Query 015234
Match_columns 411
No_of_seqs 309 out of 2602
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 04:22:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015234.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015234hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0192 Tyrosine kinase specif 99.5 1.2E-13 2.6E-18 140.4 11.8 98 1-99 211-308 (362)
2 PHA02988 hypothetical protein; 99.5 6.2E-14 1.3E-18 136.1 9.3 94 1-95 187-280 (283)
3 KOG0197 Tyrosine kinases [Sign 99.5 6.2E-14 1.3E-18 144.8 8.6 92 1-96 371-463 (468)
4 KOG0605 NDR and related serine 99.5 5.1E-14 1.1E-18 145.7 7.9 107 1-119 355-466 (550)
5 KOG0694 Serine/threonine prote 99.5 4.5E-14 9.7E-19 149.5 7.1 108 1-119 535-647 (694)
6 KOG0598 Ribosomal protein S6 k 99.4 7.2E-14 1.6E-18 139.1 5.7 110 1-120 192-305 (357)
7 KOG1026 Nerve growth factor re 99.4 1.5E-13 3.3E-18 148.4 7.7 93 1-97 672-765 (774)
8 KOG4721 Serine/threonine prote 99.4 1.6E-13 3.4E-18 142.8 4.6 91 1-94 278-368 (904)
9 KOG0616 cAMP-dependent protein 99.4 3E-13 6.4E-18 131.8 5.9 112 1-119 208-320 (355)
10 KOG0610 Putative serine/threon 99.4 6.1E-13 1.3E-17 134.3 8.0 108 1-119 302-413 (459)
11 cd05048 PTKc_Ror Catalytic Dom 99.4 9.2E-13 2E-17 126.1 8.4 89 1-93 193-282 (283)
12 smart00750 KIND kinase non-cat 99.4 7.3E-13 1.6E-17 118.6 6.4 91 1-94 71-169 (176)
13 cd05102 PTKc_VEGFR3 Catalytic 99.4 1.5E-12 3.2E-17 128.8 9.0 93 1-96 243-336 (338)
14 KOG1095 Protein tyrosine kinas 99.4 3E-12 6.6E-17 142.5 11.7 94 1-98 871-965 (1025)
15 KOG0201 Serine/threonine prote 99.3 4.1E-13 8.9E-18 136.3 4.0 86 1-90 178-263 (467)
16 KOG0581 Mitogen-activated prot 99.3 1.5E-12 3.2E-17 130.0 7.7 86 1-90 244-335 (364)
17 cd05116 PTKc_Syk Catalytic dom 99.3 3.1E-12 6.8E-17 121.1 8.9 90 1-94 165-255 (257)
18 KOG0690 Serine/threonine prote 99.3 1.4E-12 3E-17 128.6 6.6 111 1-119 335-447 (516)
19 KOG0592 3-phosphoinositide-dep 99.3 3.2E-12 6.9E-17 132.7 8.9 99 1-110 254-352 (604)
20 cd05571 STKc_PKB Catalytic dom 99.3 2E-12 4.4E-17 127.7 6.4 108 1-119 162-274 (323)
21 cd05061 PTKc_InsR Catalytic do 99.3 5.8E-12 1.3E-16 121.6 9.4 100 1-104 188-288 (288)
22 KOG0575 Polo-like serine/threo 99.3 2.5E-12 5.5E-17 134.8 7.0 85 1-90 185-269 (592)
23 KOG0578 p21-activated serine/t 99.3 2.6E-12 5.7E-17 133.7 6.9 87 1-90 436-523 (550)
24 cd05052 PTKc_Abl Catalytic dom 99.3 6.8E-12 1.5E-16 119.2 9.2 90 1-94 172-262 (263)
25 cd05631 STKc_GRK4 Catalytic do 99.3 2.8E-12 6.1E-17 124.0 6.7 108 1-119 168-284 (285)
26 cd05590 STKc_nPKC_eta Catalyti 99.3 2.4E-12 5.2E-17 127.2 6.1 114 1-119 163-276 (320)
27 cd05049 PTKc_Trk Catalytic dom 99.3 6.7E-12 1.5E-16 119.8 8.8 88 1-92 191-279 (280)
28 cd05064 PTKc_EphR_A10 Catalyti 99.3 7.1E-12 1.5E-16 119.7 8.5 90 1-94 175-265 (266)
29 PTZ00263 protein kinase A cata 99.3 4.5E-12 9.7E-17 125.7 7.3 105 1-116 182-291 (329)
30 cd05612 STKc_PRKX_like Catalyt 99.3 3.9E-12 8.5E-17 123.5 6.7 108 1-119 165-277 (291)
31 cd05616 STKc_cPKC_beta Catalyt 99.3 4E-12 8.7E-17 125.5 6.9 112 1-119 168-280 (323)
32 cd05036 PTKc_ALK_LTK Catalytic 99.3 7.6E-12 1.6E-16 120.0 8.3 88 1-92 188-276 (277)
33 cd05091 PTKc_Ror2 Catalytic do 99.3 8.5E-12 1.8E-16 119.6 8.6 89 1-93 193-282 (283)
34 cd05035 PTKc_Axl_like Catalyti 99.3 1.2E-11 2.7E-16 117.1 9.5 90 1-94 182-272 (273)
35 cd05089 PTKc_Tie1 Catalytic do 99.3 1E-11 2.3E-16 120.6 9.1 94 1-98 185-279 (297)
36 KOG0696 Serine/threonine prote 99.3 4.5E-12 9.8E-17 128.1 6.5 113 1-120 517-630 (683)
37 cd05619 STKc_nPKC_theta Cataly 99.3 5.7E-12 1.2E-16 124.4 7.2 108 1-119 163-271 (316)
38 KOG0198 MEKK and related serin 99.3 1.7E-12 3.7E-17 129.4 3.4 89 1-91 188-277 (313)
39 cd05054 PTKc_VEGFR Catalytic d 99.3 1E-11 2.3E-16 123.9 9.0 93 1-96 242-335 (337)
40 KOG4257 Focal adhesion tyrosin 99.3 6E-12 1.3E-16 132.3 7.5 92 1-96 559-651 (974)
41 cd05060 PTKc_Syk_like Catalyti 99.3 1.3E-11 2.8E-16 116.7 9.2 90 1-94 165-255 (257)
42 cd05584 STKc_p70S6K Catalytic 99.3 1.3E-11 2.9E-16 121.9 9.6 108 1-119 167-279 (323)
43 cd05570 STKc_PKC Catalytic dom 99.3 5.5E-12 1.2E-16 124.3 6.9 108 1-119 163-275 (318)
44 cd05589 STKc_PKN Catalytic dom 99.3 8.9E-12 1.9E-16 123.0 8.2 108 1-119 168-280 (324)
45 cd05575 STKc_SGK Catalytic dom 99.3 9.7E-12 2.1E-16 122.7 8.4 112 1-119 163-274 (323)
46 cd05591 STKc_nPKC_epsilon Cata 99.3 5.4E-12 1.2E-16 124.4 6.5 108 1-119 163-277 (321)
47 cd05093 PTKc_TrkB Catalytic do 99.3 1.3E-11 2.8E-16 119.3 8.8 93 1-97 189-282 (288)
48 KOG1024 Receptor-like protein 99.3 8.4E-12 1.8E-16 125.5 7.7 89 1-93 465-554 (563)
49 cd05106 PTKc_CSF-1R Catalytic 99.3 1E-11 2.3E-16 125.8 8.5 92 1-95 281-373 (374)
50 cd05094 PTKc_TrkC Catalytic do 99.3 1.4E-11 3E-16 119.2 8.9 92 1-96 192-284 (291)
51 cd05072 PTKc_Lyn Catalytic dom 99.3 1.4E-11 3E-16 116.6 8.7 89 1-93 171-260 (261)
52 cd05585 STKc_YPK1_like Catalyt 99.3 6E-12 1.3E-16 123.6 6.5 108 1-119 160-270 (312)
53 cd05043 PTK_Ryk Pseudokinase d 99.3 1.3E-11 2.9E-16 118.2 8.6 92 1-96 186-278 (280)
54 cd05592 STKc_nPKC_theta_delta 99.3 8.2E-12 1.8E-16 123.1 7.3 108 1-119 163-271 (316)
55 cd05587 STKc_cPKC Catalytic do 99.3 9.4E-12 2E-16 122.9 7.7 112 1-119 168-280 (324)
56 KOG0591 NIMA (never in mitosis 99.3 7.9E-12 1.7E-16 121.4 6.9 86 1-90 195-281 (375)
57 cd05082 PTKc_Csk Catalytic dom 99.3 1.4E-11 3E-16 116.5 8.4 89 1-93 166-255 (256)
58 cd05058 PTKc_Met_Ron Catalytic 99.3 1.6E-11 3.4E-16 116.1 8.9 91 1-95 169-260 (262)
59 cd05070 PTKc_Fyn_Yrk Catalytic 99.3 1.7E-11 3.6E-16 116.2 9.0 89 1-93 170-259 (260)
60 cd05053 PTKc_FGFR Catalytic do 99.3 1.7E-11 3.6E-16 118.2 8.9 91 1-95 201-292 (293)
61 PF07714 Pkinase_Tyr: Protein 99.2 3E-12 6.5E-17 122.3 3.6 87 1-91 172-259 (259)
62 cd05607 STKc_GRK7 Catalytic do 99.2 7.6E-12 1.6E-16 120.5 6.4 111 1-117 161-275 (277)
63 cd05104 PTKc_Kit Catalytic dom 99.2 1.6E-11 3.4E-16 124.5 9.0 91 1-94 283-374 (375)
64 cd05115 PTKc_Zap-70 Catalytic 99.2 1.7E-11 3.6E-16 116.7 8.6 90 1-94 165-255 (257)
65 KOG4279 Serine/threonine prote 99.2 5.3E-12 1.1E-16 133.9 5.6 88 1-89 743-831 (1226)
66 cd05595 STKc_PKB_beta Catalyti 99.2 1E-11 2.3E-16 122.8 7.3 108 1-119 162-274 (323)
67 cd05620 STKc_nPKC_delta Cataly 99.2 9.7E-12 2.1E-16 122.6 7.0 108 1-119 163-271 (316)
68 cd05075 PTKc_Axl Catalytic dom 99.2 2E-11 4.4E-16 116.0 9.0 90 1-94 181-271 (272)
69 cd06625 STKc_MEKK3_like Cataly 99.2 1.9E-11 4.2E-16 115.3 8.7 87 1-90 174-260 (263)
70 cd05148 PTKc_Srm_Brk Catalytic 99.2 1.8E-11 3.9E-16 115.6 8.4 89 1-93 171-260 (261)
71 cd05068 PTKc_Frk_like Catalyti 99.2 2.9E-11 6.2E-16 114.6 9.8 89 1-93 171-260 (261)
72 cd05108 PTKc_EGFR Catalytic do 99.2 2.9E-11 6.2E-16 118.7 10.1 93 1-97 178-271 (316)
73 cd05090 PTKc_Ror1 Catalytic do 99.2 2.2E-11 4.8E-16 117.0 8.9 89 1-93 193-282 (283)
74 PTZ00426 cAMP-dependent protei 99.2 1E-11 2.2E-16 124.3 6.8 109 1-120 195-308 (340)
75 cd05033 PTKc_EphR Catalytic do 99.2 2.9E-11 6.4E-16 114.9 9.6 90 1-94 175-265 (266)
76 cd05092 PTKc_TrkA Catalytic do 99.2 2E-11 4.2E-16 117.5 8.4 88 1-92 191-279 (280)
77 cd05063 PTKc_EphR_A2 Catalytic 99.2 2.3E-11 5.1E-16 115.5 8.8 90 1-94 177-267 (268)
78 cd05045 PTKc_RET Catalytic dom 99.2 2.4E-11 5.1E-16 117.4 8.8 92 1-96 196-288 (290)
79 cd05593 STKc_PKB_gamma Catalyt 99.2 1.2E-11 2.5E-16 122.8 6.8 108 1-119 162-274 (328)
80 cd05114 PTKc_Tec_Rlk Catalytic 99.2 2.6E-11 5.7E-16 114.6 8.9 87 1-91 168-255 (256)
81 cd05047 PTKc_Tie Catalytic dom 99.2 2.4E-11 5.3E-16 116.1 8.6 91 1-95 178-269 (270)
82 cd05067 PTKc_Lck_Blk Catalytic 99.2 2.7E-11 5.9E-16 114.7 8.8 89 1-93 170-259 (260)
83 cd05044 PTKc_c-ros Catalytic d 99.2 2.6E-11 5.7E-16 115.0 8.6 88 1-92 180-268 (269)
84 KOG0196 Tyrosine kinase, EPH ( 99.2 4.6E-12 9.9E-17 135.9 3.7 93 1-97 801-894 (996)
85 cd05032 PTKc_InsR_like Catalyt 99.2 2.3E-11 5E-16 115.9 8.1 88 1-92 188-276 (277)
86 cd05062 PTKc_IGF-1R Catalytic 99.2 2.6E-11 5.6E-16 116.1 8.4 88 1-92 188-276 (277)
87 cd05111 PTK_HER3 Pseudokinase 99.2 3.7E-11 8E-16 115.7 9.4 92 1-96 178-270 (279)
88 cd05055 PTKc_PDGFR Catalytic d 99.2 3.2E-11 6.9E-16 117.9 9.0 91 1-94 210-301 (302)
89 KOG0200 Fibroblast/platelet-de 99.2 2.6E-11 5.6E-16 131.2 9.1 92 1-96 488-581 (609)
90 cd05040 PTKc_Ack_like Catalyti 99.2 3.5E-11 7.7E-16 113.4 8.9 89 1-92 167-256 (257)
91 cd05050 PTKc_Musk Catalytic do 99.2 3.2E-11 6.8E-16 116.2 8.3 88 1-92 199-287 (288)
92 cd08228 STKc_Nek6 Catalytic do 99.2 3.6E-11 7.8E-16 114.0 8.5 90 1-94 173-265 (267)
93 cd05069 PTKc_Yes Catalytic dom 99.2 3.7E-11 8E-16 114.0 8.5 89 1-93 170-259 (260)
94 cd05109 PTKc_HER2 Catalytic do 99.2 4.2E-11 9E-16 114.8 8.9 92 1-96 178-270 (279)
95 cd05056 PTKc_FAK Catalytic dom 99.2 5.2E-11 1.1E-15 113.4 9.5 92 1-96 175-267 (270)
96 cd00192 PTKc Catalytic domain 99.2 3.5E-11 7.6E-16 112.5 8.2 87 1-91 174-261 (262)
97 cd05605 STKc_GRK4_like Catalyt 99.2 2E-11 4.4E-16 118.0 6.7 109 1-118 168-283 (285)
98 cd05602 STKc_SGK1 Catalytic do 99.2 1.4E-11 3.1E-16 121.7 5.7 112 1-119 163-274 (325)
99 cd05608 STKc_GRK1 Catalytic do 99.2 2.2E-11 4.7E-16 117.5 6.7 107 1-118 164-279 (280)
100 KOG0193 Serine/threonine prote 99.2 9.6E-12 2.1E-16 130.5 4.4 96 1-96 557-655 (678)
101 KOG0986 G protein-coupled rece 99.2 1.1E-11 2.4E-16 126.5 4.7 128 1-137 353-486 (591)
102 cd05098 PTKc_FGFR1 Catalytic d 99.2 4.4E-11 9.5E-16 116.8 8.7 93 1-97 209-302 (307)
103 cd05084 PTKc_Fes Catalytic dom 99.2 4.2E-11 9.1E-16 112.7 8.3 88 1-92 163-251 (252)
104 cd08529 STKc_FA2-like Catalyti 99.2 4.2E-11 9E-16 112.4 8.1 86 1-90 168-253 (256)
105 cd05615 STKc_cPKC_alpha Cataly 99.2 2.9E-11 6.4E-16 119.6 7.4 112 1-119 168-280 (323)
106 cd05101 PTKc_FGFR2 Catalytic d 99.2 5.5E-11 1.2E-15 115.7 9.2 93 1-97 206-299 (304)
107 cd05059 PTKc_Tec_like Catalyti 99.2 4.7E-11 1E-15 113.0 8.4 87 1-91 168-255 (256)
108 cd05099 PTKc_FGFR4 Catalytic d 99.2 5.8E-11 1.3E-15 116.4 9.2 93 1-97 203-296 (314)
109 cd05071 PTKc_Src Catalytic dom 99.2 6.2E-11 1.4E-15 112.9 9.1 90 1-94 170-260 (262)
110 cd05065 PTKc_EphR_B Catalytic 99.2 5.5E-11 1.2E-15 113.2 8.5 90 1-94 178-268 (269)
111 cd05041 PTKc_Fes_like Catalyti 99.2 6.5E-11 1.4E-15 111.2 8.9 88 1-92 162-250 (251)
112 cd05594 STKc_PKB_alpha Catalyt 99.2 1E-11 2.2E-16 122.7 3.5 106 1-117 163-273 (325)
113 cd05039 PTKc_Csk_like Catalyti 99.2 7.2E-11 1.6E-15 111.4 9.1 89 1-93 166-255 (256)
114 cd05088 PTKc_Tie2 Catalytic do 99.2 5E-11 1.1E-15 116.5 8.2 93 1-97 190-283 (303)
115 cd08219 STKc_Nek3 Catalytic do 99.2 2.9E-11 6.3E-16 114.0 6.4 86 1-90 167-252 (255)
116 cd05085 PTKc_Fer Catalytic dom 99.2 6.6E-11 1.4E-15 111.1 8.6 88 1-92 161-249 (250)
117 cd05582 STKc_RSK_N N-terminal 99.2 9.9E-12 2.1E-16 122.2 3.1 111 1-118 165-276 (318)
118 cd05600 STKc_Sid2p_Dbf2p Catal 99.2 4.3E-11 9.3E-16 118.5 7.6 98 1-107 165-268 (333)
119 KOG0033 Ca2+/calmodulin-depend 99.2 3.8E-11 8.2E-16 114.9 6.8 87 1-90 179-267 (355)
120 KOG0588 Serine/threonine prote 99.2 4.7E-11 1E-15 126.5 8.0 86 1-90 178-263 (786)
121 cd05603 STKc_SGK2 Catalytic do 99.2 5.8E-11 1.2E-15 117.0 8.2 112 1-119 163-274 (321)
122 cd05073 PTKc_Hck Catalytic dom 99.2 8.6E-11 1.9E-15 111.5 9.1 89 1-93 170-259 (260)
123 cd05112 PTKc_Itk Catalytic dom 99.2 6.6E-11 1.4E-15 111.4 8.2 87 1-91 168-255 (256)
124 cd05614 STKc_MSK2_N N-terminal 99.2 7.3E-11 1.6E-15 116.6 8.9 109 1-119 173-290 (332)
125 cd05604 STKc_SGK3 Catalytic do 99.2 1.9E-11 4.2E-16 120.7 4.7 112 1-119 163-274 (325)
126 cd05113 PTKc_Btk_Bmx Catalytic 99.2 5.3E-11 1.2E-15 113.0 7.6 87 1-91 168-255 (256)
127 KOG4278 Protein tyrosine kinas 99.2 8.6E-11 1.9E-15 123.6 9.4 93 1-97 433-526 (1157)
128 cd05034 PTKc_Src_like Catalyti 99.2 8.3E-11 1.8E-15 111.1 8.5 89 1-93 171-260 (261)
129 cd05105 PTKc_PDGFR_alpha Catal 99.2 7.7E-11 1.7E-15 121.1 8.7 92 1-95 306-398 (400)
130 cd08229 STKc_Nek7 Catalytic do 99.2 8.6E-11 1.9E-15 111.4 8.3 91 1-94 173-265 (267)
131 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.2 9.7E-11 2.1E-15 112.5 8.7 92 1-95 177-282 (283)
132 cd05066 PTKc_EphR_A Catalytic 99.2 9.8E-11 2.1E-15 111.5 8.7 90 1-94 176-266 (267)
133 cd05100 PTKc_FGFR3 Catalytic d 99.2 1.1E-10 2.3E-15 115.7 9.2 92 1-96 203-295 (334)
134 cd06609 STKc_MST3_like Catalyt 99.1 7.6E-11 1.6E-15 112.5 7.7 86 1-90 165-251 (274)
135 cd06637 STKc_TNIK Catalytic do 99.1 7.6E-11 1.7E-15 112.0 7.6 90 1-90 178-269 (272)
136 cd05110 PTKc_HER4 Catalytic do 99.1 1.3E-10 2.7E-15 113.5 9.3 94 1-98 178-272 (303)
137 KOG2345 Serine/threonine prote 99.1 2.4E-11 5.1E-16 116.3 4.0 93 2-94 206-300 (302)
138 cd08223 STKc_Nek4 Catalytic do 99.1 9E-11 1.9E-15 110.4 7.9 86 1-90 169-254 (257)
139 cd05074 PTKc_Tyro3 Catalytic d 99.1 1.1E-10 2.3E-15 111.1 8.5 90 1-94 182-272 (273)
140 cd05057 PTKc_EGFR_like Catalyt 99.1 1.3E-10 2.7E-15 111.5 9.1 92 1-96 178-270 (279)
141 cd07862 STKc_CDK6 Catalytic do 99.1 5.6E-11 1.2E-15 114.4 6.6 87 1-90 176-287 (290)
142 KOG0614 cGMP-dependent protein 99.1 7.1E-11 1.5E-15 122.1 7.5 114 1-123 586-704 (732)
143 cd05573 STKc_ROCK_NDR_like Cat 99.1 7.1E-11 1.5E-15 117.1 7.4 98 1-108 197-297 (350)
144 cd05083 PTKc_Chk Catalytic dom 99.1 1E-10 2.3E-15 110.3 8.2 88 1-92 164-252 (254)
145 cd05103 PTKc_VEGFR2 Catalytic 99.1 1E-10 2.2E-15 116.7 8.6 93 1-96 248-341 (343)
146 cd05574 STKc_phototropin_like 99.1 8.6E-11 1.9E-15 114.8 7.8 100 1-109 199-302 (316)
147 cd05617 STKc_aPKC_zeta Catalyt 99.1 3.7E-11 8E-16 119.1 5.3 114 1-119 163-283 (327)
148 cd06636 STKc_MAP4K4_6 Catalyti 99.1 7.6E-11 1.6E-15 113.0 7.3 90 1-90 188-279 (282)
149 cd06628 STKc_MAPKKK_Byr2_like 99.1 9.7E-11 2.1E-15 111.0 7.9 86 1-90 179-264 (267)
150 KOG0582 Ste20-like serine/thre 99.1 7.3E-11 1.6E-15 120.4 7.3 94 1-96 197-301 (516)
151 cd07848 STKc_CDKL5 Catalytic d 99.1 8.5E-11 1.8E-15 113.0 7.5 87 1-90 168-284 (287)
152 cd05051 PTKc_DDR Catalytic dom 99.1 1.2E-10 2.5E-15 112.4 8.4 89 1-92 199-295 (296)
153 cd05107 PTKc_PDGFR_beta Cataly 99.1 1.1E-10 2.3E-15 120.2 8.6 92 1-95 308-400 (401)
154 cd08528 STKc_Nek10 Catalytic d 99.1 1.2E-10 2.5E-15 110.7 8.3 89 1-92 180-268 (269)
155 cd08217 STKc_Nek2 Catalytic do 99.1 1.2E-10 2.6E-15 109.3 8.2 86 1-90 177-262 (265)
156 cd05588 STKc_aPKC Catalytic do 99.1 1.2E-10 2.6E-15 115.5 8.6 108 1-119 163-285 (329)
157 cd08220 STKc_Nek8 Catalytic do 99.1 1.3E-10 2.7E-15 109.1 8.3 86 1-90 168-253 (256)
158 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.1 9.8E-11 2.1E-15 111.1 7.6 86 1-91 171-257 (258)
159 cd05618 STKc_aPKC_iota Catalyt 99.1 3.5E-11 7.5E-16 119.5 4.7 108 1-119 163-285 (329)
160 cd06651 STKc_MEKK3 Catalytic d 99.1 7.5E-11 1.6E-15 112.3 6.7 86 1-90 176-261 (266)
161 KOG0199 ACK and related non-re 99.1 7.2E-11 1.6E-15 125.6 7.1 84 2-89 283-367 (1039)
162 cd08218 STKc_Nek1 Catalytic do 99.1 1.2E-10 2.7E-15 109.6 8.0 86 1-90 168-253 (256)
163 cd05572 STKc_cGK_PKG Catalytic 99.1 1.2E-10 2.6E-15 110.2 7.9 86 1-89 159-251 (262)
164 PTZ00283 serine/threonine prot 99.1 9.1E-11 2E-15 123.9 7.7 86 1-90 212-297 (496)
165 cd06649 PKc_MEK2 Catalytic dom 99.1 1.3E-10 2.7E-15 115.3 8.0 87 1-90 169-301 (331)
166 cd06631 STKc_YSK4 Catalytic do 99.1 1.4E-10 3E-15 110.0 8.0 87 1-90 175-262 (265)
167 cd05630 STKc_GRK6 Catalytic do 99.1 7.4E-11 1.6E-15 114.2 6.1 108 1-118 168-283 (285)
168 cd05096 PTKc_DDR1 Catalytic do 99.1 1.5E-10 3.2E-15 112.7 8.2 89 1-92 207-303 (304)
169 cd05580 STKc_PKA Catalytic dom 99.1 1.4E-10 3.1E-15 112.1 7.8 108 1-119 165-277 (290)
170 KOG0589 Serine/threonine prote 99.1 1E-10 2.2E-15 120.4 7.1 86 1-90 173-258 (426)
171 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 2.2E-10 4.7E-15 108.2 8.8 91 1-95 173-266 (267)
172 cd06646 STKc_MAP4K5 Catalytic 99.1 6.9E-11 1.5E-15 112.2 5.2 91 1-91 173-266 (267)
173 cd05632 STKc_GRK5 Catalytic do 99.1 1.4E-10 3E-15 112.2 7.3 108 1-117 168-282 (285)
174 cd06640 STKc_MST4 Catalytic do 99.1 1.1E-10 2.4E-15 111.9 6.6 86 1-90 168-253 (277)
175 cd05596 STKc_ROCK Catalytic do 99.1 1.5E-10 3.3E-15 117.1 7.7 112 1-118 210-326 (370)
176 cd05095 PTKc_DDR2 Catalytic do 99.1 2.1E-10 4.5E-15 111.2 8.3 89 1-92 199-295 (296)
177 PTZ00036 glycogen synthase kin 99.1 1.1E-10 2.4E-15 121.2 6.6 88 1-90 237-351 (440)
178 cd06607 STKc_TAO Catalytic dom 99.1 2.2E-10 4.7E-15 111.9 8.2 89 1-90 178-267 (307)
179 cd06642 STKc_STK25-YSK1 Cataly 99.1 1.7E-10 3.7E-15 110.5 7.3 86 1-90 168-253 (277)
180 KOG0597 Serine-threonine prote 99.1 1.8E-10 3.8E-15 120.4 7.7 85 1-90 167-251 (808)
181 cd05628 STKc_NDR1 Catalytic do 99.1 3.1E-10 6.7E-15 114.1 9.3 105 1-114 203-311 (363)
182 cd05097 PTKc_DDR_like Catalyti 99.1 3E-10 6.5E-15 110.1 8.9 89 1-92 198-294 (295)
183 cd06608 STKc_myosinIII_like Ca 99.1 2.1E-10 4.6E-15 108.4 7.5 90 1-90 180-272 (275)
184 cd05611 STKc_Rim15_like Cataly 99.1 2.2E-10 4.8E-15 108.3 7.5 98 1-104 160-259 (260)
185 smart00219 TyrKc Tyrosine kina 99.1 2.8E-10 6.1E-15 106.5 8.2 86 1-90 171-257 (258)
186 cd05046 PTK_CCK4 Pseudokinase 99.1 3.1E-10 6.7E-15 108.2 8.5 89 1-92 185-274 (275)
187 PTZ00267 NIMA-related protein 99.1 2.2E-10 4.7E-15 120.2 8.0 85 1-89 238-322 (478)
188 cd06635 STKc_TAO1 Catalytic do 99.1 3.7E-10 7.9E-15 111.0 9.1 92 1-92 188-279 (317)
189 cd07863 STKc_CDK4 Catalytic do 99.1 2.3E-10 4.9E-15 109.9 7.4 87 1-90 174-285 (288)
190 cd06632 STKc_MEKK1_plant Catal 99.1 2.4E-10 5.3E-15 107.1 7.4 88 1-90 168-255 (258)
191 cd06612 STKc_MST1_2 Catalytic 99.1 1.6E-10 3.4E-15 108.5 6.1 87 1-90 166-253 (256)
192 cd05601 STKc_CRIK Catalytic do 99.1 1.7E-10 3.6E-15 114.0 6.4 101 1-108 170-275 (330)
193 KOG0596 Dual specificity; seri 99.1 9.2E-11 2E-15 122.2 4.7 90 1-90 528-627 (677)
194 cd08225 STKc_Nek5 Catalytic do 99.1 2.9E-10 6.2E-15 106.8 7.6 86 1-90 169-254 (257)
195 KOG0194 Protein tyrosine kinas 99.1 1.1E-10 2.3E-15 122.0 5.1 95 1-98 329-424 (474)
196 cd05627 STKc_NDR2 Catalytic do 99.1 1.1E-10 2.4E-15 117.0 5.1 105 1-115 203-312 (360)
197 cd05626 STKc_LATS2 Catalytic d 99.1 2.9E-10 6.2E-15 115.2 8.0 99 1-108 215-317 (381)
198 cd05577 STKc_GRK Catalytic dom 99.1 2.5E-10 5.3E-15 109.5 7.1 106 1-117 161-275 (277)
199 cd06655 STKc_PAK2 Catalytic do 99.1 3.9E-10 8.4E-15 110.0 8.5 87 1-90 182-269 (296)
200 cd08221 STKc_Nek9 Catalytic do 99.1 4.2E-10 9.1E-15 106.0 8.3 86 1-90 168-253 (256)
201 cd06643 STKc_SLK Catalytic dom 99.1 3E-10 6.4E-15 109.1 7.4 90 1-90 170-262 (282)
202 cd06634 STKc_TAO2 Catalytic do 99.1 3.3E-10 7.2E-15 110.9 7.8 90 1-90 178-267 (308)
203 cd05583 STKc_MSK_N N-terminal 99.1 3.3E-10 7.1E-15 109.1 7.5 111 1-117 173-287 (288)
204 cd06654 STKc_PAK1 Catalytic do 99.0 3.3E-10 7.2E-15 110.3 7.5 87 1-90 183-270 (296)
205 cd05586 STKc_Sck1_like Catalyt 99.0 8.5E-11 1.9E-15 116.2 3.4 108 1-118 163-275 (330)
206 cd06613 STKc_MAP4K3_like Catal 99.0 2.9E-10 6.3E-15 107.1 6.9 90 1-90 168-260 (262)
207 cd06645 STKc_MAP4K3 Catalytic 99.0 3.3E-10 7.1E-15 107.6 7.2 90 1-90 173-265 (267)
208 cd06626 STKc_MEKK4 Catalytic d 99.0 4.7E-10 1E-14 105.7 8.3 89 1-90 170-261 (264)
209 cd07876 STKc_JNK2 Catalytic do 99.0 4.1E-10 8.9E-15 112.8 8.3 87 1-90 189-315 (359)
210 cd05077 PTK_Jak1_rpt1 Pseudoki 99.0 3.5E-10 7.5E-15 108.1 7.4 86 1-91 175-261 (262)
211 cd05629 STKc_NDR_like_fungal C 99.0 4E-10 8.7E-15 113.7 8.2 97 1-107 215-316 (377)
212 cd05579 STKc_MAST_like Catalyt 99.0 4.1E-10 8.9E-15 105.6 7.7 96 1-104 168-265 (265)
213 KOG0583 Serine/threonine prote 99.0 3.3E-10 7.2E-15 115.7 7.6 86 1-90 188-275 (370)
214 cd08227 PK_STRAD_alpha Pseudok 99.0 3.2E-10 7E-15 111.9 7.0 89 1-90 175-307 (327)
215 KOG0983 Mitogen-activated prot 99.0 3.1E-10 6.8E-15 110.1 6.6 89 1-90 258-349 (391)
216 cd05038 PTKc_Jak_rpt2 Catalyti 99.0 3.7E-10 8.1E-15 107.6 7.1 91 1-94 179-283 (284)
217 cd05599 STKc_NDR_like Catalyti 99.0 4.9E-10 1.1E-14 112.1 8.2 97 1-107 206-307 (364)
218 cd07831 STKc_MOK Catalytic dom 99.0 4.7E-10 1E-14 107.0 7.7 88 1-90 165-279 (282)
219 PTZ00284 protein kinase; Provi 99.0 2.4E-10 5.3E-15 119.1 6.2 87 1-90 312-438 (467)
220 cd07871 STKc_PCTAIRE3 Catalyti 99.0 4.1E-10 8.8E-15 109.1 7.3 88 1-90 170-285 (288)
221 cd06652 STKc_MEKK2 Catalytic d 99.0 4.6E-10 9.9E-15 106.6 7.5 86 1-90 176-261 (265)
222 cd07859 STKc_TDY_MAPK_plant Ca 99.0 2.5E-10 5.5E-15 112.2 5.9 89 1-90 173-290 (338)
223 KOG0615 Serine/threonine prote 99.0 4.4E-11 9.5E-16 121.0 0.5 90 1-90 345-437 (475)
224 cd06624 STKc_ASK Catalytic dom 99.0 4.7E-10 1E-14 106.7 7.5 89 1-90 176-265 (268)
225 cd07875 STKc_JNK1 Catalytic do 99.0 6.6E-10 1.4E-14 111.5 8.8 87 1-90 192-318 (364)
226 cd05609 STKc_MAST Catalytic do 99.0 4.6E-10 1E-14 109.4 7.5 101 1-107 183-284 (305)
227 cd08530 STKc_CNK2-like Catalyt 99.0 4.5E-10 9.9E-15 105.2 7.1 86 1-90 168-253 (256)
228 KOG0603 Ribosomal protein S6 k 99.0 2.5E-10 5.5E-15 120.5 5.9 83 1-90 480-563 (612)
229 cd06644 STKc_STK10_LOK Catalyt 99.0 6E-10 1.3E-14 107.7 8.1 90 1-90 177-269 (292)
230 cd06620 PKc_MAPKK_Byr1_like Ca 99.0 5.6E-10 1.2E-14 107.4 7.9 86 1-90 169-266 (284)
231 cd06606 STKc_MAPKKK Catalytic 99.0 5.4E-10 1.2E-14 103.9 7.5 87 1-90 170-257 (260)
232 cd06633 STKc_TAO3 Catalytic do 99.0 5.9E-10 1.3E-14 109.5 8.1 90 1-90 184-273 (313)
233 cd06614 STKc_PAK Catalytic dom 99.0 6.8E-10 1.5E-14 106.8 8.2 87 1-90 183-270 (286)
234 cd06629 STKc_MAPKKK_Bck1_like 99.0 5.7E-10 1.2E-14 106.2 7.5 89 1-90 177-269 (272)
235 cd06605 PKc_MAPKK Catalytic do 99.0 5.6E-10 1.2E-14 105.5 7.4 86 1-90 166-257 (265)
236 cd06639 STKc_myosinIIIB Cataly 99.0 6.6E-10 1.4E-14 107.1 8.0 90 1-90 195-287 (291)
237 cd06616 PKc_MKK4 Catalytic dom 99.0 4.9E-10 1.1E-14 107.7 7.1 89 1-90 174-267 (288)
238 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.0 6.7E-10 1.4E-14 106.6 7.9 91 1-94 178-283 (284)
239 cd05079 PTKc_Jak1_rpt2 Catalyt 99.0 7.5E-10 1.6E-14 106.6 8.3 91 1-94 179-283 (284)
240 cd06650 PKc_MEK1 Catalytic dom 99.0 5.7E-10 1.2E-14 111.0 7.6 87 1-90 169-299 (333)
241 cd06641 STKc_MST3 Catalytic do 99.0 6.9E-10 1.5E-14 106.4 7.9 86 1-90 168-253 (277)
242 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.0 6.5E-10 1.4E-14 107.0 7.8 86 1-91 187-273 (274)
243 cd05606 STKc_beta_ARK Catalyti 99.0 9.7E-10 2.1E-14 105.9 8.9 101 1-111 162-270 (278)
244 cd05610 STKc_MASTL Catalytic d 99.0 5.2E-10 1.1E-14 122.3 7.9 87 1-90 547-634 (669)
245 cd06648 STKc_PAK_II Catalytic 99.0 6E-10 1.3E-14 107.8 7.5 86 1-90 182-269 (285)
246 cd06610 STKc_OSR1_SPAK Catalyt 99.0 5.7E-10 1.2E-14 105.2 7.1 87 1-90 173-264 (267)
247 cd05122 PKc_STE Catalytic doma 99.0 6.6E-10 1.4E-14 102.9 7.4 86 1-90 164-251 (253)
