RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015230
(411 letters)
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 868 bits (2244), Expect = 0.0
Identities = 353/411 (85%), Positives = 384/411 (93%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 60
MPGGVNSPVRAFKSVGGQPIVFD VKGS+ WD+DGNEYIDYVGSWGPAIIGHADD+VLAA
Sbjct: 64 MPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAA 123
Query: 61 LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 120
L ETMKKGTSFGAPCLLENVLAEMVI AVPS+EMVRFVNSGTEACMGVLRLARA+TGRE+
Sbjct: 124 LAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREK 183
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180
IIKFEGCYHGHAD FLVKAGSGVATLGLPDSPGVPK AT TLTAP+ND+ A++ LFE N
Sbjct: 184 IIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEAN 243
Query: 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240
KGEIAA+ILEPVVGNSGFI PK +FL +R ITKENGALL+FDEVMTGFR+AYGGAQEYF
Sbjct: 244 KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYF 303
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 300
G+TPDLTTLGK+IGGGLPVGAYGGRR+IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR
Sbjct: 304 GITPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 363
Query: 301 LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 360
L++PGTYEYL+KIT +L QGI++AGKKAGH +CGGYISGMFGFFFTEGPVYNF DAKKS+
Sbjct: 364 LQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSD 423
Query: 361 TTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411
T KFARF+RGMLEEGVY APSQFEAGFTSLAH+ +DI TI AAE+VL +I
Sbjct: 424 TAKFARFHRGMLEEGVYLAPSQFEAGFTSLAHTEEDIDFTIAAAERVLARI 474
>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 776 bits (2006), Expect = 0.0
Identities = 269/411 (65%), Positives = 320/411 (77%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 60
+PGGVNSPVRAFKSVGG P + KG++++D+DGNEYIDYVGSWGP I+GHA +V+ A
Sbjct: 15 IPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEA 74
Query: 61 LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 120
+ E +KG SFGAP LE LAE+VI VPSIEMVR VNSGTEA M +RLAR +TGR++
Sbjct: 75 VIEAAEKGLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDK 134
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180
IIKFEGCYHGHAD LVKAGSG ATLGLPDSPGVP+ TLTAP+ND+ A+E LFE
Sbjct: 135 IIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEY 194
Query: 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240
EIAA+I+EPV GN G + PKP FL +R + E+GALLIFDEVMTGFR+A GGAQ Y+
Sbjct: 195 GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYY 254
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 300
GVTPDLTTLGKIIGGGLPVGA+GGRR+IME +AP GP+YQAGTLSGNPLAM AG+ TLK
Sbjct: 255 GVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKL 314
Query: 301 LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 360
LKEPG YE L +T L +G+ +A KKAG + + MFG FFT+ PV N+ DAKKS+
Sbjct: 315 LKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSD 374
Query: 361 TTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411
T +FARF+ ML+EGVY APSQFEAGF S AH+ +DI+ T+ AA K +
Sbjct: 375 TERFARFFHAMLDEGVYLAPSQFEAGFVSAAHTDEDIEKTLEAARKAFAAL 425
>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme
metabolism].
Length = 432
Score = 630 bits (1628), Expect = 0.0
Identities = 243/412 (58%), Positives = 306/412 (74%), Gaps = 1/412 (0%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 60
+PGGVNSPVRAFKSVGG PI + KG+++ D+DGNEYIDYV WGP I+GHA V+ A
Sbjct: 18 IPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEA 77
Query: 61 LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 120
+ E +++G SFGAP LE LAE++I VPSIE VRFVNSGTEA M +RLARA+TGR++
Sbjct: 78 VQEQLERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDK 137
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180
IIKFEGCYHGH+D LVKAGSG ATLG P SPGVP TL P+ND+ ALE FE
Sbjct: 138 IIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEY 197
Query: 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240
+IAA+I+EPV GN G + P+P FL +R +T+E+GALLIFDEV+TGFR+A GGAQ Y+
Sbjct: 198 GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYY 257
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 300
GV PDLTTLGKIIGGGLP+GA+GGR +IME +AP GP+YQAGTLSGNPLAM AG+ TL+
Sbjct: 258 GVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEE 317
Query: 301 LKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 359
L G YE L+ + L +G+ A ++ G + + MFG FFTE V N+ DAK+S
Sbjct: 318 LMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRS 377
Query: 360 ETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411
+ +FA+F+ +L GVY APSQFEAGF S AH+ +DI T+ AA++ +++
Sbjct: 378 DVERFAKFFHHLLNRGVYLAPSQFEAGFLSTAHTEEDIDRTLEAADEAFKEL 429
>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases [Biosynthesis of cofactors, prosthetic
groups, and carriers, Heme, porphyrin, and cobalamin].
Length = 423
Score = 598 bits (1544), Expect = 0.0
Identities = 248/411 (60%), Positives = 309/411 (75%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 60
PGGVNSPVRAFKSVG P KG++++D+DGNEYIDYV SWGP I+GHA +V+ A
Sbjct: 13 FPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEA 72
Query: 61 LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 120
+ E +++GTS+GAP E +LA+ +IS VPS+EMVRFVNSGTEA M +RLAR +TGR++
Sbjct: 73 VKEALERGTSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDK 132
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 180
IIKFEGCYHGH D LVKAGSG ATLGLP SPGVP+ TL P+ND+ ALE +FE
Sbjct: 133 IIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY 192
Query: 181 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF 240
EIA +I+EPV GN G + PKP+FL +R +T+E G+LLIFDEVMTGFR+A GGAQEYF
Sbjct: 193 GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYF 252
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 300
GV PDLTTLGKIIGGGLPVGA+GGRR+IME +AP GP+YQAGTLSGNPLAM AG+ TLK
Sbjct: 253 GVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKL 312
Query: 301 LKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSE 360
L E G Y L+++ L +G+ + + G + MF FFTE V N+ DAKKS+
Sbjct: 313 LDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSD 372
Query: 361 TTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411
T FA+F+ ML++GV+ PSQFEA F S AH+ +DI++TI AAE+V ++
Sbjct: 373 TELFAKFFHEMLDKGVFLPPSQFEACFLSAAHTEEDIENTIEAAEEVFAEL 423
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 522 bits (1346), Expect = 0.0
Identities = 207/410 (50%), Positives = 288/410 (70%), Gaps = 1/410 (0%)
Query: 3 GGVNSPVRAFKSVGG-QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAAL 61
GGVNSP R++K+VGG P+V + KG++ +D+DGN+YIDY+ ++GP I GHA + A+
Sbjct: 19 GGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAI 78
Query: 62 GETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 121
E + G +G P LE A+M+ A+PS+E VRFVNSGTEA M +R+ARA+TGR +I
Sbjct: 79 TEAAENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKI 138
Query: 122 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 181
IKF GCYHGH+D LV AGSG +TLG PDS GVPK E +T PFND+ AL+ +
Sbjct: 139 IKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWG 198
Query: 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFG 241
E+AA+++EP+VGN G + PKP FL A+ + E GAL+I+DEV+T FR YGGAQ+ G
Sbjct: 199 DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLG 258
Query: 242 VTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 301
V PDLT LGKIIGGGLP+GAYGGR+DIME VAP GP YQAGT++GNP +M AGI L+ L
Sbjct: 259 VEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVL 318
Query: 302 KEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSET 361
++ G YE L+++ L +GI++A +K G I + G +FT+ V N++ A++S+
Sbjct: 319 QQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDG 378
Query: 362 TKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLRQI 411
F +F++ ML +G+ APS++EA F + AH+ +DI+ T+ A ++ Q+
Sbjct: 379 EAFGKFFKLMLNQGINLAPSKYEAWFLTTAHTEEDIEETLEAVDRAFAQL 428
>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family. This
family belongs to pyridoxal phosphate (PLP)-dependent
aspartate aminotransferase superfamily (fold I). The
major groups in this CD correspond to ornithine
aminotransferase, acetylornithine aminotransferase,
alanine-glyoxylate aminotransferase, dialkylglycine
decarboxylase, 4-aminobutyrate aminotransferase,
beta-alanine-pyruvate aminotransferase,
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase, and glutamate-1-semialdehyde
2,1-aminomutase. All the enzymes belonging to this
family act on basic amino acids and their derivatives
are involved in transamination or decarboxylation.
Length = 413
Score = 364 bits (938), Expect = e-124
Identities = 142/406 (34%), Positives = 206/406 (50%), Gaps = 17/406 (4%)
Query: 14 SVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA 73
+V P+V +G++++D+DGN Y+D++ G +GH +V+ AL E + K T F
Sbjct: 14 TVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73
Query: 74 P---CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129
LAE++++ P ++ V FVNSGTEA L+LARA+TGR++II FEG YH
Sbjct: 74 GFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYH 133
Query: 130 GHADPFLVKAGSGVATLG----LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185
G L GS G LP VP Y +D+ ALE E + E+A
Sbjct: 134 GRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVA 193
Query: 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 244
A+I+EP+ G G I P P +L A+R + +++G LLI DEV TGF R A E+FGV P
Sbjct: 194 AVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEP 253
Query: 245 DLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 304
D+ TLGK +GGGLP+GA GR +IM+ PAGP GT GNPLA A + L+ L+E
Sbjct: 254 DIVTLGKGLGGGLPLGAVLGREEIMD-AFPAGPGLHGGTFGGNPLACAAALAVLEVLEEE 312
Query: 305 GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 364
G E ++ L + + + +K M G + K +
Sbjct: 313 GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRA-----TKPPDKELA 367
Query: 365 ARFYRGMLEEGVYFAPS--QFEAGFTSLAHSSDDIQHTITAAEKVL 408
A+ + LE G+ PS L + ++I + A ++ L
Sbjct: 368 AKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413
>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 327 bits (840), Expect = e-109
Identities = 160/402 (39%), Positives = 221/402 (54%), Gaps = 5/402 (1%)
Query: 2 PGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAAL 61
PGGVNSPVRA +SVG P + S G D G +ID+ GSWG I GH+ ++ A+
Sbjct: 19 PGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAI 78
Query: 62 GETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRER 120
+ ++GTS+G E + AE + S + +RFV+SGTEA M +RLAR TGR
Sbjct: 79 QQGAERGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSI 138
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYE--TLTAPFNDVSALENLFE 178
IIKF GCYHGHAD L G + L + TL+ P+ND + +
Sbjct: 139 IIKFLGCYHGHADTLL--QGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMN 196
Query: 179 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQE 238
+ +A +I EP+ N G + PKP F+ I + + G+L I DEV+TGFR+A GGA
Sbjct: 197 SLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVAQGGAAA 256
Query: 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 298
+ V PD+T GKI+GGGLP A + IM+ +AP G ++QAGTLSGNPLAM AG ++
Sbjct: 257 IYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASI 316
Query: 299 KRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 358
+E G Y L+ + I + + G + MF FFF E N +A+
Sbjct: 317 NLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQL 376
Query: 359 SETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 400
S+ F FY+ +GVY +PS FEA F S AHS +++ +
Sbjct: 377 SDIEAFQTFYQSAFSKGVYLSPSPFEASFLSSAHSMENLDYA 418
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 228 bits (583), Expect = 1e-70
Identities = 124/396 (31%), Positives = 193/396 (48%), Gaps = 41/396 (10%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMV 85
G+H+WD+DGNEYI+Y +GHA V+ A+ E ++ G +F P +E AE
Sbjct: 38 SGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNFTRPSAIELDAAESF 97
Query: 86 ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 145
+ + +MV+F +G++A +RLARA+TGR+ + + C PF + T
Sbjct: 98 LELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVAR---CAD---HPFFSTDDWFIGT 151
Query: 146 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 205
P S G+P + T+T +ND+++LE LFE++ G IA +ILEP + P+ F
Sbjct: 152 T--PMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATADE----PQDGF 205
Query: 206 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGR 265
L+ +RR+ ENGAL I DE++TGFR GAQ+ +G+ PDL+ GK +G G V A G+
Sbjct: 206 LHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGK 265
Query: 266 RDIMEMVAPAGPMYQAG---------TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 316
R+ ME+ G + T A+ A I T+ ++ E L++ +
Sbjct: 266 REYMEL----GGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAK 321
Query: 317 LTQGIIDAGKKAG---HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 373
L G+ +A + G H G + + T + + S+ + F + +
Sbjct: 322 LAAGVNEAAAEHGLQDHVRVSGRPCCL--TYSTLDG-----NGQPSQAFR-TLFLQETIR 373
Query: 374 EGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVLR 409
GV PS S AH DI+ TI A L
Sbjct: 374 RGV-LMPSL----VVSYAHGDADIERTIDAVHGALG 404
>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III.
Length = 338
Score = 220 bits (563), Expect = 7e-69
Identities = 102/318 (32%), Positives = 148/318 (46%), Gaps = 34/318 (10%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLA 82
KG ++D+DG Y+D++ +GH +++ A+ E K T LA
Sbjct: 6 KGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAFTTEPALQLA 65
Query: 83 EMVISAVP-SIEMVRFVNSGTEACMGVLRLARA------FTGRERIIKFEGCYHGHADPF 135
E + P ++ V F+NSG+EA ++LAR TG+ +II F G +HG
Sbjct: 66 EKLAQLTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGA 125
Query: 136 L-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-----------LFENNKGE 183
L V SG P PGV P+ D+ A E + +
Sbjct: 126 LSVTGSSGYKKGFGPSLPGVYF--------LPYPDLEAAEEELACADEALRLIKAVHDDN 177
Query: 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 242
IAA+I+EP+ G G + P P FL +R I K++G LLI DEV TGF R A E++GV
Sbjct: 178 IAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLFACEHYGV 237
Query: 243 TPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 302
TPD+ TL K + GGLP+ A +IM+ P GT GNPLA A + L ++
Sbjct: 238 TPDIMTLAKALTGGLPLSAVLATAEIMQAFHPGS---HGGTFGGNPLACAAALAVLDIIE 294
Query: 303 EPGTYEYLNKITGELTQG 320
+ + + L +G
Sbjct: 295 DENLLQNAQEKGDYLRKG 312
>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino
acid transport and metabolism].
Length = 404
Score = 209 bits (534), Expect = 1e-63
Identities = 106/319 (33%), Positives = 150/319 (47%), Gaps = 27/319 (8%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK----GTSFGAP 74
P+V +G+++WD G EY+D+ +GH ++ AL E +K F
Sbjct: 25 PVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNE 84
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGH 131
E LAE ++ P + V F NSG EA L+LAR +TG + +II FE +HG
Sbjct: 85 PQAE--LAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGR 142
Query: 132 ADPFLVKAGSG--VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 189
+ A P PG PFND+ ALE + + AA+I+
Sbjct: 143 T-LGALSATGQPKYRKGFGPLLPGF--------RHVPFNDIEALEAAID---EDTAAVIV 190
Query: 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 248
EP+ G G I P+FL A+R + E+GALLI DEV TG R A E++GV PD+ T
Sbjct: 191 EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT 250
Query: 249 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308
L K +GGG P+GA +I P T GNPLA + L+ L E G E
Sbjct: 251 LAKALGGGFPIGAMLATEEIASAFTPGD---HGSTFGGNPLACAVALAVLEVLLEEGLLE 307
Query: 309 YLNKITGELTQGIIDAGKK 327
+ + L Q + + ++
Sbjct: 308 NVREKGEYLLQRLRELKRR 326
>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related
aminotransferases [Amino acid transport and metabolism].
