~~~~~--~--~d~v~~d~~~~GGit~----~~~~~~lA~~~gi~~~~ 283 (352)
T cd03325 238 SRWDFKELLEDG--A--VDIIQPDISHAGGITE----LKKIAAMAEAYDVALAP 283 (352)
T ss_pred CHHHHHHHHHhC--C--CCEEecCccccCCHHH----HHHHHHHHHHcCCcEec
Confidence 566777776631 2 2234444444566666 88999999999987663
No 451
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=32.96 E-value=2e+02 Score=21.06 Aligned_cols=58 Identities=19% Similarity=0.303 Sum_probs=33.6
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcc-cCCCCCccCCCHHHHHHHHHHHHHhCC-EEEEecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGA-LLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~-~~~~~G~~~~~~~~l~~i~~l~~~~~~-~li~De~~~ 227 (411)
.+++++.+.+...-.+..-++.. ..+....+.- ..-+++|.++++++++ .+|+|+--+
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG-~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYIG-SGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceeec-hhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 46677777665444555433333 2223333322 2229999999999987 566775443
No 452
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=32.89 E-value=3.2e+02 Score=23.48 Aligned_cols=46 Identities=11% Similarity=0.181 Sum_probs=29.4
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+.+++.+.++.. ...++.+.+ +..|.+.. ..++.++|+++|+.++.
T Consensus 156 ~~~~~~~~~~~~--~~d~~~~k~--~~~GGi~~----~~~i~~~a~~~gi~~~~ 201 (229)
T cd00308 156 TVDDALEALELG--AVDILQIKP--TRVGGLTE----SRRAADLAEAFGIRVMV 201 (229)
T ss_pred CHHHHHHHHHcC--CCCEEecCc--cccCCHHH----HHHHHHHHHHcCCEEee
Confidence 566666666632 233444444 33455665 88999999999997765
No 453
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.86 E-value=89 Score=19.90 Aligned_cols=45 Identities=16% Similarity=0.226 Sum_probs=32.4
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.+.|+-+..-......+.+...+++.++++++|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 17 AAKMFKALAEAGINIEMISTSEIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCCEEEEEccCCeEEEEEeHHHHHHHHHHHHHHh
Confidence 357888888888766443322356677888899999998888765
No 454
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=32.47 E-value=1.2e+02 Score=22.63 Aligned_cols=44 Identities=11% Similarity=0.132 Sum_probs=29.2
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
.+.+++.++. ++.++|++-..-+. +..+++.+.|+.++++++.-
T Consensus 22 ~~~v~~aik~--gk~~lVI~A~D~s~--------~~kkki~~~~~~~~vp~~~~ 65 (104)
T PRK05583 22 YNKCEEAIKK--KKVYLIIISNDISE--------NSKNKFKNYCNKYNIPYIEG 65 (104)
T ss_pred HHHHHHHHHc--CCceEEEEeCCCCH--------hHHHHHHHHHHHcCCCEEEe
Confidence 3566677774 35666666443322 22899999999999987543
No 455
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=32.37 E-value=1.5e+02 Score=24.89 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=22.9
Q ss_pred EEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 184 ~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
..+|++.-.+++.|.+.| .+.-+++++++|+.++
T Consensus 113 kvvILLTDG~n~~~~i~P----~~aAa~lA~~~gV~iy 146 (191)
T cd01455 113 AIVIVLSDANLERYGIQP----KKLADALAREPNVNAF 146 (191)
T ss_pred cEEEEEeCCCcCCCCCCh----HHHHHHHHHhCCCEEE
Confidence 345555555655666777 6556789999998654
No 456
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=32.34 E-value=1.1e+02 Score=20.11 Aligned_cols=45 Identities=16% Similarity=0.189 Sum_probs=33.3
Q ss_pred HHHHHHHHHHcCeEec--cCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFA--PSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~--~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++...|.+.||-+. .-+.....+++...+++.++++..|.+.+
T Consensus 17 ~~~i~~aL~~~~I~v~~i~~g~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 17 LERAFHVLYTKGVNVQMISQGASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHCCCCEEEEEecCccceEEEEEeHHHHHHHHHHHHHHH
Confidence 4688888999987662 22223467778888899999999987765
No 457
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=32.14 E-value=3.2e+02 Score=23.22 Aligned_cols=39 Identities=10% Similarity=0.167 Sum_probs=30.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
|.++++++++. -+-|++.|.. -.++.+.|++++++++--
T Consensus 65 ~~e~a~~ai~a----GA~FivSP~~------------~~~vi~~a~~~~i~~iPG 103 (201)
T PRK06015 65 NAKQFEDAAKA----GSRFIVSPGT------------TQELLAAANDSDVPLLPG 103 (201)
T ss_pred CHHHHHHHHHc----CCCEEECCCC------------CHHHHHHHHHcCCCEeCC
Confidence 78888888873 3557777754 558999999999988754
No 458
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=32.12 E-value=1.3e+02 Score=21.14 Aligned_cols=46 Identities=9% Similarity=0.248 Sum_probs=30.3
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecc
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 225 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~ 225 (411)
.+...+.+++ ++..++++-..-+ +...+.+.++|++++++++.-+.