248 cd07861 STKc_CDK1_euk Catalyti 99.0 5.4E-10 1.2E-14 106.9 7.0 88 1-90 168-282 (285)
249 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.0 1E-09 2.2E-14 104.6 8.9 91 1-92 169-268 (269)
250 cd06611 STKc_SLK_like Catalyti 99.0 6.5E-10 1.4E-14 106.4 7.6 90 1-90 170-262 (280)
251 cd06638 STKc_myosinIIIA Cataly 99.0 5.7E-10 1.2E-14 107.0 7.1 90 1-90 191-283 (286)
252 cd08215 STKc_Nek Catalytic dom 99.0 8.1E-10 1.8E-14 103.0 7.9 86 1-90 170-255 (258)
253 cd06623 PKc_MAPKK_plant_like C 99.0 8.7E-10 1.9E-14 103.7 8.0 86 1-90 167-256 (264)
254 cd07874 STKc_JNK3 Catalytic do 99.0 6.5E-10 1.4E-14 111.0 7.4 87 1-90 185-311 (355)
255 cd06622 PKc_MAPKK_PBS2_like Ca 99.0 1E-09 2.2E-14 105.4 8.4 90 1-90 168-262 (286)
256 cd06619 PKc_MKK5 Catalytic dom 99.0 9.3E-10 2E-14 105.8 8.0 86 1-90 160-253 (279)
257 cd07835 STKc_CDK1_like Catalyt 99.0 7.9E-10 1.7E-14 105.8 7.5 88 1-90 166-280 (283)
258 cd08222 STKc_Nek11 Catalytic d 99.0 8.2E-10 1.8E-14 104.4 7.4 86 1-90 172-257 (260)
259 PLN00034 mitogen-activated pro 99.0 9.3E-10 2E-14 110.1 8.0 89 1-90 235-328 (353)
260 cd05633 STKc_GRK3 Catalytic do 99.0 8.7E-10 1.9E-14 106.4 7.5 99 1-108 162-267 (279)
261 cd07860 STKc_CDK2_3 Catalytic 99.0 9.3E-10 2E-14 105.4 7.6 88 1-90 167-281 (284)
262 cd05625 STKc_LATS1 Catalytic d 99.0 5.8E-10 1.3E-14 112.7 6.5 96 1-106 215-315 (382)
263 cd07853 STKc_NLK Catalytic dom 99.0 6.5E-10 1.4E-14 112.0 6.8 88 1-90 171-288 (372)
264 cd05623 STKc_MRCK_alpha Cataly 99.0 1.8E-09 3.8E-14 107.2 9.7 102 1-108 170-278 (332)
265 cd05621 STKc_ROCK2 Catalytic d 99.0 1.1E-09 2.4E-14 111.0 8.1 113 1-119 210-327 (370)
266 cd05598 STKc_LATS Catalytic do 99.0 6.5E-10 1.4E-14 112.0 6.3 97 1-107 211-312 (376)
267 cd06617 PKc_MKK3_6 Catalytic d 99.0 1.1E-09 2.4E-14 104.7 7.6 89 1-90 170-261 (283)
268 cd05622 STKc_ROCK1 Catalytic d 99.0 1.1E-09 2.4E-14 110.9 8.0 90 1-90 210-304 (371)
269 cd06653 STKc_MEKK3_like_1 Cata 99.0 1.4E-09 3E-14 103.4 8.2 86 1-90 176-261 (264)
270 cd06917 STKc_NAK1_like Catalyt 99.0 8.5E-10 1.8E-14 105.3 6.7 87 1-90 168-255 (277)
271 cd06630 STKc_MEKK1 Catalytic d 99.0 1.1E-09 2.4E-14 103.7 7.3 87 1-90 175-264 (268)
272 KOG0579 Ste20-like serine/thre 99.0 7.7E-10 1.7E-14 116.8 6.8 89 1-90 197-289 (1187)
273 cd08226 PK_STRAD_beta Pseudoki 99.0 1.1E-09 2.4E-14 108.2 7.5 95 1-96 175-316 (328)
274 cd05624 STKc_MRCK_beta Catalyt 99.0 1.4E-09 2.9E-14 108.1 8.2 101 1-107 170-277 (331)
275 cd06618 PKc_MKK7 Catalytic dom 99.0 1.3E-09 2.9E-14 105.6 7.9 89 1-90 181-273 (296)
276 cd06658 STKc_PAK5 Catalytic do 99.0 1.2E-09 2.5E-14 106.4 7.4 86 1-90 185-272 (292)
277 cd06659 STKc_PAK6 Catalytic do 99.0 1.3E-09 2.9E-14 106.2 7.8 87 1-90 184-271 (297)
278 cd07872 STKc_PCTAIRE2 Catalyti 99.0 9.6E-10 2.1E-14 107.4 6.6 88 1-90 171-286 (309)
279 cd07869 STKc_PFTAIRE1 Catalyti 99.0 1E-09 2.2E-14 107.0 6.6 88 1-90 170-288 (303)
280 cd05086 PTKc_Aatyk2 Catalytic 99.0 2.9E-09 6.3E-14 101.7 9.7 90 1-91 168-266 (268)
281 cd07873 STKc_PCTAIRE1 Catalyti 99.0 1.2E-09 2.6E-14 106.1 7.1 88 1-90 171-286 (301)
282 PHA02882 putative serine/threo 98.9 1.2E-09 2.6E-14 106.5 6.8 85 1-91 200-293 (294)
283 cd07838 STKc_CDK4_6_like Catal 98.9 1.2E-09 2.5E-14 104.3 6.6 87 1-90 173-284 (287)
284 KOG4645 MAPKKK (MAP kinase kin 98.9 2.5E-10 5.3E-15 128.1 2.2 89 1-90 1405-1494(1509)
285 cd07839 STKc_CDK5 Catalytic do 98.9 1.1E-09 2.4E-14 104.8 6.4 88 1-90 166-281 (284)
286 cd07846 STKc_CDKL2_3 Catalytic 98.9 1.4E-09 3E-14 104.1 7.0 88 1-90 167-283 (286)
287 cd07845 STKc_CDK10 Catalytic d 98.9 1.7E-09 3.6E-14 105.5 7.3 88 1-90 175-290 (309)
288 cd06627 STKc_Cdc7_like Catalyt 98.9 2.3E-09 5E-14 100.1 7.9 86 1-90 166-251 (254)
289 cd07847 STKc_CDKL1_4 Catalytic 98.9 1.5E-09 3.2E-14 103.8 6.7 88 1-90 167-283 (286)
290 KOG4717 Serine/threonine prote 98.9 1.2E-09 2.6E-14 113.3 6.2 83 2-89 186-269 (864)
291 cd06615 PKc_MEK Catalytic doma 98.9 1.7E-09 3.6E-14 106.0 7.1 87 1-90 165-287 (308)
292 cd05123 STKc_AGC Catalytic dom 98.9 1.9E-09 4.1E-14 100.8 7.1 84 1-89 160-246 (250)
293 cd05613 STKc_MSK1_N N-terminal 98.9 2.2E-09 4.9E-14 103.4 7.8 107 1-116 173-288 (290)
294 cd05042 PTKc_Aatyk Catalytic d 98.9 2.6E-09 5.6E-14 101.7 8.2 90 1-91 169-267 (269)
295 cd07832 STKc_CCRK Catalytic do 98.9 2.1E-09 4.6E-14 102.7 7.5 88 1-90 167-282 (286)
296 KOG0695 Serine/threonine prote 98.9 1E-09 2.2E-14 108.9 5.2 156 1-173 418-583 (593)
297 cd07878 STKc_p38beta_MAPK11 Ca 98.9 1.7E-09 3.8E-14 107.3 7.1 88 1-90 182-298 (343)
298 cd08216 PK_STRAD Pseudokinase 98.9 1.6E-09 3.4E-14 105.7 6.5 89 1-90 175-295 (314)
299 PHA03390 pk1 serine/threonine- 98.9 1.8E-09 3.9E-14 103.6 6.6 87 1-90 173-262 (267)
300 cd07854 STKc_MAPK4_6 Catalytic 98.9 3.4E-09 7.3E-14 105.6 8.8 88 1-90 185-300 (342)
301 KOG0599 Phosphorylase kinase g 98.9 1.1E-09 2.4E-14 106.3 5.0 90 1-90 189-283 (411)
302 cd07837 STKc_CdkB_plant Cataly 98.9 1.9E-09 4.1E-14 103.8 6.7 88 1-90 178-291 (295)
303 cd07833 STKc_CDKL Catalytic do 98.9 2.9E-09 6.4E-14 101.8 7.9 88 1-90 168-285 (288)
304 cd06656 STKc_PAK3 Catalytic do 98.9 8.7E-10 1.9E-14 107.4 4.3 87 1-90 182-269 (297)
305 cd05118 STKc_CMGC Catalytic do 98.9 2.2E-09 4.7E-14 102.3 6.9 88 1-90 165-280 (283)
306 KOG0580 Serine/threonine prote 98.9 2.8E-09 6E-14 101.7 7.4 85 1-90 189-273 (281)
307 cd07843 STKc_CDC2L1 Catalytic 98.9 2.7E-09 5.9E-14 102.9 7.5 88 1-90 173-290 (293)
308 cd05578 STKc_Yank1 Catalytic d 98.9 1.8E-09 3.9E-14 102.0 6.1 84 1-89 166-254 (258)
309 cd07850 STKc_JNK Catalytic dom 98.9 2.2E-09 4.7E-14 107.3 6.8 87 1-90 184-311 (353)
310 cd06647 STKc_PAK_I Catalytic d 98.9 1.7E-09 3.8E-14 105.1 6.0 87 1-90 182-269 (293)
311 KOG0612 Rho-associated, coiled 98.9 1.7E-09 3.6E-14 120.3 6.3 110 1-119 243-359 (1317)
312 cd07868 STKc_CDK8 Catalytic do 98.9 3.6E-09 7.7E-14 103.5 7.8 88 1-90 182-314 (317)
313 cd06621 PKc_MAPKK_Pek1_like Ca 98.9 3.2E-09 6.9E-14 102.5 7.4 86 1-90 170-266 (287)
314 cd05581 STKc_PDK1 Catalytic do 98.9 3E-09 6.5E-14 101.0 6.8 85 1-90 189-277 (280)
315 cd07866 STKc_BUR1 Catalytic do 98.9 3.7E-09 8.1E-14 102.2 7.4 88 1-90 193-308 (311)
316 cd07834 STKc_MAPK Catalytic do 98.9 4.5E-09 9.8E-14 103.3 8.1 88 1-90 173-289 (330)
317 PHA03207 serine/threonine kina 98.9 3.4E-09 7.4E-14 107.9 7.2 87 1-90 254-375 (392)
318 KOG1989 ARK protein kinase fam 98.9 1.8E-09 4E-14 117.3 5.3 92 2-97 223-314 (738)
319 cd07879 STKc_p38delta_MAPK13 C 98.9 2.9E-09 6.3E-14 106.0 6.3 88 1-90 181-297 (342)
320 KOG0585 Ca2+/calmodulin-depend 98.9 2.4E-09 5.1E-14 110.3 5.6 91 1-91 282-373 (576)
321 cd07830 STKc_MAK_like Catalyti 98.9 6.8E-09 1.5E-13 99.2 8.5 88 1-90 165-280 (283)
322 smart00220 S_TKc Serine/Threon 98.9 5.4E-09 1.2E-13 95.8 7.5 85 1-89 153-240 (244)
323 PTZ00024 cyclin-dependent prot 98.9 4.4E-09 9.6E-14 103.9 7.4 88 1-90 200-313 (335)
324 cd05037 PTK_Jak_rpt1 Pseudokin 98.9 5E-09 1.1E-13 98.5 7.3 87 1-91 171-258 (259)
325 PLN00009 cyclin-dependent kina 98.9 3.8E-09 8.3E-14 102.0 6.6 88 1-90 170-284 (294)
326 PTZ00266 NIMA-related protein 98.9 3.1E-09 6.8E-14 119.6 6.8 86 1-89 208-294 (1021)
327 KOG0032 Ca2+/calmodulin-depend 98.9 5.5E-09 1.2E-13 107.2 8.1 87 1-90 205-293 (382)
328 cd07840 STKc_CDK9_like Catalyt 98.9 4.7E-09 1E-13 100.0 7.1 88 1-90 168-284 (287)
329 cd07836 STKc_Pho85 Catalytic d 98.8 3.9E-09 8.4E-14 100.9 6.3 88 1-90 167-281 (284)
330 cd06657 STKc_PAK4 Catalytic do 98.8 6.8E-09 1.5E-13 101.1 8.0 86 1-90 183-270 (292)
331 cd07864 STKc_CDK12 Catalytic d 98.8 5.7E-09 1.2E-13 100.9 7.2 88 1-90 184-299 (302)
332 cd05597 STKc_DMPK_like Catalyt 98.8 1.6E-08 3.4E-13 100.5 10.5 102 1-108 170-278 (331)
333 cd07849 STKc_ERK1_2_like Catal 98.8 4.7E-09 1E-13 104.0 6.6 88 1-90 176-292 (336)
334 cd07855 STKc_ERK5 Catalytic do 98.8 5.9E-09 1.3E-13 103.2 7.3 88 1-90 178-294 (334)
335 KOG1025 Epidermal growth facto 98.8 5.7E-09 1.2E-13 113.0 7.5 92 2-97 868-960 (1177)
336 cd07858 STKc_TEY_MAPK_plant Ca 98.8 5.9E-09 1.3E-13 103.5 7.2 88 1-90 175-291 (337)
337 cd07852 STKc_MAPK15 Catalytic 98.8 9.2E-09 2E-13 101.8 8.2 88 1-90 179-295 (337)
338 cd07851 STKc_p38 Catalytic dom 98.8 5.3E-09 1.2E-13 104.2 6.5 88 1-90 182-298 (343)
339 cd07867 STKc_CDC2L6 Catalytic 98.8 2.5E-09 5.3E-14 104.3 4.0 88 1-90 182-314 (317)
340 KOG0195 Integrin-linked kinase 98.8 4.6E-09 1E-13 102.0 5.5 95 1-95 353-447 (448)
341 cd07865 STKc_CDK9 Catalytic do 98.8 8.3E-09 1.8E-13 99.7 7.2 88 1-90 190-307 (310)
342 PHA03212 serine/threonine kina 98.8 7.3E-09 1.6E-13 106.0 7.2 87 1-90 250-376 (391)
343 KOG0584 Serine/threonine prote 98.8 3.6E-09 7.8E-14 111.8 4.8 85 1-90 211-296 (632)
344 cd07841 STKc_CDK7 Catalytic do 98.8 7.3E-09 1.6E-13 100.1 6.5 88 1-90 169-282 (298)
345 KOG0577 Serine/threonine prote 98.8 6.2E-09 1.3E-13 109.5 6.3 89 1-90 189-278 (948)
346 cd07829 STKc_CDK_like Catalyti 98.8 1.1E-08 2.5E-13 97.2 7.6 88 1-90 165-279 (282)
347 PLN00113 leucine-rich repeat r 98.8 4.3E-09 9.3E-14 118.9 5.1 93 1-96 845-953 (968)
348 KOG0660 Mitogen-activated prot 98.8 1E-08 2.2E-13 102.5 7.0 87 2-90 195-310 (359)
349 cd05576 STKc_RPK118_like Catal 98.8 8.3E-09 1.8E-13 97.1 5.2 75 1-84 149-223 (237)
350 PF00069 Pkinase: Protein kina 98.7 2.4E-09 5.2E-14 100.5 1.4 87 1-90 165-257 (260)
351 KOG0595 Serine/threonine-prote 98.7 9.2E-09 2E-13 104.2 5.3 86 1-89 181-267 (429)
352 PHA03209 serine/threonine kina 98.7 1.2E-08 2.7E-13 102.5 6.3 87 1-90 223-351 (357)
353 cd07842 STKc_CDK8_like Catalyt 98.7 1.1E-08 2.4E-13 99.4 5.6 88 1-90 182-313 (316)
354 cd07856 STKc_Sty1_Hog1 Catalyt 98.7 1.8E-08 3.9E-13 100.1 7.2 88 1-90 172-288 (328)
355 cd07844 STKc_PCTAIRE_like Cata 98.7 1.8E-08 4E-13 96.9 7.1 88 1-90 170-288 (291)
356 cd07857 STKc_MPK1 Catalytic do 98.7 2.1E-08 4.7E-13 99.1 7.2 88 1-90 176-292 (332)
357 KOG0661 MAPK related serine/th 98.7 2.4E-08 5.2E-13 102.9 7.2 87 2-90 177-291 (538)
358 KOG0593 Predicted protein kina 98.7 2.8E-08 6.1E-13 97.8 7.2 86 2-89 169-283 (396)
359 cd07870 STKc_PFTAIRE2 Catalyti 98.7 2.6E-08 5.7E-13 96.0 7.0 88 1-90 170-288 (291)
360 KOG1094 Discoidin domain recep 98.7 2.4E-08 5.2E-13 105.0 6.9 91 1-94 706-804 (807)
361 cd07880 STKc_p38gamma_MAPK12 C 98.7 2.9E-08 6.3E-13 99.0 6.7 87 1-89 182-297 (343)
362 KOG0604 MAP kinase-activated p 98.7 1.5E-08 3.3E-13 99.5 4.2 87 1-90 230-322 (400)
363 cd07877 STKc_p38alpha_MAPK14 C 98.7 2.2E-08 4.9E-13 99.9 5.6 88 1-90 184-300 (345)
364 PHA03211 serine/threonine kina 98.7 3.2E-08 6.9E-13 103.9 6.9 87 1-90 329-455 (461)
365 PLN00181 protein SPA1-RELATED; 98.7 2.3E-08 5E-13 111.3 5.8 83 1-89 182-264 (793)
366 KOG0574 STE20-like serine/thre 98.7 3.2E-09 6.9E-14 104.2 -1.0 86 1-90 196-283 (502)
367 PRK13184 pknD serine/threonine 98.6 3.3E-08 7.2E-13 110.8 6.7 93 1-96 198-292 (932)
368 KOG0667 Dual-specificity tyros 98.6 7.5E-08 1.6E-12 102.3 6.6 86 2-90 356-502 (586)
369 KOG1006 Mitogen-activated prot 98.6 3.2E-08 6.9E-13 96.0 2.9 88 1-90 234-327 (361)
370 PHA03210 serine/threonine kina 98.5 7.3E-08 1.6E-12 101.9 5.4 87 1-90 335-454 (501)
371 KOG0658 Glycogen synthase kina 98.5 3.2E-07 6.9E-12 92.0 7.0 87 2-90 193-306 (364)
372 KOG0659 Cdk activating kinase 98.4 6E-07 1.3E-11 87.1 7.2 87 2-90 169-281 (318)
373 KOG0600 Cdc2-related protein k 98.4 4.5E-07 9.9E-12 94.2 6.7 87 2-90 287-400 (560)
374 KOG0671 LAMMER dual specificit 98.4 7.1E-08 1.5E-12 97.2 0.7 86 2-90 277-406 (415)
375 KOG0663 Protein kinase PITSLRE 98.4 7.6E-07 1.6E-11 88.8 6.8 87 2-90 245-361 (419)
376 KOG0607 MAP kinase-interacting 98.3 2.9E-07 6.4E-12 91.3 3.5 87 1-89 253-360 (463)
377 KOG0611 Predicted serine/threo 98.3 1.3E-06 2.8E-11 89.0 7.8 85 2-91 220-304 (668)
378 KOG0608 Warts/lats-like serine 98.3 3.2E-07 6.9E-12 97.5 3.2 107 1-119 838-949 (1034)
379 KOG0594 Protein kinase PCTAIRE 98.3 1.5E-06 3.1E-11 86.8 7.0 87 2-90 188-302 (323)
380 KOG0586 Serine/threonine prote 98.3 3.3E-07 7.2E-12 96.9 2.0 86 1-90 221-306 (596)
381 KOG1187 Serine/threonine prote 98.2 1.9E-06 4.2E-11 87.9 6.2 92 1-95 245-353 (361)
382 KOG1035 eIF-2alpha kinase GCN2 98.2 2.5E-06 5.4E-11 96.2 7.0 84 1-89 782-870 (1351)
383 PLN03225 Serine/threonine-prot 98.1 3.8E-06 8.1E-11 90.6 6.5 76 14-90 356-450 (566)
384 KOG0587 Traf2- and Nck-interac 98.1 1.3E-06 2.7E-11 95.8 2.2 89 1-90 190-282 (953)
385 KOG0670 U4/U6-associated splic 98.1 1.3E-06 2.8E-11 91.3 1.7 86 2-90 603-746 (752)
386 KOG0606 Microtubule-associated 98.0 5E-06 1.1E-10 92.9 5.7 107 1-113 225-332 (1205)
387 KOG0603 Ribosomal protein S6 k 98.0 3.4E-06 7.3E-11 89.8 4.1 106 1-119 160-266 (612)
388 KOG1290 Serine/threonine prote 98.0 5.2E-06 1.1E-10 86.3 4.4 86 2-90 419-550 (590)
389 KOG0665 Jun-N-terminal kinase 97.9 2.1E-05 4.5E-10 78.3 6.5 86 2-90 185-310 (369)
390 KOG1023 Natriuretic peptide re 97.9 3.6E-05 7.8E-10 81.2 7.8 96 1-96 118-226 (484)
391 KOG1027 Serine/threonine prote 97.8 3.4E-06 7.4E-11 92.1 -0.5 85 1-90 681-767 (903)
392 KOG1151 Tousled-like protein k 97.8 2.8E-05 6E-10 80.3 5.6 89 1-89 647-740 (775)
393 KOG2052 Activin A type IB rece 97.8 1.9E-05 4.1E-10 81.4 4.3 96 1-96 387-505 (513)
394 PLN03224 probable serine/threo 97.8 5E-05 1.1E-09 80.9 7.1 74 17-90 412-500 (507)
395 KOG3653 Transforming growth fa 97.7 3.8E-05 8.3E-10 79.7 5.1 95 1-97 385-506 (534)
396 KOG0984 Mitogen-activated prot 97.7 3.9E-05 8.5E-10 72.5 4.6 52 1-52 215-268 (282)
397 KOG0666 Cyclin C-dependent kin 97.6 9.3E-05 2E-09 73.7 5.7 87 2-90 207-337 (438)
398 KOG4158 BRPK/PTEN-induced prot 97.6 9.5E-05 2.1E-09 75.7 5.6 88 1-89 418-509 (598)
399 KOG0669 Cyclin T-dependent kin 97.6 0.00018 3.9E-09 69.9 6.9 87 2-90 196-315 (376)
400 KOG0576 Mitogen-activated prot 97.4 0.00012 2.6E-09 78.8 3.9 89 1-89 179-270 (829)
401 KOG0664 Nemo-like MAPK-related 97.4 0.00021 4.4E-09 70.2 4.8 87 2-90 225-343 (449)
402 KOG0668 Casein kinase II, alph 97.3 0.00028 6E-09 67.8 4.8 87 2-90 200-322 (338)
403 KOG4236 Serine/threonine prote 97.2 4.6E-05 9.9E-10 80.1 -1.8 84 1-89 733-818 (888)
404 smart00221 STYKc Protein kinas 97.1 0.00069 1.5E-08 61.5 5.0 48 1-50 166-215 (225)
405 KOG1033 eIF-2alpha kinase PEK/ 97.0 0.00061 1.3E-08 71.6 3.8 77 1-85 429-507 (516)
406 KOG0590 Checkpoint kinase and 96.8 0.00039 8.5E-09 75.6 1.1 86 1-89 491-584 (601)
407 KOG1240 Protein kinase contain 96.8 0.0015 3.2E-08 74.1 5.4 86 1-90 194-291 (1431)
408 KOG0662 Cyclin-dependent kinas 96.8 0.0024 5.2E-08 59.5 5.5 87 2-90 169-283 (292)
409 KOG4250 TANK binding protein k 96.8 0.0018 4E-08 70.2 5.4 80 1-82 190-296 (732)
410 KOG1167 Serine/threonine prote 96.5 0.0014 3.1E-08 67.2 2.7 87 2-90 245-381 (418)
411 KOG0606 Microtubule-associated 96.5 0.0031 6.8E-08 71.3 5.3 107 1-113 1002-1109(1205)
412 PF14531 Kinase-like: Kinase-l 95.9 0.0026 5.6E-08 63.2 0.7 63 13-81 226-288 (288)
413 COG0515 SPS1 Serine/threonine 95.9 0.03 6.5E-07 51.7 7.8 90 1-90 175-275 (384)
414 KOG1345 Serine/threonine kinas 95.2 0.016 3.5E-07 57.2 3.3 87 2-89 188-283 (378)
415 PF02237 BPL_C: Biotin protein 86.3 1.7 3.6E-05 31.4 4.6 33 251-296 2-34 (48)
416 KOG0590 Checkpoint kinase and 85.8 0.21 4.6E-06 54.6 -0.4 87 1-89 196-285 (601)
417 smart00743 Agenet Tudor-like d 85.2 1.7 3.7E-05 32.4 4.5 38 248-296 2-39 (61)
418 PF15057 DUF4537: Domain of un 84.5 4.7 0.0001 35.1 7.5 88 198-295 1-97 (124)
419 KOG2137 Protein kinase [Signal 83.9 0.32 6.9E-06 53.3 -0.1 85 1-89 176-264 (700)
420 PF12073 DUF3553: Protein of u 81.5 5.2 0.00011 29.7 5.5 37 274-318 13-49 (52)
421 KOG1164 Casein kinase (serine/ 79.3 6 0.00013 39.3 7.2 84 13-96 213-299 (322)
422 cd04483 hOBFC1_like hOBFC1_lik 75.8 3.9 8.5E-05 33.7 3.9 22 244-265 58-79 (92)
423 cd00180 PKc Catalytic domain o 74.3 2.3 4.9E-05 37.1 2.3 27 64-90 188-214 (215)
424 smart00333 TUDOR Tudor domain. 72.7 7.1 0.00015 28.4 4.3 37 248-296 2-38 (57)
425 KOG1266 Protein kinase [Signal 71.3 2.5 5.5E-05 43.2 2.0 69 14-90 259-331 (458)
426 PF02211 NHase_beta: Nitrile h 62.5 6.2 0.00013 37.9 2.7 50 235-286 119-170 (222)
427 KOG1093 Predicted protein kina 60.8 6.5 0.00014 42.6 2.7 75 13-88 107-192 (725)
428 COG0250 NusG Transcription ant 57.5 20 0.00043 33.3 5.0 37 247-295 122-159 (178)
429 PF11061 DUF2862: Protein of u 54.6 14 0.0003 28.7 2.9 53 251-309 1-58 (64)
430 cd04466 S1_YloQ_GTPase S1_YloQ 53.0 13 0.00028 28.0 2.6 26 193-221 36-61 (68)
431 PF04717 Phage_base_V: Phage-r 52.3 14 0.0003 29.1 2.8 17 279-295 1-18 (79)
432 COG4248 Uncharacterized protei 49.0 45 0.00098 35.6 6.5 82 14-95 198-301 (637)
433 cd02794 MopB_CT_DmsA-EC The Mo 48.4 34 0.00074 28.8 4.8 25 180-206 31-55 (121)
434 cd02783 MopB_CT_2 The MopB_CT_ 47.7 16 0.00034 32.8 2.7 25 180-206 33-57 (156)
435 cd02787 MopB_CT_ydeP The MopB_ 45.8 46 0.001 27.6 5.1 25 180-206 32-56 (112)
436 cd02784 MopB_CT_PHLH The MopB_ 45.6 19 0.00041 31.9 2.8 25 180-206 39-63 (137)
437 cd02789 MopB_CT_FmdC-FwdD The 45.2 36 0.00078 28.4 4.3 25 180-206 32-56 (106)
438 PRK05609 nusG transcription an 44.9 31 0.00068 31.3 4.2 54 192-246 124-180 (181)
439 KOG0601 Cyclin-dependent kinas 44.2 11 0.00024 40.6 1.3 83 1-89 295-378 (524)
440 PF02359 CDC48_N: Cell divisio 43.7 22 0.00047 28.6 2.7 64 181-259 18-83 (87)
441 cd02777 MopB_CT_DMSOR-like The 43.4 17 0.00037 31.0 2.1 25 180-206 35-59 (127)
442 CHL00125 psaE photosystem I su 42.7 24 0.00051 27.1 2.5 32 194-225 1-33 (64)
443 PF13437 HlyD_3: HlyD family s 42.7 60 0.0013 26.3 5.2 34 244-287 45-79 (105)
444 cd02792 MopB_CT_Formate-Dh-Na- 42.2 19 0.00042 30.1 2.3 25 180-206 36-60 (122)
445 cd02778 MopB_CT_Thiosulfate-R- 40.7 21 0.00045 30.0 2.2 25 180-206 31-55 (123)
446 TIGR01955 RfaH transcriptional 40.5 33 0.00071 30.4 3.6 38 247-296 107-144 (159)
447 cd04720 BAH_Orc1p_Yeast BAH, o 40.0 37 0.0008 31.4 3.9 45 194-243 52-99 (179)
448 COG4890 Predicted outer membra 40.0 23 0.00049 24.1 1.8 22 335-356 4-26 (37)
449 smart00739 KOW KOW (Kyprides, 39.6 43 0.00094 20.4 3.1 27 195-222 2-28 (28)
450 PTZ00275 biotin-acetyl-CoA-car 39.0 37 0.00081 33.7 4.0 36 248-296 233-268 (285)
451 TIGR00121 birA_ligase birA, bi 38.5 38 0.00083 32.3 3.9 36 248-296 189-224 (237)
452 PRK11886 bifunctional biotin-- 38.5 45 0.00098 33.3 4.6 35 249-296 269-303 (319)
453 COG1162 Predicted GTPases [Gen 38.4 57 0.0012 32.8 5.2 62 151-221 3-67 (301)
454 cd02786 MopB_CT_3 The MopB_CT_ 38.2 30 0.00066 28.7 2.8 25 180-206 32-56 (116)
455 PRK06763 F0F1 ATP synthase sub 38.0 1.5E+02 0.0032 28.2 7.5 118 153-284 42-196 (213)
456 cd02790 MopB_CT_Formate-Dh_H F 37.8 25 0.00054 29.1 2.2 25 180-206 36-60 (116)
457 COG2139 RPL21A Ribosomal prote 37.3 57 0.0012 27.4 4.1 41 246-295 30-76 (98)
458 cd02780 MopB_CT_Tetrathionate_ 36.6 26 0.00057 30.6 2.3 25 180-206 31-55 (143)
459 PRK02749 photosystem I reactio 36.6 39 0.00084 26.5 2.8 32 194-225 2-34 (71)
460 cd04508 TUDOR Tudor domains ar 36.5 38 0.00081 23.5 2.7 23 274-296 12-34 (48)
461 PF02941 FeThRed_A: Ferredoxin 35.9 18 0.00039 28.3 0.9 34 251-286 1-38 (67)
462 PF01568 Molydop_binding: Moly 35.9 14 0.00031 30.3 0.4 46 180-229 31-78 (110)
463 cd02785 MopB_CT_4 The MopB_CT_ 35.6 28 0.00061 29.5 2.3 24 181-206 34-57 (124)
464 cd00508 MopB_CT_Fdh-Nap-like T 35.4 29 0.00063 28.8 2.3 26 179-206 35-60 (120)
465 cd04721 BAH_plant_1 BAH, or Br 35.4 54 0.0012 28.7 4.0 43 249-314 8-52 (130)
466 cd04370 BAH BAH, or Bromo Adja 33.6 47 0.001 27.3 3.3 47 194-245 3-54 (123)
467 cd05764 Ig_2 Subgroup of the i 33.4 41 0.0009 25.2 2.7 43 252-294 1-46 (74)
468 cd02779 MopB_CT_Arsenite-Ox Th 32.7 37 0.00081 28.4 2.5 24 181-206 35-58 (115)
469 PF05257 CHAP: CHAP domain; I 32.7 61 0.0013 27.4 3.9 43 191-237 59-102 (124)
470 cd04717 BAH_polybromo BAH, or 32.6 29 0.00063 29.6 1.9 49 194-245 3-52 (121)
471 PF02237 BPL_C: Biotin protein 32.4 55 0.0012 23.4 3.0 33 197-231 2-34 (48)
472 cd04714 BAH_BAHCC1 BAH, or Bro 31.8 53 0.0012 28.2 3.4 46 194-244 3-51 (121)
473 cd05707 S1_Rrp5_repeat_sc11 S1 31.7 46 0.00099 24.9 2.6 44 213-259 5-55 (68)
474 cd02788 MopB_CT_NDH-1_NuoG2-N7 31.6 40 0.00086 27.5 2.4 58 180-244 30-89 (96)
475 PF10246 MRP-S35: Mitochondria 31.6 71 0.0015 27.1 3.9 55 208-266 23-80 (104)
476 PRK08559 nusG transcription an 31.0 83 0.0018 28.2 4.6 50 193-243 93-145 (153)
477 cd05852 Ig5_Contactin-1 Fifth 30.3 43 0.00092 25.7 2.3 43 252-295 1-46 (73)
478 cd02782 MopB_CT_1 The MopB_CT_ 30.2 1.1E+02 0.0023 26.0 5.0 25 180-206 34-58 (129)
479 PF14001 YdfZ: YdfZ protein 29.9 54 0.0012 25.4 2.7 27 248-289 9-35 (64)
480 PF14326 DUF4384: Domain of un 29.4 90 0.002 24.7 4.1 37 248-296 2-38 (83)
481 PF11623 DUF3252: Protein of u 29.2 90 0.0019 23.2 3.6 42 194-238 1-43 (53)
482 cd02776 MopB_CT_Nitrate-R-NarG 28.9 44 0.00096 29.5 2.4 24 181-206 33-56 (141)
483 PRK12696 flgH flagellar basal 28.7 57 0.0012 31.7 3.3 33 277-319 152-184 (236)
484 PF04319 NifZ: NifZ domain; I 28.4 46 0.001 26.6 2.2 39 193-231 3-60 (75)
485 cd04455 S1_NusA S1_NusA: N-uti 28.4 72 0.0016 24.1 3.2 44 213-259 8-51 (67)
486 COG5235 RFA2 Single-stranded D 28.3 73 0.0016 30.5 3.8 36 222-263 93-128 (258)
487 cd02775 MopB_CT Molybdopterin- 28.2 46 0.00099 26.5 2.2 27 179-207 23-49 (101)
488 PF02107 FlgH: Flagellar L-rin 28.2 48 0.001 30.6 2.6 32 277-318 96-127 (179)
489 PRK06955 biotin--protein ligas 28.0 50 0.0011 32.9 2.9 37 248-296 245-281 (300)
490 TIGR02768 TraA_Ti Ti-type conj 27.8 83 0.0018 35.5 4.9 41 248-296 607-647 (744)
491 smart00439 BAH Bromo adjacent 27.7 56 0.0012 27.0 2.8 27 195-221 2-29 (120)
492 PF05641 Agenet: Agenet domain 27.7 1.1E+02 0.0023 23.4 4.1 43 249-299 1-43 (68)
493 KOG2624 Triglyceride lipase-ch 27.7 8.5 0.00019 40.2 -2.7 76 259-339 300-381 (403)
494 PRK12697 flgH flagellar basal 27.6 62 0.0013 31.3 3.3 32 278-319 143-174 (226)
495 TIGR03689 pup_AAA proteasome A 27.6 1.8E+02 0.004 31.5 7.2 83 207-296 42-127 (512)
496 PRK09014 rfaH transcriptional 27.5 59 0.0013 29.0 3.0 50 194-244 109-160 (162)
497 PRK12699 flgH flagellar basal 27.0 64 0.0014 31.6 3.3 33 277-319 163-195 (246)
498 PF11604 CusF_Ec: Copper bindi 26.9 90 0.0019 24.2 3.6 48 214-261 1-55 (70)
499 TIGR00717 rpsA ribosomal prote 26.8 1.1E+02 0.0024 32.6 5.4 105 214-321 24-157 (516)
500 cd02791 MopB_CT_Nitrate-R-NapA 26.7 49 0.0011 27.6 2.2 24 181-206 37-60 (122)
No 1
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.50 E-value=1.2e-13 Score=140.41 Aligned_cols=98 Identities=29% Similarity=0.469 Sum_probs=89.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. ...|+.++||||||+++|||+||..||.+....+....+...+.++.+|..+++.+..|+.+||..||..