Length = 447
Score = 202 bits (516), Expect = 1e-60
Identities = 104/315 (33%), Positives = 154/315 (48%), Gaps = 34/315 (10%)
Query: 14 SVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---- 69
P+V +G++++D+DGNEY+D++ +GH +V+ A+ + K
Sbjct: 34 GRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT 93
Query: 70 --SFGAPCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFE 125
+ P + LAE + + P V F NSG EA +++ARA+TGR +I F+
Sbjct: 94 RDLYYEPYVE---LAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFD 150
Query: 126 GCYHGH--------ADPFLVKAGSG-----VATLGLPDSPGVPKGATYETLTAPFNDVSA 172
G +HG KAG G V + P+ P G E +
Sbjct: 151 GAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA--LEY 208
Query: 173 LENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229
+E + + E+AAII+EP+ G G I P FL A+R++ +E+G LLI DEV TGF
Sbjct: 209 IERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGF 268
Query: 230 -RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 288
R A E+FGV PD+ TL K +GGGLP+ A GR +IM+ GT GNP
Sbjct: 269 GRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMDWPPGG----HGGTFGGNP 324
Query: 289 LAMTAGIHTLKRLKE 303
+A A + L ++E
Sbjct: 325 VACAAALAVLDVIEE 339
>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine
family. This family of proteins, for which ornithine
aminotransferases form an outgroup, consists mostly of
proteins designated acetylornithine aminotransferase.
However, the two very closely related members from E.
coli are assigned different enzymatic activities. One is
acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an
enzyme of arginine biosynthesis, while another is
succinylornithine aminotransferase, an enzyme of the
arginine succinyltransferase pathway, an
ammonia-generating pathway of arginine catabolism (See
MEDLINE:98361920). Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 179 bits (457), Expect = 1e-52
Identities = 104/332 (31%), Positives = 162/332 (48%), Gaps = 38/332 (11%)
Query: 12 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---- 67
+ G P+ KG++++D++G EY+D+V +GHA +++ AL E ++K
Sbjct: 3 MNTYGRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHV 62
Query: 68 GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG-----RERII 122
+ E LAE + + V F NSG EA L+LAR +TG +++II
Sbjct: 63 SNLYYTEPQEE--LAEK-LVEHSGADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKII 119
Query: 123 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATY-ETLT-----APFNDVSALENL 176
FE +HG T+G + G PK E L AP+ND+ +L+
Sbjct: 120 AFENSFHGR-------------TMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKA 166
Query: 177 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 235
+ E AA+I+EP+ G G +FL A+R I K+ ALLIFDEV TG R
Sbjct: 167 ID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFF 223
Query: 236 AQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 295
A E++G+ PD+ TL K +GGG+P+GA + ++ E P T GNPLA A +
Sbjct: 224 AYEHYGIEPDIITLAKGLGGGVPIGATLAKEEVAEAFTPGD---HGSTFGGNPLACAAAL 280
Query: 296 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327
L+ +++ E + + + + + GK
Sbjct: 281 AVLEVIEKERLLENVKEKGDYFKERLEELGKN 312
>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 172 bits (439), Expect = 9e-50
Identities = 94/305 (30%), Positives = 146/305 (47%), Gaps = 44/305 (14%)
Query: 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGA 73
PI F +G+ +WD DG EY+D++ +GH +++ A+ E K TS +
Sbjct: 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYI 80
Query: 74 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIK-----FEGCY 128
E LAE + + ++ V F NSG EA ++LAR + ++ I K E +
Sbjct: 81 EPQEE--LAEK-LVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSF 137
Query: 129 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETL-----TAPFNDVSALENLFENNKGE 183
HG +ATL P +G +E L PFND+ AL+ +
Sbjct: 138 HGRT----------LATLSATGQPKYQEG--FEPLVEGFIYVPFNDIEALKAAITDK--- 182
Query: 184 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-----RLAYGGAQE 238
AA++LEP+ G G ++L A+R + ENG LLI DEV TG AY +
Sbjct: 183 TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAY----Q 238
Query: 239 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL 298
++G+ PD+ TL K +GGG+P+GA + + ++ P T GNPLA A + +
Sbjct: 239 HYGIEPDIMTLAKGLGGGVPIGAVLAKEKVADVFTPGD---HGSTFGGNPLACAAALAVI 295
Query: 299 KRLKE 303
+ ++E
Sbjct: 296 EIIEE 300
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 170 bits (434), Expect = 8e-49
Identities = 103/316 (32%), Positives = 146/316 (46%), Gaps = 49/316 (15%)
Query: 20 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTSFGA---P 74
+ +G + + +DG EY+D+ A +GH +V+ A+ E K G
Sbjct: 27 LPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYE 86
Query: 75 CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 133
+L+ LAE + P ++ F NSG EA G L+LA+ T R II F GC+HG
Sbjct: 87 SILK--LAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRT- 143
Query: 134 PFLVKAGSGVATLGL------------PDSPGV-----------PKGATYETLTAPFNDV 170
+ L + P V PKG E +
Sbjct: 144 ---------LGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFL--ECL 192
Query: 171 SALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228
LE+LF++ E+AA+I+EPV+G G+I P FL +R I +G LLIFDEV TG
Sbjct: 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTG 252
Query: 229 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 287
F R A + FGV PD+ T+ K I GLP+ A +++ME P G T GN
Sbjct: 253 FGRTGEWFAAQTFGVVPDIMTIAKGIASGLPLSAVVASKELMEQ-WPLGS--HGTTFGGN 309
Query: 288 PLAMTAGIHTLKRLKE 303
P+A A + TL+ +KE
Sbjct: 310 PVACAAALATLEVIKE 325
>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 169 bits (431), Expect = 4e-48
Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 23/315 (7%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDY-VGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLL 77
P+ +G+ D+DG+ Y D+ +G G A+ GH+ V AL E ++G + P
Sbjct: 58 PLFVAEARGARFTDVDGHRYDDFCLGDTG-AMFGHSPAPVARALAEQARRGLTTMLPSED 116
Query: 78 ENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV 137
+ E ++ + + + T+A VLR ARA TGR +I+ F GCYHG D V
Sbjct: 117 AAWVGEE-LARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFV 175
Query: 138 KAGSGVAT-----LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 192
G LG AT T FND++ALE G++AA++ EP
Sbjct: 176 DLVDGRPVQRPGLLG----QVHDLTAT--TRVVEFNDLAALEAALA--DGDVAAVLAEPA 227
Query: 193 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKI 252
+ N G + P+P F A+R +T+ G LL+ DE T GG G+ PD +GK
Sbjct: 228 MTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEPDFLVVGKP 286
Query: 253 IGGGLPVGAYGGRRDI---MEMVAPAGPMYQAG---TLSGNPLAMTAGIHTLKRLKEPGT 306
I GG+P YG ++ + + P +G TLS N LAM A TL +
Sbjct: 287 IAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAA 346
Query: 307 YEYLNKITGELTQGI 321
Y ++ + L G+
Sbjct: 347 YAHMLALAARLAAGL 361
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 164 bits (417), Expect = 3e-46
Identities = 99/309 (32%), Positives = 153/309 (49%), Gaps = 30/309 (9%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG------ 72
P+V + + +WDI+GNEYID++ +GH + +V+ A+ E K +
Sbjct: 24 PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFP 83
Query: 73 -APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 131
P LL L E+ P V F SG++A G ++ ARA+T R +I+ + Y+G
Sbjct: 84 VEPLLLAEKLIEIAPGDNPK---VSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGS 140
Query: 132 --------ADPFLVKAG----SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179
F V+A S V + PD P G + V ++ FE
Sbjct: 141 TYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKM--ECVEYIKEKFEG 198
Query: 180 N--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236
+AA+ EP+ G++G I P D+ +++I E+G LL+ DEV +G R A
Sbjct: 199 EVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFA 258
Query: 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 296
E+FGV PD+ TLGK +GGGLP+ A GR +IM+ + P + TLSGNP+A A +
Sbjct: 259 IEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLPPLAHAF---TLSGNPVASAAALA 315
Query: 297 TLKRLKEPG 305
++ ++E
Sbjct: 316 VIEEIEEKN 324
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 162 bits (411), Expect = 7e-46
Identities = 104/300 (34%), Positives = 149/300 (49%), Gaps = 23/300 (7%)
Query: 12 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GT 69
F + G PI KG+ + D +G Y+D+ +GH V A+ E +
Sbjct: 5 FPTYGRFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHV 64
Query: 70 SFGAPCLLENVLAEMV---ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 126
S L N L E V ++ + ++V F NSG EA L+LAR TG+ +I+ FE
Sbjct: 65 S----NLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQ 120
Query: 127 CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186
+HG F + +G + P +P G T+ PFND+ AL+ + E+AA
Sbjct: 121 SFHGRT--FGTMSATGQEKIKEGFGPLLP-GFTH----VPFNDIKALKEVMN---EEVAA 170
Query: 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245
++LE V G G I P FL ++ + K+ GALLI DEV TG R A E FG+ PD
Sbjct: 171 VMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPD 230
Query: 246 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 305
+ T+ K +G G+PVGA G++ E+ GP T GNPLAM A L+ +K+P
Sbjct: 231 IVTVAKGLGNGIPVGAMIGKK---ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPS 287
>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 163 bits (414), Expect = 8e-46
Identities = 106/316 (33%), Positives = 152/316 (48%), Gaps = 43/316 (13%)
Query: 18 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK-----GTSFG 72
P+V + +G + D+DGN Y+D+ +GHA +V+ A+ E +K T F
Sbjct: 36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSLTDFY 95
Query: 73 APCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130
+E LAE ++ P V F NSGTE+ +++AR TGR+ II F G +HG
Sbjct: 96 YEPAVE--LAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHG 153
Query: 131 -----------------HADPFLVKAGSGVATLGLPDSPGVP-KGATYETLTAPFNDVSA 172
P + GV + P+ P E N V
Sbjct: 154 RTYGSLSLTASKPVQRKGFFPLM----PGVIHVPYPNPYRNPWGIENPEECG---NAVLD 206
Query: 173 L--ENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228
+ LF+ E+AAII+EP+ G G++ P +F +R++ + G LLI DEV TG
Sbjct: 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTG 266
Query: 229 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 287
R A E+FGV PD+ TL K I GGLP+GA GR ++M + P G A T GN
Sbjct: 267 MGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFL--PPGS--HANTFGGN 322
Query: 288 PLAMTAGIHTLKRLKE 303
P+A A + TL+ L+E
Sbjct: 323 PVAAAAALATLEELEE 338
>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 156 bits (397), Expect = 1e-43
Identities = 97/331 (29%), Positives = 148/331 (44%), Gaps = 45/331 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 74
P+V KG +WD++G +Y D++ ++ GH ++LAAL +K T +F
Sbjct: 14 PVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYND 73
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEG 126
L LAE I+ + + V +NSG EA L+ AR + + +II G
Sbjct: 74 VL---GLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNG 130
Query: 127 CYHGHADPFLVKAGSGVATLGLPDSPGV-----PKGATYETLTAPFNDVSALENLFENNK 181
+ G + P P +E +NDV ALE L ++
Sbjct: 131 NFSGRT----------IGACSASTDPKCYNNFGPFVPGFEL--VDYNDVEALEKLLQDPN 178
Query: 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG---AQE 238
+AA I+EP+ G +G I P +L + + K+ LLI DE+ TG L G A +
Sbjct: 179 --VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTG--LGRTGKLLAHD 234
Query: 239 YFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPLAMTAGIH 296
+ GV PD+ LGK + GGL P+ A D+M ++ P + G T GNPLA +
Sbjct: 235 HEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG----EHGSTYGGNPLACAVAVE 290
Query: 297 TLKRLKEPGTYEYLNKITGELTQGIIDAGKK 327
L+ LKE E ++ G+ + KK
Sbjct: 291 ALEVLKEEKLAENAQRLGEVFRDGLKELLKK 321
>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 153 bits (389), Expect = 2e-42
Identities = 108/325 (33%), Positives = 151/325 (46%), Gaps = 45/325 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGAP 74
P+ +G+ +WD+DG EY+D +G +GHA V+ A+ + S F
Sbjct: 26 PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATE 85
Query: 75 CLLENVLAEMVIS--AVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA 132
+ LAE ++ P V F NSG EA +LAR TGR +I+ EG +HG
Sbjct: 86 PQIA--LAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRT 142
Query: 133 DPFLVKAGSGVATLGLPDSPGVPKGATYETLTA-----PFNDVSALENLFENNKGEIAAI 187
G+ T G P K A +E L P+ DV AL + + AA+
Sbjct: 143 ------MGALALT-GQPA-----KRAPFEPLPGGVEHVPYGDVDALAAAVD---DDTAAV 187
Query: 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246
LEP+ G +G + P +L A R IT +GALL+ DEV TG R A ++ GVTPD+
Sbjct: 188 FLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDV 247
Query: 247 TTLGKIIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAG----TLSGNPLAMTAGIHTLKR 300
TL K +GGGLP+GA +A PA + G T GNP+A A + L
Sbjct: 248 VTLAKGLGGGLPIGA---------CLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDT 298
Query: 301 LKEPGTYEYLNKITGELTQGIIDAG 325
+ G E ++ +L GI G
Sbjct: 299 IASEGLLENAERLGEQLRAGIEALG 323
>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 149 bits (379), Expect = 6e-41
Identities = 105/335 (31%), Positives = 154/335 (45%), Gaps = 55/335 (16%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
PI D + +WD++G EY+D+ G GH +V+AA+ +KK C
Sbjct: 24 PIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK---LSHTCF-- 78
Query: 79 NVLAEMVISAVPSIEMVRFVN---------------SGTEACMGVLRLARAFTGRERIIK 123
V++ P +E+ +N +G+EA +++ARA T R +I
Sbjct: 79 -----QVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIA 133
Query: 124 FEGCYHGHADPFLVKAGSGVATLGL-----PDSPGV---PKGATYETLTAPFNDVS---- 171
F G YHG TL L P S G+ P P + VS
Sbjct: 134 FTGAYHGRT----------HYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDA 183
Query: 172 --ALENLFENNK--GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
++E +F+N+ +IAAII+EPV G GF A P F+ +R + E+G +LI DEV T
Sbjct: 184 IASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT 243
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 286
G R A E GV DLTT K I GG P+ GR ++M+ +AP G GT +G
Sbjct: 244 GAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPGG---LGGTYAG 300
Query: 287 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321
NP+A A + LK ++ + N + +L G+
Sbjct: 301 NPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335
>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 149 bits (379), Expect = 6e-41
Identities = 109/333 (32%), Positives = 160/333 (48%), Gaps = 42/333 (12%)
Query: 13 KSVGGQPIVF-DSVKGSHMWDIDGNEYIDYVGSWGPAII--GHADDQVLAALGETMKKGT 69
+ VG ++ D + + +WD +G YID+ G A++ GH +V+AA+ + + T
Sbjct: 16 RGVGMTTQIYADRAENAEIWDKEGRRYIDFAA--GIAVVNTGHRHPRVIAAVKAQLDRFT 73
Query: 70 SFGAPCL-LEN--VLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 124
+ EN LAE + + VP + FV +G EA +++ARA TGR +I F
Sbjct: 74 HTCHQVVPYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAF 133
Query: 125 EGCYHGHADPFL----------VKAGSGVATLGLPDSPGVP-----KGATYETLTAPFND 169
G +HG F+ K G G +PD VP G + E
Sbjct: 134 GGGFHGRT--FMGMSLTGKVVPYKVGFGAM---MPDVYHVPFPVELHGVSVE------QS 182
Query: 170 VSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
++AL+ LF+ + +AAII+EPV G GF F+ A+R + ++G LLI DEV T
Sbjct: 183 LAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT 242
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 286
GF R A E+ V DLTT+ K + GG P+ A GR +IM+ P G GT G
Sbjct: 243 GFARTGKLFAMEHHEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPGG---LGGTYGG 299
Query: 287 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 319
NPL + A L ++E E N++ L Q
Sbjct: 300 NPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 148 bits (376), Expect = 7e-41
Identities = 98/296 (33%), Positives = 149/296 (50%), Gaps = 25/296 (8%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
IVF KGS ++D +G Y+D++ W +GH + ++ AL +K + +P
Sbjct: 19 DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLIN-PSPAFYN 77
Query: 79 NVLAEM--VISAVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGH 131
+A++ +++ + V F NSG EA G ++LAR + G II F+ +HG
Sbjct: 78 EPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGR 137
Query: 132 ADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 190
+ +G G T+ P PG PK A ND++++E L + + A++LE
Sbjct: 138 TLATMSASGKPGWDTIFAPQVPGFPK--------AELNDIASVEKLITD---KTVAVMLE 186
Query: 191 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 249
PV G G I +F+ +R +TK++G LLI DEV TG R A E G+ PD+ TL
Sbjct: 187 PVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTL 246
Query: 250 GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 305
GK IGGG+P+ A + VA Q GT +GNPL G+ + +L PG
Sbjct: 247 GKGIGGGVPLAALLAK----AEVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLAPG 298
>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase [Coenzyme metabolism].