T Consensus 16 ~~~v~kai~~--gkaklViiA~D~~--------~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 16 TKQTVKALKR--GSVKEVVVAEDAD--------PRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred HHHHHHHHHc--CCeeEEEEECCCC--------HHHHHHHHHHHHHcCCCEEEECC
Confidence 3555666764 4666666644222 23489999999999999875543
No 459
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.75 E-value=77 Score=27.39 Aligned_cols=39 Identities=18% Similarity=0.334 Sum_probs=30.6
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE-Eeccc
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI-FDEVM 226 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li-~De~~ 226 (411)
.+.+++||=.+.. |.... .+++.++|++|++++| ++|..
T Consensus 172 ~P~~vicEil~~d-G~ma~----~~~l~~fA~~~~l~iisi~dli 211 (230)
T PRK00014 172 RPAGVLCELMNAD-GTMMR----GASLERYAAKEGLVALAIDELA 211 (230)
T ss_pred CceEEEEEEeCCC-CCccC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 4688888886654 66666 9999999999999987 56644
No 460
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=31.49 E-value=31 Score=24.64 Aligned_cols=23 Identities=22% Similarity=0.251 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhCCEEEEeccccc
Q 015230 206 LNAIRRITKENGALLIFDEVMTG 228 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~~~g 228 (411)
-++|.+.|++||+++..|..-..
T Consensus 34 Ae~II~~Ake~~Vpi~edp~Lv~ 56 (92)
T COG2257 34 AEKIIEKAKEHGVPIQEDPLLVE 56 (92)
T ss_pred HHHHHHHHHHcCCCcccCHHHHH
Confidence 77999999999999999987753
No 461
>cd04917 ACT_AKiii-LysC-EC_2 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in bacteria (Escherichia coli (EC) LysC). Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The E. coli AKIII (LysC) binds two feedback allosteric inhibitor lysine molecules at the dimer interface located between the ACT1 domain of two subunits. The second ACT domain (ACT2), this CD, is not involved in the binding of heterotrophic effectors. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=31.27 E-value=1.2e+02 Score=19.65 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=32.8
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++...|.+.++.+..-+.....+++...+++.++++..|.+.+
T Consensus 18 ~~~i~~~L~~i~i~~i~~~~s~~~is~~V~~~~~~~a~~~Lh~~f 62 (64)
T cd04917 18 EKRIFDALEDINVRMICYGASNHNLCFLVKEEDKDEVVQRLHSRL 62 (64)
T ss_pred HHHHHHHHHhCCeEEEEEecCccEEEEEEeHHHHHHHHHHHHHHH
Confidence 356777777767766444444567788888999999999987764
No 462
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=30.91 E-value=1.3e+02 Score=23.44 Aligned_cols=57 Identities=18% Similarity=0.271 Sum_probs=32.7
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHH-HHHHhCCEEE-Eecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRR-ITKENGALLI-FDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~-l~~~~~~~li-~De~~~ 227 (411)
+.+.+.+.++++ ++..|++=-+.++.|...+.....++..+ +.+++++++. +||-++
T Consensus 36 ~~~~l~~~i~~~--~~~~iVvGlP~~~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKEW--TPDKIVVGLPLNMDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHc--CCCEEEEeccCCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 578888888865 44555554333444555543333333333 3445687555 999887
No 463
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional
Probab=30.80 E-value=2.4e+02 Score=23.75 Aligned_cols=38 Identities=8% Similarity=0.187 Sum_probs=26.9
Q ss_pred CcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 182 ~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+++.+++.......+|.... ++.+......+|..++-.
T Consensus 106 gK~~~~f~s~g~~~Gg~~~~----l~~l~~~~~~~gm~vv~~ 143 (200)
T PRK03767 106 GKVGSVFTSTGTQHGGQETT----ITSTHTTLLHHGMVIVGL 143 (200)
T ss_pred CCEEEEEEeCCCCCCChHHH----HHHHHHHHHHcCCEEeCC
Confidence 46777777665555665444 888999999999876654
No 464
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.59 E-value=83 Score=26.91 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=27.7
Q ss_pred cEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 183 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
.+.+++||-.+.. |.... ..++.++|++|+++++
T Consensus 167 ~p~~vicEil~~d-G~ma~----~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 167 KEAGVICEITNDD-GTMAR----TPEIVEFAKKFGYAVV 200 (214)
T ss_pred CceEEEEEEecCC-CCccC----HHHHHHHHHHcCCcEE
Confidence 4688888886544 66666 8999999999999987
No 465
>PF07282 OrfB_Zn_ribbon: Putative transposase DNA-binding domain; InterPro: IPR010095 This entry represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by IPR001959 from INTERPRO, and other proteins. More information about these proteins can be found at Protein of the Month: Transposase [].