T Consensus 211 MAPEv~~~~-~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~ 289 (362)
T KOG0192|consen 211 MAPEVLRGE-KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSR 289 (362)
T ss_pred cChhhhcCC-CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCc
Confidence 899999943 2389999999999999999999999999998888888888888899999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhcccc
Q 015234 81 RPLMTDILRVFKSSQNSVH 99 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~ 99 (411)
||++.+++..|+.+.....
T Consensus 290 RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 290 RPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCHHHHHHHHHHHHHhhc
Confidence 9999999999988877653
No 2
>PHA02988 hypothetical protein; Provisional
Probab=99.50 E-value=6.2e-14 Score=136.12 Aligned_cols=94 Identities=18% Similarity=0.318 Sum_probs=82.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. ...|+.++|||||||++|||++|..||.+.+..++...+......++.|..+++.+.+|+.+||+.||.+
T Consensus 187 ~aPE~~~~~-~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 265 (283)
T PHA02988 187 FSYKMLNDI-FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIK 265 (283)
T ss_pred cCHHHhhhc-cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCccc
Confidence 689998752 2378999999999999999999999999988888887776666667777789999999999999999999
Q ss_pred CCCHHHHHHHHHhhh
Q 015234 81 RPLMTDILRVFKSSQ 95 (411)
Q Consensus 81 RPSa~eIL~~Le~l~ 95 (411)
||++.+++..|+.+.
T Consensus 266 Rps~~ell~~l~~~~ 280 (283)
T PHA02988 266 RPNIKEILYNLSLYK 280 (283)
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999887654
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.48 E-value=6.2e-14 Score=144.78 Aligned_cols=92 Identities=28% Similarity=0.493 Sum_probs=84.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+.. +.|+.++|||||||+||||+| |+.||.+++..+.+..+ ..+++.+.|..||+++.++|..||..+|+
T Consensus 371 tAPEa~~~---~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l-e~GyRlp~P~~CP~~vY~lM~~CW~~~P~ 446 (468)
T KOG0197|consen 371 TAPEALNY---GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL-ERGYRLPRPEGCPDEVYELMKSCWHEDPE 446 (468)
T ss_pred cCHHHHhh---CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH-hccCcCCCCCCCCHHHHHHHHHHhhCCcc
Confidence 59999985 489999999999999999999 99999999999999887 67889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||||+.+...|+.+..
T Consensus 447 ~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 447 DRPTFETLREVLEDFFT 463 (468)
T ss_pred cCCCHHHHHHHHHHhhh
Confidence 99999988888776554
No 4
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.48 E-value=5.1e-14 Score=145.67 Aligned_cols=107 Identities=21% Similarity=0.354 Sum_probs=91.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~DP 78 (411)
||||++.++ .|+..+|+||+|||+|||+.|.+||.+.++.+++.+|+........|. .+++++++||.+|++ ||
T Consensus 355 iAPEVll~k---gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~ 430 (550)
T KOG0605|consen 355 IAPEVLLGK---GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DP 430 (550)
T ss_pred cchHHHhcC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CH
Confidence 899999987 799999999999999999999999999999999999987765555554 478999999999999 99
Q ss_pred CCCCC---HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 79 RSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 79 ~~RPS---a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
.+|.. ++||. .+++|.+++|.++.... +|+.|.
T Consensus 431 ~~RLG~~G~~EIK------~HPfF~~v~W~~l~~~~--apfvP~ 466 (550)
T KOG0605|consen 431 ENRLGSKGAEEIK------KHPFFKGVDWDHLREMP--APFVPQ 466 (550)
T ss_pred HHhcCcccHHHHh------cCCccccCCcchhhcCC--CCCCCC
Confidence 99986 44443 55899999999987765 666665
No 5
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=4.5e-14 Score=149.52 Aligned_cols=108 Identities=20% Similarity=0.299 Sum_probs=98.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .|+..+|+|+|||+||||+.|..||.+.+.++++..|+.. .+.+|..++.++.++|.++|.++|.+
T Consensus 535 ~aPEil~e~---~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d--~~~yP~~ls~ea~~il~~ll~k~p~k 609 (694)
T KOG0694|consen 535 LAPEVLTEQ---SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND--EVRYPRFLSKEAIAIMRRLLRKNPEK 609 (694)
T ss_pred cChhhhccC---cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CCCCCCcccHHHHHHHHHHhccCccc
Confidence 899999986 8999999999999999999999999999999999999754 47789999999999999999999999
Q ss_pred CCCH-----HHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa-----~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|..+ ++|. .+++|...+|+.+..+.+.||+.|.
T Consensus 610 RLG~~e~d~~~i~------~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 610 RLGSGERDAEDIK------KHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred ccCCCCCCchhhh------hCCccccCCHHHHhhccCCCCCCcc
Confidence 9954 4444 4589999999999999999999988
No 6
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.45 E-value=7.2e-14 Score=139.13 Aligned_cols=110 Identities=23% Similarity=0.344 Sum_probs=95.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... +|+..+|+||+|+++|||++|.+||.+.+....+.+|.... .+..|..++.+++++++++|..||++
T Consensus 192 mAPEil~~~---gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~ 267 (357)
T KOG0598|consen 192 MAPEILLGK---GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQ 267 (357)
T ss_pred cChHHHhcC---CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHH
Confidence 899999976 89999999999999999999999999999999999997544 24445559999999999999999999
Q ss_pred CCC----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY 120 (411)
Q Consensus 81 RPS----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~~ 120 (411)
|.. +.+|. .+++|.+.+|..+..+...||+.|..
T Consensus 268 RLg~~~d~~~ik------~HpfF~~inW~~l~~k~l~PpF~P~~ 305 (357)
T KOG0598|consen 268 RLGGPGDAEEIK------RHPFFKGINWEKLLAKKLSPPFKPNV 305 (357)
T ss_pred hcCCCCChHHhh------cCcccccCCHHHHHhcCCCCCeecCC
Confidence 974 33332 45789999999999999999999983
No 7
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.43 E-value=1.5e-13 Score=148.35 Aligned_cols=93 Identities=25% Similarity=0.513 Sum_probs=84.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
|+||.+. |++|++++|||||||+|||+++ |++||.+.+.++.+..+. .+...+.|.+||.++++||..||+.+|.
T Consensus 672 MppEsIl---y~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~-~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 672 MPPESIL---YGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR-AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred CCHHHhh---cCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH-cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 8999998 5699999999999999999999 999999999999999885 4445888999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||+|+||-..|+.+...
T Consensus 748 ~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 748 RRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred cCCCHHHHHHHHHHHHhc
Confidence 999999999988866553
No 8
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.40 E-value=1.6e-13 Score=142.82 Aligned_cols=91 Identities=32% Similarity=0.448 Sum_probs=83.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... +.+.|+||||||++||||+||..||.+.+-..++.-+-.+...+++|..||+.++-|++.||...|++
T Consensus 278 MAPEvIrne---PcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRN 354 (904)
T KOG4721|consen 278 MAPEVIRNE---PCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRN 354 (904)
T ss_pred hCHHHhhcC---CcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCC
Confidence 899999987 88999999999999999999999999988877777776666778899999999999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 015234 81 RPLMTDILRVFKSS 94 (411)
Q Consensus 81 RPSa~eIL~~Le~l 94 (411)
||+|.+|+.||+-.
T Consensus 355 RPSFrqil~HldIa 368 (904)
T KOG4721|consen 355 RPSFRQILLHLDIA 368 (904)
T ss_pred CccHHHHHHHHhhc
Confidence 99999999987543
No 9
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.39 E-value=3e-13 Score=131.84 Aligned_cols=112 Identities=21% Similarity=0.299 Sum_probs=96.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||+++.+ +|+.++|+|+||+++|||++|.+||...++..++.+|+..+ ..+|+.+++++++|+..+|+.|-.+
T Consensus 208 LAPEii~sk---~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~--v~fP~~fs~~~kdLl~~LL~vD~t~ 282 (355)
T KOG0616|consen 208 LAPEIIQSK---GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK--VKFPSYFSSDAKDLLKKLLQVDLTK 282 (355)
T ss_pred cChHHhhcC---CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc--ccCCcccCHHHHHHHHHHHhhhhHh
Confidence 799999987 89999999999999999999999999999999999998665 5678999999999999999999999
Q ss_pred CC-CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|. +...-.+.++ .+++|.+.+|..+..+.+.+|+.|.
T Consensus 283 R~gnlknG~~dIk--~H~wF~~v~W~~i~~r~ie~P~~pp 320 (355)
T KOG0616|consen 283 RFGNLKNGVEDIK--NHPWFKGVDWEAILQRKIEPPFEPP 320 (355)
T ss_pred hhcCcCCCccccc--cCcccccccHHHHhhccccCCCCCc
Confidence 94 2221111222 4579999999999999999999874
No 10
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.39 E-value=6.1e-13 Score=134.34 Aligned_cols=108 Identities=20% Similarity=0.239 Sum_probs=91.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+|.|||.+|||+.|..||.+.+..+++..|+.+....+--+..+..+++||.++|.+||.+
T Consensus 302 lAPEvI~G~---GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 302 LAPEVIRGE---GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred ccceeeecC---CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 699999987 78999999999999999999999999999999999998665444433467889999999999999999
Q ss_pred CCC----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPS----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|.. +.||. .+++|.+..|. +-+...||..|.
T Consensus 379 Rlg~~rGA~eIK------~HpFF~gVnWa--Lir~~~PP~iP~ 413 (459)
T KOG0610|consen 379 RLGSKRGAAEIK------RHPFFEGVNWA--LIRCARPPEIPK 413 (459)
T ss_pred hhccccchHHhh------cCccccCCChh--heeccCCCcCCC
Confidence 997 55554 45899999999 445566777666
No 11
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.38 E-value=9.2e-13 Score=126.14 Aligned_cols=89 Identities=27% Similarity=0.517 Sum_probs=77.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+.+..++...+. ....+..|..++.++.+|+.+||+.||.
T Consensus 193 ~aPE~~~~~---~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~l~~~c~~~~p~ 268 (283)
T cd05048 193 MPPEAILYG---KFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR-SRQLLPCPEDCPARVYALMIECWNEIPA 268 (283)
T ss_pred cCHHHhccC---cCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCcccCCHHHHHHHHHHccCChh
Confidence 689988764 68899999999999999998 999999988888777664 4445566788999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.+|+++|++
T Consensus 269 ~Rp~~~~i~~~l~~ 282 (283)
T cd05048 269 RRPRFKDIHTRLRS 282 (283)
T ss_pred hCcCHHHHHHHHhc
Confidence 99999999999864
No 12
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.37 E-value=7.3e-13 Score=118.57 Aligned_cols=91 Identities=14% Similarity=0.158 Sum_probs=67.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCC-----CCCCCCCH--HHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIP-----PIPSGLPP--AVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei~~~Il~~~~~p-----~iP~~~p~--~l~~LI~~ 72 (411)
||||++.+. .|+.++|||||||++|||++|..||..... ......+....... ..+...+. .+.+++.+
T Consensus 71 ~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 147 (176)
T smart00750 71 MAPEVIQGQ---SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRV 147 (176)
T ss_pred cChHHhcCC---CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHH
Confidence 799999875 788999999999999999999999976533 23333332211111 11222333 68999999
Q ss_pred hhhhccCCCCCHHHHHHHHHhh
Q 015234 73 CFEYDLRSRPLMTDILRVFKSS 94 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le~l 94 (411)
||..+|.+||++.+++.++...
T Consensus 148 cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 148 CASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHhcccccccCHHHHHHHHHHH
Confidence 9999999999999999987544
No 13
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.36 E-value=1.5e-12 Score=128.81 Aligned_cols=93 Identities=20% Similarity=0.465 Sum_probs=76.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .|+.++|||||||++|||++ |..||.+....+...........+..|..+++.+.+++.+||+.||.
T Consensus 243 ~aPE~~~~~---~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 319 (338)
T cd05102 243 MAPESIFDK---VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPK 319 (338)
T ss_pred cCcHHhhcC---CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 689998765 78999999999999999997 99999876544333333344445556778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.++++.|+.+..
T Consensus 320 ~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 320 ERPTFSALVEILGDLLQ 336 (338)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987654
No 14
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.36 E-value=3e-12 Score=142.54 Aligned_cols=94 Identities=24% Similarity=0.387 Sum_probs=85.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .|+.++|||||||++||+++ |..||.+.+..+++..+++.+ +.+.|+.||..++++|..||+.+|+
T Consensus 871 m~PEsl~d~---iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe 946 (1025)
T KOG1095|consen 871 MPPESLKDG---IFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPE 946 (1025)
T ss_pred CCHHHHhhc---ccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChh
Confidence 899999964 89999999999999999999 999999999999988777666 7888999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccc
Q 015234 80 SRPLMTDILRVFKSSQNSV 98 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~ 98 (411)
+||+|..|++.+..+.+..
T Consensus 947 ~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 947 DRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred hCccHHHHHhhhhhhhhhh
Confidence 9999999999777666543
No 15
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=4.1e-13 Score=136.27 Aligned_cols=86 Identities=19% Similarity=0.387 Sum_probs=75.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++++. .|+.++||||||++.+||.+|.+|+....++..+..|- +..+|.+...+++.+++|+..||.+||+.
T Consensus 178 MAPEVI~~~---~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~~S~~~kEFV~~CL~k~P~~ 253 (467)
T KOG0201|consen 178 MAPEVIKQS---GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGDFSPPFKEFVEACLDKNPEF 253 (467)
T ss_pred cchhhhccc---cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccccCHHHHHHHHHHhhcCccc
Confidence 899999975 79999999999999999999999999998877666653 34445556679999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 254 RpsA~~LLKh 263 (467)
T KOG0201|consen 254 RPSAKELLKH 263 (467)
T ss_pred CcCHHHHhhh
Confidence 9999999985
No 16
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.35 E-value=1.5e-12 Score=129.97 Aligned_cols=86 Identities=27% Similarity=0.504 Sum_probs=77.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-----s~~ei~~~Il~~~~~p~iP~~-~p~~l~~LI~~CL 74 (411)
||||.+++. .|+.++||||||++++|+..|+.||... +..+++..|+. ...|.+|.. ++++++.|+..||
T Consensus 244 MsPERi~g~---~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV~~CL 319 (364)
T KOG0581|consen 244 MSPERISGE---SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFVSCCL 319 (364)
T ss_pred cChhhhcCC---cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHh
Confidence 899999986 8999999999999999999999999874 66788888874 456778887 9999999999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
++||.+||++.++++|
T Consensus 320 ~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 320 RKDPSERPSAKQLLQH 335 (364)
T ss_pred cCCcccCCCHHHHhcC
Confidence 9999999999999874
No 17
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.34 E-value=3.1e-12 Score=121.15 Aligned_cols=90 Identities=22% Similarity=0.391 Sum_probs=77.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||...+..++...+. ....++.|..+++++.+++.+||+.||+
T Consensus 165 ~aPE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~ 240 (257)
T cd05116 165 YAPECMNYY---KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-SGERMECPQRCPPEMYDLMKLCWTYGVD 240 (257)
T ss_pred cCHhHhccC---CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHhccCch
Confidence 689988654 67889999999999999998 999999887777777664 4445677888999999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+|...|+++
T Consensus 241 ~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 241 ERPGFAVVELRLRNY 255 (257)
T ss_pred hCcCHHHHHHHHhcc
Confidence 999999999888754
No 18
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.4e-12 Score=128.63 Aligned_cols=111 Identities=17% Similarity=0.344 Sum_probs=96.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .|+.++|+|.+|+++|||++|+.||.+.+...++..|+... ..+|..++++++.|+..+|.+||.+
T Consensus 335 LAPEVleDn---DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed--~kFPr~ls~eAktLLsGLL~kdP~k 409 (516)
T KOG0690|consen 335 LAPEVLEDN---DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED--LKFPRTLSPEAKTLLSGLLKKDPKK 409 (516)
T ss_pred cCchhhccc---cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh--ccCCccCCHHHHHHHHHHhhcChHh
Confidence 589999876 89999999999999999999999999999999999887655 5678999999999999999999999
Q ss_pred CCC--HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL--MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPS--a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|.. .++..+. +.+.+|...+|......++.||+.|.
T Consensus 410 RLGgGpdDakEi---~~h~FF~~v~W~~~~~Kki~PPfKPq 447 (516)
T KOG0690|consen 410 RLGGGPDDAKEI---MRHRFFASVDWEATYRKKIEPPFKPQ 447 (516)
T ss_pred hcCCCchhHHHH---HhhhhhccCCHHHHHHhccCCCCCCC
Confidence 973 2333222 24578999999999999999999998
No 19
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.33 E-value=3.2e-12 Score=132.68 Aligned_cols=99 Identities=18% Similarity=0.340 Sum_probs=88.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
.+||++... ..+..+|+|+|||++|.|++|.+||.+.+..-++++|+.-. ..+|...++.+.+|+.++|..||.+
T Consensus 254 VSPElL~~~---~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~--y~fp~~fp~~a~dLv~KLLv~dp~~ 328 (604)
T KOG0592|consen 254 VSPELLNDS---PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD--YEFPEGFPEDARDLIKKLLVRDPSD 328 (604)
T ss_pred cCHHHhcCC---CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc--ccCCCCCCHHHHHHHHHHHccCccc
Confidence 479999875 78899999999999999999999999999999999997544 6688999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSR 110 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r 110 (411)
|++..+|.+| ++|.+.+|..+...
T Consensus 329 Rlt~~qIk~H------pFF~~Vdw~nlw~~ 352 (604)
T KOG0592|consen 329 RLTSQQIKAH------PFFEGVDWENLWQQ 352 (604)
T ss_pred cccHHHHhhC------cccccCChhhhhhc
Confidence 9999888755 88999999985543
No 20
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.31 E-value=2e-12 Score=127.72 Aligned_cols=108 Identities=19% Similarity=0.366 Sum_probs=88.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .|+.++|+||+||++|||++|..||...+.......+... ...+|..+++++.+|+.+||+.||++
T Consensus 162 ~aPE~~~~~---~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05571 162 LAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred cChhhhcCC---CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 799999865 7899999999999999999999999988877777766533 35667889999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|| ++.++++ +++|....|.........++..+.
T Consensus 237 R~~~~~~~~~~ll~------h~~f~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05571 237 RLGGGPEDAKEIME------HRFFASINWQDVVQKKLEPPFKPQ 274 (323)
T ss_pred cCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence 99 6777764 367777788877766666665544
No 21
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.31 E-value=5.8e-12 Score=121.64 Aligned_cols=100 Identities=21% Similarity=0.445 Sum_probs=85.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+.+..+....+.. ...+..+..+++.+.+++.+||+.+|+
T Consensus 188 ~~pE~~~~~---~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~ 263 (288)
T cd05061 188 MAPESLKDG---VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD-GGYLDQPDNCPERVTDLMRMCWQFNPK 263 (288)
T ss_pred cCHHHhccC---CCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689988754 68899999999999999998 7899998887777766643 334456677889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccccCCCCC
Q 015234 80 SRPLMTDILRVFKSSQNSVHSDGGW 104 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~~~~~~w 104 (411)
+||++.++++.|++..++.|.+.+|
T Consensus 264 ~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 264 MRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 9999999999999988888888876
No 22
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=2.5e-12 Score=134.83 Aligned_cols=85 Identities=25% Similarity=0.490 Sum_probs=78.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++..+||||+||++|.|+.|++||...+..+++.+|.... ..+|..++.++++||.++|+.||.+
T Consensus 185 IAPEVl~k~---gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~--Y~~P~~ls~~A~dLI~~lL~~~P~~ 259 (592)
T KOG0575|consen 185 IAPEVLNKS---GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE--YSMPSHLSAEAKDLIRKLLRPNPSE 259 (592)
T ss_pred cChhHhccC---CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC--cccccccCHHHHHHHHHHhcCCccc
Confidence 599999965 79999999999999999999999999999999999996555 4578899999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
|||+++|+.+
T Consensus 260 Rpsl~~vL~h 269 (592)
T KOG0575|consen 260 RPSLDEVLDH 269 (592)
T ss_pred CCCHHHHhcC
Confidence 9999999974
No 23
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=2.6e-12 Score=133.74 Aligned_cols=87 Identities=23% Similarity=0.364 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++..+ .|+.++||||||++..||+.|++||...++...++.|...+. ....|..+++.+++|+.+||+.|+.
T Consensus 436 MAPEVvtrk---~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~ 512 (550)
T KOG0578|consen 436 MAPEVVTRK---PYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVE 512 (550)
T ss_pred cchhhhhhc---ccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchh
Confidence 899999976 899999999999999999999999999988888887754332 2244778999999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+|+++.+||+|
T Consensus 513 ~RasA~eLL~H 523 (550)
T KOG0578|consen 513 QRASAKELLEH 523 (550)
T ss_pred cCCCHHHHhcC
Confidence 99999999974
No 24
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.30 E-value=6.8e-12 Score=119.23 Aligned_cols=90 Identities=26% Similarity=0.573 Sum_probs=77.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++|||++ |..||.+.+..+....+ .....+..+..++..+.+++.+||+.+|+
T Consensus 172 ~aPE~~~~~---~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 247 (263)
T cd05052 172 TAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKGYRMERPEGCPPKVYELMRACWQWNPS 247 (263)
T ss_pred CCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHccCCcc
Confidence 589988754 68889999999999999998 99999988777766665 34445667788999999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 248 ~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 248 DRPSFAEIHQAFETM 262 (263)
T ss_pred cCCCHHHHHHHHHhh
Confidence 999999999988754
No 25
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.30 E-value=2.8e-12 Score=124.01 Aligned_cols=108 Identities=19% Similarity=0.297 Sum_probs=84.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~----ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++.+. .|+.++|+||+||++|||++|..||...+.. .....+. .....++..++..+.+|+.+||+.
T Consensus 168 ~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~l~~ 242 (285)
T cd05631 168 MAPEVINNE---KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK--EDQEEYSEKFSEDAKSICRMLLTK 242 (285)
T ss_pred cCHhhhcCC---CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh--cccccCCccCCHHHHHHHHHHhhc
Confidence 799999865 7899999999999999999999999875432 2222221 223445677899999999999999
Q ss_pred ccCCCCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 77 DP~~RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||.+||+ ++++++ ++++.+.+|..+..+...||+.|.
T Consensus 243 ~P~~R~~~~~~~~~~~~~------h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05631 243 NPKERLGCRGNGAAGVKQ------HPIFKNINFKRLEANMLEPPFCPD 284 (285)
T ss_pred CHHHhcCCCCCCHHHHhc------CHhhcCCCHHHHHhCcCCcCCCCC
Confidence 9999997 666664 356778888888888888887653
No 26
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.30 E-value=2.4e-12 Score=127.18 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=89.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||...+..+++..+... ....|..++.++.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~ 237 (320)
T cd05590 163 IAPEILQEM---LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLSQDAVDILKAFMTKNPTM 237 (320)
T ss_pred cCHHHHcCC---CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHH
Confidence 689999865 7889999999999999999999999998888887777533 34567789999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+++.++...-+-+.+++|....|..+..+...|++.+.
T Consensus 238 R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~ 276 (320)
T cd05590 238 RLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPR 276 (320)
T ss_pred CCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 999843221111224577888888877777777776655
No 27
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.30 E-value=6.7e-12 Score=119.77 Aligned_cols=88 Identities=28% Similarity=0.547 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||...+..+....+. .......+..++..+.+++.+||+.||+
T Consensus 191 ~aPE~~~~~---~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 191 MPPESIMYR---KFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred cChhhhccC---CcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 689998764 78899999999999999998 999998887777776664 3333445677899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 267 ~Rp~~~eil~~l~ 279 (280)
T cd05049 267 QRINIKDIHERLQ 279 (280)
T ss_pred cCCCHHHHHHHhh
Confidence 9999999998875
No 28
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.29 E-value=7.1e-12 Score=119.67 Aligned_cols=90 Identities=24% Similarity=0.441 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++||+++ |..||.+.+..+....+. ....++.|..++..+.+++..||+.+|.