Length = 449
Score = 149 bits (378), Expect = 1e-40
Identities = 90/328 (27%), Positives = 127/328 (38%), Gaps = 54/328 (16%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK------GTSFG 72
P V +G ++ DIDG Y+D + GH ++ A+ + + K G
Sbjct: 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTH 86
Query: 73 APCLLENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRLARAF------TGRERIIKF 124
P + LAE + P + V F +SG+EA L++A + R++ I
Sbjct: 87 EPAIE---LAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISR 143
Query: 125 EGCYHGHADPFLVKAGSGVATLGLPDSPG---------------------VPKGATYETL 163
YHG + + + +G E
Sbjct: 144 RNGYHG----------DTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGD 193
Query: 164 TAPFNDVSALENLFE-NNKGEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLI 221
LE L + IAA I+EPVVG G + P P +L +R I + G LLI
Sbjct: 194 EEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLI 253
Query: 222 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIME--MVAPAGP 277
DEV TGF R A E+ G+ PD+ L K + GG LP+ A I E AG
Sbjct: 254 ADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGA 313
Query: 278 MYQAGTLSGNPLAMTAGIHTLKRLKEPG 305
T SGNPLA A + L L+E
Sbjct: 314 FMHGHTYSGNPLACAAALANLDILEEED 341
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 146 bits (370), Expect = 2e-39
Identities = 86/315 (27%), Positives = 142/315 (45%), Gaps = 44/315 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
P+V D G+ + D+DG YID + S +GHA +V+ A+ K + P +
Sbjct: 25 PLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHY-TPAYMY 83
Query: 79 NV----LAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-- 130
+ LA+ + P + V F SG++A G+++ ARA+TGR II F YHG
Sbjct: 84 HEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGST 143
Query: 131 ---------------HADPFLVKAGSGVATLGLPDS----PGVPKGATYETLTAPFNDVS 171
P L G + PD P E AP +
Sbjct: 144 YGSLSMSGISLNMRRKYGPLL----PGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKE-- 197
Query: 172 ALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229
+FE E+A I++E + G+ G + P P + A+ + +E+G L D++ G
Sbjct: 198 ----MFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL 253
Query: 230 -RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNP 288
R + +F +TPDL + GK + GG+P+ A GR++IME + ++ T NP
Sbjct: 254 GRTGKWSSISHFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLF---TTGANP 310
Query: 289 LAMTAGIHTLKRLKE 303
++ A + T+ +++
Sbjct: 311 VSCAAALATIDMIED 325
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 144 bits (366), Expect = 3e-39
Identities = 105/297 (35%), Positives = 159/297 (53%), Gaps = 23/297 (7%)
Query: 23 DSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLEN 79
+ + + +WD++G EYID+ GH +V+AA+ + + + T P
Sbjct: 27 ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYV 86
Query: 80 VLAEMVISAVPSIE---MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 136
LAE + + P I+ F +G EA +++ARA+TGR +I F G +HG L
Sbjct: 87 TLAERINALAP-IDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRT--LL 143
Query: 137 VKAGSG-VA--TLGLPDSPGVPKGATYETL---TAPFNDVSALENLFENNKG--EIAAII 188
A +G VA +G PG A Y + +S++E LF+ + ++AAI+
Sbjct: 144 TMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAIL 203
Query: 189 LEPVVGNSGF-IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246
LEP+ G GF +AP P+F++A+R + E+G LLI DEV TGF R A EY+ V PDL
Sbjct: 204 LEPIQGEGGFNVAP-PEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL 262
Query: 247 TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
T+ K +GGG+P+ A GR ++M+ AP G GT +GNPLA+ A + L + E
Sbjct: 263 ITMAKSLGGGMPISAVVGRAEVMDAPAPGG---LGGTYAGNPLAVAAALAVLDVIAE 316
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 143 bits (364), Expect = 5e-39
Identities = 100/314 (31%), Positives = 143/314 (45%), Gaps = 27/314 (8%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS--FGAP 74
+ F+ +G + D DG Y+D+ +GHA ++ AL E +K S + P
Sbjct: 14 DLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIP 73
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCY 128
+ LAE ++ + + V F NSG EA ++ AR + R RII FEG +
Sbjct: 74 --EQERLAERLVENSFA-DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAF 130
Query: 129 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 188
HG + G G P VP G PF D+ AL+ N AAI+
Sbjct: 131 HGRTLATIAAGGQEKYLEGF--GPLVP-GFDQ----VPFGDIEALKAAITPN---TAAIL 180
Query: 189 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247
+EP+ G G +FL +R++ ENG LLIFDEV G R A E+ GVTPD+
Sbjct: 181 IEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIM 240
Query: 248 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 307
+ K IGGG P+GA + + + P T GNPLAM G L + PG
Sbjct: 241 AVAKGIGGGFPLGACLATEEAAKGMTPGT---HGSTYGGNPLAMAVGNAVLDVILAPGFL 297
Query: 308 EYLNKITGELTQGI 321
+ + ++ L Q +
Sbjct: 298 DNVQRMGLYLKQKL 311
>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 142 bits (359), Expect = 8e-38
Identities = 96/315 (30%), Positives = 149/315 (47%), Gaps = 31/315 (9%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 74
P+VF KGS +WD +G +Y+D++ ++ GH +++ AL E +K T +F
Sbjct: 58 PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYND 117
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE---------RIIKFE 125
AE + S +MV +N+G E ++LAR + G E I+
Sbjct: 118 KF--PEFAEYLTSMF-GYDMVLPMNTGAEGVETAIKLARKW-GYEKKGIPKNEAIIVSCC 173
Query: 126 GCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 184
GC+HG + + AT G P PG K F D+ ALE +FE + I
Sbjct: 174 GCFHGRTLAAISMSCDNEATRGFGPLLPGHLK--------VDFGDLDALEKIFEEDGDRI 225
Query: 185 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT 243
AA + EP+ G +G + P +L A+R + ++ L+I DE+ TG R A ++ V
Sbjct: 226 AAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVR 285
Query: 244 PDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 302
PD+ LGK +GGG +PV A +D+M + P T GNPLA + L+ ++
Sbjct: 286 PDVVILGKALGGGVIPVSAVLADKDVMLCI---KPGEHGSTFGGNPLASAVAMAALQVVQ 342
Query: 303 EPGTYEYLNKITGEL 317
+ E K+ EL
Sbjct: 343 DEKLAERSAKLGQEL 357
>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae [Biosynthesis of cofactors,
prosthetic groups, and carriers, Biotin].
Length = 417
Score = 138 bits (350), Expect = 7e-37
Identities = 104/348 (29%), Positives = 154/348 (44%), Gaps = 61/348 (17%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
P+ + +G +++D DG EYID + SW I GH ++ AA+ E + K LE
Sbjct: 14 PLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLDK---------LE 64
Query: 79 NV------------LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRE 119
+V LAE ++ P +E V F +SG+ A L++A + G+
Sbjct: 65 HVMFGGLTHEPAIELAERLVEITPEGLEKVFFSDSGSVAVEVALKMALQYWQNQGRPGKT 124
Query: 120 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG---VPKGATYETLTAPFNDV------ 170
R + F YHG D F + + D G + + +E + P
Sbjct: 125 RFLAFRNGYHG--DTF--------GAMSVGDVGGFHALFEPLLFEVVFIPAPPCYRCWDP 174
Query: 171 --------SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLI 221
+ALE L E + EIAA I+EP+V G G P++L +R + E G LLI
Sbjct: 175 DDCEAECLAALEALLEEHADEIAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVLLI 234
Query: 222 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAG 276
DE+ TGF R A E+ GVTPD+ L K + GG LP+ A +I E
Sbjct: 235 ADEIATGFGRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAFYSDDEGK 294
Query: 277 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324
T +GNPLA A + +L L+E E + +I +L G+
Sbjct: 295 AFMHGHTYTGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPL 342
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 138 bits (350), Expect = 1e-36
Identities = 91/287 (31%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 28 SHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENVLAEMV 85
+ + D G E+ID +G +G +GH + V++A+ + K L L +LA+ +
Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTL 133
Query: 86 ISAVP-SIEMVRFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGS 141
+ P ++ F NSGTE+ L+LA+A+ G+ I G +HG + L + +
Sbjct: 134 AALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGAL--SAT 191
Query: 142 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK--GE-IAAIILEPVVGNSGF 198
+T P P +P PF ++ A+ K G+ +AA+ILEP+ G G
Sbjct: 192 AKSTFRKPFMPLLP-----GFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGV 246
Query: 199 IAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG- 256
I P +L A+R++ E GALLI DEV TG R A E+ V PD+ L K +GGG
Sbjct: 247 ILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGV 306
Query: 257 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
+P+GA ++ ++ P T GNPLA A + T+ L E
Sbjct: 307 MPIGATIATEEVFSVLFD-NPFLHTTTFGGNPLACAAALATINVLLE 352
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 137 bits (347), Expect = 1e-36
Identities = 94/282 (33%), Positives = 130/282 (46%), Gaps = 39/282 (13%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVL--AE 83
+GS +WD G EYID+ G +GHA + AL E K G E VL A+
Sbjct: 29 EGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAK 88
Query: 84 MVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLV 137
+I A + + V F NSG EA L+LAR + + + I+ F+ +HG F V
Sbjct: 89 KLIDATFA-DRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRT-LFTV 146
Query: 138 KAGSGVATLGLP----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 193
AG G P D +P + A +ND+++ L ++ A+I+EP+
Sbjct: 147 SAG------GQPKYSQDFAPLPPDIRH----AAYNDLNSASALIDDQT---CAVIVEPIQ 193
Query: 194 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 252
G G I FL +R + + ALLIFDEV TG R A ++GVTPD+ T K
Sbjct: 194 GEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLTTAKA 253
Query: 253 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAG----TLSGNPLA 290
+GGG P+GA M + G T GNPLA
Sbjct: 254 LGGGFPIGA-------MLTTEKCASVMTVGTHGTTYGGNPLA 288
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known bacterial examples of the enzyme.
The best archaeal matches are presumed but not trusted
to have the equivalent function. The degree of sequence
difference between this set and known eukaryotic
(mitochondrial) examples is greater than the distance to
some proteins known to have different functions, and so
separate models are built for prokaryotic and eukaryotic
sets. E. coli has two isozymes. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 420
Score = 137 bits (346), Expect = 2e-36
Identities = 98/335 (29%), Positives = 151/335 (45%), Gaps = 30/335 (8%)
Query: 13 KSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF 71
VG P+ +G+ + D+DGN ID+ IGH+ +V+ A+ + + T
Sbjct: 9 SGVGVTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHT 68
Query: 72 G---APCLLENVLAEMVISAVPSIEMVR--FVNSGTEACMGVLRLARAFTGRERIIKFEG 126
P LAE + P + F NSG EA +++AR++TGR ++ F+
Sbjct: 69 CFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDH 128
Query: 127 CYHGHAD----------PFLVKAGSGV---ATLGLPDSPGVPKGATYETLTAPFNDV-SA 172
+HG + P+ K+G G P G + L+ + +A
Sbjct: 129 GFHGRTNMTMALTAKVMPY--KSGFGPFAPEVYRAPLPYPYRDGLLDKQLS--TDGELAA 184
Query: 173 LENLFENNKG--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229
+F + G +AA+++EPV G GFI P F+ A+ +E+G + I DEV TGF
Sbjct: 185 ARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFA 244
Query: 230 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 289
R A E+ G PDL T K + GLP+ GR +IM+ AP G GT +GNPL
Sbjct: 245 RTGAMFACEHEGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPGG---LGGTYAGNPL 301
Query: 290 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324
A A + L ++ G E +I +T +
Sbjct: 302 ACAAALAVLAIIESEGLIERARQIGRLVTDRLTTL 336
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 133 bits (337), Expect = 1e-35
Identities = 94/286 (32%), Positives = 135/286 (47%), Gaps = 32/286 (11%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMV 85
+G ++WD G Y+D + G ++GH + + + E ++K G P EM+
Sbjct: 14 EGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAG-PMFEHEEKEEML 72
Query: 86 --ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV 143
+S + E V NSGTEA L+ AR +TGR+ II +HG
Sbjct: 73 EELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGR------------ 120
Query: 144 ATLGLPDSPGVPK-GATYETLTA-----PFNDVSALENLFENNKGEIAAIILEPVVGNSG 197
T+G + PK +E L PFNDV A + E E AA+I EP+ G G
Sbjct: 121 -TMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAK---EAITKETAAVIFEPIQGEGG 176
Query: 198 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGL 257
+ K +F+ +R +T++ GALLI DEV +G R A E++ V PD+ T+GK IG G+
Sbjct: 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGNGV 236
Query: 258 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
PV D+ G T GNPLA A TL+ L+
Sbjct: 237 PVSLTLTNFDV-----ERGK--HGSTFGGNPLACKAVAVTLRILRR 275
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 133 bits (337), Expect = 5e-35
Identities = 96/286 (33%), Positives = 134/286 (46%), Gaps = 47/286 (16%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENV--- 80
+GS +WD G EYID+ G +GH ++ AL E +K L + NV
Sbjct: 30 EGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEK--------LWHISNVFTN 81
Query: 81 -----LAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR--AFT----GRERIIKFEGCYH 129
LA+ +I A + E V F NSG EA +LAR A + II F +H
Sbjct: 82 EPALRLAKKLIDATFA-ERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFH 140
Query: 130 GHADPFLVKAGSGVATLGLPD-SPG---VPKGATYETLTAPFNDVSALENLFENNKGEIA 185
G F V G G P S G P T+ PFND++A++ + +++
Sbjct: 141 GRT-LFTVSVG------GQPKYSDGFGPKPADITH----VPFNDLAAVKAVIDDHT---C 186
Query: 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTP 244
A+++EP+ G G I P+FL +R + ++ ALLIFDEV TG R A ++GVTP
Sbjct: 187 AVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTP 246
Query: 245 DLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 290
D+ T K +GGG P+GA +I T GNPLA
Sbjct: 247 DILTSAKALGGGFPIGAMLTTAEIASHFKVG---THGSTYGGNPLA 289
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis (OMNI|PG1271), and
the other from Staphylococcus aureus (OMNI|SA0170).
After homology searching using BLAST it was determined
that these two sequences were most closely related to
ornithine aminotransferases. This model's seed includes
one characterized hit, from Bacillus subtilis
(SP|P38021).