Probab=30.42 E-value=73 Score=21.34 Aligned_cols=24 Identities=25% Similarity=0.404 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhCCEEE-Eecccc
Q 015230 204 DFLNAIRRITKENGALLI-FDEVMT 227 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li-~De~~~ 227 (411)
.+.+.|...|.++|+.++ +|+.++
T Consensus 3 ~~~~~L~yka~~~G~~v~~v~~~~T 27 (69)
T PF07282_consen 3 QFRQRLEYKAEEYGIQVVEVDEAYT 27 (69)
T ss_pred HHHHHHHHHHHHhCCEEEEECCCCC
Confidence 457788889999998666 898886
No 466
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=30.39 E-value=55 Score=19.73 Aligned_cols=23 Identities=13% Similarity=0.248 Sum_probs=17.8
Q ss_pred CCCHHHHHHHHHHHHHhCCEEEE
Q 015230 200 APKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 200 ~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
.++-+|++.|.+.+++||+.=|+
T Consensus 13 ~Dp~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 13 KDPLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HCHHHHHHHHHHHHhhCCEEEEE
Confidence 35567799999999999986553
No 467
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=30.24 E-value=2.9e+02 Score=22.15 Aligned_cols=49 Identities=10% Similarity=0.121 Sum_probs=26.0
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCC-CCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~-~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
++.+-+.+++. ....+++.+..+. .+. .....+-+.+.++|+++++.++
T Consensus 90 l~~li~~~~~~--~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 90 LRQMIETAQAR--GAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHHC--CCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 34444444433 3455666543222 121 1234556777789999998655
No 468
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=30.11 E-value=1.3e+02 Score=26.10 Aligned_cols=54 Identities=13% Similarity=0.137 Sum_probs=33.5
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEcccCCCC-Cc-cCCC----HHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENN--KGEIAAIILEPVVGNS-GF-IAPK----PDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~~~~~~~-G~-~~~~----~~~l~~i~~l~~~~~~~li~ 222 (411)
+++++++.++.. ..++..|++++.+... +. .... .++++.|.++|+++++.+++
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 566666655531 1267889999876431 21 1111 14577888999999987764
No 469
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=30.03 E-value=1.6e+02 Score=23.36 Aligned_cols=50 Identities=12% Similarity=0.119 Sum_probs=32.4
Q ss_pred HHHHHHHHcCCCcEEEEEEcccC-CCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 015230 171 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 226 (411)
Q Consensus 171 ~~l~~~~~~~~~~~~~vi~~~~~-~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~ 226 (411)
..+.+.+.+ +++.+|+..|.. +..+...+ -..|++.|-+|+++++..-.-
T Consensus 65 ~~i~~~I~~--g~i~lVInt~dp~~~~~~~~D----~~~IRR~Av~~~IP~~T~l~t 115 (142)
T PRK05234 65 QQIGALIAE--GKIDMLIFFRDPLTAQPHDPD----VKALLRLADVWNIPVATNRAT 115 (142)
T ss_pred hhHHHHHHc--CceeEEEEecCCCCCCcccch----HHHHHHHHHHcCCCEEcCHHH
Confidence 335566663 478888776622 22221223 779999999999999965433
No 470
>PRK04148 hypothetical protein; Provisional
Probab=29.98 E-value=2.7e+02 Score=21.82 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=20.8
Q ss_pred cCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 199 IAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 199 ~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+.|++|....|.+++++.|+.+++
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLII 107 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEE
Confidence 467889899999999999997765
No 471
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=29.95 E-value=2.3e+02 Score=20.93 Aligned_cols=44 Identities=14% Similarity=0.361 Sum_probs=28.5
Q ss_pred CCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 166 PFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 166 ~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
...|.+.+.+..+++ ++-++++-| +.-+..-|.+..++.|+.++
T Consensus 47 ~~~d~~~l~~~a~~~--~idlvvvGP----------E~pL~~Gl~D~l~~~gi~vf 90 (100)
T PF02844_consen 47 DITDPEELADFAKEN--KIDLVVVGP----------EAPLVAGLADALRAAGIPVF 90 (100)
T ss_dssp -TT-HHHHHHHHHHT--TESEEEESS----------HHHHHTTHHHHHHHTT-CEE
T ss_pred CCCCHHHHHHHHHHc--CCCEEEECC----------hHHHHHHHHHHHHHCCCcEE
Confidence 444788888877754 677777744 23336778888888888665
No 472
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=29.85 E-value=62 Score=32.65 Aligned_cols=26 Identities=23% Similarity=0.289 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhCCEEEEecccccc
Q 015230 204 DFLNAIRRITKENGALLIFDEVMTGF 229 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li~De~~~g~ 229 (411)
+-++++.+-|+++||-||+|=|+..|
T Consensus 214 edfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 214 EDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 44999999999999999999999877
No 473
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=29.56 E-value=61 Score=24.66 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=21.5
Q ss_pred CCHHHHHHHHHHHHHhCC-EEEEecccc
Q 015230 201 PKPDFLNAIRRITKENGA-LLIFDEVMT 227 (411)
Q Consensus 201 ~~~~~l~~i~~l~~~~~~-~li~De~~~ 227 (411)
...+.++.+.+..++++. +||+||++.
