BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015234
(411 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G S ++D W + + E+ + G+QP CG S ++ + ++R +++ P P
Sbjct: 197 MAPEAI---MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE-MIRNRQVLPCP 252
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDI 87
P V +++ C+ RP DI
Sbjct: 253 DDCPAWVYALMIECWNEFPSRRPRFKDI 280
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G S ++D W + + E+ + G+QP CG S ++ + ++R +++ P P
Sbjct: 214 MAPEAI---MYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE-MIRNRQVLPCP 269
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDI 87
P V +++ C+ RP DI
Sbjct: 270 DDCPAWVYALMIECWNEFPSRRPRFKDI 297
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 259
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 260 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 291
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 261 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 252
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 253 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 284
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 260
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 261 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 292
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 234
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 235 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 266
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 237
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 238 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVR---RQEIP 56
MAPE + + + P SF++D + F + E++TG P + D+I V R ++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS 232
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P A++ ++ C + RPL IL
Sbjct: 233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQIL 264
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIP 59
MAPE + + P SF++D + + + E++TG P + D+I V R P +
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLS 260
Query: 60 ---SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNSV 98
P A++ ++ C + RPL IL + Q+S+
Sbjct: 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE S ++D W F + E+ T G+ P G + ++YD + + +
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ- 252
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 93
P G PP V ++ C+++ RP + + F++
Sbjct: 253 PEGCPPKVYELMRACWKWSPADRPSFAETHQAFET 287
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 38/96 (39%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
+APE Q + D W FA + E++T P S EI V P IP
Sbjct: 175 VAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPP 234
Query: 61 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 96
G+ P V + C D RP I+ + + Q+
Sbjct: 235 GISPHVSKLXKICXNEDPAKRPKFDXIVPILEKXQD 270
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQ---EIP 56
MAPE + + P SF++D + F + E++TG P + D+I + V R ++
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P ++ ++ C + RP IL
Sbjct: 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQ---EIP 56
MAPE + + P SF++D + F + E++TG P + D+I + V R ++
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P ++ ++ C + RP IL
Sbjct: 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQ---EIP 56
MAPE + + P SF++D + F + E++TG P + D+I + V R ++
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 236
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ S P ++ ++ C + RP IL
Sbjct: 237 KVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 268
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPI 58
MAPE RG D W C+IIEM TG P G ++ + + P I
Sbjct: 176 MAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEI 233
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + + +L CFE D R D+L
Sbjct: 234 PESMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 393 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 451
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 452 CWQWNPSDRPSFAEIHQAFETMFQESSISD 481
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQP--RCGRSVDEIYDAVVRRQEIPPI 58
MAPE RG D W C+IIEM TG P G ++ + + P I
Sbjct: 190 MAPEIIDKGPRG-YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH-PEI 247
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + + +L CFE D R D+L
Sbjct: 248 PESMSAEAKAFILKCFEPDPDKRACANDLL 277
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 186 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 242
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDRP 264
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 1 MAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 56
M P +W P + + E+D W F + E+ T G QP S E D + + +E+
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 251
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 87
P PP V ++ GC++ + + R + D+
Sbjct: 252 R-PRACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 435 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 493
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 494 CWQWNPSDRPSFAEIHQAFET 514
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S +D+W F ++ EM T G +P G + +I + + E P P P + NV++
Sbjct: 195 FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ 254
Query: 73 CFEYDLRSRP 82
C+ + RP
Sbjct: 255 CWAHKPEDRP 264
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 182 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 1 MAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 56
M P +W P + + E+D W F + E+ T G QP S E D + + +E+
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 280
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 87
P PP V ++ GC++ + + R + D+
Sbjct: 281 R-PRACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 454
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 455 CWQWNPSDRPSFAEIHQAFETMFQESSISD 484
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 1 MAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 56
M P +W P + + E+D W F + E+ T G QP S E D + + +E+
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 257
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDI 87
P PP V ++ GC++ + + R + D+
Sbjct: 258 R-PRACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 253 CWQWNPSDRPSFAEIHQAFETMFQESSISD 282
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 249
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 250 CWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 249
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 250 CWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 249