Length = 401
Score = 132 bits (334), Expect = 1e-34
Identities = 85/302 (28%), Positives = 139/302 (46%), Gaps = 33/302 (10%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFGAP 74
P+VF +G H+WD++G Y+D++ ++ GH +++ AL E +K T +F
Sbjct: 20 PVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYND 79
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEG 126
E AE V + + V +N+G EA ++LAR + + I+ +G
Sbjct: 80 VFGE--FAEYVTK-LFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKG 136
Query: 127 CYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 185
+HG + + + P PG K P+N++ ALE E++ +
Sbjct: 137 NFHGRTLGAISMSTDPDSRTNFGPYVPGFKK--------IPYNNLEALEEALEDHGPNVC 188
Query: 186 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG---AQEYFGV 242
A I+EP+ G +G + P +L +R + ++ LLI DE+ TG L G ++ V
Sbjct: 189 AFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTG--LGRTGKLLCVDHENV 246
Query: 243 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL 301
PD+ LGK + GG PV A D+M + P T GNPLA + L+ L
Sbjct: 247 KPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGE---HGSTYGGNPLACAVAVAALEVL 303
Query: 302 KE 303
+E
Sbjct: 304 EE 305
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason [Energy
metabolism, Amino acids and amines].
Length = 397
Score = 131 bits (330), Expect = 3e-34
Identities = 94/285 (32%), Positives = 134/285 (47%), Gaps = 31/285 (10%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
P + +GS +WD G EYID+ G +GHA +++ AL E K G E
Sbjct: 18 PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNE 77
Query: 79 NV--LAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHG 130
V LA+ ++ A + + V F NSG EA L+LAR + + I+ F+ +HG
Sbjct: 78 PVLRLAKKLVDATFA-DKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHG 136
Query: 131 HADPFLVKAGSGVATLGLP----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 186
F V G G P +P G + AP+ND++A + L + A
Sbjct: 137 RT-LFTVSVG------GQPKYSQGFAPLPGGIKH----APYNDLAAAKALISDKT---CA 182
Query: 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245
+I+EP+ G G + P FL +R + + ALLIFDEV TG R A ++GVTPD
Sbjct: 183 VIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD 242
Query: 246 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 290
+ T K +GGG P+GA +I + T GNPLA
Sbjct: 243 ILTSAKALGGGFPIGAMLTTTEIAAHLKVGT---HGTTYGGNPLA 284
>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 132 bits (333), Expect = 3e-34
Identities = 109/338 (32%), Positives = 164/338 (48%), Gaps = 50/338 (14%)
Query: 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTSFGA- 73
G P S G+ + D+DGN+YID+ G+ G +GH+ +V AL + + + T F
Sbjct: 35 GIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNVM 94
Query: 74 --PCLLENVLAEMVISAVPSI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 129
+E LAE + + P + V F+NSG EA +++AR +T R+ II F +H
Sbjct: 95 MYEPYIE--LAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFH 152
Query: 130 GHAD----------PFLVKAGSGVATLGLPDSPGV-----------PKGATYETLTAPFN 168
G P+ K G G P +P V P+G T E
Sbjct: 153 GRTLMTMTMTSKVKPY--KFGFG------PFAPEVYKAPFPYEYRRPEGLTEEQYDDFM- 203
Query: 169 DVSALENLF--ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 226
+ +N F E IAA+++EPV G GFI P F+ +R I E+G L + DE+
Sbjct: 204 -IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ 262
Query: 227 TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 285
TGF R A E+F V PDL T+ K +G G+P+ GR++IM+ AP G + GT +
Sbjct: 263 TGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESAP-GEL--GGTYA 319
Query: 286 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIID 323
G+PL A + L +++ E LN EL + +++
Sbjct: 320 GSPLGCAAALAVLDIIEK----ENLNDRAIELGKVVMN 353
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase [Central intermediary metabolism,
Other].
Length = 442
Score = 130 bits (328), Expect = 9e-34
Identities = 88/320 (27%), Positives = 143/320 (44%), Gaps = 31/320 (9%)
Query: 7 SPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 66
S VR++ P F +G + D++G EY+D++ G +GH + + + ++
Sbjct: 12 SNVRSY--PRKLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQ 69
Query: 67 KGT---SFGAPCLLENVLAEMVISAVPSIEM---VRFVN-SGTEACMGVLRLARAFTGRE 119
G + L++ E +++ +P +M ++F SG +A ++LA+ +TGR
Sbjct: 70 SGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRT 129
Query: 120 RIIKFEGCYHGHADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLTAPF 167
+I F G +HG L G GV + P P G E +
Sbjct: 130 NVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSN-- 187
Query: 168 NDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224
+ EN E+ + + AA+ILE + G G +A ++L IR +T+++ LI DE
Sbjct: 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDE 247
Query: 225 VMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGT 283
V GF R A E+ G+ PD + K +GGGLP+ + + PAG GT
Sbjct: 248 VQAGFGRSGTMFAFEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQPAG---HTGT 303
Query: 284 LSGNPLAMTAGIHTLKRLKE 303
GN LAM G L K+
Sbjct: 304 FRGNQLAMVTGTEALNYWKD 323
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 128 bits (322), Expect = 4e-33
Identities = 99/316 (31%), Positives = 158/316 (50%), Gaps = 21/316 (6%)
Query: 24 SVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENV 80
S + + + D++GNEYID+ GH ++AA+ + +++ T P
Sbjct: 28 SAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVT 87
Query: 81 LAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 138
LAE + + P F +G EA +++ARA TGR +I F G +HG ++
Sbjct: 88 LAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRT--YMTM 145
Query: 139 AGSG-VA--TLGLPDSPG----VPKGATYETLTAPFNDVSALENLFENN--KGEIAAIIL 189
A +G VA +G PG VP + ++ + + A+E LF+++ ++AAII
Sbjct: 146 ALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQ-DSLDAIERLFKSDIEAKQVAAIIF 204
Query: 190 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 248
EPV G GF + + AIRR+ E+G ++I DEV +GF R A +++ PDL T
Sbjct: 205 EPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMT 264
Query: 249 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308
+ K + GG+P+ G +IM+ AP G GT +GNPLA+ A L + + E
Sbjct: 265 MAKSLAGGMPLSGVVGNANIMDAPAPGG---LGGTYAGNPLAVAAAHAVLNIIDKESLCE 321
Query: 309 YLNKITGELTQGIIDA 324
N++ L +IDA
Sbjct: 322 RANQLGQRLKNTLIDA 337
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 125 bits (316), Expect = 2e-32
Identities = 98/350 (28%), Positives = 142/350 (40%), Gaps = 79/350 (22%)
Query: 22 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVL 81
F S KG ++D++G EY+D +GH D + A+ E L
Sbjct: 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQ-------------AGTL 47
Query: 82 AEM--VISAVPSIEMVR------------FVNSGTEACMGVLRLARAFTGRER------- 120
A + V +P +E+ + F NSGTEA ++ AR + R R
Sbjct: 48 AHVSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQ-RVRAPDKKDP 106
Query: 121 -------IIKFEGCYHGHADPFLVKAGSGVATLG-----------LPDSPGVPKGATYET 162
+ F +HG TLG P P +P G T+
Sbjct: 107 AASSATEFVSFSNSFHGR-------------TLGALALTSKEQYRTPFEPLMP-GVTF-- 150
Query: 163 LTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 222
+ ++ A L + KG+ AA+ +EPV G G +FL +R + E GALL+F
Sbjct: 151 --VEYGNLEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVF 206
Query: 223 DEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPA-GPMYQ 280
DEV G R Y A E +GV PD+ TL K + GGLP+GA + E VA A P
Sbjct: 207 DEVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGGLPIGAV----LVTEKVASAINPGDH 262
Query: 281 AGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGH 330
T +G PL A + L ++ +PG + K L + + H
Sbjct: 263 GSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPH 312
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 125 bits (315), Expect = 3e-32
Identities = 94/291 (32%), Positives = 138/291 (47%), Gaps = 21/291 (7%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
I F +G+++ D DG +Y+D+ G +G QV AL + G + +P L
Sbjct: 12 AIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQAL--QKQAGLIWHSPNLYL 68
Query: 79 NVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL 136
N L E V + + + F NSG EA +++AR TG++ II F+ +HG +
Sbjct: 69 NSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSM 128
Query: 137 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 196
G G GVP +Y A FND+++++ L N AA++LE V G S
Sbjct: 129 SATGQDKIKDGF--GDGVP-HFSY----AIFNDLNSVKALVNKNT---AAVMLELVQGES 178
Query: 197 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGG 255
G + DF+ A+ +E G LLI DEV TG R A E++G+ PD+ TL K +
Sbjct: 179 GVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLAN 238
Query: 256 GLPVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 305
G+PVGA + + A G T GN L+M A TL + G
Sbjct: 239 GVPVGAMLAKSSL----GGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAG 285
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine [Central
intermediary metabolism, Polyamine biosynthesis].
Length = 442
Score = 125 bits (316), Expect = 4e-32
Identities = 95/283 (33%), Positives = 136/283 (48%), Gaps = 19/283 (6%)
Query: 32 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL--LENVLAEMVISAV 89
D GNE+ID +G +G +GH + V+AA+ + K L L +LA+ + +
Sbjct: 71 DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALT 130
Query: 90 P-SIEMVRFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGSGVAT 145
P ++ F NSGTE+ L+LA+A+ G+ I G +HG + L + +
Sbjct: 131 PGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGAL--SATAKPA 188
Query: 146 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPK 202
P P +P G + F D+ A+ K ++AAIILEP+ G G I P
Sbjct: 189 FRKPFMPLLP-GFHH----VAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPP 243
Query: 203 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVG 260
+L A+R + E GALLI DEV TG R A E+ GV PD+ L K +GGG +P+G
Sbjct: 244 EGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIG 303
Query: 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
A + V P T GNPLA A + T+ L E
Sbjct: 304 ATIATEAVFS-VLFDNPFLHTTTFGGNPLACAAALATINELLE 345
>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 123 bits (312), Expect = 3e-31
Identities = 97/319 (30%), Positives = 140/319 (43%), Gaps = 43/319 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPC--- 75
P+V +GS++WD +G Y+D+ IGH +V+AA+ E + + AP
Sbjct: 36 PMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTV-APAHAN 94
Query: 76 LLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 134
+ A ++ P + V F N G +A +R+AR TGR +++ YHG
Sbjct: 95 DARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHG---- 150
Query: 135 FLVKAGSGVATLG----LPDSPGVPKGATYETLTAPFNDVS-------------ALENL- 176
GS + G P+ G + PF S AL +L
Sbjct: 151 ---GTGSAINLTGDPRRWPNDTGRAGVVHF---FGPFLYRSEFHATTEEEECERALAHLE 204
Query: 177 ----FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231
E IAAI+LE V G +G + P P +L +R + +G +LI DEVM GF R
Sbjct: 205 RVIELEG-PSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRT 263
Query: 232 AYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPL 289
A E+FGV PDL T K + G +P+G I A Y G T SG+PL
Sbjct: 264 GKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADR--PYPGGLTYSGHPL 321
Query: 290 AMTAGIHTLKRLKEPGTYE 308
A A + T+ ++E G E
Sbjct: 322 ACAAAVATINAMEEEGIVE 340
>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 121 bits (304), Expect = 2e-30
Identities = 96/312 (30%), Positives = 145/312 (46%), Gaps = 37/312 (11%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCL-- 76
P+ +G + D++GN+Y+D + G +GH VL ++ + + G L
Sbjct: 41 PLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTT 100
Query: 77 -LENVLAEMVISAVPSIE---MVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGCYHGH 131
L++ +E ++S +P ++F SG +A ++LA+ +TGR +I F G YHG
Sbjct: 101 PLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGM 160
Query: 132 ADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 179
L G GV + P P G E V AL FEN
Sbjct: 161 THGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA------GVKALTYYFEN 214
Query: 180 NKGEI-------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231
++ AA+ILE + G G ++L IR +T+++G LLI DEV GF R
Sbjct: 215 FIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFART 274
Query: 232 AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 291
A E+ G+ PD+ + K +GGGLP+ G +++ + P G GT GN LAM
Sbjct: 275 GKMFAFEHAGIEPDIIVMSKAVGGGLPLAVLGIKKE-FDAWQPGG---HTGTFRGNQLAM 330
Query: 292 TAGIHTLKRLKE 303
G+ TLK LKE
Sbjct: 331 ATGLTTLKILKE 342
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 120 bits (304), Expect = 3e-30
Identities = 110/352 (31%), Positives = 158/352 (44%), Gaps = 66/352 (18%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWG----PAIIGHADDQ 56
MP N R FK+ P + S +G + D DG + +D G+ G A GH +
Sbjct: 20 MPFTAN---RQFKA---APRLLVSAEGMYYTDADGRKILD--GTAGLWCCNA--GHGRPE 69
Query: 57 VLAALGETMKK-----GTSFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLR 110
++ A+ G P E LAE + P ++ V F NSG+E+ L+
Sbjct: 70 IVEAVARQAATLDYAPAFQMGHPLAFE--LAERLAELAPGGLDHVFFTNSGSESVDTALK 127
Query: 111 LARAF------TGRERIIKFEGCYHG-------------HADPFLVKAGSGV----ATLG 147
+A A+ R R+I E YHG + F GV TL
Sbjct: 128 IALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGG-LLPGVDHLPHTLD 186
Query: 148 LPD---SPGVPK-GATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPK 202
LP+ S G P+ GA D LE L + IAA+I+EP+ G++G + P
Sbjct: 187 LPENAFSKGQPEHGAE-------LAD--DLERLVALHDASTIAAVIVEPMAGSAGVLVPP 237
Query: 203 PDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVG 260
+L +R I ++G LLIFDEV+TGF RL A E FGVTPD+ T K + G +P+G
Sbjct: 238 KGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMG 297
Query: 261 AYGGRRDIME--MVAPAGPM--YQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 308
A +I + M P + + T S +P+A AG+ TL +E +E
Sbjct: 298 AVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFE 349
>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 118 bits (298), Expect = 2e-29
Identities = 99/307 (32%), Positives = 147/307 (47%), Gaps = 56/307 (18%)
Query: 32 DIDGNEYIDYVGSWGPAI--IGHADDQVLAALGETMKKGTSFGAPCLLEN------VLAE 83
D+DGN ID GS G A+ +G++ +V+ A+ E + + F C + +AE
Sbjct: 52 DVDGNRLIDL-GS-GIAVTSVGNSAPRVVEAVREQVAR---FTHTCFMVTPYEGYVAVAE 106
Query: 84 MVISAVPSIEMVRFV--NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD-------- 133
+ P R NSG EA +++AR++TGR+ ++ F+ YHG +
Sbjct: 107 QLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAK 166
Query: 134 --PFLVKAGSGVATLGLPDSPGVPKGATYET-LTAPFNDVSALEN-----------LFEN 179
P+ K+G G P +P V Y ++ P+ D L + E
Sbjct: 167 SMPY--KSGFG------PFAPEV-----YRAPMSYPYRDPKGLATDGEEAAARAITVIEK 213
Query: 180 NKG--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 236
G +AA+I+EP+ G GFI P FL A+ +ENG + I DEV TGF R A
Sbjct: 214 QVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFA 273
Query: 237 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 296
E+ G+ PDL T K I GGLP+ A GR +IM+ P G GT GNP+A A +
Sbjct: 274 CEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPHPGG---LGGTYGGNPVACAAALA 330
Query: 297 TLKRLKE 303
++ ++E
Sbjct: 331 AIETIEE 337
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 114 bits (286), Expect = 3e-28
Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 40/321 (12%)
Query: 20 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK--GTS---FGAP 74
+V + +GS +WD G EY+D +GH D ++AAL E K TS + AP
Sbjct: 24 VVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAP 83
Query: 75 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR---AFTGR----ERIIKFEGC 127