T Consensus 175 ~aPE~~~~~---~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~ 250 (266)
T cd05064 175 AAPEAIQYH---HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE-DGFRLPAPRNCPNLLHQLMLDCWQKERG 250 (266)
T ss_pred cCHHHHhhC---CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCCch
Confidence 689988764 78899999999999999775 999999888777776653 4445567788999999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+|++.|.++
T Consensus 251 ~RP~~~~i~~~l~~~ 265 (266)
T cd05064 251 ERPRFSQIHSILSKM 265 (266)
T ss_pred hCCCHHHHHHHHHhh
Confidence 999999999887653
No 29
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.29 E-value=4.5e-12 Score=125.73 Aligned_cols=105 Identities=18% Similarity=0.304 Sum_probs=85.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+|||||++|||++|..||.+.+..+.+..+... .+.+|..++..+.+|+.+||+.||.+
T Consensus 182 ~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 256 (329)
T PTZ00263 182 LAPEVIQSK---GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLKFPNWFDGRARDLVKGLLQTDHTK 256 (329)
T ss_pred cCHHHHcCC---CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 699999865 6789999999999999999999999998888777777533 35677789999999999999999999
Q ss_pred CCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 015234 81 RPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS 116 (411)
Q Consensus 81 RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~ 116 (411)
|++ +.+++. +++|.+..|..+..+...+|.
T Consensus 257 R~~~~~~~~~~ll~------hp~f~~~~~~~~~~~~~~~~~ 291 (329)
T PTZ00263 257 RLGTLKGGVADVKN------HPYFHGANWDKLYARYYPAPI 291 (329)
T ss_pred cCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCCc
Confidence 996 466654 367777777776655554443
No 30
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.29 E-value=3.9e-12 Score=123.54 Aligned_cols=108 Identities=20% Similarity=0.233 Sum_probs=85.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|||||||++|+|++|..||.+.+..+....+... .+.+|..+++.+.+|+.+||+.||.+
T Consensus 165 ~aPE~~~~~---~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~ 239 (291)
T cd05612 165 LAPEVIQSK---GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEFPRHLDLYAKDLIKKLLVVDRTR 239 (291)
T ss_pred cCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCccCCHHHHHHHHHHcCCCHHH
Confidence 689998865 6889999999999999999999999998888877777543 35567788999999999999999999
Q ss_pred CCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|++ +.+++++ +++....|.....+...++..|.
T Consensus 240 R~~~~~~~~~~~l~h------~~~~~~~~~~~~~~~~~~~~~p~ 277 (291)
T cd05612 240 RLGNMKNGADDVKNH------RWFKSVDWDDVPQRKLKPPIVPK 277 (291)
T ss_pred ccCCccCCHHHHhcC------ccccCCCHHHHhcCCCCCCEeCC
Confidence 995 7776643 56666667665555555554433
No 31
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.29 E-value=4e-12 Score=125.45 Aligned_cols=112 Identities=19% Similarity=0.280 Sum_probs=89.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+|||||++|||++|..||.+.+..++...+... ...+|..++.++.+++.+||+.+|.+
T Consensus 168 ~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~l~~~p~~ 242 (323)
T cd05616 168 IAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGK 242 (323)
T ss_pred cCHHHhcCC---CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHcccCHHh
Confidence 689999865 7899999999999999999999999998888888777643 35567789999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|++.. +....+. .+.+|...+|.....+...+|..+.
T Consensus 243 R~~~~~~~~~~i~--~h~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05616 243 RLGCGPEGERDIK--EHAFFRYIDWEKLERKEVQPPYKPK 280 (323)
T ss_pred cCCCCCCCHHHHh--cCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 99752 1112221 4567788888888877777777655
No 32
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.28 E-value=7.6e-12 Score=119.99 Aligned_cols=88 Identities=26% Similarity=0.485 Sum_probs=75.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|||||||++|||++ |..||.+.+..+....+. ....+..|..++..+.+++.+||+.+|+
T Consensus 188 ~aPE~~~~~---~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~p~ 263 (277)
T cd05036 188 MPPEAFLDG---IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-GGGRLDPPKGCPGPVYRIMTDCWQHTPE 263 (277)
T ss_pred CCHHHHhcC---CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 689998754 68999999999999999997 999999888777666553 3344556778899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.+++++|+
T Consensus 264 ~Rps~~~vl~~l~ 276 (277)
T cd05036 264 DRPNFATILERIQ 276 (277)
T ss_pred cCcCHHHHHHHhh
Confidence 9999999999875
No 33
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.28 E-value=8.5e-12 Score=119.64 Aligned_cols=89 Identities=26% Similarity=0.566 Sum_probs=76.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+....+....+.. ....+.+..++..+.+++..||+.+|.
T Consensus 193 ~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~cl~~~p~ 268 (283)
T cd05091 193 MSPEAIMYG---KFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN-RQVLPCPDDCPAWVYTLMLECWNEFPS 268 (283)
T ss_pred cCHHHHhcC---CCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHhCCCcc
Confidence 689988754 68889999999999999998 8899998888777777643 334556788999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.+|+..|+.
T Consensus 269 ~RP~~~~i~~~l~~ 282 (283)
T cd05091 269 RRPRFKDIHSRLRT 282 (283)
T ss_pred cCCCHHHHHHHhhC
Confidence 99999999998764
No 34
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.28 E-value=1.2e-11 Score=117.11 Aligned_cols=90 Identities=23% Similarity=0.416 Sum_probs=77.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+.+..+....+. ....+..|..++..+.+++.+||+.||+
T Consensus 182 ~~pe~~~~~---~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 257 (273)
T cd05035 182 IAIESLADR---VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR-HGNRLKQPEDCLDELYDLMYSCWRADPK 257 (273)
T ss_pred cCHhhcccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCcCCCHHHHHHHHHHcCCChh
Confidence 578988654 68899999999999999999 999999888777776664 3445567788999999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 258 ~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 258 DRPTFTKLREVLENI 272 (273)
T ss_pred hCcCHHHHHHHHHhh
Confidence 999999999998754
No 35
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.28 E-value=1e-11 Score=120.57 Aligned_cols=94 Identities=20% Similarity=0.352 Sum_probs=79.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||...+..+....+. ....+..+..++..+.+|+.+||+.+|.
T Consensus 185 ~aPE~~~~~---~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 260 (297)
T cd05089 185 MAIESLNYS---VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRMEKPRNCDDEVYELMRQCWRDRPY 260 (297)
T ss_pred cCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689988764 68899999999999999997 999999888877777664 3444556778999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccc
Q 015234 80 SRPLMTDILRVFKSSQNSV 98 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~ 98 (411)
+||++.++++.|+.+....
T Consensus 261 ~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 261 ERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred hCcCHHHHHHHHHHHHHhh
Confidence 9999999999888776543
No 36
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=4.5e-12 Score=128.10 Aligned_cols=113 Identities=20% Similarity=0.300 Sum_probs=97.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++. |.+|+..+|+|++|++||||+.|++||++.+..++++.|...+ ..+|..++.++.+++...|.+.|.+
T Consensus 517 iAPEIi~---YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~k 591 (683)
T KOG0696|consen 517 IAPEIIA---YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPGK 591 (683)
T ss_pred cccceEE---ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc--CcCcccccHHHHHHHHHHhhcCCcc
Confidence 7999998 5599999999999999999999999999999999999997654 5678999999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY 120 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~~ 120 (411)
|.... +--+.+. .+++|...+|..++.+++.||+.|..
T Consensus 592 RLGcg~~ge~di~--~H~FFR~iDWek~E~~eiqPPfkPk~ 630 (683)
T KOG0696|consen 592 RLGCGPEGERDIR--EHPFFRRIDWEKLERREIQPPFKPKI 630 (683)
T ss_pred ccCCCCccccchh--hCcchhhccHHHHhhccCCCCCCCcc
Confidence 98432 1112222 45789999999999999999998873
No 37
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.27 E-value=5.7e-12 Score=124.40 Aligned_cols=108 Identities=22% Similarity=0.363 Sum_probs=86.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||...+..+....+... .+.+|..++.++.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~~ 237 (316)
T cd05619 163 IAPEILLGQ---KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREAKDILVKLFVREPER 237 (316)
T ss_pred cCHHHHcCC---CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhccCHhh
Confidence 689999865 7899999999999999999999999998887777766432 35567778999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++. +++ .++++...+|.....+...++..+.
T Consensus 238 R~~~~~~l~------~h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05619 238 RLGVKGDIR------QHPFFREIDWSALEEREIEPPFKPK 271 (316)
T ss_pred cCCChHHHH------cCcccCCCCHHHHHhCCCCCCcCCC
Confidence 99986 554 3366777777766666666665544
No 38
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.27 E-value=1.7e-12 Score=129.40 Aligned_cols=89 Identities=30% Similarity=0.526 Sum_probs=74.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~-~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .....++||||+||++.||+||.+||.. ....+....+......|.+|..+++++++|+.+|+..||.
T Consensus 188 maPEvi~~g--~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~ 265 (313)
T KOG0198|consen 188 MAPEVIRNG--EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPE 265 (313)
T ss_pred cCchhhcCC--CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcc
Confidence 899999841 1223599999999999999999999998 4555555566666667889999999999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+|||+.+++.+.
T Consensus 266 ~Rpta~eLL~hp 277 (313)
T KOG0198|consen 266 KRPTAEELLEHP 277 (313)
T ss_pred cCcCHHHHhhCh
Confidence 999999999863
No 39
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.27 E-value=1e-11 Score=123.89 Aligned_cols=93 Identities=20% Similarity=0.460 Sum_probs=76.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|||||||++|||++ |..||.+....+.+.........+..|..+++++.+++.+||+.+|+
T Consensus 242 ~aPE~~~~~---~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~ 318 (337)
T cd05054 242 MAPESIFDK---VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPE 318 (337)
T ss_pred cCcHHhcCC---CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChh
Confidence 689988765 78999999999999999998 99999875544444333344445556677889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+++++|+.+.+
T Consensus 319 ~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 319 DRPTFSELVEILGDLLQ 335 (337)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987654
No 40
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.27 E-value=6e-12 Score=132.29 Aligned_cols=92 Identities=27% Similarity=0.535 Sum_probs=83.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.++- ..++.++|+|-||+++||++. |..||.+....+.+..+ +++.+++.|+.||+.++.|+.+||.+||.
T Consensus 559 maPESINf---RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i-EnGeRlP~P~nCPp~LYslmskcWayeP~ 634 (974)
T KOG4257|consen 559 MAPESINF---RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI-ENGERLPCPPNCPPALYSLMSKCWAYEPS 634 (974)
T ss_pred cCccccch---hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-cCCCCCCCCCCCChHHHHHHHHHhccCcc
Confidence 89999984 589999999999999999988 99999998888877766 67889999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||.+.+|...|..+.+
T Consensus 635 kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 635 KRPRFTEIKAILSDVLQ 651 (974)
T ss_pred cCCcHHHHHHHHHHHHH
Confidence 99999999887766654
No 41
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.27 E-value=1.3e-11 Score=116.73 Aligned_cols=90 Identities=22% Similarity=0.477 Sum_probs=76.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|+|++ |..||...+..+....+. .....+.|..++..+.+++.+||..+|+
T Consensus 165 ~aPE~~~~~---~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~ 240 (257)
T cd05060 165 YAPECINYG---KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLE-SGERLPRPEECPQEIYSIMLSCWKYRPE 240 (257)
T ss_pred cCHHHhcCC---CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHhcCChh
Confidence 589988754 68899999999999999998 999999888777666653 3444566778899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 241 ~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 241 DRPTFSELESTFRRD 255 (257)
T ss_pred hCcCHHHHHHHHHhc
Confidence 999999999988754
No 42
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.27 E-value=1.3e-11 Score=121.87 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=85.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|||||||++|||++|..||...+.......+... ...+|..+++.+.+++.+||+.+|++
T Consensus 167 ~aPE~~~~~---~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~ 241 (323)
T cd05584 167 MAPEILMRS---GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG--KLNLPPYLTPEARDLLKKLLKRNPSS 241 (323)
T ss_pred cChhhccCC---CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHcccCHhH
Confidence 689999865 6788999999999999999999999998877777776533 35677889999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|| ++.+++.+ +++....|.........+++.+.
T Consensus 242 R~~~~~~~~~~l~~h------~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05584 242 RLGAGPGDAAEVQSH------PFFRHVNWDDLLARKVEPPFKPL 279 (323)
T ss_pred cCCCCCCCHHHHhcC------CCcCCCCHHHHhcCCCCCCcCCC
Confidence 99 67776643 56666666666555555544433
No 43
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.27 E-value=5.5e-12 Score=124.33 Aligned_cols=108 Identities=19% Similarity=0.310 Sum_probs=86.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|+|++|..||...+..+....+... .+.+|..++..+.+|+.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dP~~ 237 (318)
T cd05570 163 IAPEILSYQ---PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVRYPRWLSKEAKSILKSFLTKNPEK 237 (318)
T ss_pred cCHHHhcCC---CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHHHHHHccCCHHH
Confidence 689999865 7889999999999999999999999988877777766533 34567789999999999999999999
Q ss_pred CCCH-----HHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLM-----TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa-----~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++ .+++. ++++...+|.........++..+.
T Consensus 238 R~s~~~~~~~~ll~------~~~~~~~~~~~~~~~~~~~~~~~~ 275 (318)
T cd05570 238 RLGCLPTGEQDIKG------HPFFREIDWDKLERKEIKPPFKPK 275 (318)
T ss_pred cCCCCCCCHHHHhc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence 9998 66653 356666777665555555555444
No 44
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.27 E-value=8.9e-12 Score=123.02 Aligned_cols=108 Identities=21% Similarity=0.327 Sum_probs=85.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+|||||++|||++|..||.+.+..+....+.... +..|..++..+.+++.+||+.||.+
T Consensus 168 ~aPE~~~~~---~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~L~~dP~~ 242 (324)
T cd05589 168 LAPEVLTET---SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDE--VRYPRFLSREAISIMRRLLRRNPER 242 (324)
T ss_pred cCHhHhcCC---CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhhcCHhH
Confidence 799999865 68899999999999999999999999988888777775433 4567789999999999999999999
Q ss_pred CCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||+ +.+++ .+.+|....|.........++..+.
T Consensus 243 R~~~~~~~~~~l~------~~~~f~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd05589 243 RLGSGEKDAEDVK------KQPFFRDINWDDLLARKIKPPFVPT 280 (324)
T ss_pred cCCCCCCCHHHHh------hCCCcCCCCHHHHHhCCCCcCccCC
Confidence 995 44444 3456666667666555555555444
No 45
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.27 E-value=9.7e-12 Score=122.72 Aligned_cols=112 Identities=20% Similarity=0.339 Sum_probs=88.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+|||||++|||++|..||...+..+....+... ....+..++..+.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~ 237 (323)
T cd05575 163 LAPEVLRKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--PLRLKPNISVSARHLLEGLLQKDRTK 237 (323)
T ss_pred cChhhhcCC---CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHh
Confidence 689999865 7889999999999999999999999998888887777543 34556778999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++.+.+..+ +.++++....|..+......+++.+.
T Consensus 238 R~~~~~~~~~i--l~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05575 238 RLGAKDDFLEI--KNHVFFSSINWDDLVNKKITPPFNPN 274 (323)
T ss_pred CCCCCCCHHHH--HcCCCcCCCCHHHHhhccCCCCcCCC
Confidence 99875322221 24567777788777766666666555
No 46
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.27 E-value=5.4e-12 Score=124.39 Aligned_cols=108 Identities=17% Similarity=0.250 Sum_probs=87.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+||++|||++|..||...+..+.+..+.... ...|..++.++.+++.+||+.||++
T Consensus 163 ~aPE~~~~~---~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~ll~~~L~~dp~~ 237 (321)
T cd05591 163 IAPEILQEL---EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDD--VLYPVWLSKEAVSILKAFMTKNPNK 237 (321)
T ss_pred cCHHHHcCC---CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhccCHHH
Confidence 689998865 78899999999999999999999999998888888776433 4566778999999999999999999
Q ss_pred CC-------CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-------LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-------Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+ ++.++++ ++++...+|..+..+...+++.+.
T Consensus 238 R~~~~~~~~~~~~~~~------hp~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T cd05591 238 RLGCVASQGGEDAIKQ------HPFFKEIDWVLLEQRKIKPPFKPK 277 (321)
T ss_pred cCCCCCCCCCHHHHhc------CCccCCCCHHHHHhCCCCCCCCCC
Confidence 99 6666653 366777788777666666655443
No 47
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.26 E-value=1.3e-11 Score=119.26 Aligned_cols=93 Identities=23% Similarity=0.457 Sum_probs=78.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|+|++ |..||...+..+....+.. ...+..+..++.++.+|+.+||+.+|.
T Consensus 189 ~aPE~~~~~---~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~l~~li~~~l~~~p~ 264 (288)
T cd05093 189 MPPESIMYR---KFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ-GRVLQRPRTCPKEVYDLMLGCWQREPH 264 (288)
T ss_pred cCHHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHccCChh
Confidence 689998764 68899999999999999998 9999988877777766643 333455667889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.+++..|+.+...
T Consensus 265 ~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 265 MRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred hCCCHHHHHHHHHHHHHh
Confidence 999999999998877653
No 48
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.26 E-value=8.4e-12 Score=125.55 Aligned_cols=89 Identities=20% Similarity=0.300 Sum_probs=81.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
|+||.+..+ .|+.++|+||||+++|||++ |+.||...++.+....+ .++++...|-+||+++..+|..||...|+
T Consensus 465 MslEal~n~---~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl-kdGyRlaQP~NCPDeLf~vMacCWallpe 540 (563)
T KOG1024|consen 465 MSLEALQNS---HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL-KDGYRLAQPFNCPDELFTVMACCWALLPE 540 (563)
T ss_pred cCHHHHhhh---hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH-hccceecCCCCCcHHHHHHHHHHHhcCcc
Confidence 789999876 89999999999999999999 99999999999988766 57888999999999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||+++|+..-|..
T Consensus 541 eRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 541 ERPSFSQLVICLSE 554 (563)
T ss_pred cCCCHHHHHHHHHH
Confidence 99999999875543
No 49
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.26 E-value=1e-11 Score=125.82 Aligned_cols=92 Identities=22% Similarity=0.427 Sum_probs=76.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||..................+..|..+++++.+++.+||+.||.
T Consensus 281 ~aPE~~~~~---~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 357 (374)
T cd05106 281 MAPESIFDC---VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPT 357 (374)
T ss_pred eCHHHhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChh
Confidence 689998754 78999999999999999997 99999887554444444444455556677899999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+||++.++++.|+.+.
T Consensus 358 ~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 358 ERPTFSQISQLIQRQL 373 (374)
T ss_pred hCcCHHHHHHHHHHHh
Confidence 9999999999988653
No 50
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.26 E-value=1.4e-11 Score=119.20 Aligned_cols=92 Identities=24% Similarity=0.485 Sum_probs=77.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||...+..+....+. ....+..+..++..+.+++.+||+.+|.
T Consensus 192 ~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~ 267 (291)
T cd05094 192 MPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDIMLGCWQREPQ 267 (291)
T ss_pred cChHHhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-CCCCCCCCccCCHHHHHHHHHHcccChh
Confidence 689988765 68889999999999999998 999998887777666553 3444455667889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.++++.|+.+..
T Consensus 268 ~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 268 QRLNIKEIYKILHALGK 284 (291)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987755
No 51
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.26 E-value=1.4e-11 Score=116.65 Aligned_cols=89 Identities=22% Similarity=0.407 Sum_probs=74.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|+|++ |..||...........+. .....+.+..++.++.+++.+||..+|+
T Consensus 171 ~aPE~~~~~---~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 246 (261)
T cd05072 171 TAPEAINFG---SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ-RGYRMPRMENCPDELYDIMKTCWKEKAE 246 (261)
T ss_pred CCHHHhccC---CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHccCCcc
Confidence 689988754 67889999999999999998 999998887777666653 3344455567899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++.+.|++
T Consensus 247 ~Rp~~~~i~~~l~~ 260 (261)
T cd05072 247 ERPTFDYLQSVLDD 260 (261)
T ss_pred cCcCHHHHHHHHhc
Confidence 99999999998874
No 52
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.26 E-value=6e-12 Score=123.58 Aligned_cols=108 Identities=21% Similarity=0.351 Sum_probs=83.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||.+.+..+....+... ...+|..+++.+.+++.+||+.||.+
T Consensus 160 ~aPE~~~~~---~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~ 234 (312)
T cd05585 160 LAPELLLGH---GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTR 234 (312)
T ss_pred CCHHHHcCC---CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHH
Confidence 689999865 7899999999999999999999999998888877776543 35667889999999999999999999
Q ss_pred CCC---HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPS---a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||+ +.+++. ++++....|.........++..+.
T Consensus 235 R~~~~~~~e~l~------hp~~~~~~~~~~~~~~~~~~~~~~ 270 (312)
T cd05585 235 RLGYNGAQEIKN------HPFFSQLSWKKLLMKGIQPPFKPA 270 (312)
T ss_pred cCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence 986 455543 356666666554444444444433
No 53
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.26 E-value=1.3e-11 Score=118.15 Aligned_cols=92 Identities=21% Similarity=0.332 Sum_probs=77.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++||+++ |..||...+..++...+ .....+..+..+++.+.+++.+||..+|+
T Consensus 186 ~apE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 261 (280)
T cd05043 186 MALESLVNK---EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL-KDGYRLAQPINCPDELFAVMACCWALDPE 261 (280)
T ss_pred cCHHHHhcC---CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence 689988765 68899999999999999999 99999988777766554 34444555667899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+++..|+.+..
T Consensus 262 ~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 262 ERPSFSQLVQCLTDFHA 278 (280)
T ss_pred hCCCHHHHHHHHHHHHh
Confidence 99999999999887654
No 54
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.26 E-value=8.2e-12 Score=123.14 Aligned_cols=108 Identities=25% Similarity=0.426 Sum_probs=86.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||.+.+..++...+.. ..+.+|..++.++.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~ll~~~l~~~P~~ 237 (316)
T cd05592 163 IAPEILKGQ---KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRPHFPRWISKEAKDCLSKLFERDPTK 237 (316)
T ss_pred cCHHHHcCC---CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 689999865 688999999999999999999999999888877777643 346678889999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++. +++. +.++...+|.....+...+++.+.
T Consensus 238 R~~~~~~l~~------h~~~~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05592 238 RLGVDGDIRQ------HPFFRGIDWERLEKREIPPPFKPK 271 (316)
T ss_pred cCCChHHHHc------CcccCCCCHHHHHhCCCCCCcCCC
Confidence 99864 4433 356666677666555555555444
No 55
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.26 E-value=9.4e-12 Score=122.86 Aligned_cols=112 Identities=20% Similarity=0.291 Sum_probs=86.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||.+.+..+.+..+.. ..+.+|..++.++.+++.+||..||.+
T Consensus 168 ~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~l~~~P~~ 242 (324)
T cd05587 168 IAPEIIAYQ---PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME--HNVSYPKSLSKEAVSICKGLLTKHPAK 242 (324)
T ss_pred cChhhhcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 689999865 788999999999999999999999999888888877753 335667889999999999999999999
Q ss_pred CCCHHH-HHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTD-ILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~e-IL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|++... ..+.+. .+++|...+|..+..+...+++.+.
T Consensus 243 R~~~~~~~~~~~~--~hp~~~~~~~~~~~~~~~~~~~~~~ 280 (324)
T cd05587 243 RLGCGPTGERDIR--EHAFFRRIDWEKLERREIQPPFKPK 280 (324)
T ss_pred cCCCCCCCHHHHh--cCCCcCCCCHHHHHhCCCCCCccCc
Confidence 997521 112221 3467777788766665555555444
No 56
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.26 E-value=7.9e-12 Score=121.39 Aligned_cols=86 Identities=21% Similarity=0.468 Sum_probs=75.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-SGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP-~~~p~~l~~LI~~CL~~DP~ 79 (411)
|+||.+.+. +|+.++||||+||++|||+.-.+||.+.+..++..+|. ++..+++| ..++.++..|+..|+..||+
T Consensus 195 MSPE~i~~~---~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~-qgd~~~~p~~~YS~~l~~li~~ci~vd~~ 270 (375)
T KOG0591|consen 195 MSPERIHES---GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIE-QGDYPPLPDEHYSTDLRELINMCIAVDPE 270 (375)
T ss_pred cCHHHHhcC---CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHH-cCCCCCCcHHHhhhHHHHHHHHHccCCcc
Confidence 899999986 89999999999999999999999999999999988885 45556677 67999999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
.||+.-.++..
T Consensus 271 ~RP~t~~~v~d 281 (375)
T KOG0591|consen 271 QRPDTVPYVQD 281 (375)
T ss_pred cCCCcchHHHH
Confidence 99985444443
No 57
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.26 E-value=1.4e-11 Score=116.51 Aligned_cols=89 Identities=24% Similarity=0.450 Sum_probs=76.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||...+..+....+. ....+..+..+++.+.+++.+||+.+|+
T Consensus 166 ~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 241 (256)
T cd05082 166 TAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPVVYDVMKQCWHLDAA 241 (256)
T ss_pred cCHHHHccC---CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHhcCChh
Confidence 689988764 68889999999999999998 999998887777666653 3445566778999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++++.|+.
T Consensus 242 ~Rpt~~~l~~~l~~ 255 (256)
T cd05082 242 TRPSFLQLREQLEH 255 (256)
T ss_pred hCcCHHHHHHHHhc
Confidence 99999999988764
No 58
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.26 E-value=1.6e-11 Score=116.06 Aligned_cols=91 Identities=21% Similarity=0.350 Sum_probs=75.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |.+||...+..++...+. ....+..+..++..+.+++..||+.+|+
T Consensus 169 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~ 244 (262)
T cd05058 169 MALESLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL-QGRRLLQPEYCPDPLYEVMLSCWHPKPE 244 (262)
T ss_pred cChhHhccC---ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence 689988754 68889999999999999999 577787777766666553 3444555667889999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+||++.+++..|+++.
T Consensus 245 ~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 245 MRPTFSELVSRIEQIF 260 (262)
T ss_pred hCCCHHHHHHHHHHHh
Confidence 9999999999988764
No 59
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.26 E-value=1.7e-11 Score=116.18 Aligned_cols=89 Identities=25% Similarity=0.458 Sum_probs=75.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|+|++ |..||.+.+..+....+. ....++.+...+..+.+++.+||..+|+
T Consensus 170 ~aPE~~~~~---~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05070 170 TAPEAALYG---RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-RGYRMPCPQDCPISLHELMLQCWKKDPE 245 (260)
T ss_pred cChHHHhcC---CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcccCcc
Confidence 689988654 67889999999999999999 999999888777776653 3445566778899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+|||+.++.+.|+.
T Consensus 246 ~Rpt~~~l~~~l~~ 259 (260)
T cd05070 246 ERPTFEYLQSFLED 259 (260)
T ss_pred cCcCHHHHHHHHhc
Confidence 99999999888764
No 60
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.25 E-value=1.7e-11 Score=118.19 Aligned_cols=91 Identities=20% Similarity=0.370 Sum_probs=77.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++||+++ |..||...+..+....+. ....+..+..++..+.+|+.+||..+|.
T Consensus 201 ~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 276 (293)
T cd05053 201 MAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK-EGYRMEKPQNCTQELYHLMRDCWHEVPS 276 (293)
T ss_pred cCHHHhccC---CcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcc
Confidence 589988754 68899999999999999998 999999888777776653 4445566778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+|||+.++++.|+.+.
T Consensus 277 ~Rps~~eil~~l~~~~ 292 (293)
T cd05053 277 QRPTFKQLVEDLDRML 292 (293)
T ss_pred cCcCHHHHHHHHHHhh
Confidence 9999999999988654
No 61
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.25 E-value=3e-12 Score=122.28 Aligned_cols=87 Identities=25% Similarity=0.489 Sum_probs=72.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+... .++.++||||||+++||+++ |..||...+..++...+ .....+..+..++..+.+++..||..+|.
T Consensus 172 ~aPE~~~~~---~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~C~~~~p~ 247 (259)
T PF07714_consen 172 LAPEVLKDG---EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKDIYSLIQQCWSHDPE 247 (259)
T ss_dssp S-HHHHHHS---EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHHHHHHHHHHT-SSGG
T ss_pred ccccccccc---cccccccccccccccccccccccccccccccccccccc-cccccceeccchhHHHHHHHHHHcCCChh
Confidence 689998765 57899999999999999999 78999999888888777 45555667888999999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 248 ~RPs~~~i~~~L 259 (259)
T PF07714_consen 248 KRPSFQEILQEL 259 (259)
T ss_dssp GS--HHHHHHHH
T ss_pred hCcCHHHHHhcC
Confidence 999999998764
No 62
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.25 E-value=7.6e-12 Score=120.53 Aligned_cols=111 Identities=16% Similarity=0.205 Sum_probs=82.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~----~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++... .++.++|+||+||++|||++|..||..... .+.......... ......++.++.+|+.+||+.
T Consensus 161 ~aPE~~~~~---~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~ 236 (277)
T cd05607 161 MAPEILKEE---PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEV-KFEHQNFTEESKDICRLFLAK 236 (277)
T ss_pred cCHHHHccC---CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccc-ccccccCCHHHHHHHHHHhcc
Confidence 689998865 688999999999999999999999976432 233333322111 112246889999999999999
Q ss_pred ccCCCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS 117 (411)
Q Consensus 77 DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~s 117 (411)
||.+||++.++++.+. .+++|...+|..+.....++|+.
T Consensus 237 ~P~~R~~~~~~~~~~~--~h~~f~~~~~~~~~~~~~~~~~~ 275 (277)
T cd05607 237 KPEDRLGSREKNDDPR--KHEFFKTINFPRLEAGLIPPPFV 275 (277)
T ss_pred CHhhCCCCccchhhhh--cChhhcCCCHHHHhcCcCCCCCC
Confidence 9999999987765433 56677788887777766666654
No 63
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.25 E-value=1.6e-11 Score=124.47 Aligned_cols=91 Identities=23% Similarity=0.471 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||..................+..|...+.++.+|+..||+.||+
T Consensus 283 ~aPE~~~~~---~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 359 (375)
T cd05104 283 MAPESIFNC---VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPL 359 (375)
T ss_pred eChhHhcCC---CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 689999765 78999999999999999998 89999876554444444445545556677889999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|++.
T Consensus 360 ~RPs~~eil~~l~~~ 374 (375)
T cd05104 360 KRPTFKQIVQLIEQQ 374 (375)
T ss_pred HCcCHHHHHHHHHhh
Confidence 999999999998753
No 64
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.25 E-value=1.7e-11 Score=116.71 Aligned_cols=90 Identities=19% Similarity=0.387 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++||+++ |..||......+....+ .....+..|..+++++.+++.+||..+|+
T Consensus 165 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~c~~~~~~ 240 (257)
T cd05115 165 YAPECINFR---KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI-EQGKRLDCPAECPPEMYALMKDCWIYKWE 240 (257)
T ss_pred CCHHHHccC---CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689988754 67889999999999999996 99999988877776655 34455667788999999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++.+.|+.+
T Consensus 241 ~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 241 DRPNFAKVEERMRTY 255 (257)
T ss_pred hCcCHHHHHHHHhhh
Confidence 999999999887653
No 65
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.25 E-value=5.3e-12 Score=133.95 Aligned_cols=88 Identities=34% Similarity=0.532 Sum_probs=77.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... ...|+.++|||||||++.||.||++||... ++.....++..-+..|++|..++.+++++|.+|+..||.
T Consensus 743 MAPEvIDqG-~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~ 821 (1226)
T KOG4279|consen 743 MAPEVIDQG-PRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPC 821 (1226)
T ss_pred hChHhhccC-CcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcc
Confidence 899999876 346999999999999999999999999875 566666666555667899999999999999999999999
Q ss_pred CCCCHHHHHH
Q 015234 80 SRPLMTDILR 89 (411)
Q Consensus 80 ~RPSa~eIL~ 89 (411)
+||++.+++.