T Consensus 71 ~~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 71 TSDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp -HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 334557888888888887 999999996
No 474
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=29.55 E-value=4.1e+02 Score=23.65 Aligned_cols=92 Identities=12% Similarity=0.150 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHhhC--C-CCCEEEEeCChHHHHHHHHHHHHhccCCcEEEEEeCCcCCCchhhhhhcCCCCcccCCCCC
Q 015230 75 CLLENVLAEMVISAV--P-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 151 (411)
Q Consensus 75 ~~~~~~l~~~l~~~~--~-~~~~v~~~~~g~~a~~~al~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 151 (411)
.+...++..|+.+.- + ..+.|=- -+-++..=+++....-...++++.+.+|.|.
T Consensus 105 ~e~~~~~~~wLer~~i~~~~~~kIk~---LSKGnqQKIQfisaviHePeLlILDEPFSGL-------------------- 161 (300)
T COG4152 105 AEIQKKLQAWLERLEIVGKKTKKIKE---LSKGNQQKIQFISAVIHEPELLILDEPFSGL-------------------- 161 (300)
T ss_pred HHHHHHHHHHHHhccccccccchHHH---hhhhhhHHHHHHHHHhcCCCEEEecCCccCC--------------------
Confidence 445567777776533 1 2333321 2223333333322344667889999999872
Q ss_pred CCCCCCCCCceeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHH
Q 015230 152 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE 215 (411)
Q Consensus 152 ~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~ 215 (411)
+.+ +.+.|++.+.+..+.-+.|++..+. ++.+-++|++
T Consensus 162 DPV--------------N~elLk~~I~~lk~~GatIifSsH~------------Me~vEeLCD~ 199 (300)
T COG4152 162 DPV--------------NVELLKDAIFELKEEGATIIFSSHR------------MEHVEELCDR 199 (300)
T ss_pred Chh--------------hHHHHHHHHHHHHhcCCEEEEecch------------HHHHHHHhhh
Confidence 111 5778888777655556667775544 7778888876
No 475
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=29.34 E-value=1.2e+02 Score=22.27 Aligned_cols=49 Identities=27% Similarity=0.305 Sum_probs=28.1
Q ss_pred eeecCCCCHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 162 TLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 162 ~~~~~~~d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
.+..+-+..+.+..++.. ..+++++. |...+ -+++.++|++++++++.=
T Consensus 43 lvIt~gdR~di~~~a~~~---~i~~iIlt------g~~~~----~~~v~~la~~~~i~vi~t 91 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEA---GIACIILT------GGLEP----SEEVLELAKELGIPVIST 91 (105)
T ss_dssp EEEEETT-HHHHHHHCCT---TECEEEEE------TT--------HHHHHHHHHHT-EEEE-
T ss_pred EEEEeCCcHHHHHHHHHh---CCCEEEEe------CCCCC----CHHHHHHHHHCCCEEEEE
Confidence 444444456666666553 46777764 33445 568999999999988853
No 476
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=29.15 E-value=1.6e+02 Score=25.18 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=12.2
Q ss_pred HHHHHHHHHHhCCEEEEe
Q 015230 206 LNAIRRITKENGALLIFD 223 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~D 223 (411)
+++..++|++ +++|.|
T Consensus 199 VREtL~i~dR--aYIi~~ 214 (243)
T COG1137 199 VRETLDICDR--AYIISD 214 (243)
T ss_pred HHHHHhhhhe--EEEEec
Confidence 8888899887 566665
No 477
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=29.13 E-value=3.1e+02 Score=22.15 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=30.0
Q ss_pred HHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHH-hCCEEEEeccc
Q 015230 177 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVM 226 (411)
Q Consensus 177 ~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~-~~~~li~De~~ 226 (411)
+++..-..+.+-+..+....|......+...--..+++. ...++++|..-
T Consensus 88 l~~~~~d~afi~~~gi~~~~G~~~~~~~~a~vk~~~~~~s~~~ill~D~sK 138 (161)
T PF00455_consen 88 LRQFRFDKAFIGADGISEEGGLTTSDEEEAEVKRAMIENSKQVILLADSSK 138 (161)
T ss_pred HHhhccceEEecccEecCCCccccchHHHHHHHHHHHHhcCeEEEEeChhh
Confidence 343333566777777777778777666534434444443 35788888655
No 478
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=29.11 E-value=1.1e+02 Score=19.37 Aligned_cols=45 Identities=16% Similarity=0.208 Sum_probs=32.0
Q ss_pred HHHHHHHHHHcCeEeccCCCcceeeecCCCHHHHHHHHHHHHHHH
Q 015230 364 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVL 408 (411)
Q Consensus 364 ~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~t~~~i~~~i~~l~~~~ 408 (411)
..++.+.|.+.|+-+.--......+.+...+++.++++++|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 17 AAKMFEALAEAGINIEMISTSEIKISCLIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceEEEEEeHHHHHHHHHHHHHHh
Confidence 356888888888765433222356677888899999988887765
No 479
>COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily [Cell envelope biogenesis, outer membrane / General function prediction only]
Probab=29.06 E-value=4.6e+02 Score=24.60 Aligned_cols=45 Identities=20% Similarity=0.191 Sum_probs=26.5
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
...++++.++. .++=++++-....|.++. ..+|.++|+.+++.+.