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 250 CWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 192 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 248
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 249 CWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 253 CWQWNPSDRPSFAEIHQAFETMFQESSISD 282
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 248 CWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 182 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 182 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 238
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 260
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 261 CWQWNPSDRPSFAEIHQAFETMFQESSISD 290
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 248
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 249 CWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 39/96 (40%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
+APE Q + D W FA + E++T P S EI V P IP
Sbjct: 175 VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPP 234
Query: 61 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 96
G+ P V ++ C D RP I+ + + Q+
Sbjct: 235 GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G ++Y+ + + + P G P V ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRA 245
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSDGG 103
C++++ RP +I + F++ Q S SD G
Sbjct: 246 CWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
APE + S +D+W F ++ EM T G +P G + +I + + E P P
Sbjct: 192 APESLKTRT---FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPE 248
Query: 61 GLPPAVENVLLGCFEYDLRSRP 82
P + NV++ C+ + RP
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDRP 270
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFET 268
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 251
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 252 CWQWNPSDRPSFAEIHQAFET 272
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 247
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 248 CWQWNPSDRPSFAEIHQAFET 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPI 58
MAPE E + + D++ FA + +LTG P S +I + ++R + + P I
Sbjct: 193 MAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89
P PP + NV+ C+ D + RP + I++
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G + ++Y+ + + + P G P V ++
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRA 252
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C++++ RP +I + F++
Sbjct: 253 CWQWNPSDRPSFAEIHQAFET 273
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPI 58
MAPE E + + D++ FA + +LTG P S +I + ++R + + P I
Sbjct: 193 MAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89
P PP + NV+ C+ D + RP + I++
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEI-YDAVVRRQEI-PPI 58
MAPE E + + D++ FA + +LTG P S +I + ++R + + P I
Sbjct: 193 MAPETIGAEEES-YTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTI 251
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89
P PP + NV+ C+ D + RP + I++
Sbjct: 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE + + S +D W + + E+LTG P G + V + PIPS
Sbjct: 181 MAPEVIRASM---FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Query: 61 GLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P ++ C+ D SRP T+IL
Sbjct: 238 TCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + P D W + EML G+ P R+ E+YD ++ + P
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------P 255
Query: 60 SGLPPAVEN----VLLGCFEYDLRSR 81
L P + N +L G + D R
Sbjct: 256 LQLKPNITNSARHLLEGLLQKDRTKR 281
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G ++Y+ + + + P G P V ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRA 245
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 246 CWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E+ T G+ P G ++Y+ + + + P G P V ++
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMER-PEGCPEKVYELMRA 245
Query: 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSD 101
C++++ RP +I + F++ Q S SD
Sbjct: 246 CWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 196 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 254
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 255 DPSRRPRFTEL 265
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 198 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 256
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 257 DPSRRPRFTEL 267
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 195 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 253
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 254 DPSRRPRFTEL 264
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 221 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 279
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 280 DPSRRPRFTEL 290
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 251
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 252 DPSRRPRFTEL 262
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 251
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 252 DPSRRPRFTEL 262
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 1 MAPEQWQPE---VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP 56
M P +W P + + E+D W F + E+ T G QP S E+ + + + + +
Sbjct: 196 MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLE 255
Query: 57 PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVFKS 93
P P V +V+LGC++ + + R + +I ++ +
Sbjct: 256 R-PRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHA 291
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 248
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 249 DPSRRPRFTEL 259
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 251
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 252 DPSRRPRFTEL 262
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 193 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 251
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 252 DPSRRPRFTEL 262
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 12 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 70
G + ++D W F ++E++T G P G S E+ A+ R +P P P + N++
Sbjct: 360 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIM 418
Query: 71 LGCFEYDLRSRPLMTDILRVFKSSQNSVHS 100
+ C++ RP I V + S
Sbjct: 419 MRCWKNRPEERPTFEYIQSVLDDFYTATES 448
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 12 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 70
G + ++D W F ++E++T G P G S E+ A+ R +P P P + N++
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIM 402
Query: 71 LGCFEYDLRSRPLMTDILRVFKSSQNSVHS 100
+ C++ RP I V + S