T Consensus 822 ~R~sA~~LL~ 831 (1226)
T KOG4279|consen 822 DRPSAKDLLQ 831 (1226)
T ss_pred cCccHHHhcc
Confidence 9999999986
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.25 E-value=1e-11 Score=122.78 Aligned_cols=108 Identities=18% Similarity=0.349 Sum_probs=85.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+|||||++|||++|..||...+.......+.... ..+|..+++++.+++.+||+.||.+
T Consensus 162 ~aPE~~~~~---~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~ 236 (323)
T cd05595 162 LAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQ 236 (323)
T ss_pred CCcccccCC---CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHccCCHHH
Confidence 799999765 78899999999999999999999999888777777665333 4567789999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+ ++.+++++ .+|.+..|.........+++.+.
T Consensus 237 R~~~~~~~~~~~l~h------~~~~~~~~~~~~~~~~~~~~~~~ 274 (323)
T cd05595 237 RLGGGPSDAKEVMEH------RFFLSINWQDVVQKKLLPPFKPQ 274 (323)
T ss_pred hCCCCCCCHHHHHcC------CCcCCCCHHHHHhCCCCCCcCCC
Confidence 98 67777654 56666677665555555555444
No 67
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.25 E-value=9.7e-12 Score=122.64 Aligned_cols=108 Identities=26% Similarity=0.403 Sum_probs=83.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||...+..++...+.. ..+.+|..++.++.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dP~~ 237 (316)
T cd05620 163 IAPEILQGL---KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV--DTPHYPRWITKESKDILEKLFERDPTR 237 (316)
T ss_pred cCHHHHcCC---CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHccCCHHH
Confidence 689999865 788999999999999999999999998887777766642 335667789999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+++. +++. +++|...+|..+......++..+.
T Consensus 238 R~~~~~~~~~------h~~f~~~~~~~~~~~~~~~~~~~~ 271 (316)
T cd05620 238 RLGVVGNIRG------HPFFKTINWTALEKRELDPPFKPK 271 (316)
T ss_pred cCCChHHHHc------CCCcCCCCHHHHHhCCCCCCcCCC
Confidence 99974 4543 356666666655444444444443
No 68
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.24 E-value=2e-11 Score=115.95 Aligned_cols=90 Identities=20% Similarity=0.363 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||......++...+. ....+..+..++..+.+++.+||+.+|+
T Consensus 181 ~~pe~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 256 (272)
T cd05075 181 IAIESLADR---VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-QGNRLKQPPDCLDGLYSLMSSCWLLNPK 256 (272)
T ss_pred CCHHHccCC---CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 578877654 67889999999999999999 899998877777766654 3444556678899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 257 ~Rps~~~l~~~l~~~ 271 (272)
T cd05075 257 DRPSFETLRCELEKA 271 (272)
T ss_pred cCcCHHHHHHHHHhh
Confidence 999999999988754
No 69
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.24 E-value=1.9e-11 Score=115.34 Aligned_cols=87 Identities=26% Similarity=0.451 Sum_probs=74.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||+|+++||+++|+.||...+.......+......+.+|..++..+.+++.+||..+|.+
T Consensus 174 ~aPE~~~~~---~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 250 (263)
T cd06625 174 MSPEVISGE---GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKK 250 (263)
T ss_pred cCcceeccC---CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCccc
Confidence 589999875 68899999999999999999999998876666555554444556677889999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 251 Rpt~~~ll~~ 260 (263)
T cd06625 251 RPSAEELLRH 260 (263)
T ss_pred CCCHHHHhhC
Confidence 9999999865
No 70
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.24 E-value=1.8e-11 Score=115.62 Aligned_cols=89 Identities=26% Similarity=0.489 Sum_probs=76.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|+|++ |..||...+..+.+..+. ....++.+..+++.+.+++.+||+.||.
T Consensus 171 ~~PE~~~~~---~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 246 (261)
T cd05148 171 TAPEAASHG---TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAKCPQEIYKIMLECWAAEPE 246 (261)
T ss_pred cCHHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCCCCHHHHHHHHHHcCCCch
Confidence 578988754 67889999999999999998 899999888777777664 3445666778999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++++.|+.
T Consensus 247 ~Rpt~~~l~~~L~~ 260 (261)
T cd05148 247 DRPSFKALREELDN 260 (261)
T ss_pred hCcCHHHHHHHHhc
Confidence 99999999998874
No 71
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.24 E-value=2.9e-11 Score=114.62 Aligned_cols=89 Identities=26% Similarity=0.472 Sum_probs=75.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+.......+. .....+.+..++..+.+++.+||+.+|.
T Consensus 171 ~aPE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~ 246 (261)
T cd05068 171 TAPEAALYN---RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD-QGYRMPCPPGCPKELYDIMLDCWKEDPD 246 (261)
T ss_pred cCccccccC---CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHhhcCcc
Confidence 689988754 68889999999999999999 999999888777776653 3344556677899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++...|+.
T Consensus 247 ~Rp~~~~l~~~l~~ 260 (261)
T cd05068 247 DRPTFETLQWKLED 260 (261)
T ss_pred cCCCHHHHHHHHhc
Confidence 99999999998864
No 72
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.24 E-value=2.9e-11 Score=118.71 Aligned_cols=93 Identities=24% Similarity=0.419 Sum_probs=78.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+..++... ......++.+..++..+.+++..||+.+|.
T Consensus 178 ~apE~~~~~---~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 253 (316)
T cd05108 178 MALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LEKGERLPQPPICTIDVYMIMVKCWMIDAD 253 (316)
T ss_pred cChHHhccC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhCCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 689988764 78899999999999999998 9999998877665543 345555666778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.+++..|..+...
T Consensus 254 ~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 254 SRPKFRELIIEFSKMARD 271 (316)
T ss_pred hCcCHHHHHHHHHHHHcC
Confidence 999999999988776654
No 73
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.24 E-value=2.2e-11 Score=116.95 Aligned_cols=89 Identities=27% Similarity=0.530 Sum_probs=75.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+...+...+. ....++.+..+++.+.+++..||+.||.
T Consensus 193 ~aPE~~~~~---~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~ 268 (283)
T cd05090 193 MPPEAIMYG---KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR-KRQLLPCSEDCPPRMYSLMTECWQEGPS 268 (283)
T ss_pred cChHHhccC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccCcc
Confidence 589988754 68899999999999999998 999998887766666553 3444566778999999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.+|++.|..
T Consensus 269 ~Rp~~~~i~~~l~~ 282 (283)
T cd05090 269 RRPRFKDIHTRLRS 282 (283)
T ss_pred cCcCHHHHHHHhhc
Confidence 99999999988753
No 74
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.24 E-value=1e-11 Score=124.31 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=89.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||+||++|||++|..||.+.+.......+.... ..+|..+++.+.+++.+||+.||.+
T Consensus 195 ~aPE~~~~~---~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~l~~dp~~ 269 (340)
T PTZ00426 195 IAPEILLNV---GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI--IYFPKFLDNNCKHLMKKLLSHDLTK 269 (340)
T ss_pred cCHHHHhCC---CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHHHHHHcccCHHH
Confidence 799999865 67899999999999999999999999988877777775432 4567788999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGY 120 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~~ 120 (411)
|+ +++++++ +++|...+|.....+...+|..|.+
T Consensus 270 R~~~~~~~~~~~~~------hp~f~~~~~~~~~~~~~~~~~~p~~ 308 (340)
T PTZ00426 270 RYGNLKKGAQNVKE------HPWFGNIDWVSLLHKNVEVPYKPKY 308 (340)
T ss_pred cCCCCCCCHHHHHc------CCCcCCCCHHHHHhCCCCCCcCCCC
Confidence 96 7777764 4677888888777777777766663
No 75
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.24 E-value=2.9e-11 Score=114.87 Aligned_cols=90 Identities=24% Similarity=0.452 Sum_probs=76.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .++.++|+||||+++|+|++ |..||......+....+. .....+.+..+++.+.+++.+||+.+|+
T Consensus 175 ~~Pe~~~~~---~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~ 250 (266)
T cd05033 175 TAPEAIAYR---KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE-DGYRLPPPMDCPSALYQLMLDCWQKDRN 250 (266)
T ss_pred cChhhhccC---CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 589988754 68899999999999999998 999998887777776664 3344556778899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+++++|+.+
T Consensus 251 ~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 251 ERPTFSQIVSTLDKM 265 (266)
T ss_pred cCcCHHHHHHHHHhh
Confidence 999999999998754
No 76
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.23 E-value=2e-11 Score=117.49 Aligned_cols=88 Identities=26% Similarity=0.474 Sum_probs=74.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++|||++ |.+||......+....+. ....+..+..+++.+.+++.+||+.||.
T Consensus 191 ~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 191 MPPESILYR---KFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT-QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred cCHHHhccC---CcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 589988765 68899999999999999998 999998877777666653 3334556778899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.+++..|+
T Consensus 267 ~Rp~~~~l~~~l~ 279 (280)
T cd05092 267 QRMVIKDIHSRLQ 279 (280)
T ss_pred hCCCHHHHHHHHh
Confidence 9999999998775
No 77
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.23 E-value=2.3e-11 Score=115.48 Aligned_cols=90 Identities=27% Similarity=0.465 Sum_probs=75.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++||+++ |..||...+..+....+. .....+.+..++..+.+++.+||+.+|+
T Consensus 177 ~~PE~~~~~---~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~c~~~~p~ 252 (268)
T cd05063 177 TAPEAIAYR---KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN-DGFRLPAPMDCPSAVYQLMLQCWQQDRA 252 (268)
T ss_pred cCHHHhhcC---CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 579988754 67899999999999999997 999998887777666664 3334455667899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+++
T Consensus 253 ~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 253 RRPRFVDIVNLLDKL 267 (268)
T ss_pred cCcCHHHHHHHHHhh
Confidence 999999999988754
No 78
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.23 E-value=2.4e-11 Score=117.36 Aligned_cols=92 Identities=21% Similarity=0.380 Sum_probs=78.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+....++...+ .....+..+..++.++.+++..||+.+|.
T Consensus 196 ~apE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~ 271 (290)
T cd05045 196 MAIESLFDH---IYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL-KTGYRMERPENCSEEMYNLMLTCWKQEPD 271 (290)
T ss_pred cCHHHHccC---CcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHccCCcc
Confidence 578887654 67889999999999999998 99999988877776654 34445566778999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.++++.|+++..
T Consensus 272 ~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 272 KRPTFADISKELEKMMV 288 (290)
T ss_pred cCCCHHHHHHHHHHHHh
Confidence 99999999999987654
No 79
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.23 E-value=1.2e-11 Score=122.80 Aligned_cols=108 Identities=20% Similarity=0.337 Sum_probs=85.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+||++|+|++|..||...+..+....+.. ....+|..+++++.+++.+||+.||.+
T Consensus 162 ~aPE~~~~~---~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~~~L~~dP~~ 236 (328)
T cd05593 162 LAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--EDIKFPRTLSADAKSLLSGLLIKDPNK 236 (328)
T ss_pred cChhhhcCC---CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc--CCccCCCCCCHHHHHHHHHHcCCCHHH
Confidence 689999865 788999999999999999999999998887777766643 235677889999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+ ++.+++++ .++.+..|.........++..+.
T Consensus 237 R~~~~~~~~~~il~h------~~~~~~~~~~~~~~~~~~~~~~~ 274 (328)
T cd05593 237 RLGGGPDDAKEIMRH------SFFTGVNWQDVYDKKLVPPFKPQ 274 (328)
T ss_pred cCCCCCCCHHHHhcC------CCcCCCCHHHHHhCCCCCCcCCc
Confidence 97 78887654 56666667655555545544433
No 80
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.23 E-value=2.6e-11 Score=114.57 Aligned_cols=87 Identities=24% Similarity=0.372 Sum_probs=74.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |+.||...+..+....+.. ...+..|...+..+.+++.+||+.+|+
T Consensus 168 ~aPE~~~~~---~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~ 243 (256)
T cd05114 168 SPPEVFNFS---KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR-GFRLYRPKLASMTVYEVMYSCWHEKPE 243 (256)
T ss_pred CChhhcccC---ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHccCCcc
Confidence 689998764 68889999999999999999 9999998887777777643 334445667888999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 244 ~Rps~~~l~~~l 255 (256)
T cd05114 244 GRPTFAELLRAI 255 (256)
T ss_pred cCcCHHHHHHhh
Confidence 999999998765
No 81
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.23 E-value=2.4e-11 Score=116.06 Aligned_cols=91 Identities=21% Similarity=0.385 Sum_probs=76.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+..+....+. .......+..++.++.+++.+||..+|.
T Consensus 178 ~apE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 253 (270)
T cd05047 178 MAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 253 (270)
T ss_pred CChHHHccC---CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh-CCCCCCCCCcCCHHHHHHHHHHcccChh
Confidence 589988754 68899999999999999997 999998887777666653 3344556667889999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+||++.+++..|+.+.
T Consensus 254 ~Rps~~~il~~l~~~~ 269 (270)
T cd05047 254 ERPSFAQILVSLNRML 269 (270)
T ss_pred hCCCHHHHHHHHHHhh
Confidence 9999999999987654
No 82
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.23 E-value=2.7e-11 Score=114.72 Aligned_cols=89 Identities=22% Similarity=0.413 Sum_probs=75.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++||+++ |..||.+.+..+....+ .....++.+..++.++.+++.+||..+|+
T Consensus 170 ~~pe~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05067 170 TAPEAINYG---TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL-ERGYRMPRPDNCPEELYELMRLCWKEKPE 245 (260)
T ss_pred cCHHHhccC---CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 578888754 67889999999999999999 99999988777666655 33445566777899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||+++++...|+.
T Consensus 246 ~Rp~~~~l~~~l~~ 259 (260)
T cd05067 246 ERPTFEYLRSVLED 259 (260)
T ss_pred hCCCHHHHHHHhhc
Confidence 99999999988764
No 83
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.23 E-value=2.6e-11 Score=115.03 Aligned_cols=88 Identities=25% Similarity=0.451 Sum_probs=74.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||...+..+....+. ....+..+..++..+.+++.+||..+|.
T Consensus 180 ~aPE~~~~~---~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 255 (269)
T cd05044 180 MAPESLLDG---KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRLQKPENCPDKIYQLMTNCWAQDPS 255 (269)
T ss_pred cCHHHHccC---CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCccCCcccchHHHHHHHHHHcCCCcc
Confidence 589988764 68899999999999999998 999998877766666553 3344556777899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 256 ~Rp~~~~i~~~l~ 268 (269)
T cd05044 256 ERPTFDRIQEILQ 268 (269)
T ss_pred cCCCHHHHHHHHh
Confidence 9999999998875
No 84
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.22 E-value=4.6e-12 Score=135.88 Aligned_cols=93 Identities=22% Similarity=0.432 Sum_probs=85.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
.|||.+. +++++.++|+||||++|||.++ |..||-+++.++.+..| +++++++.|.+||..+++||..||++|..
T Consensus 801 TAPEAIa---~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI-e~gyRLPpPmDCP~aL~qLMldCWqkdR~ 876 (996)
T KOG0196|consen 801 TAPEAIA---YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EQGYRLPPPMDCPAALYQLMLDCWQKDRN 876 (996)
T ss_pred cChhHhh---hcccCchhhccccceEEEEecccCCCcccccchHHHHHHH-HhccCCCCCCCCcHHHHHHHHHHHHHHhh
Confidence 4899998 4589999999999999999887 99999999999999988 67899999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||.|.+|+..|.++...
T Consensus 877 ~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 877 RRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred cCCCHHHHHHHHHHHhcC
Confidence 999999999999887754
No 85
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.22 E-value=2.3e-11 Score=115.92 Aligned_cols=88 Identities=27% Similarity=0.508 Sum_probs=75.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++||+++ |..||...+..+....+. ....+..|..++..+.+++.+||+.+|+
T Consensus 188 ~aPE~~~~~---~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 263 (277)
T cd05032 188 MAPESLKDG---VFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPK 263 (277)
T ss_pred cCHHHHhcC---CCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 589988754 67889999999999999998 999999888777776664 4445667788899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+|||+.+++..|+
T Consensus 264 ~Rpt~~~l~~~l~ 276 (277)
T cd05032 264 MRPTFLEIVSSLK 276 (277)
T ss_pred hCCCHHHHHHHhc
Confidence 9999999998875
No 86
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.22 E-value=2.6e-11 Score=116.13 Aligned_cols=88 Identities=24% Similarity=0.463 Sum_probs=74.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+.+..+....+.. ...+..+..++..+.+++.+||+.+|+
T Consensus 188 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~ 263 (277)
T cd05062 188 MSPESLKDG---VFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME-GGLLDKPDNCPDMLFELMRMCWQYNPK 263 (277)
T ss_pred cChhHhhcC---CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689998754 68899999999999999999 7899998887776666543 334556777899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 264 ~Rps~~e~l~~l~ 276 (277)
T cd05062 264 MRPSFLEIISSIK 276 (277)
T ss_pred hCcCHHHHHHHhh
Confidence 9999999998875
No 87
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.22 E-value=3.7e-11 Score=115.71 Aligned_cols=92 Identities=23% Similarity=0.390 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++||+++ |..||.+.........+ ..+..++.+..++..+.+++.+||..+|+
T Consensus 178 ~~pE~~~~~---~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~ 253 (279)
T cd05111 178 MALESILFG---RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERLAQPQICTIDVYMVMVKCWMIDEN 253 (279)
T ss_pred cCHHHhccC---CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 689988754 78899999999999999998 99999887766554444 44555566677888999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.++++.|..+..
T Consensus 254 ~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 254 VRPTFKELANEFTRMAR 270 (279)
T ss_pred cCcCHHHHHHHHHHHHh
Confidence 99999999998877654
No 88
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.22 E-value=3.2e-11 Score=117.90 Aligned_cols=91 Identities=23% Similarity=0.476 Sum_probs=75.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||+||++|||++ |..||......+...........+..+...++.+.+++.+||..+|+
T Consensus 210 ~aPE~~~~~---~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~ 286 (302)
T cd05055 210 MAPESIFNC---VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPL 286 (302)
T ss_pred CCHhhhccC---CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCch
Confidence 689988765 67889999999999999998 99999887665555444444444555667889999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+++
T Consensus 287 ~Rpt~~ell~~l~~~ 301 (302)
T cd05055 287 KRPTFKQIVQLIGKQ 301 (302)
T ss_pred hCcCHHHHHHHHHhh
Confidence 999999999988754
No 89
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.22 E-value=2.6e-11 Score=131.19 Aligned_cols=92 Identities=21% Similarity=0.442 Sum_probs=81.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s-~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||.+... .|+.++|+||||+++||+++ |..||.+.. ..+++. .++.+.+...|..|+.+++++|..||..+|
T Consensus 488 mApEsl~~~---~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p 563 (609)
T KOG0200|consen 488 MAPESLFDR---VFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKEGNRMEQPEHCSDEIYDLMKSCWNADP 563 (609)
T ss_pred cCHHHhccC---cccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHhCCCc
Confidence 899999875 89999999999999999999 999999876 566655 557888889999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhc
Q 015234 79 RSRPLMTDILRVFKSSQN 96 (411)
Q Consensus 79 ~~RPSa~eIL~~Le~l~~ 96 (411)
++||++.++...|+....
T Consensus 564 ~~RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 564 EDRPTFSECVEFFEKHLQ 581 (609)
T ss_pred ccCCCHHHHHHHHHHHHH
Confidence 999999999998887543
No 90
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.21 E-value=3.5e-11 Score=113.37 Aligned_cols=89 Identities=27% Similarity=0.495 Sum_probs=75.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++|||++ |..||...+..+....+.........+..++..+.+++.+||+.+|+
T Consensus 167 ~~pE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 243 (257)
T cd05040 167 CAPESLRTR---TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPA 243 (257)
T ss_pred cCHHHhccc---CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcc
Confidence 589988764 68889999999999999998 99999888877777766544444556677889999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|.
T Consensus 244 ~Rps~~~~~~~l~ 256 (257)
T cd05040 244 DRPTFAALREFLP 256 (257)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999988763
No 91
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.21 E-value=3.2e-11 Score=116.18 Aligned_cols=88 Identities=24% Similarity=0.442 Sum_probs=74.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.+.+..+....+. ....++.+..++.++.+++.+||+.+|.
T Consensus 199 ~aPE~~~~~---~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~ 274 (288)
T cd05050 199 MPPESIFYN---RYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR-DGNVLSCPDNCPLELYNLMRLCWSKLPS 274 (288)
T ss_pred cCHHHHhcC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence 579988754 68899999999999999998 889998888777776664 3333455677899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 275 ~Rpt~~el~~~l~ 287 (288)
T cd05050 275 DRPSFASINRILQ 287 (288)
T ss_pred cCCCHHHHHHHhh
Confidence 9999999998876
No 92
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.21 E-value=3.6e-11 Score=113.96 Aligned_cols=90 Identities=20% Similarity=0.413 Sum_probs=71.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPI-PSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s--~~ei~~~Il~~~~~p~i-P~~~p~~l~~LI~~CL~~D 77 (411)
||||++... .++.++|+||+|+++|||++|..||.... ..+....+. ....++. +..++..+.+++.+||+.+
T Consensus 173 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~ 248 (267)
T cd08228 173 MSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPD 248 (267)
T ss_pred cChhhhccC---CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCC
Confidence 689998764 67889999999999999999999997643 334444442 2223333 3457889999999999999
Q ss_pred cCCCCCHHHHHHHHHhh
Q 015234 78 LRSRPLMTDILRVFKSS 94 (411)
Q Consensus 78 P~~RPSa~eIL~~Le~l 94 (411)
|++||++.++++.|+++
T Consensus 249 p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 249 PDQRPDIGYVHQIAKQM 265 (267)
T ss_pred cccCcCHHHHHHHHHHh
Confidence 99999999999998765
No 93
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.20 E-value=3.7e-11 Score=114.00 Aligned_cols=89 Identities=26% Similarity=0.449 Sum_probs=74.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+....+....+. ....++.+...+..+.+++.+||..+|.
T Consensus 170 ~~Pe~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 245 (260)
T cd05069 170 TAPEAALYG---RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE-RGYRMPCPQGCPESLHELMKLCWKKDPD 245 (260)
T ss_pred CCHHHhccC---CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCcccCHHHHHHHHHHccCCcc
Confidence 578887654 67889999999999999999 999999887777666553 3444556777899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++++.|+.
T Consensus 246 ~Rp~~~~i~~~l~~ 259 (260)
T cd05069 246 ERPTFEYIQSFLED 259 (260)
T ss_pred cCcCHHHHHHHHhc
Confidence 99999999988764
No 94
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.20 E-value=4.2e-11 Score=114.82 Aligned_cols=92 Identities=24% Similarity=0.439 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||.......+...+ .....++.+..++..+.+++.+||+.||+
T Consensus 178 ~~PE~~~~~---~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 253 (279)
T cd05109 178 MALESILHR---RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGERLPQPPICTIDVYMIMVKCWMIDSE 253 (279)
T ss_pred CCHHHhccC---CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCccCCHHHHHHHHHHcCCChh
Confidence 689988754 68899999999999999998 99999887766665544 34445566777899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+++..|+.+..
T Consensus 254 ~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 254 CRPRFRELVDEFSRMAR 270 (279)
T ss_pred hCcCHHHHHHHHHHhhc
Confidence 99999999988876654
No 95
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.20 E-value=5.2e-11 Score=113.39 Aligned_cols=92 Identities=26% Similarity=0.522 Sum_probs=77.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++||+++ |..||...+..+....+. ....++.+..++..+.+++.+||..+|+
T Consensus 175 ~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~ 250 (270)
T cd05056 175 MAPESINFR---RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPS 250 (270)
T ss_pred cChhhhccC---CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 589988754 68899999999999999986 999999887776666553 4445567788999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+++..|+.+..
T Consensus 251 ~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 251 KRPRFTELKAQLSDILQ 267 (270)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999887654
No 96
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.20 E-value=3.5e-11 Score=112.48 Aligned_cols=87 Identities=25% Similarity=0.521 Sum_probs=75.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+... .++.++|+||+|+++|+|++ |..||...+..+....+.. ......+..++.++.+++.+||+.+|+
T Consensus 174 ~aPE~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~ 249 (262)
T cd00192 174 MAPESLKDG---IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GYRLPKPEYCPDELYELMLSCWQLDPE 249 (262)
T ss_pred cCHHHhccC---CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCCCCccCChHHHHHHHHHccCCcc
Confidence 689988764 68899999999999999999 6999999888777777643 445567788899999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.+++++|
T Consensus 250 ~Rps~~~l~~~l 261 (262)
T cd00192 250 DRPTFSELVERL 261 (262)
T ss_pred cCcCHHHHHHhh
Confidence 999999999876
No 97
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.20 E-value=2e-11 Score=118.01 Aligned_cols=109 Identities=20% Similarity=0.283 Sum_probs=82.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~--~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|+||+|+++|||++|..||.+.+.......+.. ......++..++..+.+|+.+||..||
T Consensus 168 ~aPE~~~~~---~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 244 (285)
T cd05605 168 MAPEVVKNE---RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDP 244 (285)
T ss_pred cCcHHhcCC---CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCH
Confidence 689998764 688999999999999999999999987654332222211 122344566789999999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 79 RSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 79 ~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
.+|| ++++++.+ +++...+|..+......||+.|
T Consensus 245 ~~R~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 245 GFRLGCRGEGAEEVKAH------PFFRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred HHhcCCCCCCHHHHhcC------cCccCCCHHHHhhCCCCCCCCC
Confidence 9999 77777543 6677777877776666666644
No 98
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.20 E-value=1.4e-11 Score=121.65 Aligned_cols=112 Identities=21% Similarity=0.345 Sum_probs=86.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++||||+||++|+|++|..||.+.+..+.+..+... ....++.++..+.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~ 237 (325)
T cd05602 163 LAPEVLHKQ---PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQLKPNITNSARHLLEGLLQKDRTK 237 (325)
T ss_pred cCHHHHcCC---CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CcCCCCCCCHHHHHHHHHHcccCHHH
Confidence 789999865 7889999999999999999999999998888777776543 24456678999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+++.+.+..+. .+.++...+|..+......++..+.
T Consensus 238 R~~~~~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (325)
T cd05602 238 RLGAKDDFMEIK--NHIFFSPINWDDLINKKITPPFNPN 274 (325)
T ss_pred CCCCCCCHHHHh--cCcccCCCCHHHHHhCCCCcCcCCC
Confidence 998775443322 3456666777776655555554433
No 99
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.20 E-value=2.2e-11 Score=117.50 Aligned_cols=107 Identities=21% Similarity=0.327 Sum_probs=80.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~----~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++.+. .++.++|+|||||++|||++|..||..... ......+. .....++..+++.+.+++.+||+.
T Consensus 164 ~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~ 238 (280)
T cd05608 164 MAPELLQGE---EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL--NDSVTYPDKFSPASKSFCEALLAK 238 (280)
T ss_pred cCHHHhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc--ccCCCCcccCCHHHHHHHHHHhcC
Confidence 689999865 788999999999999999999999986532 22222222 122345677899999999999999
Q ss_pred ccCCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 77 DP~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
||.+|| +++++++ +++|.+..|..+.....++|+.|
T Consensus 239 ~P~~R~~~~~~~~~~~l~------h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 239 DPEKRLGFRDGNCDGLRT------HPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred CHHHhcCCCCCCHHHHhc------ChhhhcCCHhHHhhccCCCCCCC
Confidence 999999 5566654 36667777777666666666654
No 100
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.20 E-value=9.6e-12 Score=130.55 Aligned_cols=96 Identities=31% Similarity=0.499 Sum_probs=80.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---PIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p---~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||+++.....+|+..+|||+|||++|||++|..||...+..+++..+.+.-..+ ..-.+++.++++|+..||.++
T Consensus 557 mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~ 636 (678)
T KOG0193|consen 557 MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFD 636 (678)
T ss_pred hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcC
Confidence 89999986655699999999999999999999999999888888877665442222 234568889999999999999
Q ss_pred cCCCCCHHHHHHHHHhhhc
Q 015234 78 LRSRPLMTDILRVFKSSQN 96 (411)
Q Consensus 78 P~~RPSa~eIL~~Le~l~~ 96 (411)
+++||.+.+|+..|+.+..
T Consensus 637 ~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 637 REERPLFPQLLSKLEELLP 655 (678)
T ss_pred cccCccHHHHHHHHHHhhh
Confidence 9999999999997776655
No 101
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.20 E-value=1.1e-11 Score=126.54 Aligned_cols=128 Identities=19% Similarity=0.262 Sum_probs=99.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~----s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++++. .|+...|+||+||++|||+.|..||... ..+++-..++.. ...++...++++++|+..+|++
T Consensus 353 MAPEvl~ne---~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~--~~ey~~kFS~eakslc~~LL~K 427 (591)
T KOG0986|consen 353 MAPEVLQNE---VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED--PEEYSDKFSEEAKSLCEGLLTK 427 (591)
T ss_pred cCHHHHcCC---cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc--hhhcccccCHHHHHHHHHHHcc
Confidence 899999986 7999999999999999999999999864 233444444432 3456788999999999999999
Q ss_pred ccCCCCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC-CCcccccccccccCCeee
Q 015234 77 DLRSRPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG-YTEWFLSKEDLKVDDVVR 137 (411)
Q Consensus 77 DP~~RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~-~s~~~lskd~lq~gd~vr 137 (411)
||.+|.... +-.+.++ .+++|.+.+|..+.....+||+.|. ..-++ +|.+..+++..
T Consensus 428 dp~~RLGcrg~ga~evk--~HpfFk~lnw~rleagml~PPfiPdp~aVya--kDv~DIeqFs~ 486 (591)
T KOG0986|consen 428 DPEKRLGCRGEGAQEVK--EHPFFKDLNWRRLEAGMLEPPFIPDPGAVYA--KDVLDIEQFST 486 (591)
T ss_pred CHHHhccCCCcCcchhh--hCcccccCCHhHHhccCCCCCCCCCccccch--hhhhhhhhccc
Confidence 999998543 2222222 5589999999999999999999988 44443 56666665543
No 102
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.20 E-value=4.4e-11 Score=116.76 Aligned_cols=93 Identities=20% Similarity=0.370 Sum_probs=78.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .++.++|+|||||++|||++ |..||...+..+....+ .....+..|..++.++.+++.+||..+|+
T Consensus 209 ~aPE~~~~~---~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 284 (307)
T cd05098 209 MAPEALFDR---IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPS 284 (307)
T ss_pred eChHHhccC---CCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcccChh
Confidence 689988764 67899999999999999998 88999887776666654 34444566778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.++++.|+.+...
T Consensus 285 ~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 285 QRPTFKQLVEDLDRILAL 302 (307)
T ss_pred hCcCHHHHHHHHHHHHHH
Confidence 999999999998876654
No 103
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.20 E-value=4.2e-11 Score=112.71 Aligned_cols=88 Identities=27% Similarity=0.445 Sum_probs=73.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .++.++|+||||+++|||++ |..||...+.......+. .......+..++..+.+++.+||+.+|+
T Consensus 163 ~aPE~~~~~---~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 238 (252)
T cd05084 163 TAPEALNYG---RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPELCPDAVYRLMERCWEYDPG 238 (252)
T ss_pred cCchhhcCC---CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCcccCCHHHHHHHHHHcCCChh
Confidence 589988764 68889999999999999998 999998877666555543 3344566777899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 239 ~Rps~~~~~~~l~ 251 (252)
T cd05084 239 QRPSFSTVHQELQ 251 (252)
T ss_pred hCcCHHHHHHHHh
Confidence 9999999998765
No 104
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.19 E-value=4.2e-11 Score=112.42 Aligned_cols=86 Identities=22% Similarity=0.448 Sum_probs=72.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||||+++|+|++|..||...+.......+.. ...+.++..++..+.+++.+||+.+|++
T Consensus 168 ~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 243 (256)
T cd08529 168 LSPELCEDK---PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR-GVFPPVSQMYSQQLAQLIDQCLTKDYRQ 243 (256)
T ss_pred cCHHHhcCC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCCCCccccCHHHHHHHHHHccCCccc
Confidence 589998865 678899999999999999999999998887776666643 3345566678899999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rp~~~~ll~~ 253 (256)
T cd08529 244 RPDTFQLLRN 253 (256)
T ss_pred CcCHHHHhhC
Confidence 9999998764
No 105
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.19 E-value=2.9e-11 Score=119.56 Aligned_cols=112 Identities=19% Similarity=0.291 Sum_probs=89.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+||++|||++|..||.+.+...+...+.... ..+|..++.++.+++.+||+.+|.+
T Consensus 168 ~aPE~~~~~---~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~~l~~~p~~ 242 (323)
T cd05615 168 IAPEIIAYQ---PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPKSLSKEAVSICKGLMTKHPSK 242 (323)
T ss_pred cCHHHHcCC---CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHHHHHHcccCHhh
Confidence 689998865 78899999999999999999999999988888777776433 4567788999999999999999999
Q ss_pred CCCHHH-HHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTD-ILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~e-IL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|++..+ ..+.+ ..+++|...+|.....+...+++.+.