T Consensus 250 ~~~~~~~l~~~----~a~div~~d~~~~GGite----~~kia~~A~~~~~~v~ 294 (372)
T COG4948 250 TRWDFRRLLEA----GAVDIVQPDLARVGGITE----ALKIAALAEGFGVMVG 294 (372)
T ss_pred cHHHHHHHHHc----CCCCeecCCccccCCHHH----HHHHHHHHHHhCCcee
Confidence 45666666663 223334443344555666 7788888887777554
No 480
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.64 E-value=4e+02 Score=23.50 Aligned_cols=55 Identities=15% Similarity=0.139 Sum_probs=34.2
Q ss_pred CHHHHHHHHHcC--CCcEEEEEEc-ccC--CC-CCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENN--KGEIAAIILE-PVV--GN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~--~~~~~~vi~~-~~~--~~-~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
++++++.+++.. .+....++++ .+. ++ .-...+ +..|..+.++.+++||+|-.|+
T Consensus 134 t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~d----l~ai~~lk~~~~lPVivd~SHs 194 (250)
T PRK13397 134 TIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLD----IMAVPIIQQKTDLPIIVDVSHS 194 (250)
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccC----HHHHHHHHHHhCCCeEECCCCC
Confidence 566665555531 2344577777 432 21 111233 7888888888999999998886
No 481
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=28.61 E-value=1.2e+02 Score=27.81 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhCCEEEEeccccccccccCccccccCCCcchhhhhhhcc-CCcccccccccHHHHH
Q 015230 205 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 270 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li~De~~~g~~~g~~~~~~~~~~~~d~~~~sK~~~-~G~~~g~~~~~~~~~~ 270 (411)
.+++|.+.|++.|..+|+|-.-+ .+..++..++-+.+-+.+| .|+|+-+-...+++.+
T Consensus 50 ~~~ell~~Anklg~~vivDvnPs--------il~~l~~S~~~l~~f~e~G~~glRlD~gfS~eei~~ 108 (360)
T COG3589 50 RFKELLKEANKLGLRVIVDVNPS--------ILKELNISLDNLSRFQELGVDGLRLDYGFSGEEIAE 108 (360)
T ss_pred HHHHHHHHHHhcCcEEEEEcCHH--------HHhhcCCChHHHHHHHHhhhhheeecccCCHHHHHH
Confidence 38899999999999999994432 3456677778788888887 5899877655544433
No 482
>COG4294 Uve UV damage repair endonuclease [DNA replication, recombination, and repair]
Probab=28.57 E-value=2.7e+02 Score=25.20 Aligned_cols=50 Identities=10% Similarity=0.102 Sum_probs=32.9
Q ss_pred HHHHHHHHHcCCCcEEE-EEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 170 VSALENLFENNKGEIAA-IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~-vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
.+.+.+.+.+.++.++. +.+|... ..++ .+++..+|.+-++++|.|--|-
T Consensus 190 ~eqf~kni~~LP~~vksRl~LENDd-----~sYs---~eelL~lCek~~iPlVfD~HHh 240 (347)
T COG4294 190 LEQFIKNIQRLPDSVKSRLTLENDD-----KSYS---TEELLPLCEKLNIPLVFDAHHH 240 (347)
T ss_pred HHHHHHHHhhcCHHHHHhheeeccc-----cccc---HHHHHHHHHHhCCCEEEechhh
Confidence 55666666655554443 4444322 2222 7899999999999999997664
No 483
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=28.46 E-value=38 Score=30.62 Aligned_cols=22 Identities=23% Similarity=0.395 Sum_probs=19.6
Q ss_pred HHHHHHHHHH-hCCEEEEecccc
Q 015230 206 LNAIRRITKE-NGALLIFDEVMT 227 (411)
Q Consensus 206 l~~i~~l~~~-~~~~li~De~~~ 227 (411)
+++|.++|.+ .+..+|.||+|.
T Consensus 161 l~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 161 LDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred HHHHHHHHhcCCCceEEeccchh
Confidence 9999999954 688999999995
No 484
>PRK13601 putative L7Ae-like ribosomal protein; Provisional
Probab=28.37 E-value=1.7e+02 Score=20.73 Aligned_cols=46 Identities=9% Similarity=0.201 Sum_probs=30.4
Q ss_pred HHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEeccc
Q 015230 171 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 226 (411)
Q Consensus 171 ~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~ 226 (411)
+...+.+++ ++.++|++-..-+ ++..+.+.++|++++++++.....