Sbjct: 403 MRCWKNRPEERPTFEYIQSVLDDFYTATES 432
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 631
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 632 DPSRRPRFTEL 642
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E+L GV+P G +++ + + +P +P PP + +++ C+ Y
Sbjct: 573 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAY 631
Query: 77 DLRSRPLMTDI 87
D RP T++
Sbjct: 632 DPSRRPRFTEL 642
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.0 bits (79), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 178 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 235
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 236 KHINPVAASLIQKMLQTDPTARPTINELL 264
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 237
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 184 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 241
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 242 KHINPVAASLIQKMLQTDPTARPTINELL 270
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 202 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 259
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 260 KHINPVAASLIQKMLQTDPTARPTINELL 288
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 180 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 237
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + IP
Sbjct: 204 TPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--SIP 261
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P +++ + D +RP + ++L
Sbjct: 262 KHINPVAASLIQKMLQTDPTARPTINELL 290
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 12 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 70
G + ++D W F ++E++T G P G S E+ A+ R +P P P + N++
Sbjct: 187 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIM 245
Query: 71 LGCFEYDLRSRPLMTDILRVF 91
+ C++ RP I V
Sbjct: 246 MRCWKNRPEERPTFEYIQSVL 266
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S D + VR IPP
Sbjct: 186 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSAR 242
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D+W + + E+++ G +P S ++ +A+ + +PP P P ++ ++L C++
Sbjct: 202 SDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-PPDCPTSLHQLMLDCWQK 260
Query: 77 DLRSRP 82
D +RP
Sbjct: 261 DRNARP 266
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D+W + + E+++ G +P S ++ +A+ + +PP P P ++ ++L C++
Sbjct: 204 SDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPP-PPDCPTSLHQLMLDCWQK 262
Query: 77 DLRSRP 82
D +RP
Sbjct: 263 DRNARP 268
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E++T G P G + E+ + V R +P
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP-C 227
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C++ D RP
Sbjct: 228 PQDCPISLHELMIHCWKKDPEERP 251
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 289
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 290 DRNNRPKFEQIVSIL 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 287
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 288 DRNNRPKFEQIVSIL 302
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 260
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 261 DRNNRPKFEQIVSIL 275
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 260
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 261 DRNNRPKFEQIVSIL 275
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ AV +PP P P A+ ++L C++
Sbjct: 219 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPP-PMDCPAALYQLMLDCWQK 277
Query: 77 DLRSRPLMTDILRVF 91
D +RP I+ +
Sbjct: 278 DRNNRPKFEQIVSIL 292
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W FA + E+L+ G QP ++ V+ + + P P PP + ++ C++Y
Sbjct: 195 SDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDY 253
Query: 77 DLRSRPLMTDIL 88
D RP T+++
Sbjct: 254 DPSDRPRFTELV 265
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P + ++ +A+ + +PP P P A+ ++L C++
Sbjct: 195 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQK 253
Query: 77 DLRSRPLMTDILRVF 91
D RP I+
Sbjct: 254 DRNHRPKFGQIVNTL 268
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 2 APEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P+ PE+ + D W F + EML G P G+ +E++ ++ R + P P
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYP 238
Query: 60 SGLPPAVENVLLGCF----------EYDLRSRPLMTDI 87
L +++L+ F D+R PL +I
Sbjct: 239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W FA + E+L+ G QP ++ V+ + + P P PP + ++ C++Y
Sbjct: 207 SDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDY 265
Query: 77 DLRSRPLMTDIL 88
D RP T+++
Sbjct: 266 DPSDRPRFTELV 277
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W FA + E+L+ G QP ++ V+ + + P P PP + ++ C++Y
Sbjct: 191 SDVWMFAVCMWEILSFGKQPFFWLENKDVI-GVLEKGDRLPKPDLCPPVLYTLMTRCWDY 249
Query: 77 DLRSRPLMTDIL 88
D RP T+++
Sbjct: 250 DPSDRPRFTELV 261
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 2 APEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P+ PE+ + D W F + EML G P G+ +E++ ++ R + P P
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI--RMDNPFYP 239
Query: 60 SGLPPAVENVLLGCF----------EYDLRSRPLMTDI 87
L +++L+ F D+R PL +I
Sbjct: 240 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 277
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P + ++ +A+ + +PP P P A+ ++L C++
Sbjct: 221 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPP-PMDCPSALHQLMLDCWQK 279
Query: 77 DLRSRPLMTDILRVF 91
D RP I+
Sbjct: 280 DRNHRPKFGQIVNTL 294
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 229
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 230 PAGCPREMYDLMNLCWTYDVENRP 253
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 345 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 403
Query: 59 PSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 91
P P ++ +++ C+ D RP + L+ F
Sbjct: 404 PPECPESLHDLMCQCWRKDPEERPTF-EYLQAF 435
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S +D W F + E+L G +P + ++ +V +P P G P A+ ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLD 289
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C+ D RP + I+ V +
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDA 310
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 231
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 232 PAGCPREMYDLMNLCWTYDVENRP 255
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 235
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 236 PAGCPREMYDLMNLCWTYDVENRP 259
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S +D W F + E+L G +P + ++ +V +P P G P A+ ++L
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA-PMGCPHALHQLMLD 289