T Consensus 243 R~~~~~~~~~~i--~~h~~f~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05615 243 RLGCGPEGERDI--REHAFFRRIDWDKLENREIQPPFKPK 280 (323)
T ss_pred CCCCCCCCHHHH--hcCcccCCCCHHHHhcCCCCcCccCc
Confidence 997532 22222 24567888888887777777777654
No 106
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.19 E-value=5.5e-11 Score=115.70 Aligned_cols=93 Identities=19% Similarity=0.349 Sum_probs=79.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .++.++|+||||+++|++++ |..||.+.+..++...+. .......+..++..+.+++.+||..+|.
T Consensus 206 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~ 281 (304)
T cd05101 206 MAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAIPS 281 (304)
T ss_pred eCchhhccC---CCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccChh
Confidence 689988764 68899999999999999998 889999888887777663 4444556778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.++++.|+.+...
T Consensus 282 ~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 282 HRPTFKQLVEDLDRILTL 299 (304)
T ss_pred hCCCHHHHHHHHHHHHHh
Confidence 999999999998876653
No 107
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.19 E-value=4.7e-11 Score=113.02 Aligned_cols=87 Identities=22% Similarity=0.369 Sum_probs=73.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .++.++|+||||+++|++++ |..||...+..+....+. ....+..|..++..+.+++.+||..+|+
T Consensus 168 ~~Pe~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~ 243 (256)
T cd05059 168 APPEVFDYS---RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYRPKLAPTEVYTIMYSCWHEKPE 243 (256)
T ss_pred cCHHHhccC---CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHhcCChh
Confidence 589988765 68889999999999999999 899998877777766653 3444566777899999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 244 ~Rpt~~~~l~~l 255 (256)
T cd05059 244 DRPAFKKLLSQL 255 (256)
T ss_pred hCcCHHHHHHHh
Confidence 999999998875
No 108
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.19 E-value=5.8e-11 Score=116.41 Aligned_cols=93 Identities=20% Similarity=0.373 Sum_probs=79.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+..+....+. ....+..+..++.++.+++.+||..+|.
T Consensus 203 ~aPE~~~~~---~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~ 278 (314)
T cd05099 203 MAPEALFDR---VYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR-EGHRMDKPSNCTHELYMLMRECWHAVPT 278 (314)
T ss_pred cCHHHHccC---CcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 689988764 68899999999999999999 899999888777776654 3444556778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.++++.|+.+...
T Consensus 279 ~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 279 QRPTFKQLVEALDKVLAA 296 (314)
T ss_pred cCcCHHHHHHHHHHHHHH
Confidence 999999999988877654
No 109
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.19 E-value=6.2e-11 Score=112.90 Aligned_cols=90 Identities=23% Similarity=0.412 Sum_probs=75.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||+.... .++.++|+||||+++|+|++ |..||.+....+....+. .....+.+..++..+.+++.+||+.+|+
T Consensus 170 ~~PE~~~~~---~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~ 245 (262)
T cd05071 170 TAPEAALYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPE 245 (262)
T ss_pred cCHhHhccC---CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh-cCCCCCCccccCHHHHHHHHHHccCCcc
Confidence 689987654 68899999999999999999 899998887777666553 3333455667899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 246 ~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 246 ERPTFEYLQAFLEDY 260 (262)
T ss_pred cCCCHHHHHHHHHHh
Confidence 999999999988754
No 110
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.18 E-value=5.5e-11 Score=113.22 Aligned_cols=90 Identities=22% Similarity=0.465 Sum_probs=75.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||+||++||+++ |..||...+..+....+. .....+.+..++..+.+++..||+.+|+
T Consensus 178 ~~PE~~~~~---~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 253 (269)
T cd05065 178 TAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRLPPPMDCPTALHQLMLDCWQKDRN 253 (269)
T ss_pred cCHhHhccC---cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCCCcccCCHHHHHHHHHHcCCChh
Confidence 589988754 78889999999999999886 999999887777766663 3444556678899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+++..|+.+
T Consensus 254 ~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 254 ARPKFGQIVSTLDKM 268 (269)
T ss_pred hCcCHHHHHHHHHhh
Confidence 999999999988754
No 111
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.18 E-value=6.5e-11 Score=111.16 Aligned_cols=88 Identities=24% Similarity=0.448 Sum_probs=73.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|||++ |..||...........+. ....++.+..++..+.+++.+||..+|.
T Consensus 162 ~~PE~~~~~---~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 237 (251)
T cd05041 162 TAPEALNYG---RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGYRMPAPQLCPEEIYRLMLQCWAYDPE 237 (251)
T ss_pred CChHhhccC---CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHhccChh
Confidence 579988754 68899999999999999999 899998877666665553 3344556778899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|+
T Consensus 238 ~Rp~~~ell~~l~ 250 (251)
T cd05041 238 NRPSFSEIYNELQ 250 (251)
T ss_pred hCcCHHHHHHHhh
Confidence 9999999998875
No 112
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.18 E-value=1e-11 Score=122.72 Aligned_cols=106 Identities=19% Similarity=0.347 Sum_probs=84.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+|||||++|||++|..||.+.+..+....+... ...+|..+++++.+++.+||+.||++
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~ 237 (325)
T cd05594 163 LAPEVLEDN---DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKSLLSGLLKKDPKQ 237 (325)
T ss_pred CCHHHHccC---CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhhcCHHH
Confidence 799999765 7889999999999999999999999988887777766432 35567889999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS 117 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~s 117 (411)
|+ ++.+++++ .++.+..|.........+++.
T Consensus 238 R~~~~~~~~~~il~h------~~~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd05594 238 RLGGGPDDAKEIMQH------KFFAGIVWQDVYEKKLVPPFK 273 (325)
T ss_pred hCCCCCCCHHHHhcC------CCcCCCCHHHHHhCCCCCCcC
Confidence 97 78887654 566666666555444444443
No 113
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.18 E-value=7.2e-11 Score=111.39 Aligned_cols=89 Identities=25% Similarity=0.444 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++||+++ |..||...+..++...+. ....+..+..+++.+.+++.+||..+|+
T Consensus 166 ~ape~~~~~---~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 241 (256)
T cd05039 166 TAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE-KGYRMEAPEGCPPEVYKVMKDCWELDPA 241 (256)
T ss_pred cCchhhcCC---cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-cCCCCCCccCCCHHHHHHHHHHhccChh
Confidence 589988754 67889999999999999997 999999887777666553 3444556777899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.+++..|++
T Consensus 242 ~Rp~~~~l~~~l~~ 255 (256)
T cd05039 242 KRPTFKQLREQLAL 255 (256)
T ss_pred hCcCHHHHHHHHhc
Confidence 99999999998864
No 114
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.18 E-value=5e-11 Score=116.48 Aligned_cols=93 Identities=20% Similarity=0.380 Sum_probs=76.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|||++ |..||...+..+....+. ....+..+..+++.+.+|+.+||+.+|+
T Consensus 190 ~aPE~~~~~---~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 190 MAIESLNYS---VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred cCHHHHhcc---CCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689988754 67889999999999999998 999998887776666552 3334455667889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||++.+++..|+.+...
T Consensus 266 ~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 266 ERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hCcCHHHHHHHHHHHHHh
Confidence 999999999988776554
No 115
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.18 E-value=2.9e-11 Score=114.00 Aligned_cols=86 Identities=27% Similarity=0.470 Sum_probs=73.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||||+++|+|++|..||...+.......+. .....+.+..++..+.+++.+||+.||++
T Consensus 167 ~aPE~~~~~---~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 242 (255)
T cd08219 167 VPPEIWENM---PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELRSLIKQMFKRNPRS 242 (255)
T ss_pred cCHHHHccC---CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHHhCCccc
Confidence 689998765 67889999999999999999999999887777666654 34445567778999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++..
T Consensus 243 Rp~~~~il~~ 252 (255)
T cd08219 243 RPSATTILSR 252 (255)
T ss_pred CCCHHHHhhc
Confidence 9999998753
No 116
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.18 E-value=6.6e-11 Score=111.07 Aligned_cols=88 Identities=24% Similarity=0.431 Sum_probs=73.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|++++ |..||...........+. .......+..++..+.+++.+||..+|+
T Consensus 161 ~aPE~~~~~---~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 236 (250)
T cd05085 161 TAPEALNYG---RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYKVMQRCWDYKPE 236 (250)
T ss_pred cCHHHhccC---CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence 589988754 67889999999999999998 999998887766666553 3444556777899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.++++.|.
T Consensus 237 ~Rp~~~~l~~~l~ 249 (250)
T cd05085 237 NRPKFSELQKELA 249 (250)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999988763
No 117
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.17 E-value=9.9e-12 Score=122.23 Aligned_cols=111 Identities=22% Similarity=0.295 Sum_probs=84.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+|||||++|||++|..||...+..+....+... ...+|..+++.+.+++.+||+.||.+
T Consensus 165 ~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~P~~ 239 (318)
T cd05582 165 MAPEVVNRR---GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSLLRALFKRNPAN 239 (318)
T ss_pred cCHHHHcCC---CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHhH
Confidence 689998865 6788999999999999999999999988887777776533 35567789999999999999999999
Q ss_pred CCCHHHH-HHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDI-LRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 81 RPSa~eI-L~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
||++.+. +..+ +.+.++...+|..+......++..+
T Consensus 240 R~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (318)
T cd05582 240 RLGAGPDGVEEI--KRHPFFSTIDWNKLYRREIKPPFKP 276 (318)
T ss_pred cCCCCCCCHHHH--hCCCCcCCCCHHHHHhcCCCCCcCC
Confidence 9996551 1221 1445666667766555555554443
No 118
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.17 E-value=4.3e-11 Score=118.46 Aligned_cols=98 Identities=21% Similarity=0.372 Sum_probs=76.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC------CCCCHHHHHHHHHhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP------SGLPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP------~~~p~~l~~LI~~CL 74 (411)
||||++.+. .++.++|+||+||++|||++|..||...+..+....+.........| ..+++++.+++.+||
T Consensus 165 ~aPE~~~~~---~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l 241 (333)
T cd05600 165 MAPEVLRGK---GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI 241 (333)
T ss_pred cChhHhcCC---CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHh
Confidence 689999865 78999999999999999999999999888877766654322222122 146899999999999
Q ss_pred hhccCCCCCHHHHHHHHHhhhccccCCCCCCCC
Q 015234 75 EYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
..+|.+||++.+++++ +++.+..|..+
T Consensus 242 ~~~~~rr~s~~~ll~h------~~~~~~~~~~~ 268 (333)
T cd05600 242 NDPSRRFGSLEDIKNH------PFFKEVDWNEL 268 (333)
T ss_pred hChhhhcCCHHHHHhC------cccCCCCHHHH
Confidence 9999999999998765 45555555443
No 119
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.17 E-value=3.8e-11 Score=114.85 Aligned_cols=87 Identities=16% Similarity=0.298 Sum_probs=78.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p--~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... +|+..+|||+.|+++|-++.|.+||.+.+...++..|....+.. +..+.+++++++|+.+||..||
T Consensus 179 maPEvvrkd---py~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP 255 (355)
T KOG0033|consen 179 LSPEVLKKD---PYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNP 255 (355)
T ss_pred cCHHHhhcC---CCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccCh
Confidence 899999976 89999999999999999999999999999999999987665443 3456799999999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+|.|+.|.+++
T Consensus 256 ~kRIta~EAL~H 267 (355)
T KOG0033|consen 256 KKRITADEALKH 267 (355)
T ss_pred hhhccHHHHhCC
Confidence 999999998864
No 120
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=4.7e-11 Score=126.48 Aligned_cols=86 Identities=21% Similarity=0.298 Sum_probs=77.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
.|||++.+..|. +.++||||+|||||.|++|.+||++.+...++.++.+.. +.+|..+++++.+|+.+|+..||..
T Consensus 178 A~PEIV~G~pYd--G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~--f~MPs~Is~eaQdLLr~ml~VDp~~ 253 (786)
T KOG0588|consen 178 AAPEIVSGRPYD--GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGV--FEMPSNISSEAQDLLRRMLDVDPST 253 (786)
T ss_pred CCchhhcCCCCC--CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCc--ccCCCcCCHHHHHHHHHHhccCccc
Confidence 389999987333 579999999999999999999999999999999986443 6788999999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
|.|+++|++|
T Consensus 254 RiT~~eI~kH 263 (786)
T KOG0588|consen 254 RITTEEILKH 263 (786)
T ss_pred cccHHHHhhC
Confidence 9999999885
No 121
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.17 E-value=5.8e-11 Score=116.96 Aligned_cols=112 Identities=23% Similarity=0.396 Sum_probs=85.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+|||||++|||++|..||...+.......+... ...+|...+..+.+++.+||+.||.+
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~ 237 (321)
T cd05603 163 LAPEVLRKE---PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--PLQLPGGKTVAACDLLVGLLHKDQRR 237 (321)
T ss_pred CCHHHhcCC---CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHccCCHhh
Confidence 689998765 7889999999999999999999999998887777776533 35567788999999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+++..-. ++-..+.++...+|..+......++..+.
T Consensus 238 R~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (321)
T cd05603 238 RLGAKADF--LEIKNHVFFSPINWDDLYHKRITPPYNPN 274 (321)
T ss_pred cCCCCCCH--HHHhCCCCcCCCCHHHHhcCCCCCCcCCC
Confidence 99764211 12224556777777766555555554443
No 122
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.17 E-value=8.6e-11 Score=111.46 Aligned_cols=89 Identities=27% Similarity=0.484 Sum_probs=74.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|++++ |..||...+.......+ ......+.+...+.++.+++.+||+.+|+
T Consensus 170 ~~PE~~~~~---~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 245 (260)
T cd05073 170 TAPEAINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIMMRCWKNRPE 245 (260)
T ss_pred cCHhHhccC---CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCCCcccCCHHHHHHHHHHcccCcc
Confidence 589988754 67889999999999999998 99999987776666655 34444555677889999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.+++..|+.
T Consensus 246 ~Rp~~~~l~~~L~~ 259 (260)
T cd05073 246 ERPTFEYIQSVLDD 259 (260)
T ss_pred cCcCHHHHHHHHhc
Confidence 99999999988764
No 123
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.17 E-value=6.6e-11 Score=111.43 Aligned_cols=87 Identities=21% Similarity=0.333 Sum_probs=72.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++.+. .++.++|+||+|+++|||++ |..||...........+. ....+..|...+..+.+|+.+||+.+|+
T Consensus 168 ~aPe~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~ 243 (256)
T cd05112 168 SSPEVFSFS---KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN-AGFRLYKPRLASQSVYELMQHCWKERPE 243 (256)
T ss_pred cCHhHhccC---CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHcccChh
Confidence 589988754 67889999999999999998 999998887777776653 3334445666889999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 244 ~Rp~~~~~l~~l 255 (256)
T cd05112 244 DRPSFSLLLHQL 255 (256)
T ss_pred hCCCHHHHHHhh
Confidence 999999998875
No 124
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.17 E-value=7.3e-11 Score=116.61 Aligned_cols=109 Identities=23% Similarity=0.334 Sum_probs=80.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~----s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++.+. ..++.++|||||||++|||++|..||... ........+. ...+.+|..+++.+.+++.+||+.
T Consensus 173 ~aPE~~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~ 248 (332)
T cd05614 173 MAPEIIRGK--GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGPEAQDLLHKLLRK 248 (332)
T ss_pred cCHHHhcCC--CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCHHHHHHHHHHcCC
Confidence 689998753 24678999999999999999999999743 2233333343 234567778999999999999999
Q ss_pred ccCCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 77 DP~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++|| ++.+++++ +++.+..|.........+++.+.
T Consensus 249 dp~~R~~~~~~~~~~~l~h------~~~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05614 249 DPKKRLGAGPQGASEIKEH------PFFKGLDWEALALRKVNPPFRPS 290 (332)
T ss_pred CHHHcCCCCCCCHHHHHcC------CCcCCCCHHHHHhCCCCCCcCCC
Confidence 999999 56666543 56666677666555555555444
No 125
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.17 E-value=1.9e-11 Score=120.67 Aligned_cols=112 Identities=21% Similarity=0.359 Sum_probs=86.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+|||||++|||++|..||...+..++...+.... ...++..+..+.+++.+|++.+|.+
T Consensus 163 ~aPE~~~~~---~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~ll~~~p~~ 237 (325)
T cd05604 163 LAPEVIRKQ---PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--LVLRPGASLTAWSILEELLEKDRQR 237 (325)
T ss_pred CCHHHHcCC---CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--ccCCCCCCHHHHHHHHHHhccCHHh
Confidence 799999865 78899999999999999999999999988888777775432 4455678899999999999999999
Q ss_pred CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
||++.+.+..+. .+++|....|.........++..+.
T Consensus 238 R~~~~~~~~~i~--~h~~f~~~~~~~~~~~~~~~~~~~~ 274 (325)
T cd05604 238 RLGAKEDFLEIQ--EHPFFESLSWTDLEQKKIPPPFNPN 274 (325)
T ss_pred cCCCCCCHHHHh--cCCCcCCCCHHHHHhCCCCCCcCCc
Confidence 998764433322 4567777777666555555555443
No 126
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.17 E-value=5.3e-11 Score=112.99 Aligned_cols=87 Identities=20% Similarity=0.284 Sum_probs=73.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|+|++ |..||...+..+....+. ....+..+...+..+.+++.+||+.+|.
T Consensus 168 ~~pe~~~~~---~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~ 243 (256)
T cd05113 168 SPPEVLLYS---KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS-QGLRLYRPHLASEKVYAIMYSCWHEKAE 243 (256)
T ss_pred CCHHHHhcC---cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 578888754 68889999999999999998 999998887777766664 3344455667889999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.+++..|
T Consensus 244 ~Rp~~~~ll~~~ 255 (256)
T cd05113 244 ERPTFQQLLSSI 255 (256)
T ss_pred cCCCHHHHHHhh
Confidence 999999998765
No 127
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.16 E-value=8.6e-11 Score=123.65 Aligned_cols=93 Identities=26% Similarity=0.536 Sum_probs=83.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
.|||-+. |..++.++|+|+||++|||+.| |..||.+.+..+.+..+ +++++..-|..||+.+++||..||+.+|.
T Consensus 433 TAPEsLA---yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL-EkgyRM~~PeGCPpkVYeLMraCW~WsPs 508 (1157)
T KOG4278|consen 433 TAPESLA---YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL-EKGYRMDGPEGCPPKVYELMRACWNWSPS 508 (1157)
T ss_pred cCccccc---ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH-hccccccCCCCCCHHHHHHHHHHhcCCcc
Confidence 4899887 4489999999999999999998 89999999988887754 78888999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhcc
Q 015234 80 SRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~ 97 (411)
+||+|.+|.+.|+.+.+.
T Consensus 509 DRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 509 DRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred cCccHHHHHHHHHHHhcc
Confidence 999999999999887653
No 128
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.16 E-value=8.3e-11 Score=111.10 Aligned_cols=89 Identities=25% Similarity=0.467 Sum_probs=75.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+.+. .++.++|+||+|+++|++++ |..||.+.+.......+. .....+.+...+.++.+++.+||+.+|.
T Consensus 171 ~~PE~~~~~---~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 246 (261)
T cd05034 171 TAPEAANYG---RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE-RGYRMPRPPNCPEELYDLMLQCWDKDPE 246 (261)
T ss_pred cCHHHhccC---CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccCcc
Confidence 578988754 67889999999999999998 999999887777777664 3444556777899999999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 015234 80 SRPLMTDILRVFKS 93 (411)
Q Consensus 80 ~RPSa~eIL~~Le~ 93 (411)
+||++.++...|+.
T Consensus 247 ~Rp~~~~l~~~l~~ 260 (261)
T cd05034 247 ERPTFEYLQSFLED 260 (261)
T ss_pred cCCCHHHHHHHHhc
Confidence 99999999988764
No 129
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.16 E-value=7.7e-11 Score=121.11 Aligned_cols=92 Identities=20% Similarity=0.352 Sum_probs=75.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .++.++|||||||++|||++ |..||..................++.+..++.++.+++.+||+.||+
T Consensus 306 ~aPE~~~~~---~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 382 (400)
T cd05105 306 MAPESIFDN---LYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPE 382 (400)
T ss_pred EChhhhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHh
Confidence 689998765 68899999999999999997 99999876544444333444555666778999999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+||++.++.+.|+++.
T Consensus 383 ~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 383 KRPSFLHLSDIVESLL 398 (400)
T ss_pred HCcCHHHHHHHHHHHc
Confidence 9999999999988654
No 130
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.15 E-value=8.6e-11 Score=111.37 Aligned_cols=91 Identities=21% Similarity=0.362 Sum_probs=70.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV--DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~--~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|+||||+++|+|++|..||..... .+....+......+..+..+++.+.+++.+||..+|
T Consensus 173 ~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 249 (267)
T cd08229 173 MSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDP 249 (267)
T ss_pred cCHHHhcCC---CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCc
Confidence 589988765 678899999999999999999999976532 333344432222222234588899999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 015234 79 RSRPLMTDILRVFKSS 94 (411)
Q Consensus 79 ~~RPSa~eIL~~Le~l 94 (411)
.+|||+.+|++.++++
T Consensus 250 ~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 250 EKRPDITYVYDVAKRM 265 (267)
T ss_pred ccCCCHHHHHHHHhhh
Confidence 9999999999887754
No 131
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.15 E-value=9.7e-11 Score=112.50 Aligned_cols=92 Identities=22% Similarity=0.425 Sum_probs=69.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH--H------------HHHHHHhcCCCCCCCCCCCHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--E------------IYDAVVRRQEIPPIPSGLPPAV 66 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~--e------------i~~~Il~~~~~p~iP~~~p~~l 66 (411)
||||++... .++.++|+||||+++|||++|..||...... + ...........++.+..++..+
T Consensus 177 ~~PE~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (283)
T cd05080 177 YAVECLKEN---KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEV 253 (283)
T ss_pred eCHhHhccc---CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHH
Confidence 589988754 6789999999999999999999998643210 0 0111112233344567789999
Q ss_pred HHHHHHhhhhccCCCCCHHHHHHHHHhhh
Q 015234 67 ENVLLGCFEYDLRSRPLMTDILRVFKSSQ 95 (411)
Q Consensus 67 ~~LI~~CL~~DP~~RPSa~eIL~~Le~l~ 95 (411)
.+++..||+.+|++||++.+++..|+.+.
T Consensus 254 ~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 254 YILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 99999999999999999999999887653
No 132
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.15 E-value=9.8e-11 Score=111.51 Aligned_cols=90 Identities=22% Similarity=0.461 Sum_probs=75.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++||+++ |..||...+..+....+. ....++.+..+++.+.+++.+||+.+|.
T Consensus 176 ~~pe~~~~~---~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 251 (267)
T cd05066 176 TAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRLPAPMDCPAALHQLMLDCWQKDRN 251 (267)
T ss_pred cCHhHhccC---ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-CCCcCCCCCCCCHHHHHHHHHHcccCch
Confidence 589988754 68899999999999999887 999999887776666654 3344555667899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.++++.|+.+
T Consensus 252 ~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 252 ERPKFEQIVSILDKL 266 (267)
T ss_pred hCCCHHHHHHHHHhh
Confidence 999999999988754
No 133
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.15 E-value=1.1e-10 Score=115.69 Aligned_cols=92 Identities=20% Similarity=0.370 Sum_probs=78.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||.+.+..+....+. ....+..+..++..+.+++.+||+.+|.
T Consensus 203 ~aPE~~~~~---~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~ 278 (334)
T cd05100 203 MAPEALFDR---VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK-EGHRMDKPANCTHELYMIMRECWHAVPS 278 (334)
T ss_pred cCHHHhccC---CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcccChh
Confidence 689998764 68889999999999999998 899999888777776664 3444566778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+++..|+.+..
T Consensus 279 ~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 279 QRPTFKQLVEDLDRVLT 295 (334)
T ss_pred hCcCHHHHHHHHHHHhh
Confidence 99999999999887764
No 134
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.15 E-value=7.6e-11 Score=112.52 Aligned_cols=86 Identities=19% Similarity=0.367 Sum_probs=70.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~-~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+.......+. ....+..+.. ++..+.+++.+||..+|+
T Consensus 165 ~~PE~~~~~---~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~p~ 240 (274)
T cd06609 165 MAPEVIKQS---GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIP-KNNPPSLEGNKFSKPFKDFVSLCLNKDPK 240 (274)
T ss_pred cChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhh-hcCCCCCcccccCHHHHHHHHHHhhCChh
Confidence 589998865 58899999999999999999999998877666555543 2333444444 889999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++++++.+
T Consensus 241 ~Rpt~~~il~~ 251 (274)
T cd06609 241 ERPSAKELLKH 251 (274)
T ss_pred hCcCHHHHhhC
Confidence 99999999863
No 135
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.15 E-value=7.6e-11 Score=112.03 Aligned_cols=90 Identities=19% Similarity=0.332 Sum_probs=69.0
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||++.... ...|+.++|+||+||++|||++|..||...........+.........+..++..+.+|+.+||..+|
T Consensus 178 ~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 257 (272)
T cd06637 178 MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNH 257 (272)
T ss_pred cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCCh
Confidence 5899886321 22578899999999999999999999987665554444433322233345678899999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+||++.+++++
T Consensus 258 ~~Rpt~~~il~~ 269 (272)
T cd06637 258 SQRPTTEQLMKH 269 (272)
T ss_pred hhCCCHHHHhhC
Confidence 999999998764
No 136
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.15 E-value=1.3e-10 Score=113.47 Aligned_cols=94 Identities=27% Similarity=0.410 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++||+++ |..||.+....+....+ .....++.+..++..+.+++..||..+|+
T Consensus 178 ~~PE~~~~~---~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~ 253 (303)
T cd05110 178 MALECIHYR---KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLPQPPICTIDVYMVMVKCWMIDAD 253 (303)
T ss_pred CCHHHhccC---CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 688988754 68889999999999999997 89999887655554443 44555556677889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccc
Q 015234 80 SRPLMTDILRVFKSSQNSV 98 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~ 98 (411)
+||++.++++.|..+....
T Consensus 254 ~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 254 SRPKFKELAAEFSRMARDP 272 (303)
T ss_pred hCcCHHHHHHHHHHHHhch
Confidence 9999999999988766543
No 137
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.15 E-value=2.4e-11 Score=116.27 Aligned_cols=93 Identities=23% Similarity=0.336 Sum_probs=71.1
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s--~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
|||.+..+.....+.++|||||||++|+|+.|..||.... ...+...+.......+-...+++.+.++++.|++.||.
T Consensus 206 APELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~ 285 (302)
T KOG2345|consen 206 APELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPN 285 (302)
T ss_pred CchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcc
Confidence 8999998877788999999999999999999999997421 11111122222222222334899999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+++..++.+
T Consensus 286 qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 286 QRPTIPELLSKLDDL 300 (302)
T ss_pred cCCCHHHHHHHHHhh
Confidence 999999999887754
No 138
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.14 E-value=9e-11 Score=110.41 Aligned_cols=86 Identities=22% Similarity=0.556 Sum_probs=72.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+|+++|+|++|..||...+.......+.. ...+..+..+++.+.+++.+||+.+|.+
T Consensus 169 ~aPE~~~~~---~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~ 244 (257)
T cd08223 169 MSPELFSNK---PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE-GKLPPMPKDYSPELGELIATMLSKRPEK 244 (257)
T ss_pred cChhHhcCC---CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh-cCCCCCccccCHHHHHHHHHHhccCccc
Confidence 689998764 678899999999999999999999988776666555543 3334566778999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 245 Rp~~~~~l~~ 254 (257)
T cd08223 245 RPSVKSILRQ 254 (257)
T ss_pred CCCHHHHhcC
Confidence 9999998764
No 139
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.14 E-value=1.1e-10 Score=111.07 Aligned_cols=90 Identities=20% Similarity=0.399 Sum_probs=74.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
|+||.+... .++.++|+|||||++|||++ |.+||...+..+....+. ....+..+..++..+.+++.+||+.+|+
T Consensus 182 ~~pe~~~~~---~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~ 257 (273)
T cd05074 182 LALESLADN---VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI-KGNRLKQPPDCLEDVYELMCQCWSPEPK 257 (273)
T ss_pred cCHhHHhcC---ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 568877654 67889999999999999999 899998887776666554 2333445667889999999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 015234 80 SRPLMTDILRVFKSS 94 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l 94 (411)
+||++.+++..|+.+
T Consensus 258 ~Rps~~~~~~~l~~~ 272 (273)
T cd05074 258 CRPSFQHLRDQLELI 272 (273)
T ss_pred hCcCHHHHHHHHHhh
Confidence 999999999998754
No 140
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.14 E-value=1.3e-10 Score=111.48 Aligned_cols=92 Identities=27% Similarity=0.435 Sum_probs=78.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .++.++|+||||+++||+++ |..||...+..++...+. .....+.|..++..+.+++.+||..+|.
T Consensus 178 ~~PE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~ 253 (279)
T cd05057 178 MALESILHR---IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE-KGERLPQPPICTIDVYMVLVKCWMIDAE 253 (279)
T ss_pred cCHHHhhcC---CcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 688988654 67889999999999999998 999999988887777664 4445566777889999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.++++.|+++..
T Consensus 254 ~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 254 SRPTFKELINEFSKMAR 270 (279)
T ss_pred hCCCHHHHHHHHHHHHh
Confidence 99999999999887755
No 141
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.14 E-value=5.6e-11 Score=114.38 Aligned_cols=87 Identities=18% Similarity=0.281 Sum_probs=68.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
||||++... .++.++|+||+||++|||++|.+||.+.+..+.+..+......+
T Consensus 176 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (290)
T cd07862 176 RAPEVLLQS---SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPI 252 (290)
T ss_pred cChHHHhCC---CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCH
Confidence 689998764 78899999999999999999999999887666655554211100
Q ss_pred -CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 -~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+.+.+++.+.+++.+||+.||++||++.+++++
T Consensus 253 ~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 253 EKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred HHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 0113467888999999999999999999999854
No 142
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=7.1e-11 Score=122.05 Aligned_cols=114 Identities=20% Similarity=0.286 Sum_probs=100.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
.|||++.++ .++.++|.|+||+++|||++|.+||.+.++..+++.|++.-....+|..++..+.+|+.+++..+|..
T Consensus 586 VAPEIILnK---GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~E 662 (732)
T KOG0614|consen 586 VAPEIILNK---GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTE 662 (732)
T ss_pred ccchhhhcc---CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHh
Confidence 489999987 78999999999999999999999999999999999998877777889999999999999999999999
Q ss_pred CCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCCCCcc
Q 015234 81 RPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSGYTEW 123 (411)
Q Consensus 81 RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~~s~~ 123 (411)
|.. ..+|. .+.+|.+-+|..+..+.++||+.|+..++
T Consensus 663 RLG~~~~gI~DIk------kH~Wf~gfdweglr~~~L~pPi~~~va~p 704 (732)
T KOG0614|consen 663 RLGYQKGGINDIK------KHRWFEGFDWEGLRSRTLPPPIIPSVANP 704 (732)
T ss_pred hhccccCChHHHH------hhhhhhcCChhhhhhccCCCCccccCCCc
Confidence 985 33343 33688999999999999999999886655
No 143
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.14 E-value=7.1e-11 Score=117.08 Aligned_cols=98 Identities=21% Similarity=0.398 Sum_probs=77.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~DP 78 (411)
||||++.+. .++.++|||||||++|||++|..||...+.......+........+| ..+++++.+++.+|+. ||
T Consensus 197 ~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp 272 (350)
T cd05573 197 IAPEVLRGT---PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DP 272 (350)
T ss_pred cCHHHHcCC---CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-Ch
Confidence 689999875 78999999999999999999999999988777777665422223333 3369999999999998 99
Q ss_pred CCCCC-HHHHHHHHHhhhccccCCCCCCCCC
Q 015234 79 RSRPL-MTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 79 ~~RPS-a~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
.+|++ +.+++++ +++.+.+|....