T Consensus 14 ~~vlkaIk~--gkakLViiA~Da~--------~~~~k~i~~~c~~~~Vpv~~~~t~ 59 (82)
T PRK13601 14 KQTLKAITN--CNVLQVYIAKDAE--------EHVTKKIKELCEEKSIKIVYIDTM 59 (82)
T ss_pred HHHHHHHHc--CCeeEEEEeCCCC--------HHHHHHHHHHHHhCCCCEEEeCCH
Confidence 444566664 4666776644221 234999999999999999755444
No 485
>TIGR01766 tspaseT_teng_C transposase, IS605 OrfB family, central region. This model represents a region of a sequence similarity between a family of putative transposases of Thermoanaerobacter tengcongensis, smaller related proteins from Bacillus anthracis, putative transposes described by pfam model pfam01385, and other proteins.
Probab=27.99 E-value=78 Score=22.03 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhCCEEE-Eecccc
Q 015230 205 FLNAIRRITKENGALLI-FDEVMT 227 (411)
Q Consensus 205 ~l~~i~~l~~~~~~~li-~De~~~ 227 (411)
+.+.|.-.|.++|+.|+ +|+.|+
T Consensus 58 ~~~~l~yka~~~Gi~v~~v~~~yT 81 (82)
T TIGR01766 58 LISKIKYKAEEYGIEVIEVNPAYT 81 (82)
T ss_pred HHHHHHHHHHHcCCeEEEeCcccc
Confidence 36677778899999766 888775
No 486
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=27.62 E-value=68 Score=27.67 Aligned_cols=20 Identities=15% Similarity=0.217 Sum_probs=17.3
Q ss_pred HHHHHHHHHHhCCEEEEecc
Q 015230 206 LNAIRRITKENGALLIFDEV 225 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~ 225 (411)
.+++.++|+++|+.+|+++-
T Consensus 60 a~~l~~l~~~~gv~liINd~ 79 (221)
T PRK06512 60 AEKLVPVIQEAGAAALIAGD 79 (221)
T ss_pred HHHHHHHHHHhCCEEEEeCH
Confidence 67889999999999998763
No 487
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=27.45 E-value=54 Score=25.37 Aligned_cols=45 Identities=13% Similarity=0.128 Sum_probs=22.1
Q ss_pred CHHHHHHHHHc-CCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 169 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 169 d~~~l~~~~~~-~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
+.+.-.+.+++ ...++.++++.-.. .+ -+++.++|++++++|+.=
T Consensus 66 ~~~~r~~~l~~l~~~~~P~iIvt~~~------~~----p~~l~e~a~~~~ipll~t 111 (127)
T PF02603_consen 66 DEEERKERLEKLFSYNPPCIIVTRGL------EP----PPELIELAEKYNIPLLRT 111 (127)
T ss_dssp -HHHHCCHHHHHCTTT-S-EEEETTT-------------HHHHHHHHHCT--EEEE
T ss_pred CHHHHHHHHHHHhCCCCCEEEEECcC------CC----CHHHHHHHHHhCCcEEEc
Confidence 33433344443 12456666664433 34 568999999999988743
No 488
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=27.41 E-value=2e+02 Score=23.92 Aligned_cols=50 Identities=22% Similarity=0.331 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCCcEEEEEEcccCCC----CC-ccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 170 VSALENLFENNKGEIAAIILEPVVGN----SG-FIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 170 ~~~l~~~~~~~~~~~~~vi~~~~~~~----~G-~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
++.+-+.+++. ....++++|.... .. ....-.++-+.+.++|+++|+.++
T Consensus 96 l~~ii~~~~~~--~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 96 LRRYIAEARAK--GATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHC--CCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 44444444433 3456667664311 11 122345677899999999998774
No 489
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=27.34 E-value=5.1e+02 Score=24.07 Aligned_cols=22 Identities=9% Similarity=0.016 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCEEEEecccc
Q 015230 206 LNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 206 l~~i~~l~~~~~~~li~De~~~ 227 (411)
...+.++|+++|+.+|+..-..
T Consensus 149 ~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 149 FASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred HHHHHHHHHHhCCCEEEeCCCH
Confidence 6788899999999999876554
No 490
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=27.12 E-value=72 Score=26.33 Aligned_cols=48 Identities=23% Similarity=0.432 Sum_probs=32.9
Q ss_pred HHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHH---HHHHHHHHHHhCCEEEEecccc
Q 015230 172 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF---LNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 172 ~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~---l~~i~~l~~~~~~~li~De~~~ 227 (411)
-++.+.+ .+-++.+++.||+- .|..|| ++++.++|++.++.+|+++ |.