Query: 73 CFEYDLRSRPLMTDILRVFKS 93
C+ D RP + I+ V +
Sbjct: 290 CWHKDRAQRPRFSQIVSVLDA 310
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 241
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRP 265
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
M+PE+ Q S ++D W S++EM G PR ++ E+ D +V E PP
Sbjct: 173 MSPERLQGT---HYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIV--NEPPP--- 224
Query: 61 GLPPAV 66
LP AV
Sbjct: 225 KLPSAV 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 249
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 250 PAGCPREMYDLMNLCWTYDVENRP 273
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 178 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 236
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 237 PPECPESLHDLMCQCWRKDPEERP 260
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 549 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 607
Query: 73 CFEYDLRSRP 82
C+ YD+ +RP
Sbjct: 608 CWTYDVENRP 617
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 14 ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLG 72
S ++D W F + E + G +P G E+ A++ + E P+G P + +++
Sbjct: 550 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNL 608
Query: 73 CFEYDLRSRP 82
C+ YD+ +RP
Sbjct: 609 CWTYDVENRP 618
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISF--ETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F ++D W F + E + G +P G E+ A++ + E
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGERMGC 251
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P+G P + +++ C+ YD+ +RP
Sbjct: 252 PAGCPREMYDLMNLCWTYDVENRP 275
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 169 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 227
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 228 PPECPESLHDLMCQCWRKDPEERP 251
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 32.3 bits (72), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PE--VRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE + G + ++D W F + E+ T G P G E+ D V R +P
Sbjct: 167 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 225
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P P ++ +++ C+ D RP
Sbjct: 226 PPECPESLHDLMCQCWRKDPEERP 249
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V +FE+D W + + E+ + G P G VD + +++ P
Sbjct: 237 MAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + +++ C++ D RP I+++ +
Sbjct: 294 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V +FE+D W + + E+ + G P G VD + +++ P
Sbjct: 214 MAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 270
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + +++ C++ D RP I+++ +
Sbjct: 271 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V +FE+D W + + E+ + G P G VD + +++ P
Sbjct: 237 MAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 293
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + +++ C++ D RP I+++ +
Sbjct: 294 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 326
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V +FE+D W + + E+ + G P G VD + +++ P
Sbjct: 230 MAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 286
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + +++ C++ D RP I+++ +
Sbjct: 287 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 319
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V +FE+D W + + E+ + G P G VD + +++ P
Sbjct: 232 MAPESIFNCV---YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP 288
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + +++ C++ D RP I+++ +
Sbjct: 289 EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 321
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE + E P + ++D + F + E+ T QP + ++ AV + + IP
Sbjct: 206 MAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 61 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
L P V ++ GC+ + RP I+ + +
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 196 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 251
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ + RP +I+ + K
Sbjct: 252 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 199 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 254
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ + RP +I+ + K
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 198 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 253
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ + RP +I+ + K
Sbjct: 254 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE + E P + ++D + F + E+ T QP + ++ AV + + IP
Sbjct: 206 MAPEVLRDE---PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPR 262
Query: 61 GLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
L P V ++ GC+ + RP I+ + +
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 199 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 254
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ + RP +I+ + K
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 199 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 254
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ + RP +I+ + K
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.6 bits (70), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 14/107 (13%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE + +VRG F+ D W F + IE+ TG P ++ + + + P + +
Sbjct: 193 MAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLET 249
Query: 61 GLP---------PAVENVLLGCFEYDLRSRPLMTDILR--VFKSSQN 96
G+ + ++ C + D RP ++LR F+ ++N
Sbjct: 250 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W F + E++T G +P S E+ A+ +P P P A+ +++ C++
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLP-TPMDCPSAIYQLMMQCWQQ 289
Query: 77 DLRSRPLMTDILRVF 91
+ RP DI+ +
Sbjct: 290 ERARRPKFADIVSIL 304
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 57
+APE Q + GP D W + EML G P + D++++A++ + + P
Sbjct: 191 IAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 200 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 255
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ RP +I+ + K
Sbjct: 256 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 199 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 254
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ RP +I+ + K
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE + G + +D W F + E+ + QP G S +++ V+ + P
Sbjct: 199 MAPESLKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQ-P 254
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P V +++ C++++ RP +I+ + K
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 2 APEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV 50