L LAE +++A E V NSGTEA ++L R + GR I+ F G
Sbjct: 84 PLK---LAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGS 140
Query: 128 YHGHADPFLVKAGSGVATLGLPDSPGVPK-GATYETLTA-----PFNDVSALENLFENNK 181
+HG TL + PK YE L FNDV ALE
Sbjct: 141 FHGR-------------TLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG-- 185
Query: 182 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 240
G++AA++LEP+ G G + P FL +R + ++ ALL+ DE+ G R A
Sbjct: 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQE 245
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 300
VTPD+ TL K +GGG P+GA + E + T GNPLA L++
Sbjct: 246 QVTPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGA---HGTTFGGNPLAAAVARVALRK 302
Query: 301 LKEPGTYEYLNKITGELTQGI 321
L P + + + L G+
Sbjct: 303 LASPQIAANVARQSAALRAGL 323
>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 114 bits (288), Expect = 5e-28
Identities = 95/330 (28%), Positives = 139/330 (42%), Gaps = 72/330 (21%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--------TS 70
P+ +G ++ D++G ++ID + G +GH V+ A+ + + T+
Sbjct: 46 PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTT 105
Query: 71 ----------FGAPCLLENVLAEMVISAVPSIEMVRFVN-SGTEACMGVLRLARAFTGRE 119
F L E E I +F +GT+A L+L + TGR
Sbjct: 106 PVKDQFVQDLFA--SLPEAFAREAKI---------QFCGPTGTDAVEAALKLVKTATGRS 154
Query: 120 RIIKFEGCYHGHADPFLVKAGS------------GVATL----------GLPDSPGVPKG 157
++ F+G YHG + L G+ GV L GL GV
Sbjct: 155 TVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRAN 214
Query: 158 ATYETLTAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITK 214
Y LENL ++ + + AA+ILE V G G I ++L +RRIT+
Sbjct: 215 LHY------------LENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITE 262
Query: 215 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA 273
E G LI DE+ +GF R A E+ G+ PD+ L K IGG LP+ R +
Sbjct: 263 EAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWLDTW-- 320
Query: 274 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
P AGT GN +AM AG TL+ +KE
Sbjct: 321 --QPGAHAGTFRGNQMAMAAGSATLRYIKE 348
>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 111 bits (279), Expect = 6e-27
Identities = 98/322 (30%), Positives = 138/322 (42%), Gaps = 68/322 (21%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
PI +G++++ DG E ID + SW A GH + A+ E + + L+
Sbjct: 25 PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDR---------LD 75
Query: 79 NV------------LAEMVISAVP-SIEMVRFVNSGTEA-------CMGVLRLARAFTGR 118
+V LA+ +++ P ++ V F +SG+ A + R R GR
Sbjct: 76 HVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRN-RGEPGR 134
Query: 119 ERIIKFEGCYHG--------------HA--DPFLVKAGSGVATLGLPDSPGVPKGATYET 162
R + G YHG HA P L + T P P G T
Sbjct: 135 SRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE----QVTAPFP-----PDGYEQAT 185
Query: 163 LTAPFNDVSALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLI 221
L ALE L E + GEIAA I+EP+V G G + P +L +RRI +G LLI
Sbjct: 186 L-------DALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLI 238
Query: 222 FDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAG 276
FDE+ TGF R A E GV+PD+ L K + GG LP+ A +I E A
Sbjct: 239 FDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAK 298
Query: 277 PMYQAGTLSGNPLAMTAGIHTL 298
+ + + NPLA A +L
Sbjct: 299 AFMHSPSYTANPLACAAANASL 320
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 106 bits (267), Expect = 2e-25
Identities = 102/346 (29%), Positives = 148/346 (42%), Gaps = 54/346 (15%)
Query: 1 MPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA 60
MP N R FK P + + KG + DG +D GH +++ A
Sbjct: 17 MPFTAN---RQFKK---APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEA 70
Query: 61 LGE---TMKKGTSFG----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 113
+ + +F L N +AE+ A + V F NSG+E+ L++A
Sbjct: 71 VRAQAGELDYAPAFQMGHPKAFELANRIAEI---APGGLNHVFFTNSGSESVDTALKIAL 127
Query: 114 AF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLG---------LPDSPGVPKGA 158
A+ R R+I E YHG + G V + LP +P
Sbjct: 128 AYHRARGEGSRTRLIGRERGYHG-----VGFGGISVGGIVPNRKAFGALLPGVDHLPH-- 180
Query: 159 TYETLTAPFND---------VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNA 208
T + F+ LE L ++ IAA+I+EPV G++G + P +L
Sbjct: 181 TLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQR 240
Query: 209 IRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRR 266
+R I ++G LLIFDEV+TGF RL A +YFGVTPDL T K + G +P+GA
Sbjct: 241 LREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSS 300
Query: 267 DIMEMV---APAGPMYQAG-TLSGNPLAMTAGIHTLKRLKEPGTYE 308
+I + AG + G T SG+PLA A + TL + G
Sbjct: 301 EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLT 346
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 100 bits (252), Expect = 1e-23
Identities = 86/298 (28%), Positives = 131/298 (43%), Gaps = 28/298 (9%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLE 78
PIV +G + D +GN Y+D + ++ GH +++ AL + K T +
Sbjct: 23 PIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVT-LTSRAFHS 81
Query: 79 NVLAEMV--ISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCY 128
+ L ++ + +MV +N+G EA ++ AR + + II EG +
Sbjct: 82 DQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNF 141
Query: 129 HGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 187
HG + + G P PG+ K P+ D+ AL+ N AA
Sbjct: 142 HGRTMAAVSLSSEEEYKRGFGPMLPGIKK--------IPYGDLEALKAAITPNT---AAF 190
Query: 188 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 246
++EP+ G +G P FL A R + KE L I DE+ TG R A ++ VTPD+
Sbjct: 191 LVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDM 250
Query: 247 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
LGK +GGG P+ RDI+ + P T GNPLA I L+ L+E
Sbjct: 251 YILGKALGGGVFPISCVAANRDILGVFTPGS---HGSTFGGNPLACAVSIAALEVLEE 305
>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 100 bits (251), Expect = 3e-23
Identities = 93/331 (28%), Positives = 135/331 (40%), Gaps = 58/331 (17%)
Query: 17 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAI--IGHADDQVLAALGETMKK----GTS 70
V + +G ++ D G Y+D S G A+ +GH+ +V+AA+ + + TS
Sbjct: 11 ATLPVAVAGEGIYLIDATGKRYLD--ASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS 68
Query: 71 FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIK 123
F E LA+ +++A P +E V FV+ G+EA L+LAR + R I
Sbjct: 69 FFTTEPAE-ALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIA 127
Query: 124 FEGCYHGHADPFLVKAGSGVATLG-LPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 182
YHG+ TLG L + + L + VS E G
Sbjct: 128 RRQSYHGN-------------TLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAG 174
Query: 183 E------------------------IAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENG 217
E +AA + E VVG +G + P P + IR + G
Sbjct: 175 ESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYG 234
Query: 218 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA 275
LLI DEVM G R A E GV PDL T+ K +G G P+GA I + +A
Sbjct: 235 VLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADG 294
Query: 276 GPMYQAG-TLSGNPLAMTAGIHTLKRLKEPG 305
+Q G T G+ A A + + + E G
Sbjct: 295 SGFFQHGHTYLGHATACAAALAVQRVIAEDG 325
>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 97.5 bits (243), Expect = 4e-22
Identities = 93/335 (27%), Positives = 137/335 (40%), Gaps = 72/335 (21%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGP--AIIGHADDQVLAALGETMKK--------GTSFGAPC 75
KG +++D +GN+Y D GS G A IGH ++ A+ E ++ TS A
Sbjct: 21 KGVYLYDQNGNKYFD--GSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPA-- 76
Query: 76 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCYH 129
E + ++ + + FVNSG+EA +++A R G+ +I+ YH
Sbjct: 77 --EKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYH 134
Query: 130 GHADPFLVKAGSGVATLG-----------------LPDSPGVPKGATY---ETLTAPFND 169
G T+G L D P + Y P
Sbjct: 135 G-------------ITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181
Query: 170 VSA---LENLFENNKGE-IAAIILEPVVGNSG-FIAPKPDFLNAIRRITKENGALLIFDE 224
++ LE E E IAA I EP++G +G + P + I+ I L I DE
Sbjct: 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADE 241
Query: 225 VMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG 282
VMTG R A E++GV PD+ TLGK +G G P+ A +ME + +G
Sbjct: 242 VMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSG 301
Query: 283 -TLSGNPLAMTAGI--------HTL-KRLKEPGTY 307
TLS NPL+ + H L ++ E G Y
Sbjct: 302 HTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEY 336
>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore (SP|Q9Z3R2) or
1,3-diaminopropane (SP|P44951) biosynthesis. The family
TIGR00709 previously included both groups but has now
been revised to exclude the ectoine biosynthesis
proteins of this family. Ectoine is a compatible solute
particularly effective in conferring salt tolerance
[Cellular processes, Adaptations to atypical
conditions].
Length = 412
Score = 95.4 bits (238), Expect = 1e-21
Identities = 87/354 (24%), Positives = 138/354 (38%), Gaps = 64/354 (18%)
Query: 5 VNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 64
V S R+F P VF+ KGS +WD DG EYID+ G GH + ++ AL +
Sbjct: 10 VRSYCRSF------PTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDY 63
Query: 65 MKKGTSFGAPCLLENVLAEMVISAVPSIE-MVRFVNS-----------------GTEACM 106
+ + ++ + ++ E + F GT A
Sbjct: 64 LAD----------DGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVE 113
Query: 107 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV--ATLGLPDSPGVPKGATYET-L 163
L+LAR TGR ++ F +HG L G+ G+P S Y+ L
Sbjct: 114 SALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSR--MPYDGYL 171
Query: 164 TAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 220
+ ++ E L E++ + AA+ILE V G G ++L + ++ + + LL
Sbjct: 172 GGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILL 231
Query: 221 IFDEVMTGFRLAYGGAQEYF-----GVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAP 274
I D++ G G +F G+ PD+ L K I G GLP+ + ++ P
Sbjct: 232 IVDDIQAG----CGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLA--------LTLIKP 279
Query: 275 A----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 324
P GT GN LA L+ +E + E+ Q +D
Sbjct: 280 ELDVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDR 333
>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 94.5 bits (235), Expect = 6e-21
Identities = 103/351 (29%), Positives = 160/351 (45%), Gaps = 50/351 (14%)
Query: 11 AFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYV-GSWGPAIIGHADDQVLAALGETMKKGT 69
++S +P+V + +GS+++DI+G +Y+D + G W A+ G ++ +++AA E + K
Sbjct: 64 GWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLP 122
Query: 70 ---SF----GAPCLLENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRLARAFT---G 117
SF P L LA+ ++ + +M V F NSG+EA ++L + G
Sbjct: 123 FYHSFWNRTTKPSL---DLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYNNALG 179
Query: 118 RE---RIIKFEGCYHGHADPFLVKAG-SGVATL----GLP-------DSP-----GVPKG 157
R + I YHG L+ A SG+ L LP D P +P G
Sbjct: 180 RPNKKKFIARSKSYHGST---LISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP-G 235
Query: 158 ATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 216
T E + D LENL E IAA I EPV+G G I P + I+ + K+
Sbjct: 236 ETEEEFSTRLAD--NLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY 293
Query: 217 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP 274
L I DEV+ F RL + + + PDL +L K + +P+GA +I +++
Sbjct: 294 DILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHS 353
Query: 275 A----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321
G T SG+P++ + LK KE E++NKI GI
Sbjct: 354 QSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGI 404
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 93.1 bits (231), Expect = 1e-20
Identities = 80/313 (25%), Positives = 143/313 (45%), Gaps = 37/313 (11%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK------GTSFG 72
P+V G+ + D+DGN +ID++ A G++ +++ A+ E + G +
Sbjct: 36 PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIGYTHS 95
Query: 73 APCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 130
+ +AE + P IE V F SG++A +++++ T R I+ F G YHG
Sbjct: 96 ERAIR---VAEKLAEISP-IENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHG 151
Query: 131 HA------DPFLVKAGSGVATLGLPDSPGVPKGATYETL------TAPFNDVSALENLFE 178
F G + L +P+ +P Y P ++ + E
Sbjct: 152 QTLGATSVAAFQSSQKRGFSPL-MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLE 210
Query: 179 N-------NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R 230
N E+AA+ EP+ G++G + P +F ++++ E+G LL+ DEV TG R
Sbjct: 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGR 270
Query: 231 LAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLA 290
A E+F V PDL GK + G+ + GR+++M++ + + + T + NP+
Sbjct: 271 TGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTSGSALL----TPAANPVI 326
Query: 291 MTAGIHTLKRLKE 303
A TL+ ++E
Sbjct: 327 SAAAEATLEIIEE 339
>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 92.2 bits (229), Expect = 2e-20
Identities = 90/317 (28%), Positives = 132/317 (41%), Gaps = 56/317 (17%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT----SFG-- 72
+V +G +WD DGN Y+D + ++ GH ++LAA+ E + T +F
Sbjct: 24 DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRND 83
Query: 73 --APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERII 122
AP E ++A+ V +NSG EA ++ R + G+ II
Sbjct: 84 QLAPLYEE-------LAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEII 136
Query: 123 KFEGCYHGH--------ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 174
+HG DP + G G P +PG PF D ALE
Sbjct: 137 VCADNFHGRTLSIVGFSTDP-DARGGFG------PFTPGFR--------VVPFGDAEALE 181
Query: 175 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 233
N A ++EP+ G +G I P + +R + N LI DE+ TG R
Sbjct: 182 AAITPNT---VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK 238
Query: 234 GGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAG-TLSGNPLAM 291
A+E+ G+ D+T +GK + GG PV A +++ ++ P Q G T GNPLA
Sbjct: 239 LLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPG----QHGSTFGGNPLAC 294
Query: 292 TAGIHTLKRLKEPGTYE 308
LK L E G E
Sbjct: 295 AVARAALKVLTEEGMIE 311
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 91.3 bits (227), Expect = 4e-20
Identities = 78/273 (28%), Positives = 122/273 (44%), Gaps = 37/273 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPC 75
P++ + +G ++D++GNEY D V S + GH ++ A+ E + K T G
Sbjct: 39 PLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLAN 98
Query: 76 LLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCY 128
+ +LAE +I VP ++ V + +SG A +++A + ++R + + Y
Sbjct: 99 VPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAY 158
Query: 129 HGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV-----------------S 171
HG + A S V + L V +E + P+
Sbjct: 159 HGDT----IGAVS-VGAIDLFHQ--VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLE 211
Query: 172 ALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 229
LE L + EIAAII+EP+V G G I +L +R + + L I DEV TGF
Sbjct: 212 ELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFG 271
Query: 230 RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGA 261
R A E+ VTPD+ T GK + GG LP+
Sbjct: 272 RTGKMFACEHENVTPDIMTAGKGLTGGYLPIAI 304
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 91.0 bits (226), Expect = 5e-20
Identities = 90/313 (28%), Positives = 135/313 (43%), Gaps = 34/313 (10%)
Query: 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENV-LAEMVISAVP 90