T Consensus 14 ~~~~L~~-~g~~vt~~fyNPNI------hP~~Ey~~R~~~~~~~~~~~~i~~i~~~-Y~ 64 (176)
T PF02677_consen 14 PLERLRE-EGFDVTGYFYNPNI------HPYEEYERRLEELKRFAEKLGIPLIEGD-YD 64 (176)
T ss_pred HHHHHHH-CCCCeEEEEeCCCC------CcHHHHHHHHHHHHHHHHHcCCCEEecC-CC
Confidence 3444333 34578899998854 444444 5567778999999999998 63
No 491
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=27.01 E-value=1.5e+02 Score=21.70 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=28.7
Q ss_pred HHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEe
Q 015230 171 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223 (411)
Q Consensus 171 ~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~D 223 (411)
....+.+++ ++..+|++-..- +++..+.+..+|++|+++++.-
T Consensus 22 ~~v~kai~~--gkaklViiA~D~--------~~~~~~~i~~~c~~~~Ip~~~~ 64 (99)
T PRK01018 22 KRTIKAIKL--GKAKLVIVASNC--------PKDIKEDIEYYAKLSGIPVYEY 64 (99)
T ss_pred HHHHHHHHc--CCceEEEEeCCC--------CHHHHHHHHHHHHHcCCCEEEE
Confidence 445566664 356666664322 2344899999999999998653
No 492
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=26.99 E-value=62 Score=28.76 Aligned_cols=50 Identities=18% Similarity=0.296 Sum_probs=29.1
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCH-HHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP-DFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~-~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
+++++++.+. ...++++++ |...... +.+..+.+.+++++.++|+|-+-.
T Consensus 44 ~~~e~~~~~~----~~~alvi~~-----G~l~~~~~~~i~~~~~~a~~~~~pvVlDpv~~ 94 (263)
T PRK09355 44 APEEAEEMAK----IAGALVINI-----GTLTEERIEAMLAAGKIANEAGKPVVLDPVGV 94 (263)
T ss_pred CHHHHHHHHH----hcCceEEeC-----CCCCHHHHHHHHHHHHHHHhcCCCEEECCccc
Confidence 5677777765 334555533 3332211 113344455788999999997654
No 493
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=26.66 E-value=1.1e+02 Score=28.55 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=30.3
Q ss_pred cEEEEEEcccCCCCCccCCC-------------HHHHHHHHHHHHHhCCEEEEecccc
Q 015230 183 EIAAIILEPVVGNSGFIAPK-------------PDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 183 ~~~~vi~~~~~~~~G~~~~~-------------~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
+-.+|+.||.+-.-.....+ .+.--+|+++|++||++++.|---+
T Consensus 262 ~AdvVItNPTH~AVAlkY~~~~~~AP~VvAKG~d~~AlkIreiA~e~~Ipi~enppLA 319 (363)
T COG1377 262 KADVVITNPTHYAVALKYDPEKMPAPVVVAKGVDLVALKIREIAKEHGIPIIENPPLA 319 (363)
T ss_pred CCCEEeeCcCceeeeeeeccccCCCCEEEEeCCcHHHHHHHHHHHHcCCceecChHHH
Confidence 34578888876442222211 1346789999999999999996543
No 494
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.41 E-value=2.9e+02 Score=26.01 Aligned_cols=63 Identities=22% Similarity=0.197 Sum_probs=38.5
Q ss_pred CcHHHHHHHHHHHHcCCCCCCCCHHH--HHHHHHHHhhCCCCCEEEEeCChHHHHHHHHHHHHhc
Q 015230 53 ADDQVLAALGETMKKGTSFGAPCLLE--NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 115 (411)
Q Consensus 53 ~~~~v~~a~~~~l~~~~~~~~~~~~~--~~l~~~l~~~~~~~~~v~~~~~g~~a~~~al~~~~~~ 115 (411)
.|-++.+|+...-++-..+.++..+. .++.--|.+.++-..+++++++|+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vLn~ll~~~skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIGSTEISFVLNELLKLESKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceecchhHHHHHHHHhccceEEEEeccccHHHHHHHHHHHHh
Confidence 56778888877766632232222221 1222223334433568999999999999988887655
No 495
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=26.28 E-value=48 Score=23.99 Aligned_cols=44 Identities=25% Similarity=0.234 Sum_probs=29.0
Q ss_pred HHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEE
Q 015230 172 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 221 (411)
Q Consensus 172 ~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li 221 (411)
++.+.+++ +++.+|+..|.........+ -..|++.|.+++++++
T Consensus 51 ~i~~~i~~--~~IdlVIn~~~~~~~~~~~d----g~~irr~a~~~~Ip~~ 94 (95)
T PF02142_consen 51 QIMDLIKN--GKIDLVINTPYPFSDQEHTD----GYKIRRAAVEYNIPLF 94 (95)
T ss_dssp HHHHHHHT--TSEEEEEEE--THHHHHTHH----HHHHHHHHHHTTSHEE
T ss_pred HHHHHHHc--CCeEEEEEeCCCCcccccCC----cHHHHHHHHHcCCCCc
Confidence 35566774 47888888876544322212 7789999999999875
No 496
>PRK14017 galactonate dehydratase; Provisional
Probab=26.17 E-value=5.6e+02 Score=24.17 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=30.3
Q ss_pred CHHHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEE
Q 015230 169 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222 (411)
Q Consensus 169 d~~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~ 222 (411)
+..++++.++.. ++=++++-....|.++. ..++.++|+++|+.+..