APE + PEV +S TD W + +L+G+ P + +I + ++
Sbjct: 166 APEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE ++ S ++D W + + E+ + G P G +DE + + +R P
Sbjct: 268 MAPESIFDKI---YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAP 324
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + ++L C+ D + RP +++
Sbjct: 325 EYSTPEIYQIMLDCWHRDPKERPRFAELV 353
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S + VR IPP
Sbjct: 203 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 259
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 260 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 298
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 225
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 225
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE + +VRG F+ D W F + IE+ TG P ++ + + + P + +
Sbjct: 188 MAPEVME-QVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMKVL-MLTLQNDPPSLET 244
Query: 61 GLP---------PAVENVLLGCFEYDLRSRPLMTDILR 89
G+ + ++ C + D RP ++LR
Sbjct: 245 GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 225
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 225
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S + VR IPP
Sbjct: 186 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S + VR IPP
Sbjct: 186 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 228
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 229 RTLSPEAKSLLAGLLKKDPKQR 250
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S + VR IPP
Sbjct: 186 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 7/74 (9%)
Query: 2 APEQWQPEV-------RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE 54
P+ PE+ +G E D W + EML G P S+ E Y ++ +E
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE 298
Query: 55 IPPIPSGLPPAVEN 68
P+ + EN
Sbjct: 299 RFQFPTQVTDVSEN 312
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 230
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 231 RTLSPEAKSLLAGLLKKDPKQR 252
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + + +++ ++ E P
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL--MEEIRFP 225
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 226 RTLSPEAKSLLAGLLKKDPKQR 247
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP- 59
++PEQ + + + +D + C + E+LTG P G S + VR IPP
Sbjct: 186 LSPEQARGD---SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSAR 242
Query: 60 -SGLPPAVENVLLGCFEYDLRSR-----PLMTDILRVFK 92
GL ++ V+L + +R + D++RV
Sbjct: 243 HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 2 APEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 57
P+ PE+ P D W F + EML G P G DE++ +++ P
Sbjct: 184 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVP 262
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P ++ D RP + ++L
Sbjct: 263 RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVP 262
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P ++ D RP + ++L
Sbjct: 263 RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + +P
Sbjct: 205 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVP 262
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P ++ D RP + ++L
Sbjct: 263 RHINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + +++++ ++ E P
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFP 369
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 370 RTLGPEAKSLLSGLLKKDPKQR 391
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + +++++ ++ E P
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFP 372
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 373 RTLGPEAKSLLSGLLKKDPKQR 394
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 56 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 91
PP+ LP +E+++ C+ D RP M +I+++
Sbjct: 224 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 2 APEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
P PEV + SFE D W C + +L G P + E Y + + + +P
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVP 246
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
+ P ++ D RP + ++L
Sbjct: 247 RHINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 56 PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRVF 91
PP+ LP +E+++ C+ D RP M +I+++
Sbjct: 223 PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + +++++ ++ E P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFP 230
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 231 RTLGPEAKSLLSGLLKKDPKQR 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + +++++ ++ E P
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL--MEEIRFP 229
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 230 RTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 2 APEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP 57
P+ PE+ P D W F + EML G P G DE++ +++ P
Sbjct: 505 TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 562
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 2 APEQWQPEVRGPISF--ETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP 59
PE PEV + D WG + EM+ G P + +++++ ++ +EI P
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL-MEEI-RFP 231
Query: 60 SGLPPAVENVLLGCFEYDLRSR 81
L P +++L G + D + R
Sbjct: 232 RTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 200 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 258
Query: 77 DLRSRPLMTDILRVF 91
+ RP I+ +
Sbjct: 259 ERSDRPKFGQIVNML 273
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 16 FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 75
F+ D W ++ + TG+ P G ++ ++++ + + IP P + ++L G E
Sbjct: 192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA--IPGDCGPPLSDLLKGMLE 249
Query: 76 YDLRSR 81
Y+ R
Sbjct: 250 YEPAKR 255
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 194 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 252
Query: 77 DLRSRPLMTDILRVF 91
+ RP I+ +
Sbjct: 253 ERSDRPKFGQIVNML 267
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 213 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAP 269
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 270 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F T D W F + E+ + G P + ++ V + ++
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA- 407
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P G PPAV +V+ C+ D +RP
Sbjct: 408 PDGCPPAVYDVMKNCWHLDAATRP 431
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P S ++ A+ +PP P P A+ ++L C++
Sbjct: 215 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPP-PMDCPIALHQLMLDCWQK 273
Query: 77 DLRSRPLMTDILRVF 91
+ RP I+ +
Sbjct: 274 ERSDRPKFGQIVNML 288