T Consensus 273 ~~R~~s~~~ll~h------p~~~~~~~~~~~ 297 (350)
T cd05573 273 EDRLGSFEEIKSH------PFFKGIDWENLR 297 (350)
T ss_pred hhcCCCHHHHhcC------CCcCCCCHHHHh
Confidence 99999 9998754 566666665544
No 144
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.14 E-value=1e-10 Score=110.32 Aligned_cols=88 Identities=23% Similarity=0.433 Sum_probs=74.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|||++ |..||...+..+....+. ....+..+..+++.+.+++.+||+.+|+
T Consensus 164 ~~pe~~~~~---~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 239 (254)
T cd05083 164 TAPEALKHK---KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-KGYRMEPPEGCPADVYVLMTSCWETEPK 239 (254)
T ss_pred cCHHHhccC---CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-CCCCCCCCCcCCHHHHHHHHHHcCCChh
Confidence 589988754 68889999999999999998 999999888777666553 3444555677899999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.+++..|+
T Consensus 240 ~Rp~~~~l~~~l~ 252 (254)
T cd05083 240 KRPSFHKLREKLE 252 (254)
T ss_pred hCcCHHHHHHHHc
Confidence 9999999988765
No 145
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.14 E-value=1e-10 Score=116.66 Aligned_cols=93 Identities=20% Similarity=0.423 Sum_probs=75.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|+|++ |..||..................+..|..+++++.+++..||+.+|.
T Consensus 248 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~ 324 (343)
T cd05103 248 MAPETIFDR---VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 324 (343)
T ss_pred ECcHHhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChh
Confidence 589988754 68899999999999999997 99999876443333333344445556667888999999999999999
Q ss_pred CCCCHHHHHHHHHhhhc
Q 015234 80 SRPLMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~ 96 (411)
+||++.+|+++|+.+.+
T Consensus 325 ~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 325 QRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999987764
No 146
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.14 E-value=8.6e-11 Score=114.84 Aligned_cols=100 Identities=18% Similarity=0.283 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||||+++|+|++|..||.+.+....+..+.......+....++..+.+++.+||+.+|++
T Consensus 199 ~aPE~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 275 (316)
T cd05574 199 IAPEVISGD---GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSK 275 (316)
T ss_pred cCHHHHcCC---CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhH
Confidence 589988765 67889999999999999999999999887776666665333222222337899999999999999999
Q ss_pred CCC----HHHHHHHHHhhhccccCCCCCCCCCC
Q 015234 81 RPL----MTDILRVFKSSQNSVHSDGGWTGHGS 109 (411)
Q Consensus 81 RPS----a~eIL~~Le~l~~~~~~~~~w~~l~~ 109 (411)
||+ +.+++. ++++....|..+..
T Consensus 276 R~s~~~~~~~ll~------~~~~~~~~~~~~~~ 302 (316)
T cd05574 276 RLGSKRGAAEIKQ------HPFFRGVNWALIRH 302 (316)
T ss_pred CCCchhhHHHHHc------CchhhcCChhhccc
Confidence 999 666654 35666666766544
No 147
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.14 E-value=3.7e-11 Score=119.05 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=83.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC------CH-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR------SV-DEIYDAVVRRQEIPPIPSGLPPAVENVLLGC 73 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~------s~-~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~C 73 (411)
||||++.+. .++.++|+|||||++|||++|..||... +. ......+. .....+|..++..+.+++.+|
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~li~~~ 237 (327)
T cd05617 163 IAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL--EKPIRIPRFLSVKASHVLKGF 237 (327)
T ss_pred CCHHHHCCC---CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH--hCCCCCCCCCCHHHHHHHHHH
Confidence 689999865 7889999999999999999999999632 22 22333333 223457788999999999999
Q ss_pred hhhccCCCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 74 FEYDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 74 L~~DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|..||.+|+++......-+-..+++|...+|..+......+++.+.
T Consensus 238 L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~ 283 (327)
T cd05617 238 LNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQ 283 (327)
T ss_pred hccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCC
Confidence 9999999998542211111124567888888887777777666555
No 148
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.14 E-value=7.6e-11 Score=113.00 Aligned_cols=90 Identities=21% Similarity=0.342 Sum_probs=68.0
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||++.... ...++.++|+|||||++|||++|..||...........+.........+..++..+.+++.+||..||
T Consensus 188 ~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 267 (282)
T cd06636 188 MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNY 267 (282)
T ss_pred cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCCh
Confidence 5899876321 23678899999999999999999999987765544443332222222234588999999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+||++.+++++
T Consensus 268 ~~Rp~~~ell~~ 279 (282)
T cd06636 268 LSRPSTEQLLKH 279 (282)
T ss_pred hhCcCHHHHhcC
Confidence 999999998754
No 149
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.14 E-value=9.7e-11 Score=110.99 Aligned_cols=86 Identities=28% Similarity=0.462 Sum_probs=71.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||.+... .++.++|+||+|+++|+|++|..||...+.......+. ....+..|..++..+.+++.+||+.||.+
T Consensus 179 ~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 254 (267)
T cd06628 179 MAPEVVKQT---SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASPEIPSNISSEAIDFLEKTFEIDHNK 254 (267)
T ss_pred cChhHhccC---CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh-ccCCCcCCcccCHHHHHHHHHHccCCchh
Confidence 578988754 67889999999999999999999998876655554443 23445677788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 255 Rp~~~~il~~ 264 (267)
T cd06628 255 RPTAAELLKH 264 (267)
T ss_pred CcCHHHHhhC
Confidence 9999998764
No 150
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=7.3e-11 Score=120.39 Aligned_cols=94 Identities=20% Similarity=0.413 Sum_probs=73.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----CC----CCCCHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----IP----SGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~-----iP----~~~p~~l~~LI~ 71 (411)
||||++.+.. ..|+.|+||||||++.+|+.+|..||....+.+.+..-+. +..|. .+ ..++..++.++.
T Consensus 197 mAPEvl~q~~-~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLq-n~pp~~~t~~~~~d~~k~~~ksf~e~i~ 274 (516)
T KOG0582|consen 197 MAPEVLMQQL-HGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQ-NDPPTLLTSGLDKDEDKKFSKSFREMIA 274 (516)
T ss_pred cChHHhhhcc-cCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhc-CCCCCcccccCChHHhhhhcHHHHHHHH
Confidence 8999976653 4699999999999999999999999999988876655443 22221 11 226677899999
Q ss_pred HhhhhccCCCCCHHHHHH--HHHhhhc
Q 015234 72 GCFEYDLRSRPLMTDILR--VFKSSQN 96 (411)
Q Consensus 72 ~CL~~DP~~RPSa~eIL~--~Le~l~~ 96 (411)
.||++||++|||++++++ .|++...
T Consensus 275 ~CL~kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 275 LCLVKDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred HHhhcCcccCCCHHHHhccHHHhhccc
Confidence 999999999999999997 4544443
No 151
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.14 E-value=8.5e-11 Score=112.95 Aligned_cols=87 Identities=17% Similarity=0.181 Sum_probs=65.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-------------------CCC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------------IPP---- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-------------------~p~---- 57 (411)
||||++.+. .++.++|+||+||++|||++|++||.+.+..+....+..... ..+
T Consensus 168 ~aPE~~~~~---~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (287)
T cd07848 168 RSPELLLGA---PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNH 244 (287)
T ss_pred CCcHHHcCC---CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccC
Confidence 689999765 688999999999999999999999988755443322211000 000
Q ss_pred -------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....++..+.+|+.+||+.||++|||+++++++
T Consensus 245 ~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 245 PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 012367889999999999999999999998864
No 152
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.13 E-value=1.2e-10 Score=112.35 Aligned_cols=89 Identities=24% Similarity=0.379 Sum_probs=70.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhc------CCCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVRR------QEIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt--G~~Pf~~~s~~ei~~~Il~~------~~~p~iP~~~p~~l~~LI~~ 72 (411)
||||++... .++.++|+|||||++|||++ +..||...+..+.+..+... ....+.+..++.++.+++.+
T Consensus 199 ~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 275 (296)
T cd05051 199 MAWESVLLG---KFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLE 275 (296)
T ss_pred cCHHHhhcC---CCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHH
Confidence 689988754 68899999999999999998 78899887766665544321 11123355678999999999
Q ss_pred hhhhccCCCCCHHHHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILRVFK 92 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le 92 (411)
||+.||.+||++.++++.|+
T Consensus 276 cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 276 CWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HhccChhcCCCHHHHHHHhc
Confidence 99999999999999988875
No 153
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.13 E-value=1.1e-10 Score=120.22 Aligned_cols=92 Identities=20% Similarity=0.351 Sum_probs=76.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+||||+++|||++ |..||......+..........++..|..++.++.+|+.+||..+|.
T Consensus 308 ~aPE~~~~~---~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~ 384 (401)
T cd05107 308 MAPESIFNN---LYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFE 384 (401)
T ss_pred eChHHhcCC---CCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChh
Confidence 689988764 67889999999999999998 89999876655555444445555667778899999999999999999
Q ss_pred CCCCHHHHHHHHHhhh
Q 015234 80 SRPLMTDILRVFKSSQ 95 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~ 95 (411)
+||++.+|+..|+.+.
T Consensus 385 ~RPs~~ell~~L~~~~ 400 (401)
T cd05107 385 IRPDFSQLVHLVGDLL 400 (401)
T ss_pred HCcCHHHHHHHHHHHh
Confidence 9999999999988654
No 154
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.13 E-value=1.2e-10 Score=110.74 Aligned_cols=89 Identities=21% Similarity=0.358 Sum_probs=72.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+.......+......+.....+++.+.+++.+||+.||++
T Consensus 180 ~~Pe~~~~~---~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~ 256 (269)
T cd08528 180 SCPEIVKNE---PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEA 256 (269)
T ss_pred cChhhhcCC---CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCcc
Confidence 589998764 68899999999999999999999998877766666554333322223367899999999999999999
Q ss_pred CCCHHHHHHHHH
Q 015234 81 RPLMTDILRVFK 92 (411)
Q Consensus 81 RPSa~eIL~~Le 92 (411)
||++.++..+++
T Consensus 257 Rp~~~e~~~~~~ 268 (269)
T cd08528 257 RPDIIQVSAMIS 268 (269)
T ss_pred CCCHHHHHHHhc
Confidence 999999988764
No 155
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.13 E-value=1.2e-10 Score=109.27 Aligned_cols=86 Identities=21% Similarity=0.402 Sum_probs=72.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||||+++|+|++|..||...+.......+ .....+.++..++..+.+++.+||+.+|++
T Consensus 177 ~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~ 252 (265)
T cd08217 177 MSPEQLNHM---SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI-KEGKFRRIPYRYSSELNEVIKSMLNVDPDK 252 (265)
T ss_pred cChhhhcCC---CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH-hcCCCCCCccccCHHHHHHHHHHccCCccc
Confidence 689998764 5788999999999999999999999988766666555 334445667788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 253 Rp~~~~il~~ 262 (265)
T cd08217 253 RPSTEELLQL 262 (265)
T ss_pred CCCHHHHhhC
Confidence 9999999864
No 156
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.13 E-value=1.2e-10 Score=115.50 Aligned_cols=108 Identities=20% Similarity=0.327 Sum_probs=79.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC--------CHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------SVD-EIYDAVVRRQEIPPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~--------s~~-ei~~~Il~~~~~p~iP~~~p~~l~~LI~ 71 (411)
||||++.+. .++.++|+||+||++|+|++|..||... ... .+...+.. ....+|..++..+.+++.
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~~~~~~li~ 237 (329)
T cd05588 163 IAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKASSVLK 237 (329)
T ss_pred cCHHHHcCC---CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHc--CCCCCCCCCCHHHHHHHH
Confidence 689999865 7889999999999999999999999632 111 23333332 335677889999999999
Q ss_pred HhhhhccCCCCCH------HHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 72 GCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 72 ~CL~~DP~~RPSa------~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
+||+.||.+|+++ .+++ .+++|...+|.........++..+.
T Consensus 238 ~~L~~dP~~R~~~~~~~~~~~i~------~hp~~~~~~~~~~~~~~~~~~~~~~ 285 (329)
T cd05588 238 GFLNKDPKERLGCHPQTGFRDIK------SHPFFRNIDWDLLEQKQVLPPYKPN 285 (329)
T ss_pred HHhccCHHHcCCCCCCCCHHHHh------cCCCCCCCCHHHHHhCCCCCCcccc
Confidence 9999999999984 4444 4467777777766555555554433
No 157
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.13 E-value=1.3e-10 Score=109.15 Aligned_cols=86 Identities=17% Similarity=0.428 Sum_probs=72.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+|+++|+|++|..||...+.......+.. ....+++..++..+.+++..||+.+|++
T Consensus 168 ~aPE~~~~~---~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~ 243 (256)
T cd08220 168 ISPELCEGK---PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSK 243 (256)
T ss_pred cCchhccCC---CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhh
Confidence 689998764 678899999999999999999999998877666666543 3334566778999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rpt~~~ll~~ 253 (256)
T cd08220 244 RPQLSQIMAQ 253 (256)
T ss_pred CCCHHHHhhC
Confidence 9999999864
No 158
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.13 E-value=9.8e-11 Score=111.13 Aligned_cols=86 Identities=20% Similarity=0.430 Sum_probs=67.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTG-VQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG-~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... ..++.++|+||||+++|||++| ..||...+....... .. ....+|...+.++.+++.+||+.+|+
T Consensus 171 ~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~li~~~l~~~p~ 245 (258)
T cd05078 171 VPPECIENP--QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF-YE--DRHQLPAPKWTELANLINQCMDYEPD 245 (258)
T ss_pred cCchhccCC--CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH-HH--ccccCCCCCcHHHHHHHHHHhccChh
Confidence 689998753 2578899999999999999998 577766655444332 22 23455666778999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||+++++++.|
T Consensus 246 ~Rps~~~il~~l 257 (258)
T cd05078 246 FRPSFRAIIRDL 257 (258)
T ss_pred hCCCHHHHHHhc
Confidence 999999998875
No 159
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.13 E-value=3.5e-11 Score=119.48 Aligned_cols=108 Identities=20% Similarity=0.314 Sum_probs=80.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC---------CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---------SVDEIYDAVVRRQEIPPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~---------s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~ 71 (411)
||||++.+. .++.++|+|||||++|||++|..||... ....+...+.. ....+|..++..+.+++.
T Consensus 163 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~~~~~~~ll~ 237 (329)
T cd05618 163 IAPEILRGE---DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLK 237 (329)
T ss_pred cCHHHHcCC---CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCCCCCHHHHHHHH
Confidence 689999865 7889999999999999999999999531 11223333332 335678889999999999
Q ss_pred HhhhhccCCCCCH------HHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 72 GCFEYDLRSRPLM------TDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 72 ~CL~~DP~~RPSa------~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
+||+.||.+||++ .+++ .+++|...+|.....+...+++.+.
T Consensus 238 ~~L~~dP~~R~~~~~~~~~~~i~------~hp~f~~~~~~~~~~~~~~~~~~~~ 285 (329)
T cd05618 238 SFLNKDPKERLGCHPQTGFADIQ------GHPFFRNVDWDLMEQKQVVPPFKPN 285 (329)
T ss_pred HHhcCCHHHcCCCCCCCCHHHHh------cCCCCCCCCHHHHHcCCCCcCccCC
Confidence 9999999999984 4443 4577788788766666666665544
No 160
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.13 E-value=7.5e-11 Score=112.26 Aligned_cols=86 Identities=27% Similarity=0.501 Sum_probs=69.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||+||++||+++|..||..................+.+|..+++.+.+++ .||..+|++
T Consensus 176 ~aPE~~~~~---~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~ 251 (266)
T cd06651 176 MSPEVISGE---GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARH 251 (266)
T ss_pred cCHHHhCCC---CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhh
Confidence 589988764 6788999999999999999999999887655544444433444566777888999998 677789999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++++++++
T Consensus 252 Rp~~~eil~h 261 (266)
T cd06651 252 RPSAEELLRH 261 (266)
T ss_pred CcCHHHHhcC
Confidence 9999999764
No 161
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.13 E-value=7.2e-11 Score=125.62 Aligned_cols=84 Identities=25% Similarity=0.429 Sum_probs=78.3
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
|||.++.. .|+.++|+|+||+++|||++ |+.||.+....+++++|- .+.+++.|..|+.++++++..||..+|.+
T Consensus 283 aPEsLrh~---kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paD 358 (1039)
T KOG0199|consen 283 APESLRHR---KFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPAD 358 (1039)
T ss_pred CHhHhccc---cccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccc
Confidence 79999864 89999999999999999999 899999999999999884 77888899999999999999999999999
Q ss_pred CCCHHHHHH
Q 015234 81 RPLMTDILR 89 (411)
Q Consensus 81 RPSa~eIL~ 89 (411)
||+|..|.+
T Consensus 359 RptFsair~ 367 (1039)
T KOG0199|consen 359 RPTFSAIRE 367 (1039)
T ss_pred cccHHHHHH
Confidence 999999974
No 162
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.13 E-value=1.2e-10 Score=109.58 Aligned_cols=86 Identities=23% Similarity=0.444 Sum_probs=73.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+..+....+.. +..+..+..++.++.+++.+||+.+|.+
T Consensus 168 ~~pe~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~ 243 (256)
T cd08218 168 LSPEICENR---PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR-GSYPPVSSHYSYDLRNLVSQLFKRNPRD 243 (256)
T ss_pred cCHHHhCCC---CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc-CCCCCCcccCCHHHHHHHHHHhhCChhh
Confidence 589988764 678899999999999999999999998877777766643 3445567788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rp~~~~vl~~ 253 (256)
T cd08218 244 RPSVNSILEK 253 (256)
T ss_pred CcCHHHHhhC
Confidence 9999999864
No 163
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.12 E-value=1.2e-10 Score=110.21 Aligned_cols=86 Identities=22% Similarity=0.356 Sum_probs=71.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS--VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s--~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
|+||++... .++.++|+||+|+++|+|++|..||.... ..+....+......+..|..+++.+.+++.+||+.+|
T Consensus 159 ~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 235 (262)
T cd05572 159 VAPEIILNK---GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNP 235 (262)
T ss_pred cChhHhcCC---CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCCh
Confidence 689988754 67889999999999999999999998776 6666666654344566777789999999999999999
Q ss_pred CCCCC-----HHHHHH
Q 015234 79 RSRPL-----MTDILR 89 (411)
Q Consensus 79 ~~RPS-----a~eIL~ 89 (411)
++||+ +.++++
T Consensus 236 ~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 236 EERLGNLKGGIKDIKK 251 (262)
T ss_pred hhCcCCcccCHHHHhc
Confidence 99999 666665
No 164
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.12 E-value=9.1e-11 Score=123.88 Aligned_cols=86 Identities=23% Similarity=0.525 Sum_probs=75.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .|+.++|||||||++|||++|..||.+.+..+....+... ...++|..+++++.+++.+||+.||.+
T Consensus 212 ~aPE~~~~~---~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~L~~dP~~ 287 (496)
T PTZ00283 212 VAPEIWRRK---PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG-RYDPLPPSISPEMQEIVTALLSSDPKR 287 (496)
T ss_pred eCHHHhCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHcccChhh
Confidence 689999865 7899999999999999999999999998887777776543 334567889999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 288 RPs~~ell~~ 297 (496)
T PTZ00283 288 RPSSSKLLNM 297 (496)
T ss_pred CcCHHHHHhC
Confidence 9999999874
No 165
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.12 E-value=1.3e-10 Score=115.33 Aligned_cols=87 Identities=20% Similarity=0.347 Sum_probs=65.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH------------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV------------------------------ 50 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il------------------------------ 50 (411)
||||++.+. .++.++|+|||||++|||++|+.||...+..++...+.
T Consensus 169 ~aPE~~~~~---~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (331)
T cd06649 169 MSPERLQGT---HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGM 245 (331)
T ss_pred CCHhHhcCC---CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccccccccc
Confidence 689999865 78899999999999999999999997655443322110
Q ss_pred ---------------hcCCCCCCC-CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 51 ---------------RRQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 51 ---------------~~~~~p~iP-~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+..+ ..+++++.+|+.+||+.||++||++.+++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 246 DSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 001111111 2467899999999999999999999999875
No 166
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.12 E-value=1.4e-10 Score=109.97 Aligned_cols=87 Identities=24% Similarity=0.424 Sum_probs=69.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR-QEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~-~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||+|+++|+|++|..||...+.......+... ...+..+..++.++.+++.+||+.+|.
T Consensus 175 ~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 251 (265)
T cd06631 175 MAPEVINES---GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQH 251 (265)
T ss_pred cChhhhcCC---CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcc
Confidence 579988764 6788999999999999999999999876654443333222 233456777899999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 252 ~Rp~~~~~l~~ 262 (265)
T cd06631 252 ERPSALQLLRH 262 (265)
T ss_pred cCCCHHHHhcC
Confidence 99999998753
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.12 E-value=7.4e-11 Score=114.23 Aligned_cols=108 Identities=19% Similarity=0.277 Sum_probs=76.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~---ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||++... .++.++|+||+|+++|+|++|..||...... +....+.. ......+..+++++.+|+..||+.|
T Consensus 168 ~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~ 243 (285)
T cd05630 168 MAPEVVKNE---RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EVQEEYSEKFSPDARSLCKMLLCKD 243 (285)
T ss_pred cChHHHcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hhhhhcCccCCHHHHHHHHHHhhcC
Confidence 689999765 6889999999999999999999999865321 22222221 1223456678899999999999999
Q ss_pred cCCCCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 78 LRSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 78 P~~RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
|.+||+ +.+++.+ ++|.+..|.........|++.|
T Consensus 244 p~~R~s~~~~~~~~~~~h------~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05630 244 PKERLGCQGGGAREVKEH------PLFKQINFKRLEAGMLEPPFKP 283 (285)
T ss_pred HHHccCCCCCchHHHHcC------hhhhccCHHHHhcCCCCCCCCC
Confidence 999999 7777754 4455555554444444455443
No 168
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.11 E-value=1.5e-10 Score=112.73 Aligned_cols=89 Identities=24% Similarity=0.360 Sum_probs=69.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHh---cC---CCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR---RQ---EIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt--G~~Pf~~~s~~ei~~~Il~---~~---~~p~iP~~~p~~l~~LI~~ 72 (411)
||||++... .++.++|+||||+++|||++ +..||...+..+....+.. .. ..+..|+.++..+.+|+.+
T Consensus 207 ~aPE~~~~~---~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 283 (304)
T cd05096 207 MAWECILMG---KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQ 283 (304)
T ss_pred cCHHHHhcC---CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHH
Confidence 689988754 78999999999999999986 6788887766555443311 11 1123456788999999999
Q ss_pred hhhhccCCCCCHHHHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILRVFK 92 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le 92 (411)
||+.||.+||++.+|.+.|+
T Consensus 284 cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 284 CWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HccCCchhCcCHHHHHHHHh
Confidence 99999999999999988765
No 169
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.11 E-value=1.4e-10 Score=112.10 Aligned_cols=108 Identities=21% Similarity=0.311 Sum_probs=86.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+.......+. ...+.+|..++..+.+++.+||+.+|.+
T Consensus 165 ~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~ 239 (290)
T cd05580 165 LAPEIILSK---GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL--EGKVRFPSFFSPDAKDLIRNLLQVDLTK 239 (290)
T ss_pred cChhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCccCCccCCHHHHHHHHHHccCCHHH
Confidence 589988764 67889999999999999999999999887766666664 2335677788999999999999999999
Q ss_pred CC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|+ ++.++++ ++++...+|..+.......|..+.
T Consensus 240 R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~~~ 277 (290)
T cd05580 240 RLGNLKNGVNDIKN------HPWFAGIDWIALLQRKIEAPFIPK 277 (290)
T ss_pred ccCcccCCHHHHHc------CcccccCCHHHHhhccCCCCccCC
Confidence 99 5666653 467777888877777766666544
No 170
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.11 E-value=1e-10 Score=120.36 Aligned_cols=86 Identities=22% Similarity=0.378 Sum_probs=79.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
|+||++.+. +|+.++|||||||++|||++-+++|.+.+...+..++.... ..++|..++.+++.++..||..+|..
T Consensus 173 mcPEil~d~---pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~ 248 (426)
T KOG0589|consen 173 MCPEILSDI---PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEH 248 (426)
T ss_pred cCHHHhCCC---CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCcc
Confidence 789999987 99999999999999999999999999999999999987544 46788999999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++..
T Consensus 249 RPsa~~LL~~ 258 (426)
T KOG0589|consen 249 RPSALELLRR 258 (426)
T ss_pred CCCHHHHhhC
Confidence 9999999873
No 171
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.11 E-value=2.2e-10 Score=108.19 Aligned_cols=91 Identities=23% Similarity=0.518 Sum_probs=71.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--SVDEIYDAVVRRQEIPPIPS-GLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~--s~~ei~~~Il~~~~~p~iP~-~~p~~l~~LI~~CL~~D 77 (411)
+|||++.+. .++.++|+||||+++|+|++|..||... +..+....+. ....++.|. .++..+.+++.+||..+
T Consensus 173 ~apE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~ 248 (267)
T cd08224 173 MSPERIHEN---GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPD 248 (267)
T ss_pred cCHHHhccC---CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCC
Confidence 479988764 6888999999999999999999999654 3334444432 233344444 68889999999999999
Q ss_pred cCCCCCHHHHHHHHHhhh
Q 015234 78 LRSRPLMTDILRVFKSSQ 95 (411)
Q Consensus 78 P~~RPSa~eIL~~Le~l~ 95 (411)
|++||++.+|++.|+.+.
T Consensus 249 p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 249 PEKRPDISYVLQVAKEMH 266 (267)
T ss_pred cccCCCHHHHHHHHHHhc
Confidence 999999999999887653
No 172
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.10 E-value=6.9e-11 Score=112.19 Aligned_cols=91 Identities=19% Similarity=0.204 Sum_probs=66.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~i---P~~~p~~l~~LI~~CL~~D 77 (411)
||||.+.......++.++|+||+||++|||++|..||...+.......+......++. +..++..+.+++.+||+.+
T Consensus 173 ~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06646 173 MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKN 252 (267)
T ss_pred cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCC
Confidence 6899875332335788999999999999999999999766544333322111212211 2346789999999999999
Q ss_pred cCCCCCHHHHHHHH
Q 015234 78 LRSRPLMTDILRVF 91 (411)
Q Consensus 78 P~~RPSa~eIL~~L 91 (411)
|++||+++++++++
T Consensus 253 P~~Rp~~~~il~~l 266 (267)
T cd06646 253 PKKRPTAERLLTHL 266 (267)
T ss_pred hhhCcCHHHHhcCC
Confidence 99999999998753
No 173
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.10 E-value=1.4e-10 Score=112.23 Aligned_cols=108 Identities=19% Similarity=0.286 Sum_probs=76.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~--~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|+||+|+++|+|++|..||...........+.. ......++..++..+.+|+..||+.||
T Consensus 168 ~aPE~~~~~---~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 244 (285)
T cd05632 168 MAPEVLNNQ---RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDP 244 (285)
T ss_pred cChHHhcCC---CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCH
Confidence 689998764 688999999999999999999999987655433332221 111234566788999999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCC
Q 015234 79 RSRPL-----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS 117 (411)
Q Consensus 79 ~~RPS-----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~s 117 (411)
.+||+ +.+++. +.++....|.........|++.
T Consensus 245 ~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~~ 282 (285)
T cd05632 245 KQRLGCQEEGAGEVKR------HPFFRNMNFKRLEAGMLDPPFV 282 (285)
T ss_pred hHcCCCcccChHHHHc------ChhhhcCCHHHHhcCcCCCCCC
Confidence 99999 455543 2445555555444444555543
No 174
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.10 E-value=1.1e-10 Score=111.93 Aligned_cols=86 Identities=20% Similarity=0.385 Sum_probs=71.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||||+++|||++|..||...+.......+ .....+.++..++..+.+++.+||+.+|.+
T Consensus 168 ~apE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 243 (277)
T cd06640 168 MAPEVIQQS---AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-PKNNPPTLTGEFSKPFKEFIDACLNKDPSF 243 (277)
T ss_pred cCHhHhccC---CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-hcCCCCCCchhhhHHHHHHHHHHcccCccc
Confidence 589988754 6788999999999999999999999887766555543 233345556678889999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 244 Rp~~~~il~~ 253 (277)
T cd06640 244 RPTAKELLKH 253 (277)
T ss_pred CcCHHHHHhC
Confidence 9999999875
No 175
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.10 E-value=1.5e-10 Score=117.09 Aligned_cols=112 Identities=17% Similarity=0.255 Sum_probs=82.8
Q ss_pred CCCccccCCC-CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~-~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~D 77 (411)
||||++.... ...++.++|+|||||++|||++|..||...+....+..+........+|. .++.++.+|+.+||+.+
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~ 289 (370)
T cd05596 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDR 289 (370)
T ss_pred ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccCh
Confidence 6899886531 12478899999999999999999999999888777777765443344444 57899999999999998
Q ss_pred cCC--CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 78 LRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 78 P~~--RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
|.+ |+++.+++.+ +++....|.....+...++..|
T Consensus 290 p~r~~R~s~~ell~h------~~~~~~~~~~~~~~~~~~~~~p 326 (370)
T cd05596 290 EVRLGRNGVDEIKSH------PFFKNDQWTFDNIRETVAPVVP 326 (370)
T ss_pred hhccCCCCHHHHhcC------cccCCCChhhHHhcCCCcCccC
Confidence 987 9999998765 5555555554333333344433
No 176
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.10 E-value=2.1e-10 Score=111.23 Aligned_cols=89 Identities=24% Similarity=0.410 Sum_probs=69.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHh------cCCCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR------RQEIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt--G~~Pf~~~s~~ei~~~Il~------~~~~p~iP~~~p~~l~~LI~~ 72 (411)
||||+.... .++.++|+|||||++|||++ +..||...+..+....... .....+.+..+++.+.+|+..
T Consensus 199 ~~pe~~~~~---~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 275 (296)
T cd05095 199 MSWESILLG---KFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLS 275 (296)
T ss_pred CCHHHHhcC---CccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHH
Confidence 578876643 68899999999999999998 7899987766555443211 111233456688999999999
Q ss_pred hhhhccCCCCCHHHHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILRVFK 92 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le 92 (411)
||+.||.+||++.++.+.|+
T Consensus 276 cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 276 CWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HcCCCcccCCCHHHHHHHHh
Confidence 99999999999999998875
No 177
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.09 E-value=1.1e-10 Score=121.18 Aligned_cols=88 Identities=22% Similarity=0.293 Sum_probs=68.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------------- 55 (411)
||||++.+. ..|+.++||||+||++|||++|.+||.+.+..+.+..+......