DG ID + SW A+ G+ ++ AA + K + FG V LA+ ++ +P
Sbjct: 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILP 101
Query: 91 -SIEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEGCYHG---HA----DPFL 136
S+ + F +SG+ A +++A + R + YHG HA DP
Sbjct: 102 PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDP-- 159
Query: 137 VKAGSGVATLGLP-----DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 191
V G+ LP P + G + + L++L E EIAA+ILEP
Sbjct: 160 VTGMHGLFNHSLPVQYFLPQPSIKFGEEWND-----EAIEPLQDLLEQKGDEIAALILEP 214
Query: 192 VV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 249
VV G G P +L R + + G LLIFDE+ TGF R A E+ GV PD+ +
Sbjct: 215 VVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCI 274
Query: 250 GKIIGGG-LPVGAYGGRRDIMEMV--APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 306
GK + GG L + A I + + A T NPLA +++ L E
Sbjct: 275 GKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPW 334
Query: 307 YEYLNKITGELTQ 319
+ + +I +L Q
Sbjct: 335 QQNIQRIEAQLKQ 347
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 91.6 bits (228), Expect = 8e-20
Identities = 87/305 (28%), Positives = 129/305 (42%), Gaps = 37/305 (12%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPC 75
PI F G + D G Y+D + +GHA +V+AA + T +
Sbjct: 607 PIKFVRGWGVWLIDNRGRAYLDCFNN--VCHVGHAHPRVVAAAARQAARLNTNTRYLHDA 664
Query: 76 LLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH--- 131
++ AE + + +P + + FVNSG+EA LRLARA TG+ I + YHG
Sbjct: 665 IVA--YAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTE 722
Query: 132 -----ADPFLVKAGSG----VATLGLPDS-------PGVPKGATYETLTAPFNDVSALEN 175
F K G G V +PDS P G + A +
Sbjct: 723 LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAE-----QIAA 777
Query: 176 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AY 233
+ +G A I E + +G I +L + + + G + I DEV GF R+ ++
Sbjct: 778 MAAKGRG-PAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSH 836
Query: 234 GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 293
A E GV PD+ T+GK IG G P+GA R+I + + M T GNP++
Sbjct: 837 WWAFETQGVVPDIVTMGKPIGNGHPMGAVVTTREIAD--SFDNGMEYFNTFGGNPVSCAI 894
Query: 294 GIHTL 298
G+ L
Sbjct: 895 GLAVL 899
>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 89.3 bits (221), Expect = 2e-19
Identities = 91/323 (28%), Positives = 136/323 (42%), Gaps = 59/323 (18%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAA-------LGETMKKGTSFGAPCLLE 78
+G+ + DG Y+D V SW + GHA+ ++ AA L + M G + P +
Sbjct: 54 EGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTH-EPAVQ- 111
Query: 79 NVLAEMVISAVPS------IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKFEG 126
LAE +++ P + V + ++G+ L++A R R R I E
Sbjct: 112 --LAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALEN 169
Query: 127 CYHGHADPFLVKAGSGVATLGLPDSP---GVPKGATYETLTAPFND-------------- 169
YHG + L + D P V E+L AP D
Sbjct: 170 GYHGET----------IGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYA 219
Query: 170 ---VSALENLFENNKGEIAAIILEPVVGNSGFI-APKPDFLNAIRRITKENGALLIFDEV 225
AL+ LFE + GEI A+ILEP + +G + P +L R + +GA LI DE+
Sbjct: 220 LQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI 279
Query: 226 MTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMV---APAGPMYQ 280
TGF R A E GV PDL L K + GG LP+ A + + + +
Sbjct: 280 ATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLH 339
Query: 281 AGTLSGNPLAMTAGIHTLKRLKE 303
+ + +GNPLA A + TL +
Sbjct: 340 SHSYTGNPLACAAALATLDIFAD 362
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 88.1 bits (219), Expect = 5e-19
Identities = 79/312 (25%), Positives = 130/312 (41%), Gaps = 52/312 (16%)
Query: 17 GQPIVFDSVKGSHMWDIDGNEYIDYV-GSWGPAIIGHADDQVLAALGETMKKGTSFGAPC 75
+V +G+ + DI GN Y+D + G W +G+ ++ A E +K + F
Sbjct: 28 NATMVVAKAEGAWVTDIQGNRYLDGMSGLWC-VNVGYGRKELAEAAYEQLKTLSYF---- 82
Query: 76 LLENVLAEMVISAVPSIE-------------MVRFVNSGTEACMGVLRLARAF------T 116
+ S P+I+ ++ F NSG+EA ++AR +
Sbjct: 83 -------PLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEP 135
Query: 117 GRERIIKFEGCYHGHADPFLVKAG------------SGVATLGLPDSPGVPKGATYETLT 164
R + I YHG++ L G G + PD +P + +
Sbjct: 136 HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD 195
Query: 165 APFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 223
V ++ + E IAA+I+EP++ G + P D++ A++ I +++GALLI D
Sbjct: 196 LE--CVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISD 253
Query: 224 EVMTGF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGP---M 278
EV+ GF R +GV PD+ T+ K I LP+ A +++I E G
Sbjct: 254 EVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHF 313
Query: 279 YQAGTLSGNPLA 290
T GNP A
Sbjct: 314 RHVNTFGGNPAA 325
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 85.9 bits (213), Expect = 3e-18
Identities = 88/315 (27%), Positives = 126/315 (40%), Gaps = 38/315 (12%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK--------KGTS 70
PI+ G +++DIDG + +D VG +GH ++V A+ + GT+
Sbjct: 25 PIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTT 84
Query: 71 FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKF 124
L L +M A + V F + G+++ L+LAR + R + I
Sbjct: 85 HPRAIELSYELIDMF--APEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISL 142
Query: 125 EGCYHG-HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND----------VSAL 173
+ YHG H V + P PG T PF + L
Sbjct: 143 KQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLL 202
Query: 174 ENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231
E IAA I EPV G G I P +F +R + +G LLI DEV+TGF R
Sbjct: 203 EREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRT 262
Query: 232 AYGGAQEYFGVTPDLTTLGKIIGGG-LPVGA--YGGRRDIMEMVA----PAGPMYQAGTL 284
+GV PD+ L K I G +P+GA R I + G + T
Sbjct: 263 GSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNAR--IADAFEANADFGGAIMHGYTY 320
Query: 285 SGNPLAMTAGIHTLK 299
SG+P+A A + TL
Sbjct: 321 SGHPVACAAALATLD 335
>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 86.6 bits (215), Expect = 3e-18
Identities = 92/310 (29%), Positives = 136/310 (43%), Gaps = 46/310 (14%)
Query: 29 HMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK---GTSFGAPCLLENVLAEMV 85
H++D+ G Y+D V + ++GH ++ AA + F + E +E +
Sbjct: 578 HLFDMAGRSYLDMVNN--VTVLGHGHPRLAAAAARQWSLLNTNSRFHYAAVAE--FSERL 633
Query: 86 ISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA 144
+ P ++ V VNSG+EA +RLA A +GR ++ YHG A V+
Sbjct: 634 AALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWT-----VATDAVS 688
Query: 145 TL---------GLPD------SPGVPKGATYETLTAP--FNDVSA-LENLFENNKGEIAA 186
T PD SP +G +A DV A LE L + +G +A
Sbjct: 689 TSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRG-LAG 747
Query: 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF------ 240
I EPV GN+G IA P +L + + G + I DEV G YG YF
Sbjct: 748 FICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVG----YGRLGHYFWGFEQQ 803
Query: 241 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY-QAGTLSGNPLAMTAGIHTLK 299
GV PD+ T+ K +G G P+GA RR+I E + G + G G+P++ G+ L
Sbjct: 804 GVVPDIITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTG---GSPVSCRIGMAVLD 860
Query: 300 RLKEPGTYEY 309
L+E E
Sbjct: 861 VLREEKLQEN 870
>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 84.7 bits (210), Expect = 7e-18
Identities = 81/324 (25%), Positives = 138/324 (42%), Gaps = 42/324 (12%)
Query: 8 PVRAFKSVGGQ-PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 66
P F S+G + +V +G ++ D DG Y+D +G +G+ +++ A+ + +
Sbjct: 22 PWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQAR 81
Query: 67 KGTSFGAPCLLENV----LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR--- 118
+ + + N LA + P + V G+ A LR +
Sbjct: 82 RLPYYTPFGDMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGR 141
Query: 119 ---ERIIKFEGCYHGHADPFLVKAGSGVAT--------------LGLPDSPGVPKGATYE 161
+ II YHG +L + +G A L P+ P G +
Sbjct: 142 PAKKHIITRGDAYHGST--YLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMS-- 197
Query: 162 TLTAPFND--VSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 218
A F D V E+ + + IAA I EP++G+ G I P P + +R I +
Sbjct: 198 --EAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDI 255
Query: 219 LLIFDEVMTGF-RL-AYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVA-P 274
L I DEV+TGF RL + ++ FG+ PD+ T K + G P+GA ++++++ P
Sbjct: 256 LYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGP 315
Query: 275 AGP--MYQAG-TLSGNPLAMTAGI 295
++ G T SG+P+A A +
Sbjct: 316 NAKGNVFTHGFTYSGHPVACAAAL 339
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 84.8 bits (210), Expect = 7e-18
Identities = 79/315 (25%), Positives = 129/315 (40%), Gaps = 38/315 (12%)
Query: 21 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV 80
V S +G ++ D+DG +Y+D+ G+ +G+ V+ + E M K F +P N
Sbjct: 57 VLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAK-LPF-SPRRFTNE 113
Query: 81 ----LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 135
AE + + V F GT A L+LAR TG +++ +HG +
Sbjct: 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDA 173
Query: 136 LVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSA--------LENLFENNKGEIAA 186
+ G G+ P GV + + F D LE + E +G I A
Sbjct: 174 ISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK-EGGIGA 232
Query: 187 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 245
I E V N+ P + +R I ++ LLI DE+ G R + +G+ PD
Sbjct: 233 FIAEAV-RNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD 291
Query: 246 LTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLS-------GNPLAMTAGIHT 297
+ +GK +GGGL P+ A M+ A +S +PL A + T
Sbjct: 292 ILCIGKGLGGGLVPIAA---------MITKDK-YNTAAQISLGHYTHEKSPLGCAAALAT 341
Query: 298 LKRLKEPGTYEYLNK 312
++ +++ G E +
Sbjct: 342 IEVIEQEGLLEKVKA 356
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 84.2 bits (208), Expect = 1e-17
Identities = 88/338 (26%), Positives = 141/338 (41%), Gaps = 44/338 (13%)
Query: 19 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA----- 73
P V +G H+WD DG Y+D + +G+ + AA M++ +
Sbjct: 37 PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTT 96
Query: 74 -PCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFE 125
P ++E L+E++ S +P + NSG+EA ++R R + ++ +I
Sbjct: 97 HPAVIE--LSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRW 154
Query: 126 GCYHGHADPFLVKAGSGVATLG-----------LPDSPGVPKGATY----ETLTAPFNDV 170
YHG + LG +PD + + Y E A F
Sbjct: 155 NGYHG--------STLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRR 206
Query: 171 SAL---ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
+AL E + E +A + EP G G I P + I+RI ++ LL DEV+
Sbjct: 207 AALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIG 266
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG-TL 284
GF R A E+FG PD ++ K + G +P+G + I E + G ++ G T
Sbjct: 267 GFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTY 326
Query: 285 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGII 322
SG+P+A I LK L++ G + TG Q +
Sbjct: 327 SGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCL 364
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 83.2 bits (206), Expect = 2e-17
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 34 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FG----APCLLENVLAEMVIS 87
DG +D + SW AI G+ Q+ AA+ + + FG P + + ++V
Sbjct: 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAI--ELCRKLVAM 98
Query: 88 AVPSIEMVRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSG 142
+E V +SG+ A +++A + R+R + YHG D F G
Sbjct: 99 TPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHG--DTF------G 150
Query: 143 VATLGLPDSP--GVPKGATYETLTAP-----F------NDVSALENLFENNKGEIAAIIL 189
++ PD+ + KG E L AP F D++ L ++ EIAA+IL
Sbjct: 151 AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVIL 210
Query: 190 EPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 247
EP+V G G P++L +R++ G LLI DE+ TGF R A E+ G+ PD+
Sbjct: 211 EPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDIL 270
Query: 248 TLGKIIGGG-LPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
LGK + GG + + A R++ E ++ AG T GNPLA +L L+
Sbjct: 271 CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLES 329
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 81.5 bits (202), Expect = 8e-17
Identities = 89/320 (27%), Positives = 137/320 (42%), Gaps = 55/320 (17%)
Query: 26 KGSHMWDIDGNEYID-YVGSWGPAIIGHADDQVLAALGETMKK--------GTSFGAPCL 76
+G ++WD +GN+ +D G W + G+ ++ A M++ T+
Sbjct: 40 EGVYLWDSEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYNTFFKTTHPPAIE 98
Query: 77 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHG 130
L LAE+ A P V F NSG+EA VLR+ R + ++ II + YHG
Sbjct: 99 LAAKLAEV---APPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHG 155
Query: 131 HADPFLVKAGS----------------GVATLGLPDSPGVPKGATYETLTAPFNDVSA-- 172
V S G+ + P G T E F +A
Sbjct: 156 ST----VAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE----FGLAAARQ 207
Query: 173 LE----NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228
LE L +N +AA I EP+ G G I P + I+RI ++ LL+ DEV+ G
Sbjct: 208 LEAKILELGADN---VAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICG 264
Query: 229 F-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIME-MVAPAGPMYQAGTLS 285
F R ++FG+ PDL T+ K + G +P+GA G + E ++ G T S
Sbjct: 265 FGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYS 324
Query: 286 GNPLAMTAGIHTLKRLKEPG 305
G+P+A + L+ L++ G
Sbjct: 325 GHPVAAAVALANLRILRDEG 344
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 77.5 bits (191), Expect = 2e-15
Identities = 80/332 (24%), Positives = 131/332 (39%), Gaps = 79/332 (23%)
Query: 26 KGSHMW--DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENV--- 80
+G +W D +G Y+D V SW + GHA+ ++ + + + + LE+V
Sbjct: 35 RGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQ---------LEHVILA 85
Query: 81 ---------LAEMVISAVPS-IEMVRFVNSGTEACMGVLRLA------RAFTGRERIIKF 124
L+E ++ P + + ++G+ A L+++ R ++R +
Sbjct: 86 GFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTL 145
Query: 125 EGCYHGHA----------------DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 168
YHG P L+ + PD P+G ++E +
Sbjct: 146 TNSYHGETLAAMSVGDVALFTETYKPLLLD----TIKVPSPDCYLRPEGMSWEEHSR--R 199
Query: 169 DVSALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
+ +E + EIAA+I+EP++ G G P +L +R G LI DE+
Sbjct: 200 MFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAV 259
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQA---- 281
GF R A E G+ PD L K + GG LP+ A V +YQA
Sbjct: 260 GFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAA----------VLTTDTVYQAFYDD 309
Query: 282 -GTL---------SGNPLAMTAGIHTLKRLKE 303
TL +GNPLA A + TL ++
Sbjct: 310 YPTLRAFLHSHSYTGNPLACAAALATLDIFEQ 341
>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 77.3 bits (191), Expect = 2e-15
Identities = 78/314 (24%), Positives = 117/314 (37%), Gaps = 37/314 (11%)
Query: 16 GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-----S 70
V +G ++WD G Y+D + +GH ++ A + S
Sbjct: 32 DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS 91
Query: 71 FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIK 123
+ P +E LAE + + P + V F G+EA +LA+ + G+ ++I
Sbjct: 92 YAHPPAIE--LAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVIS 149
Query: 124 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVP---------------KGATYETLTAPFN 168
YHG A +G+ P P VP G E
Sbjct: 150 RAIAYHG--TTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAA 207