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 29.6 bits (65), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS 60
MAPE ++ +V +F+ D W + +LTG P G S++E+ ++ +
Sbjct: 193 MAPEVFKRDV----TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 61 G-LPPAVENVLLGCFEYDLRSRPLMTDILR 89
L P ++L D RP +L
Sbjct: 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE +F T D W F + E+ + G P + ++ V + ++
Sbjct: 168 PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA- 226
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P G PPAV V+ C+ D RP
Sbjct: 227 PDGCPPAVYEVMKNCWHLDAAMRP 250
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 208 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 2 APEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ 53
P+ PE+ P D W + + EML G P G DE++ +++
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN 236
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 12 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 70
G S E+D W F + E + G P S + + V + +P P P AV ++
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLM 348
Query: 71 LGCFEYDLRSRPLMTDILRVFKS 93
C+ Y+ RP + I + +S
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQS 371
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 12 GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVL 70
G S E+D W F + E + G P S + + V + +P P P AV ++
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLP-CPELCPDAVFRLM 348
Query: 71 LGCFEYDLRSRPLMTDILRVFKS 93
C+ Y+ RP + I + +S
Sbjct: 349 EQCWAYEPGQRPSFSTIYQELQS 371
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 18 TDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76
+D W + + E+++ G +P + ++ AV +P P P A+ ++L C++
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPS-PMDCPAALYQLMLDCWQK 266
Query: 77 DLRSRPLMTDILRVF 91
+ SRP +I+ +
Sbjct: 267 ERNSRPKFDEIVNML 281
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 208 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 208 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 262 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 318
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 319 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 347
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 260 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 316
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 317 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 345
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 217 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 208 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 264
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 265 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 213 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 269
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 270 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 298
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 269 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 325
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 326 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 354
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 254 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 310
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 311 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 267 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 323
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 324 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 352
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 217 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 28.1 bits (61), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 219 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 275
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 276 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 217 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
M+PE + G + +D W F + E+ T QP G S +++ V+ + P
Sbjct: 229 MSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-P 284
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + ++ C++Y+ + RP +I+ K
Sbjct: 285 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 217 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 28.1 bits (61), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
MAPE V + ++D W F + E+ + G P G +DE + ++ P
Sbjct: 217 MAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP 273
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDIL 88
P + +L C+ + RP ++++
Sbjct: 274 DYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
M+PE + G + +D W F + E+ T QP G S +++ V+ + P
Sbjct: 192 MSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-P 247
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + ++ C++Y+ + RP +I+ K
Sbjct: 248 DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
M+PE + G + +D W F + E+ T QP G S +++ V+ + P
Sbjct: 201 MSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-P 256
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + ++ C++Y+ + RP +I+ K
Sbjct: 257 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
M+PE + G + +D W F + E+ T QP G S +++ V+ + P
Sbjct: 194 MSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-P 249
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + ++ C++Y+ + RP +I+ K
Sbjct: 250 DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 3 PEQWQ-PEVRGPISFET--DSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPI 58
P +W PE F T D W F + E+ + G P + ++ V + ++
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDA- 220
Query: 59 PSGLPPAVENVLLGCFEYDLRSRP 82
P G PPAV V+ C+ D RP
Sbjct: 221 PDGCPPAVYEVMKNCWHLDAAMRP 244
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIP 59
M+PE + G + +D W F + E+ T QP G S +++ V+ + P
Sbjct: 194 MSPESLKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-P 249
Query: 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILRVFK 92
P + ++ C++Y+ + RP +I+ K
Sbjct: 250 DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,945,947
Number of Sequences: 62578
Number of extensions: 543418
Number of successful extensions: 1444
Number of sequences better than 100.0: 219
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 1379
Number of HSP's gapped (non-prelim): 249
length of query: 411
length of database: 14,973,337
effective HSP length: 101
effective length of query: 310
effective length of database: 8,652,959
effective search space: 2682417290
effective search space used: 2682417290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)