T Consensus 239 ~~~~~~~li~~~----a~d~v~~d~~~~GGit~----~~~ia~~A~~~gi~~~~ 284 (382)
T PRK14017 239 SRWDFKRVLEAG----GVDIIQPDLSHAGGITE----CRKIAAMAEAYDVALAP 284 (382)
T ss_pred CHHHHHHHHHcC----CCCeEecCccccCCHHH----HHHHHHHHHHcCCeEee
Confidence 567777777732 22234443444555666 88999999999987664
No 497
>PRK10785 maltodextrin glucosidase; Provisional
Probab=26.13 E-value=1.3e+02 Score=30.51 Aligned_cols=59 Identities=20% Similarity=0.304 Sum_probs=41.4
Q ss_pred CHHHHHHHHHcCC-CcEEEEEEcccCCCCCccCC-------------CHHHHHHHHHHHHHhCCEEEEecccc
Q 015230 169 DVSALENLFENNK-GEIAAIILEPVVGNSGFIAP-------------KPDFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 169 d~~~l~~~~~~~~-~~~~~vi~~~~~~~~G~~~~-------------~~~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
|++.+.+.|.... =.+.+|.++|++.+.+.--+ +.+-++++++-|+++|+-||.|-|..
T Consensus 177 Dl~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~N 249 (598)
T PRK10785 177 DLDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFN 249 (598)
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 7777766665421 25778999997755322111 22459999999999999999999874
No 498
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=26.06 E-value=2e+02 Score=24.63 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=24.9
Q ss_pred CCccCCCHHHHHHHHHHHHHhCCEEEEecccccc
Q 015230 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229 (411)
Q Consensus 196 ~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~ 229 (411)
+|.+..+. +++|.++|.+.|+.-|+=-+|+..
T Consensus 183 TGGIdl~N--f~~I~~i~ldaGv~kviPHIYssi 214 (236)
T TIGR03581 183 TGGIDLDN--FEEIVQIALDAGVEKVIPHVYSSI 214 (236)
T ss_pred CCCccHHh--HHHHHHHHHHcCCCeeccccceec
Confidence 45565433 999999999999999888888744
No 499
>TIGR00160 MGSA methylglyoxal synthase. Methylglyoxal synthase (MGS) generates methylglyoxal (MG), a toxic metabolite (that may also be a regulatory metabolite and) that is detoxified, prinicipally, through a pathway involving glutathione and glyoxylase I. Totemeyer, et al. (MUID:98149311) propose that, during a loss of control over carbon flux, with accumulation of phosphorylated sugars and depletion of phosphate, as might happen during a rapid shift to a richer medium, MGS aids the cell by converting some dihydroxyacetone phosphate (DHAP) to MG and phosphate. This is therefore an alternative to triosephosphate isomerase and the remainder of the glycolytic pathway for the disposal of DHAP during the stress of a sudden increase in available sugars.
Probab=25.97 E-value=2.9e+02 Score=21.97 Aligned_cols=54 Identities=13% Similarity=0.182 Sum_probs=36.4
Q ss_pred HHHHHHHHcCCCcEEEEEEcccCCCCCccCCCHHHHHHHHHHHHHhCCEEEEecccccc
Q 015230 171 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229 (411)
Q Consensus 171 ~~l~~~~~~~~~~~~~vi~~~~~~~~G~~~~~~~~l~~i~~l~~~~~~~li~De~~~g~ 229 (411)
+++-..+.+..=....|+.+|...... -++ ++.|.++|.-|++++-...+.+.+
T Consensus 63 qQIga~Ia~g~id~vIFf~DPl~~~ph-epD----i~aLlRlc~v~nIP~AtN~aTA~~ 116 (143)
T TIGR00160 63 QQIGALIAEGKIDAVIFFWDPLNAQPH-EPD----VKALLRLCTVWNIPLATNVATADF 116 (143)
T ss_pred HHHHHHHHhCCCCEEEEecCCCCCCCC-CcC----HHHHHHHHHhhCcccccCHHHHHH
Confidence 556666664322334455566554322 122 999999999999999999988766
No 500
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=25.87 E-value=46 Score=29.92 Aligned_cols=24 Identities=17% Similarity=0.268 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHhCCEEEEecccc
Q 015230 204 DFLNAIRRITKENGALLIFDEVMT 227 (411)
Q Consensus 204 ~~l~~i~~l~~~~~~~li~De~~~ 227 (411)
+.++++.+.|+++|+-||+|=|.-
T Consensus 52 ~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 52 EDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETS
T ss_pred hhhhhhhhccccccceEEEeeecc
Confidence 449999999999999999999874
Done!