Query: 169 DVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
D +E E + +AA+ LEPV G P P + +R I LL+ DEV+
Sbjct: 208 D--RIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVIC 265
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG-TL 284
F RL E FG PD+ T K I G P+GA + E M+ G T
Sbjct: 266 AFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTF 325
Query: 285 SGNPLAMTAGIHTL 298
G+P++ + L
Sbjct: 326 GGHPVSAAVALANL 339
>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 74.0 bits (182), Expect = 2e-14
Identities = 82/314 (26%), Positives = 125/314 (39%), Gaps = 58/314 (18%)
Query: 27 GSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVI 86
G+ ++D DG Y+D + SW + GHA+ ++ AAL + + LE+ +
Sbjct: 45 GAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLD---------TLEHAMLAGCT 95
Query: 87 SAVPSIEMVR--------------FVNSGTEACMGVLRLA------RAFTGRERIIKFEG 126
P+IE+ F + G A L+++ R + +
Sbjct: 96 HE-PAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLAN 154
Query: 127 CYHGHA----------------DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 170
YHG DP L++ VA+ PD+ G G T + A +
Sbjct: 155 GYHGETIGALGVTDVALFKDAYDP-LIRHAHVVAS---PDARGARPGETAADVAA--RAL 208
Query: 171 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 229
+ + LF G+IAA+I+EP+V +G P +L +R + G LI DE+ G
Sbjct: 209 ADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGC 268
Query: 230 -RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMV---APAGPMYQAGTL 284
R A E GV PD L K I GG LP+ R I + +
Sbjct: 269 GRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSY 328
Query: 285 SGNPLAMTAGIHTL 298
+GNPLA A + TL
Sbjct: 329 TGNPLACRAALATL 342
>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 73.3 bits (181), Expect = 3e-14
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 101 GTEACMGVLRLARAFTGRERIIKFEGCYHGH--------ADPFLVKAGSGVATLGLPDSP 152
GT A L+LAR TGR I+ F +HG + + G+GV L +
Sbjct: 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHK-RQGAGVP---LNNVT 167
Query: 153 GVPKGATYETLTAP-FNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNA 208
+P Y+ + ++ LE L E++ + AA+I+E V G G ++L
Sbjct: 168 RMP----YDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQR 223
Query: 209 IRRITKENGALLIFDEVMTGFRLAYGGAQEYF-----GVTPDLTTLGKIIGG-GLP 258
+ ++ +++ LLI D++ G G +F G+TPD+ TL K I G GLP
Sbjct: 224 LAKLCRKHDILLIVDDIQAG----CGRTGTFFSFERAGITPDIVTLSKSISGYGLP 275
Score = 42.5 bits (101), Expect = 3e-04
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 5 VNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAAL 61
V S R+F P+VFD KGS ++D DG EYID+ G GH + + AL
Sbjct: 14 VRSYCRSF------PVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQAL 64
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 71.8 bits (176), Expect = 1e-13
Identities = 82/340 (24%), Positives = 143/340 (42%), Gaps = 41/340 (12%)
Query: 12 FKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALG---ETMKKG 68
+ + G + + S G + DG+ ID + SW A GH ++ AA +TM
Sbjct: 16 YAAPGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSH- 74
Query: 69 TSFGAPCLLENV-LAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT------GRER 120
FG + L +++ ++ V + +SG+ + +++A ++ R R
Sbjct: 75 VMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTR 134
Query: 121 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG----VPKGATYETLTAPF--------N 168
++ + YHG D F A + + D G + KG E + AP
Sbjct: 135 LLTWRSGYHG--DTF--------AAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQ 184
Query: 169 DVSALENLFENNKGE-IAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 226
++S E E +AAII+EP+V G G + +R + ++ LLI DE+
Sbjct: 185 EISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA 244
Query: 227 TGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQA 281
TGF R A GVTPD+ +GK + GG + A + ++++ G +
Sbjct: 245 TGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHG 304
Query: 282 GTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321
T NPLA +L+ ++ + + +I EL G+
Sbjct: 305 PTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGL 344
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 71.2 bits (175), Expect = 2e-13
Identities = 93/343 (27%), Positives = 143/343 (41%), Gaps = 52/343 (15%)
Query: 19 PIVFDSVKGSHMWDIDGNEYID-YVGSWGPAIIGHADDQVLAALGETMKK---GT---SF 71
V S KG+ + D G++ +D + G W +G+ + ++ A E M++ T F
Sbjct: 29 VTVLASAKGATLTDASGHQLLDAFAGLWC-VNVGYGQESIVEAAAEQMRELPYATGYFHF 87
Query: 72 GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRL------ARAFTGRERIIKFE 125
G+ + + A++ A S+ V F G++A +R A +++ I E
Sbjct: 88 GSEPAIR-LAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLE 146
Query: 126 GCYHGHADPFLVKAGSGVATL-------GLP-------DSPGV---PKGATYETLTAPFN 168
YHG + G+G+ L LP SP P G + + A
Sbjct: 147 RGYHGSS-----SVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAA-- 199
Query: 169 DVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
V+AL + +AA EP+ G+ G I P +L A+R +E G L + DEV+T
Sbjct: 200 SVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVIT 259
Query: 228 GF-RLAYGGAQEYFGVTPDLTTLGK-IIGGGLPVGA-------YGGRRDIMEMVAPAGPM 278
GF R A E GV PDL T+ K + G +P+GA Y G D AP G
Sbjct: 260 GFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHG 319
Query: 279 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI 321
Y T S +P++ G+ L+ E G K G+
Sbjct: 320 Y---TYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGL 359
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 68.9 bits (169), Expect = 1e-12
Identities = 88/340 (25%), Positives = 141/340 (41%), Gaps = 65/340 (19%)
Query: 10 RAFKSVGGQPIVFDSVKGSHMWDIDGNEYID-YVGSWGPAIIGHADDQVLAALGETMKKG 68
R + G P+V + +G +++D G YI+ G W A+ G ++ +++ A MKK
Sbjct: 24 RRHEEEG--PLVIERGEGIYVYDDAGKRYIEGMAGLWSVAL-GFSEQRLVEAAARQMKKL 80
Query: 69 T---SFG----APCLLENVLAEMVISAVPSIEM--VRFVNSGTEACMGVLRL------AR 113
+F P + LAE +++ P + M V F NSG+EA V++L A
Sbjct: 81 PFYHTFSHKSHGPVID---LAEKLVAMAP-VPMSKVFFTNSGSEANDTVVKLVWYYNNAL 136
Query: 114 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS--------PGV----------- 154
+++II + YHG V S T GLP++ +
Sbjct: 137 GRPEKKKIISRQRGYHG------VTIASASLT-GLPNNHRSFDLPLDRILHTGCPHYYRF 189
Query: 155 -PKGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRI 212
G + E + LE L + IAA I EPV+G G I P + I+ +
Sbjct: 190 GLPGESEEAFATRLAN--ELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAV 247
Query: 213 TKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGA-------YG 263
++ LL+ DEV+ GF R E FG+ PD+ + K + P+ A Y
Sbjct: 248 LRKYDILLVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYD 307
Query: 264 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 303
D + G + T SG+P+A + L ++E
Sbjct: 308 PIADESGKIGTFGHGF---TASGHPVAAAVALENLAIIEE 344
>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 65.4 bits (160), Expect = 2e-11
Identities = 75/299 (25%), Positives = 112/299 (37%), Gaps = 87/299 (29%)
Query: 15 VGGQPIVFDSVK--GSHMWD-IDGNEYIDYVGSWGPAIIGH------ADDQVLAALGET- 64
V G +V D + GS++ D G Y+D + + +G D + A LG
Sbjct: 21 VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAA 80
Query: 65 MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNS------------------GTEACM 106
+ K ++ S V ++EM RFV++ G A
Sbjct: 81 LNKPSN----------------SDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVE 124
Query: 107 GVLRLA-------RAFTGRE-----RIIKFEGCYHGHA---------DPFLVKAGSGVAT 145
L++A G + +++ G +HG + DP
Sbjct: 125 NALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTAR---FPK 181
Query: 146 LGLP--DSPGVPKGATYETLTAPFNDVSALENL--------FENNKGEIAAIILEPVVGN 195
P D+P + E L +V ALE FE + +IA I EP+ G
Sbjct: 182 FDWPRIDNPKLRFPLPGEDL----EEVEALEAEALAQARAAFERHPHDIACFIAEPIQGE 237
Query: 196 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG---AQEYFGVTPDLTTLGK 251
G +P+F A+R + E+ ALLIFDEV TG L G A + GV PD+ GK
Sbjct: 238 GGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLT--GTAWAYQQLGVRPDIVAFGK 294
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 64.0 bits (156), Expect = 4e-11
Identities = 73/285 (25%), Positives = 106/285 (37%), Gaps = 59/285 (20%)
Query: 15 VGGQPIVFD--SVKGSHMWD-IDGNEYIDYVGSWGPAIIGH------ADDQVLAALGE-T 64
G +V D +GS + D DG Y+D + +G D A LG
Sbjct: 14 TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAA 73
Query: 65 MKKGTSFGAPCLLENVLAEMV-----ISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 119
+ K ++ + +A V + P++ + F+ G A L+ A + R
Sbjct: 74 VNKPSN---SDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRH 130
Query: 120 ------------RIIKFEGCYHG---------HADPFLVKAGSGVATLGLP--DSPGVPK 156
+++ +HG + DP T P D P +
Sbjct: 131 NQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDP--------RKTARFPKFDWPRIDN 182
Query: 157 GATYETLTAPFND-VSALEN--------LFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 207
L AP D V ALE F +IA I EP+ G G +P+FL
Sbjct: 183 PKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLR 242
Query: 208 AIRRITKENGALLIFDEVMTGFRL-AYGGAQEYFGVTPDLTTLGK 251
A+R + E+ ALLIFDEV TG L A + GV PD+ GK
Sbjct: 243 AMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287
>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 64.3 bits (157), Expect = 4e-11
Identities = 88/329 (26%), Positives = 133/329 (40%), Gaps = 69/329 (20%)
Query: 26 KGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF------GAPCLLEN 79
+G + D G YID +G+ +V A+ E K+ + G +
Sbjct: 40 EGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASIT- 98
Query: 80 VLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFT---GR---ERIIKFEGCYHGHA 132
L++ +I P+ + V + SG++A ++L + GR ++II YHG
Sbjct: 99 -LSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHG-- 155
Query: 133 DPFLVKAGSGVAT---LGLP------DSP--------------GVPKGATYETLTAPFND 169
SGV T GL D P G + E +A
Sbjct: 156 --------SGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSA--YC 205
Query: 170 VSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 228
LE L + IAA I EPV+G G + P + AI+ + K+ LLI DEV+TG
Sbjct: 206 ADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTG 265
Query: 229 F-RL-AYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYG-------GRR--DIMEMVAPA-G 276
F RL + G+ Y G+ PDL T+ K GL AY G + D++E + G
Sbjct: 266 FGRLGSMFGSDHY-GIEPDLITVAK----GL-TSAYAPLSGSIVGEKVWDVLEQGSDEHG 319
Query: 277 PMYQAGTLSGNPLAMTAGIHTLKRLKEPG 305
+ T SG+P+ A + L L+
Sbjct: 320 AIGHGWTYSGHPICAAAALANLDILEREN 348
>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 60.5 bits (147), Expect = 8e-10
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 133 DPFLVKAGSGVATLGLP---DSPGVPKGATYETLTAPFN---DVSALENLF--------- 177
DP V +G + LP S + T+E+ F+ D + L +
Sbjct: 515 DPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLD 574
Query: 178 ----ENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 231
G IAA+I+EPV+ G G + P F A+ ++ + +IFDEV TG RL
Sbjct: 575 EYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRL 634
Query: 232 AYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--- 287
A E G PD+ K++ GGL P+ A ++ E A GP L G+
Sbjct: 635 GVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFE--AFRGPSKLDALLHGHSYT 692
Query: 288 --PLAMTAGIHTLKRLKEPGT 306
P+ A L+ K+P T
Sbjct: 693 AHPMGCAAAAKALQWYKDPST 713
>gnl|CDD|99747 cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal
phosphate (PLP)-dependent aspartate aminotransferase
superfamily (fold I). The major groups in this CD
corresponds to serine palmitoyltransferase (SPT),
5-aminolevulinate synthase (ALAS),
8-amino-7-oxononanoate synthase (AONS), and
2-amino-3-ketobutyrate CoA ligase (KBL). SPT is
responsible for the condensation of L-serine with
palmitoyl-CoA to produce 3-ketodihydrospingosine, the
reaction of the first step in sphingolipid biosynthesis.
ALAS is involved in heme biosynthesis; it catalyzes the
synthesis of 5-aminolevulinic acid from glycine and
succinyl-coenzyme A. AONS catalyses the decarboxylative
condensation of l-alanine and pimeloyl-CoA in the first
committed step of biotin biosynthesis. KBL catalyzes the
second reaction step of the metabolic degradation
pathway for threonine converting 2-amino-3-ketobutyrate,
to glycine and acetyl-CoA. The members of this CD are
widely found in all three forms of life.
Length = 349
Score = 49.9 bits (120), Expect = 1e-06
Identities = 73/349 (20%), Positives = 121/349 (34%), Gaps = 72/349 (20%)
Query: 94 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSP 152
R ++ ++ + F G+E + F Y A GV +TL
Sbjct: 37 GSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYA---------ANDGVLSTLAGKGDL 87
Query: 153 -------------GVPKGATYETLTAPFNDVSALENLFENNKGEIAA--IILEPVVGNSG 197
G+ + + + ND+ LE L + I+ E V G
Sbjct: 88 IISDSLNHASIIDGI-RLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDG 146
Query: 198 FIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVTPDLT-----TLGK 251
IAP L + + K+ GA+L DE G +G E FG D TLGK
Sbjct: 147 DIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGK 202
Query: 252 IIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGTYEY 309
G VG Y G +++++ + + T S P A + L+ L+ P E
Sbjct: 203 AFGA---VGGYIAGSKELIDYLRSYARGFIFST-SLPPAVAAAALAALEVLQGGPERRER 258
Query: 310 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN--FEDAKKSETTKFARF 367
L + L +G+ + G G + + +D K+ F
Sbjct: 259 LQENVRYLRRGLKELGFPVGGSPS--------------HIIPPLIGDDPAKAV-----AF 299
Query: 368 YRGMLEEGVYFAPSQFEAG--------FT-SLAHSSDDIQHTITAAEKV 407
+LE G+Y ++ + S AH+ +DI + A ++V
Sbjct: 300 SDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348
>gnl|CDD|223234 COG0156, BioF, 7-keto-8-aminopelargonate synthetase and related
enzymes [Coenzyme metabolism].
Length = 388
Score = 49.6 bits (119), Expect = 1e-06
Identities = 42/147 (28%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 168 NDVSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224
ND+ LE L E N I+ E V G IAP L + + ++ GALL DE
Sbjct: 153 NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDE 208
Query: 225 V-MTGFRLAYG-GAQEYFGVTPD-----LTTLGKIIGGGLPVGAY-GGRRDIMEMVAPAG 276
G G G E+FG+ P+ + TLGK +G G Y G +++ +
Sbjct: 209 AHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS---SGGYIAGSAALIDYLRNRA 265
Query: 277 PMYQAGTLSGNPLAMTAGIHTLKRLKE 303
+ T + P A + L+ L+E
Sbjct: 266 RPFIFST-ALPPAVAAAALAALRILEE 291
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. This enzyme is a class III
pyridoxal-phosphate-dependent aminotransferase. This
model describes known eukaryotic examples of the enzyme.
The degree of sequence difference between this set and
known bacterial examples is greater than the distance
between either set the most similar enzyme with distinct
function, and so separate models are built for
prokaryotic and eukaryotic sets. Alternate names include
GABA transaminase, gamma-amino-N-butyrate transaminase,
and beta-alanine--oxoglutarate aminotransferase [Central
intermediary metabolism, Other].
Length = 464
Score = 48.3 bits (115), Expect = 5e-06
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 174 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 233
E+L + +AAII+EP+ G PDF +R ITK++ I DEV TG
Sbjct: 242 EDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTG----- 296
Query: 234 GG------AQEYFGVT--PDLTTLGK 251
G A E++ + PD+ T K
Sbjct: 297 VGATGKFWAHEHWNLDDPPDMVTFSK 322
>gnl|CDD|130881 TIGR01822, 2am3keto_CoA, 2-amino-3-ketobutyrate coenzyme A ligase.
This model represents a narrowly defined clade of animal
and bacterial (almost exclusively Proteobacterial)
2-amino-3-ketobutyrate--CoA ligase. This enzyme can act
in threonine catabolism. The closest homolog from
Bacillus subtilis, and sequences like it, may be
functionally equivalent but were not included in the
model because of difficulty in finding reports of
function [Energy metabolism, Amino acids and amines].
Length = 393
Score = 47.9 bits (114), Expect = 5e-06
Identities = 61/242 (25%), Positives = 98/242 (40%), Gaps = 62/242 (25%)
Query: 197 GFIAPKPDFLNAIRRITKENGALLIFDEV-MTGFRLAYG-GAQEYFGVTPDLT----TLG 250
G IAP L+ I + + AL++ DE TGF G G+ E GV + TLG
Sbjct: 184 GVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLG 239
Query: 251 KIIGGGLPVGAY-GGRRDIMEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT-Y 307
K +GG G + R++++E++ + P + +L P + A I L+ L+
Sbjct: 240 KALGGAS--GGFTTARKEVVELLRQRSRPYLFSNSLP--PAVVGASIKVLEMLEASNELR 295
Query: 308 EYLNKITGELTQGIIDAG---KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 364
+ L T + + AG K A H I PV + DA ++
Sbjct: 296 DRLWANTRYFRERMEAAGFDIKPADHPII---------------PVMLY-DAVLAQ---- 335
Query: 365 ARFYRGMLEEGVYFAPSQFEAGF---------------TSLAHSSDDIQHTITAAEKVLR 409
RF R +LEEG+Y GF S AH+ + + + A ++ R
Sbjct: 336 -RFARRLLEEGIYV------TGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGR 388
Query: 410 QI 411
++
Sbjct: 389 EL 390
>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold
type I) of pyridoxal phosphate (PLP)-dependent enzymes.
PLP combines with an alpha-amino acid to form a compound
called a Schiff base or aldimine intermediate, which
depending on the reaction, is the substrate in four
kinds of reactions (1) transamination (movement of amino
groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
Structure and sequence analysis has revealed that the
PLP dependent enzymes can be classified into four major
groups of different evolutionary origin: aspartate
aminotransferase superfamily (fold type I), tryptophan
synthase beta superfamily (fold type II), alanine
racemase superfamily (fold type III), and D-amino acid
superfamily (fold type IV) and Glycogen phophorylase
family (fold type V).
Length = 170
Score = 45.8 bits (109), Expect = 7e-06
Identities = 37/152 (24%), Positives = 49/152 (32%), Gaps = 20/152 (13%)
Query: 90 PSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 149
P + FV SGT A L + +I + AG
Sbjct: 15 PGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAG--------A 64
Query: 150 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 209
VP DV+ LE L K +A I++ P + G + P L I
Sbjct: 65 KPVPVPVDDAGY----GGLDVAILEEL--KAKPNVALIVITPNTTSGGVLVP----LKEI 114
Query: 210 RRITKENGALLIFDEVMTGFRLAYGGAQEYFG 241
R+I KE G LL+ D G G G
Sbjct: 115 RKIAKEYGILLLVDAASAGGASPAPGVLIPEG 146
>gnl|CDD|235893 PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase;
Provisional.
Length = 397
Score = 47.1 bits (113), Expect = 1e-05
Identities = 67/243 (27%), Positives = 96/243 (39%), Gaps = 66/243 (27%)
Query: 197 GFIAPKPDFLNAIRRITKENGALLIFDEV-MTGFRLAYG-GAQEYFGVTP--DLT--TLG 250
G IAP L I + + AL++ D+ GF G G E+FGV D+ TLG
Sbjct: 188 GDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLG 243
Query: 251 KIIGGGLPVGAY-GGRRDIMEMVAPAGPMYQAGTLSGNPLA---MTAGIHTLKRLKEPGT 306
K +GG G Y GR+++++ + Y L N LA + A I L+ L+E
Sbjct: 244 KALGGA--SGGYTAGRKEVIDWLRQRSRPY----LFSNSLAPAIVAASIKVLELLEESDE 297
Query: 307 Y-EYLNKITGELTQGIIDAG---KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 362
+ L + +G+ AG H I I M G DAK +
Sbjct: 298 LRDRLWENARYFREGMTAAGFTLGPGEHPI----IPVMLG------------DAKLA--- 338
Query: 363 KFARFYRGMLEEGVYFAPSQFEAGFT---------------SLAHSSDDIQHTITAAEKV 407
F +LEEGVY GF+ S AH+ + + I A EKV
Sbjct: 339 --QEFADRLLEEGVYVI------GFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKV 390
Query: 408 LRQ 410
++
Sbjct: 391 GKE 393
>gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase.
7-keto-8-aminopelargonic acid synthetase is an alternate
name. This model represents 8-amino-7-oxononanoate
synthase, the BioF protein of biotin biosynthesis. This
model is based on a careful phylogenetic analysis to
separate members of this family from
2-amino-3-ketobutyrate and other related pyridoxal
phosphate-dependent enzymes. In several species,
including Staphylococcus and Coxiella, a candidate
8-amino-7-oxononanoate synthase is confirmed by location
in the midst of a biotin biosynthesis operon but scores
below the trusted cutoff of this model [Biosynthesis of
cofactors, prosthetic groups, and carriers, Biotin].
Length = 360
Score = 43.8 bits (104), Expect = 1e-04
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 15/105 (14%)
Query: 166 PFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224
NDV LE L E N+GE +I+ + V G IAP L + + + GA L+ D+
Sbjct: 128 RHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDD 183
Query: 225 VM-TGFRLAYG-GAQEYFGVTPD-----LTTLGKIIGGGLPVGAY 262
TG G G E+FG+ P+ + TL K +G GAY
Sbjct: 184 AHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAY 225
>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II.
Length = 357
Score = 42.7 bits (101), Expect = 2e-04
Identities = 46/253 (18%), Positives = 77/253 (30%), Gaps = 40/253 (15%)
Query: 168 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 227
D ALE + ++ +G +A + L + + KE+ LL+ DE
Sbjct: 127 LDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEE-LEKLLDLAKEHNILLLVDEAYA 185
Query: 228 GFRLAYGGAQEY---FGVTPD-----LTTLGKIIG-GGLPVGAYGGRRDIME-MVAPAGP 277
GF +G + + + K G G VG G ++ + A P
Sbjct: 186 GF--VFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKLARP 243
Query: 278 MYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 336
Y + A A L E + + + L G+ AG
Sbjct: 244 FY--SSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAAGLS-----VLPS 296
Query: 337 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVY-FAPSQFEAG----FTSL 390
+G F T + +LEE GVY S F T
Sbjct: 297 QAGF--FLLTGLDPEAALA-----------LAQVLLEEVGVYVTPGSSFGGPGWLRITVA 343
Query: 391 AHSSDDIQHTITA 403
+ ++++ + A
Sbjct: 344 GGTEEELEELLEA 356
>gnl|CDD|178417 PLN02822, PLN02822, serine palmitoyltransferase.
Length = 481
Score = 32.0 bits (73), Expect = 0.58
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 13/87 (14%)
Query: 168 NDVSALENLFEN-NKGEIAA------IILEPVVGNSGFIAPKPDFLNAIRRITKENGALL 220
ND+ +L N E I++E + NSG IAP L+ I R+ ++ +
Sbjct: 223 NDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRV 278
Query: 221 IFDEVMT-GFRLAYG-GAQEYFGVTPD 245
+ DE + G G G E+FGV +
Sbjct: 279 LLDESNSFGVLGKSGRGLSEHFGVPIE 305
>gnl|CDD|216367 pfam01212, Beta_elim_lyase, Beta-eliminating lyase.
Length = 288
Score = 31.0 bits (71), Expect = 0.90
Identities = 40/149 (26%), Positives = 53/149 (35%), Gaps = 29/149 (19%)
Query: 169 DVSALENLFE----NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224
D+ LE + I LE ++G + L IR I +E+G L D
Sbjct: 110 DLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIAREHGIPLHLD- 168
Query: 225 VMTGFRLAYGGAQEYFGVTP-------DLTTLGKIIGGGLPVGAY-GGRRD-IMEMVAP- 274
G RLA A GV D ++ G G PVG+ G D I
Sbjct: 169 ---GARLAN--AAVALGVIVKEITSYADSVSMSLSKGLGAPVGSVLAGSDDFIAYARRQR 223
Query: 275 ---AGPMYQAGTLSGNPLAMTAGIHTLKR 300
G M QAG L+ AG+ L+
Sbjct: 224 KYLGGGMRQAGVLA------AAGLRALEE 246
>gnl|CDD|99734 cd00609, AAT_like, Aspartate aminotransferase family. This family
belongs to pyridoxal phosphate (PLP)-dependent aspartate
aminotransferase superfamily (fold I). Pyridoxal
phosphate combines with an alpha-amino acid to form a
compound called a Schiff base or aldimine intermediate,
which depending on the reaction, is the substrate in
four kinds of reactions (1) transamination (movement of
amino groups), (2) racemization (redistribution of
enantiomers), (3) decarboxylation (removing COOH
groups), and (4) various side-chain reactions depending
on the enzyme involved. Pyridoxal phosphate (PLP)
dependent enzymes were previously classified into alpha,
beta and gamma classes, based on the chemical
characteristics (carbon atom involved) of the reaction
they catalyzed. The availability of several structures
allowed a comprehensive analysis of the evolutionary
classification of PLP dependent enzymes, and it was
found that the functional classification did not always
agree with the evolutionary history of these enzymes.
The major groups in this CD corresponds to Aspartate
aminotransferase a, b and c, Tyrosine, Alanine,
Aromatic-amino-acid, Glutamine phenylpyruvate,
1-Aminocyclopropane-1-carboxylate synthase,
Histidinol-phosphate, gene products of malY and cobC,
Valine-pyruvate aminotransferase and Rhizopine
catabolism regulatory protein.
Length = 350
Score = 30.4 bits (69), Expect = 1.6
Identities = 31/167 (18%), Positives = 51/167 (30%), Gaps = 30/167 (17%)
Query: 157 GATYET--LTAPFNDVSALENLFENNKGEIAAIILEPVVGNS-----GFIAPKPDFLNAI 209
GA L + LE L + + L N+ G + + + L +
Sbjct: 104 GAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYL-----NNPNNPTGAVLSE-EELEEL 157
Query: 210 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD-------LTTLGKIIG-GGLPVG- 260
+ K++G L+I DE Y G D L + K G GL +G
Sbjct: 158 AELAKKHGILIISDEAYAEL--VYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGY 215
Query: 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 307
+++E + T SG A L + +
Sbjct: 216 LIAPPEELLERLK----KLLPYTTSGPSTLSQAAAAAA--LDDGEEH 256
>gnl|CDD|235655 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.
Length = 385
Score = 29.7 bits (68), Expect = 2.7
Identities = 34/112 (30%), Positives = 46/112 (41%), Gaps = 28/112 (25%)
Query: 165 APFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 224
P NDV ALE L + A I+ E V G +AP L + + + +GA L+ DE
Sbjct: 150 YPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDE 205
Query: 225 VMTGFRLAYG---------GAQEYFGVT--PD---LTTLGKIIGGGLPVGAY 262
A+G G G+ PD + TLGK +G GA
Sbjct: 206 -------AHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGS---SGAA 247
>gnl|CDD|235749 PRK06225, PRK06225, aspartate aminotransferase; Provisional.
Length = 380
Score = 29.7 bits (67), Expect = 2.8
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 206 LNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD----LTTLGKIIG-GGLPVG 260
+ I ++N A L+ D F + A EY P+ + KI G GL +G
Sbjct: 179 IKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEY---APEHTVTSYSFSKIFGMAGLRIG 235
Query: 261 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 299
A D++E+V L N +A A I LK
Sbjct: 236 AVVATPDLIEVVK----SIVINDLGTNVIAQEAAIAGLK 270
>gnl|CDD|130046 TIGR00973, leuA_bact, 2-isopropylmalate synthase, bacterial type.
This is the first enzyme of leucine biosynthesis. A
larger family of homologous proteins includes
homocitrate synthase, distinct lineages of
2-isopropylmalate synthase, several distinct,
uncharacterized, orthologous sets in the Archaea, and
other related enzymes. This model describes a family of
2-isopropylmalate synthases found primarily in Bacteria.
The homologous families in the Archaea may represent
isozymes and/or related enzymes [Amino acid
biosynthesis, Pyruvate family].
Length = 494
Score = 29.7 bits (67), Expect = 3.1
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 1/77 (1%)
Query: 287 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 346
N A +GIH LK TYE ++ LT + GK +G + + GF
Sbjct: 288 NAFAHESGIHQDGVLKNKETYEIMSPEDIGLTAEQLVLGKHSGRHAFKDRLEEL-GFKLD 346
Query: 347 EGPVYNFEDAKKSETTK 363
+ + + K K
Sbjct: 347 DEELDKLFEKFKELADK 363
>gnl|CDD|183085 PRK11316, PRK11316, bifunctional heptose 7-phosphate kinase/heptose
1-phosphate adenyltransferase; Provisional.
Length = 473
Score = 29.4 bits (67), Expect = 3.8
Identities = 29/98 (29%), Positives = 40/98 (40%), Gaps = 22/98 (22%)
Query: 53 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVI-----SAVPSIEMVRFVNSGTEACMG 107
A D V++ L + G S C L N A +V+ S V IE+ + E G
Sbjct: 262 AGDTVISVLAAALAAGNSLEEACALANAAAGVVVGKLGTSTVSPIELENALRGRAETGFG 321
Query: 108 VL---------RLARAFTGR-ERIIKFEGCY---H-GH 131
V+ ARA R E+I+ GC+ H GH
Sbjct: 322 VMSEEQLKLAVAQARA---RGEKIVMTNGCFDILHAGH 356
>gnl|CDD|234060 TIGR02919, TIGR02919, accessory Sec system glycosyltransferase
GtfB. Members of this protein family are found only in
Gram-positive bacteria of the Firmicutes lineage,
including several species of Staphylococcus,
Streptococcus, and Lactobacillus [Protein fate, Protein
modification and repair].
Length = 438
Score = 29.2 bits (66), Expect = 4.7
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 1 MPGGVNSPVR---AFKSVGGQPIVFDSVKGSHMWDIDGN 36
+P V SP R ++ G+P+ F+ V W+I GN
Sbjct: 37 LPDDVLSPYRFFTGYEDTNGKPLYFNEVPVPDFWEIKGN 75
>gnl|CDD|145542 pfam02456, Adeno_IVa2, Adenovirus IVa2 protein. IVa2 protein can
interact with the adenoviral packaging signal and that
this interaction involves DNA sequences that have
previously been demonstrated to be required for
packaging. During the course of lytic infection, the
adenovirus major late promoter (MLP) is induced to high
levels after replication of viral DNA has started. IVa2
is a transcriptional activator of the major late
promoter.
Length = 370
Score = 28.5 bits (64), Expect = 7.5
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 159 TYETLTAPFN-DVSALENLFEN--NKGEIAAIILE 190
TYE T+P N DV+ N+F G IA I+ E
Sbjct: 170 TYEDATSPENLDVNHPNNIFVQAAKNGPIAIIMDE 204
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.319 0.139 0.414
Gapped
Lambda K H
0.267 0.0698 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 22,051,205
Number of extensions: 2257762
Number of successful extensions: 2316
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2045
Number of HSP's successfully gapped: 142
Length of query: 411
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 312
Effective length of database: 6,546,556
Effective search space: 2042525472
Effective search space used: 2042525472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.0 bits)