T Consensus 237 ~aPE~~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 314 (440)
T PTZ00036 237 RAPELMLGA--TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKD 314 (440)
T ss_pred cCHHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchh
Confidence 699988653 26889999999999999999999999987665544433221000
Q ss_pred --CCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 --PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 --p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+|...++++.+|+.+||++||.+|||+.+++++
T Consensus 315 l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 01244577899999999999999999999999864
No 178
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.09 E-value=2.2e-10 Score=111.87 Aligned_cols=89 Identities=18% Similarity=0.299 Sum_probs=69.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC-CCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI-PSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~i-P~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.....+.++.++|+||||+++|||++|..||...+.......+... ..+.. +..++..+.+++.+||..+|+
T Consensus 178 ~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~ 256 (307)
T cd06607 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLSSNDWSDYFRNFVDSCLQKIPQ 256 (307)
T ss_pred cCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC-CCCCCCchhhCHHHHHHHHHHhcCChh
Confidence 6899885322246788999999999999999999999988776665555322 22322 345788999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 257 ~Rp~~~~il~~ 267 (307)
T cd06607 257 DRPSSEELLKH 267 (307)
T ss_pred hCcCHHHHhcC
Confidence 99999999864
No 179
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.09 E-value=1.7e-10 Score=110.47 Aligned_cols=86 Identities=21% Similarity=0.423 Sum_probs=70.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||||+++|||++|..||...........+ .....+..+..++..+.+++.+||+.+|++
T Consensus 168 ~aPE~~~~~---~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 243 (277)
T cd06642 168 MAPEVIKQS---AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI-PKNSPPTLEGQYSKPFKEFVEACLNKDPRF 243 (277)
T ss_pred cCHHHhCcC---CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhh-hcCCCCCCCcccCHHHHHHHHHHccCCccc
Confidence 589998765 6788999999999999999999999876655555443 233334455668889999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rp~~~~il~~ 253 (277)
T cd06642 244 RPTAKELLKH 253 (277)
T ss_pred CcCHHHHHHh
Confidence 9999999874
No 180
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.09 E-value=1.8e-10 Score=120.43 Aligned_cols=85 Identities=27% Similarity=0.458 Sum_probs=77.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||.+.+. +|+..+|.||+||++||+++|++||...+..++...|+.. ....|..++..+.+|+..+|++||.+
T Consensus 167 mAPElv~e~---pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d--~v~~p~~~S~~f~nfl~gLL~kdP~~ 241 (808)
T KOG0597|consen 167 MAPELVEEQ---PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKD--PVKPPSTASSSFVNFLQGLLIKDPAQ 241 (808)
T ss_pred cCHHHHcCC---CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcC--CCCCcccccHHHHHHHHHHhhcChhh
Confidence 899999975 9999999999999999999999999998888888888644 35567789999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
|.+..+++.|
T Consensus 242 RltW~~Ll~H 251 (808)
T KOG0597|consen 242 RLTWTDLLGH 251 (808)
T ss_pred cccHHHHhcC
Confidence 9999999874
No 181
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.09 E-value=3.1e-10 Score=114.08 Aligned_cols=105 Identities=21% Similarity=0.326 Sum_probs=79.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhh--h
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFE--Y 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~--~ 76 (411)
||||++.+. .|+.++|+|||||++|||++|..||.+.+..+.+..+........+|. .+++++.+++.+++. .
T Consensus 203 ~aPE~~~~~---~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~ 279 (363)
T cd05628 203 IAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWE 279 (363)
T ss_pred cCHHHHcCC---CCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChh
Confidence 689999865 788999999999999999999999999888888877764333333443 368899999987554 2
Q ss_pred ccCCCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCC
Q 015234 77 DLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPD 114 (411)
Q Consensus 77 DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~p 114 (411)
++..||+++++++ +++|.+.+|..+..+....
T Consensus 280 ~r~~r~~~~ei~~------hp~f~~~~~~~~~~~~~~~ 311 (363)
T cd05628 280 HRIGAPGVEEIKT------NPFFEGVDWEHIRERPAAI 311 (363)
T ss_pred hcCCCCCHHHHhC------CCCCCCCCHHHHHhCCCCC
Confidence 3345688888864 4788888888765544333
No 182
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.09 E-value=3e-10 Score=110.07 Aligned_cols=89 Identities=22% Similarity=0.362 Sum_probs=69.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHh---c---CCCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR---R---QEIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt--G~~Pf~~~s~~ei~~~Il~---~---~~~p~iP~~~p~~l~~LI~~ 72 (411)
||||++... .++.++|+||||+++|+|++ +..||...+..+....+.. . ......+..+++.+.+|+.+
T Consensus 198 ~aPE~~~~~---~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 274 (295)
T cd05097 198 MAWESILLG---KFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274 (295)
T ss_pred cChhhhccC---CcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHH
Confidence 589988754 68899999999999999988 6788888766655544321 1 11123355678999999999
Q ss_pred hhhhccCCCCCHHHHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILRVFK 92 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le 92 (411)
||+.+|++||++.+|++.|+
T Consensus 275 ~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 275 CWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HcCCCchhCcCHHHHHHHHh
Confidence 99999999999999998875
No 183
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.08 E-value=2.1e-10 Score=108.37 Aligned_cols=90 Identities=20% Similarity=0.371 Sum_probs=67.1
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||++.... ...++.++|+||||+++|+|++|..||...........+..... ....+..++..+.+++.+||..|
T Consensus 180 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 259 (275)
T cd06608 180 MAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKN 259 (275)
T ss_pred cCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcC
Confidence 6899875421 12467899999999999999999999987665555555432211 11123347789999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+|||+.+++++
T Consensus 260 p~~Rpt~~~ll~~ 272 (275)
T cd06608 260 YEQRPFMEELLEH 272 (275)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999764
No 184
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.08 E-value=2.2e-10 Score=108.29 Aligned_cols=98 Identities=18% Similarity=0.291 Sum_probs=73.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--IPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~--~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||++.+. .++.++|+||+|+++|+|++|..||...+.......+..... ....+..+++.+.+++.+||+.+|
T Consensus 160 ~~pe~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 160 LAPETILGV---GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred cChhhhcCC---CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCH
Confidence 589998765 578899999999999999999999998877776665543222 122344688999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhccccCCCCC
Q 015234 79 RSRPLMTDILRVFKSSQNSVHSDGGW 104 (411)
Q Consensus 79 ~~RPSa~eIL~~Le~l~~~~~~~~~w 104 (411)
++||++.++.+.+ .++++....|
T Consensus 237 ~~R~~~~~~~~~l---~~~~~~~~~~ 259 (260)
T cd05611 237 AKRLGANGYQEIK---SHPFFKSINW 259 (260)
T ss_pred HHccCCCcHHHHH---cChHhhcCCC
Confidence 9999775443332 3355555544
No 185
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.08 E-value=2.8e-10 Score=106.49 Aligned_cols=86 Identities=27% Similarity=0.575 Sum_probs=72.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+... .++.++|+||+|+++|+|++ |.+||...+.......+. ....+..+..++.++.+++.+||..+|+
T Consensus 171 ~~Pe~~~~~---~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 246 (258)
T smart00219 171 MAPESLKDG---KFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK-KGYRLPKPENCPPEIYKLMLQCWAEDPE 246 (258)
T ss_pred cChHHhccC---CCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHHHHHHHHHCcCChh
Confidence 578888643 67899999999999999998 889998887777777664 3445566777899999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+|||+.++++.
T Consensus 247 ~Rpt~~~ll~~ 257 (258)
T smart00219 247 DRPTFSELVEI 257 (258)
T ss_pred hCcCHHHHHhh
Confidence 99999998865
No 186
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.08 E-value=3.1e-10 Score=108.21 Aligned_cols=89 Identities=25% Similarity=0.530 Sum_probs=72.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .++.++|+||||+++|++++ |..||...........+.........+..++..+.+++.+||+.+|.
T Consensus 185 ~~PE~~~~~---~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~ 261 (275)
T cd05046 185 LAPEAVQED---DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPK 261 (275)
T ss_pred cChhhhccC---CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 689988754 57789999999999999998 88999877766666655433333345667889999999999999999
Q ss_pred CCCCHHHHHHHHH
Q 015234 80 SRPLMTDILRVFK 92 (411)
Q Consensus 80 ~RPSa~eIL~~Le 92 (411)
+||++.+++..|.
T Consensus 262 ~Rp~~~~~l~~l~ 274 (275)
T cd05046 262 DRPSFSELVSALG 274 (275)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999998764
No 187
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.08 E-value=2.2e-10 Score=120.18 Aligned_cols=85 Identities=26% Similarity=0.439 Sum_probs=74.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|||||||++|||++|..||...+..++...+... ...+.|..++.++.+++.+||+.||++
T Consensus 238 ~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~ 313 (478)
T PTZ00267 238 LAPELWERK---RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG-KYDPFPCPVSSGMKALLDPLLSKNPAL 313 (478)
T ss_pred cCHhHhCCC---CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCccCCHHHHHHHHHHhccChhh
Confidence 689998865 7899999999999999999999999988888877776543 334567778999999999999999999
Q ss_pred CCCHHHHHH
Q 015234 81 RPLMTDILR 89 (411)
Q Consensus 81 RPSa~eIL~ 89 (411)
||++.+++.
T Consensus 314 Rps~~~~l~ 322 (478)
T PTZ00267 314 RPTTQQLLH 322 (478)
T ss_pred CcCHHHHHh
Confidence 999999876
No 188
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.08 E-value=3.7e-10 Score=111.05 Aligned_cols=92 Identities=16% Similarity=0.225 Sum_probs=72.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.....+.++.++|+||||+++|||++|..||...+.......+.........+..++..+.+++.+||+.+|.+
T Consensus 188 ~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~ 267 (317)
T cd06635 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQD 267 (317)
T ss_pred cChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCccc
Confidence 58998753212367889999999999999999999998877666666665443333334567889999999999999999
Q ss_pred CCCHHHHHHHHH
Q 015234 81 RPLMTDILRVFK 92 (411)
Q Consensus 81 RPSa~eIL~~Le 92 (411)
||++.++++++.
T Consensus 268 Rpt~~~il~~~~ 279 (317)
T cd06635 268 RPTSEELLKHMF 279 (317)
T ss_pred CcCHHHHHhChh
Confidence 999999988643
No 189
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.07 E-value=2.3e-10 Score=109.88 Aligned_cols=87 Identities=18% Similarity=0.307 Sum_probs=66.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC------------------C------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------P------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------p------ 56 (411)
||||++.+. .++.++|+||+||++|+|++|.+||...+......++...... +
T Consensus 174 ~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (288)
T cd07863 174 RAPEVLLQS---TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPV 250 (288)
T ss_pred cCchHhhCC---CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCch
Confidence 689999765 6899999999999999999999999887655544443221000 0
Q ss_pred -CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 -PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 -~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+.++..+.+++.+||+.||++||++.+++.+
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 251 QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0113467788999999999999999999998754
No 190
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.07 E-value=2.4e-10 Score=107.14 Aligned_cols=88 Identities=30% Similarity=0.567 Sum_probs=71.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||.+... ..++.++|+||||+++|+|++|..||...........+......+.++..+++.+.+++.+||+.+|.+
T Consensus 168 ~~pe~~~~~--~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 245 (258)
T cd06632 168 MAPEVIAQQ--GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSL 245 (258)
T ss_pred eCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCccc
Confidence 578887654 137889999999999999999999998876555555544334445667788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 246 Rp~~~~~l~~ 255 (258)
T cd06632 246 RPTAAELLEH 255 (258)
T ss_pred CcCHHHHhcC
Confidence 9999998754
No 191
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.07 E-value=1.6e-10 Score=108.47 Aligned_cols=87 Identities=22% Similarity=0.310 Sum_probs=67.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+.......+.... .....+..++..+.+++.+||+.+|.
T Consensus 166 ~~PE~~~~~---~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 242 (256)
T cd06612 166 MAPEVIQEI---GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPE 242 (256)
T ss_pred cCHHHHhcC---CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChh
Confidence 589988765 68889999999999999999999998776554443332111 11223455778999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 243 ~Rps~~~il~~ 253 (256)
T cd06612 243 ERPSAIQLLQH 253 (256)
T ss_pred hCcCHHHHhcC
Confidence 99999999764
No 192
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.07 E-value=1.7e-10 Score=113.98 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=76.8
Q ss_pred CCCccccCCC---CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~---~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~ 75 (411)
||||++.... ...++.++|||||||++|||++|..||...+....+..+.........| ..++..+.+|+..||+
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~ 249 (330)
T cd05601 170 IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC 249 (330)
T ss_pred cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 6899886310 1257889999999999999999999999887777777665433223333 3578999999999998
Q ss_pred hccCCCCCHHHHHHHHHhhhccccCCCCCCCCC
Q 015234 76 YDLRSRPLMTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
+|.+||++.+++.+ +++...+|....
T Consensus 250 -~p~~R~t~~~l~~h------~~~~~~~~~~~~ 275 (330)
T cd05601 250 -GQKERLGYEGLCCH------PFFSKIDWNNIR 275 (330)
T ss_pred -ChhhCCCHHHHhCC------CCcCCCCHHHHh
Confidence 99999999988643 666666666544
No 193
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=9.2e-11 Score=122.21 Aligned_cols=90 Identities=20% Similarity=0.300 Sum_probs=65.7
Q ss_pred CCCccccCCCCC--------CCCccccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCCHH-HHHHH
Q 015234 1 MAPEQWQPEVRG--------PISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPA-VENVL 70 (411)
Q Consensus 1 MAPEvl~~~~~g--------~ys~ksDIWSlGviLyELltG~~Pf~~~s-~~ei~~~Il~~~~~p~iP~~~p~~-l~~LI 70 (411)
|+||.+.+..+. +.+.++||||+|||||+|+.|++||.... ....+..|...+-..++|...+.. +.++|
T Consensus 528 MsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~m 607 (677)
T KOG0596|consen 528 MSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVM 607 (677)
T ss_pred cCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHH
Confidence 899988764322 36789999999999999999999998753 333333443222222344433333 89999
Q ss_pred HHhhhhccCCCCCHHHHHHH
Q 015234 71 LGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 71 ~~CL~~DP~~RPSa~eIL~~ 90 (411)
+.||+.||.+||+..++|++
T Consensus 608 K~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 608 KCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred HHHHhcCcccCCCcHHHhcC
Confidence 99999999999999999875
No 194
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.07 E-value=2.9e-10 Score=106.79 Aligned_cols=86 Identities=24% Similarity=0.476 Sum_probs=70.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||||+++|+|++|..||...+..+....+.. ......+..++..+.+++.+||+.+|++
T Consensus 169 ~ape~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 244 (257)
T cd08225 169 LSPEICQNR---PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ-GYFAPISPNFSRDLRSLISQLFKVSPRD 244 (257)
T ss_pred cCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-ccCCCCCCCCCHHHHHHHHHHhccChhh
Confidence 578988754 678899999999999999999999988776666555433 2334455678889999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 245 Rpt~~~ll~~ 254 (257)
T cd08225 245 RPSITSILKR 254 (257)
T ss_pred CcCHHHHhhC
Confidence 9999999764
No 195
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.07 E-value=1.1e-10 Score=121.99 Aligned_cols=95 Identities=28% Similarity=0.519 Sum_probs=87.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .|+.++|||||||++||+++ |..||.+....++...|...+++.+.|...|.++..++..||..+|+
T Consensus 329 LAPEtl~~~---~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~ 405 (474)
T KOG0194|consen 329 LAPETLNTG---IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPE 405 (474)
T ss_pred cChhhhccC---ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChh
Confidence 699999864 89999999999999999999 88999999999999999888888888999999999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccc
Q 015234 80 SRPLMTDILRVFKSSQNSV 98 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~ 98 (411)
+||+|.++.+.|+.+....
T Consensus 406 ~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 406 DRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred hccCHHHHHHHHHHHHhcc
Confidence 9999999999988777654
No 196
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.06 E-value=1.1e-10 Score=116.98 Aligned_cols=105 Identities=21% Similarity=0.340 Sum_probs=81.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~DP 78 (411)
||||++.+. .|+.++|+|||||++|||++|..||...+....+..+........+|. .+++++.+++.+++. ||
T Consensus 203 ~APE~~~~~---~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p 278 (360)
T cd05627 203 IAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DS 278 (360)
T ss_pred cCHHHHcCC---CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-Ch
Confidence 689999865 788999999999999999999999999888887777754333333443 378899999998764 99
Q ss_pred CCCCC---HHHHHHHHHhhhccccCCCCCCCCCCCCCCCC
Q 015234 79 RSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDK 115 (411)
Q Consensus 79 ~~RPS---a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp 115 (411)
.+|++ +.+++ .+++|.+.+|..+..+....|
T Consensus 279 ~~R~~~~~~~ei~------~hp~f~~~~~~~~~~~~~~~~ 312 (360)
T cd05627 279 ENRIGSNGVEEIK------SHPFFEGVDWGHIRERPAAIP 312 (360)
T ss_pred hhcCCCCCHHHHh------cCCCCCCCCHHHHhcCCCCCC
Confidence 99986 45544 457888889988766554444
No 197
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.06 E-value=2.9e-10 Score=115.18 Aligned_cols=99 Identities=21% Similarity=0.268 Sum_probs=75.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHH--hhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLG--CFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~--CL~~ 76 (411)
||||++... .|+.++|||||||++|||++|..||...+..+....+........+| ..+++++.+|+.+ |+..
T Consensus 215 ~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~ 291 (381)
T cd05626 215 IAPEVLLRK---GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAE 291 (381)
T ss_pred cCHHHHcCC---CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcc
Confidence 689999865 78899999999999999999999999887766665554333223333 3578999999988 4455
Q ss_pred ccCCCCCHHHHHHHHHhhhccccCCCCCCCCC
Q 015234 77 DLRSRPLMTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 77 DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
++..|+++.+++.+ ++|.+..|....
T Consensus 292 ~~~~R~~~~~~l~h------p~f~~~~~~~~~ 317 (381)
T cd05626 292 ERLGRNGADDIKAH------PFFSEVDFSSDI 317 (381)
T ss_pred cccCCCCHHHHhcC------cccCCCChhHHh
Confidence 66669999999754 667776776543
No 198
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.06 E-value=2.5e-10 Score=109.52 Aligned_cols=106 Identities=21% Similarity=0.355 Sum_probs=78.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~----~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
+|||++.+. .++.++|+||+|+++|+|++|..||..... ..+...+. ......+..+++.+.+++.+||+.
T Consensus 161 ~~PE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~ 235 (277)
T cd05577 161 MAPEVLQGE---VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQK 235 (277)
T ss_pred CCHHHhcCC---CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccC
Confidence 589998764 578899999999999999999999987543 22222221 223445677899999999999999
Q ss_pred ccCCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS 117 (411)
Q Consensus 77 DP~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~s 117 (411)
+|.+|| ++.+++. ++++...+|.........+++.
T Consensus 236 ~p~~R~~~~~~~~~~ll~------h~~~~~~~~~~~~~~~~~~~~~ 275 (277)
T cd05577 236 DPEKRLGCRGGSADEVRE------HPLFKDLNWRRLEAGMLEPPFI 275 (277)
T ss_pred ChhHccCCCcccHHHHHh------ChhhhcCChhhhhcCCCCCCCC
Confidence 999999 5555543 4666677777766655566554
No 199
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.06 E-value=3.9e-10 Score=109.95 Aligned_cols=87 Identities=23% Similarity=0.346 Sum_probs=69.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+... .++.++|+|||||++|+|++|..||...+.......+.... .....+..+++.+.+++.+||..||.
T Consensus 182 ~aPE~~~~~---~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 258 (296)
T cd06655 182 MAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVE 258 (296)
T ss_pred cCcchhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChh
Confidence 689988764 67889999999999999999999999877655444443222 12234567889999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 259 ~Rpt~~~il~~ 269 (296)
T cd06655 259 KRGSAKELLQH 269 (296)
T ss_pred hCCCHHHHhhC
Confidence 99999999863
No 200
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.06 E-value=4.2e-10 Score=105.99 Aligned_cols=86 Identities=21% Similarity=0.356 Sum_probs=71.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+||+|+++|||++|..||...+..+....+.... ..+.+..++.++.+++.+||+.+|.+
T Consensus 168 ~ape~~~~~---~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~ 243 (256)
T cd08221 168 MSPELCQGV---KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGN-YTPVVSVYSSELISLVHSLLQQDPEK 243 (256)
T ss_pred cCHhhcCCC---CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC-CCCCccccCHHHHHHHHHHcccCccc
Confidence 478988754 57789999999999999999999999887777777665333 33445678899999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 R~s~~~ll~~ 253 (256)
T cd08221 244 RPTADEVLDQ 253 (256)
T ss_pred CCCHHHHhhC
Confidence 9999999875
No 201
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.06 E-value=3e-10 Score=109.08 Aligned_cols=90 Identities=22% Similarity=0.352 Sum_probs=69.4
Q ss_pred CCCccccCC--CCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPE--VRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~--~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||++... ....++.++|+||+||++|||++|.+||...+..+....+.... .....|..++..+.+++.+||+.+
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (282)
T cd06643 170 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKN 249 (282)
T ss_pred cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCC
Confidence 689988532 11256789999999999999999999998877666555543221 122345668899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++++
T Consensus 250 p~~Rp~~~~il~~ 262 (282)
T cd06643 250 VDARWTTTQLLQH 262 (282)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999998754
No 202
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.05 E-value=3.3e-10 Score=110.89 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=69.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.....+.++.++|+|||||++|+|++|..||...+..+....+.........+..++..+.+++.+||..+|.+
T Consensus 178 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~ 257 (308)
T cd06634 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 257 (308)
T ss_pred cCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCccc
Confidence 58998753212357889999999999999999999998876655555543332222234468889999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 258 Rp~~~~ll~~ 267 (308)
T cd06634 258 RPTSEVLLKH 267 (308)
T ss_pred CCCHHHHhhC
Confidence 9999999875
No 203
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.05 E-value=3.3e-10 Score=109.09 Aligned_cols=111 Identities=20% Similarity=0.330 Sum_probs=82.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS----VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s----~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
+|||++... ...++.++|+||||+++|||++|..||.... ..++...+.. ..++.|..++..+.+++.+||+.
T Consensus 173 ~aPE~~~~~-~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~ 249 (288)
T cd05583 173 MAPEVIRGG-SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--SKPPFPKTMSAEARDFIQKLLEK 249 (288)
T ss_pred cCHHHhcCC-CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--cCCCCCcccCHHHHHHHHHHhcC
Confidence 578887653 1136789999999999999999999996432 2333333332 23556777899999999999999
Q ss_pred ccCCCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSS 117 (411)
Q Consensus 77 DP~~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~s 117 (411)
+|++|||+.++...| .+.++...+|..+..+...+++.
T Consensus 250 ~p~~R~t~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~ 287 (288)
T cd05583 250 DPKKRLGANGADEIK---NHPFFQGIDWDDLAAKRIPAPFK 287 (288)
T ss_pred CHhhccCcchHHHHh---cCcccccCCHHHHhhhccCCCCC
Confidence 999999988776654 45677888888777766666653
No 204
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.05 E-value=3.3e-10 Score=110.29 Aligned_cols=87 Identities=21% Similarity=0.320 Sum_probs=68.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... .++.++|+|||||++|+|++|..||...+.......+..... ....+..++..+.+++.+||..+|.
T Consensus 183 ~aPE~~~~~---~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 259 (296)
T cd06654 183 MAPEVVTRK---AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVE 259 (296)
T ss_pred cCHHHHcCC---CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcc
Confidence 589988764 678899999999999999999999988766444333322221 1233566888999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++++
T Consensus 260 ~Rpt~~eil~~ 270 (296)
T cd06654 260 KRGSAKELLQH 270 (296)
T ss_pred cCcCHHHHhhC
Confidence 99999999874
No 205
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.05 E-value=8.5e-11 Score=116.18 Aligned_cols=108 Identities=16% Similarity=0.267 Sum_probs=80.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-SGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP-~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. ..++.++|+||+||++|+|++|..||...+..+.+..+.... ..+| ..+++++.+++.+||..||.
T Consensus 163 ~aPE~~~~~--~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~li~~~L~~~P~ 238 (330)
T cd05586 163 LAPEVLLDE--KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK--VRFPKNVLSDEGRQFVKGLLNRNPQ 238 (330)
T ss_pred cCHHHHcCC--CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCCCHH
Confidence 789998753 247889999999999999999999999988877777765433 2333 34789999999999999999
Q ss_pred CCCC----HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCC
Q 015234 80 SRPL----MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSS 118 (411)
Q Consensus 80 ~RPS----a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp 118 (411)
+||+ +.+++ .++++....|.........++..+
T Consensus 239 ~R~~~~~~~~~ll------~h~~~~~~~~~~~~~~~~~~~~~~ 275 (330)
T cd05586 239 HRLGAHRDAVELK------EHPFFADIDWDLLSKKQITPPFKP 275 (330)
T ss_pred HCCCCCCCHHHHh------cCccccCCCHHHHHhCCCCCCccC
Confidence 9995 45544 345666666666555555555443
No 206
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.05 E-value=2.9e-10 Score=107.05 Aligned_cols=90 Identities=22% Similarity=0.315 Sum_probs=67.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC---CCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP---IPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~---iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++.......++.++|+||||+++|+|++|..||...+.......+......+. .+...+.++.+++.+||..+
T Consensus 168 ~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 247 (262)
T cd06613 168 MAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKD 247 (262)
T ss_pred cCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCC
Confidence 589988653223578899999999999999999999998776555544433322221 23345778999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++.+
T Consensus 248 p~~Rpt~~~il~~ 260 (262)
T cd06613 248 PKKRPTATKLLQH 260 (262)
T ss_pred hhhCCCHHHHhcC
Confidence 9999999998753
No 207
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.05 E-value=3.3e-10 Score=107.55 Aligned_cols=90 Identities=18% Similarity=0.202 Sum_probs=65.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~i---P~~~p~~l~~LI~~CL~~D 77 (411)
||||++.....+.++.++|+||+||++|+|++|..||..................++. ...++..+.+++.+||+.+
T Consensus 173 ~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 252 (267)
T cd06645 173 MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKN 252 (267)
T ss_pred cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCC
Confidence 6899875322236788999999999999999999999766544333332222222221 1246788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|++||++++++++
T Consensus 253 P~~R~~~~~ll~~ 265 (267)
T cd06645 253 PKKRPTAEKLLQH 265 (267)
T ss_pred chhCcCHHHHhcC
Confidence 9999999998754
No 208
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.05 E-value=4.7e-10 Score=105.75 Aligned_cols=89 Identities=30% Similarity=0.483 Sum_probs=67.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCCCCCCC--CHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGL--PPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-~~ei~~~Il~~~~~p~iP~~~--p~~l~~LI~~CL~~D 77 (411)
+|||++.......++.++|+||||+++|++++|..||.... .......+. ....+.+|... +..+.+++.+||+.+
T Consensus 170 ~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~ 248 (264)
T cd06626 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG-AGHKPPIPDSLQLSPEGKDFLDRCLESD 248 (264)
T ss_pred cChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh-cCCCCCCCcccccCHHHHHHHHHHccCC
Confidence 57999876411237889999999999999999999998663 333333332 23344455544 889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++.+
T Consensus 249 p~~R~~~~~i~~~ 261 (264)
T cd06626 249 PKKRPTASELLQH 261 (264)
T ss_pred cccCCCHHHHhcC
Confidence 9999999998753
No 209
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.05 E-value=4.1e-10 Score=112.75 Aligned_cols=87 Identities=18% Similarity=0.215 Sum_probs=64.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------------------CCCC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--------------------EIPP--- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~--------------------~~p~--- 57 (411)
||||++.+. .++.++|+||+||++|+|++|..||.+.+.......+.... ..+.
T Consensus 189 ~aPE~~~~~---~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (359)
T cd07876 189 RAPEVILGM---GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPG 265 (359)
T ss_pred CCchhccCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCC
Confidence 689999865 78899999999999999999999998765443322221100 0000
Q ss_pred -----------------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----------------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+...++.+.+|+.+||+.||++|||+.+++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 266 ISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred cchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 011245678999999999999999999999875
No 210
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.05 E-value=3.5e-10 Score=108.09 Aligned_cols=86 Identities=22% Similarity=0.406 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELl-tG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... ..++.++|||||||++|||+ .|..||......+.... .... .......+.++.+|+.+||+.||.
T Consensus 175 ~aPE~~~~~--~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~li~~cl~~dp~ 249 (262)
T cd05077 175 IAPECVEDS--KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-YEGQ--CMLVTPSCKELADLMTHCMNYDPN 249 (262)
T ss_pred cChhhhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-HhcC--ccCCCCChHHHHHHHHHHcCCChh
Confidence 689988632 36888999999999999997 48888887655443322 1111 222333567899999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.+|++.+
T Consensus 250 ~Rp~~~~il~~~ 261 (262)
T cd05077 250 QRPFFRAIMRDI 261 (262)
T ss_pred hCcCHHHHHHhc
Confidence 999999998765
No 211
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.05 E-value=4e-10 Score=113.70 Aligned_cols=97 Identities=21% Similarity=0.364 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .|+.++|+|||||++|||++|..||...+..+.+..+........+|. .++.++.+|+.+||+ +|
T Consensus 215 ~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~ 290 (377)
T cd05629 215 IAPEIFLQQ---GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NA 290 (377)
T ss_pred cCHHHHccC---CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CH
Confidence 689998765 789999999999999999999999998887777776654333344443 478999999999998 67
Q ss_pred CCC---CCHHHHHHHHHhhhccccCCCCCCCC
Q 015234 79 RSR---PLMTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 79 ~~R---PSa~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
.+| +++.+++.+ +++.+.+|..+
T Consensus 291 ~~r~~r~~~~~~l~h------p~~~~~~~~~~ 316 (377)
T cd05629 291 ENRLGRGGAHEIKSH------PFFRGVDWDTI 316 (377)
T ss_pred hhcCCCCCHHHHhcC------CCcCCCCHHHH
Confidence 765 488887754 56666666554
No 212
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.04 E-value=4.1e-10 Score=105.60 Aligned_cols=96 Identities=20% Similarity=0.357 Sum_probs=73.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCC--CHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL--PPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~--p~~l~~LI~~CL~~DP 78 (411)
+|||++... .++.++|+||||+++|++++|..||......+....+.... ...+..+ +..+.+++.+||+.+|
T Consensus 168 ~~Pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p 242 (265)
T cd05579 168 IAPEVILGQ---GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK--IEWPEDVEVSDEAIDLISKLLVPDP 242 (265)
T ss_pred cCHHHhcCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC--cCCCccccCCHHHHHHHHHHhcCCH
Confidence 578887754 57889999999999999999999999888877777664322 3334444 8999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhccccCCCCC
Q 015234 79 RSRPLMTDILRVFKSSQNSVHSDGGW 104 (411)
Q Consensus 79 ~~RPSa~eIL~~Le~l~~~~~~~~~w 104 (411)
.+||++..+.+.| .+++|.+.+|
T Consensus 243 ~~Rpt~~~~~~~l---~~~~~~~~~~ 265 (265)
T cd05579 243 EKRLGAKSIEEIK---NHPFFKGIDW 265 (265)
T ss_pred hhcCCCccHHHHh---cCccccCCCC
Confidence 9999994444332 3456655554
No 213
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=3.3e-10 Score=115.70 Aligned_cols=86 Identities=23% Similarity=0.316 Sum_probs=75.2
Q ss_pred CCCccccCCCCCCCC-ccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCC-CHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGL-PPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys-~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~-p~~l~~LI~~CL~~DP 78 (411)
+|||++.... .|+ .++|+||+|++||.|++|..||...+...++.++.. ....+|..+ ++++..|+.+||..||
T Consensus 188 ~aPEvl~~~~--~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~--~~~~~p~~~~S~~~~~Li~~mL~~~P 263 (370)
T KOG0583|consen 188 AAPEVLSGKG--TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK--GEFKIPSYLLSPEARSLIEKMLVPDP 263 (370)
T ss_pred CCHHHhCCCC--CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc--CCccCCCCcCCHHHHHHHHHHcCCCc
Confidence 6999999862 154 789999999999999999999999988888888754 346678888 9999999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+|+++.+|+.+
T Consensus 264 ~~R~t~~~i~~h 275 (370)
T KOG0583|consen 264 STRITLLEILEH 275 (370)
T ss_pred ccCCCHHHHhhC
Confidence 999999999853
No 214
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.04 E-value=3.2e-10 Score=111.93 Aligned_cols=89 Identities=15% Similarity=0.247 Sum_probs=64.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------------- 55 (411)
||||++... ...|+.++|+|||||++|||++|..||..................
T Consensus 175 ~aPE~~~~~-~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T cd08227 175 LSPEVLQQN-LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSG 253 (327)
T ss_pred cChHHhhcc-cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCC
Confidence 689998753 125889999999999999999999999876543332221111000
Q ss_pred -------------------CCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 -------------------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 -------------------p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+....+++.+.+|+.+||+.||.+|||+.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 254 LGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred CCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 00112356789999999999999999999999874
No 215
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.04 E-value=3.1e-10 Score=110.06 Aligned_cols=89 Identities=27% Similarity=0.525 Sum_probs=75.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCCCCCC--CCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSG--LPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-~~ei~~~Il~~~~~p~iP~~--~p~~l~~LI~~CL~~D 77 (411)
||||.+.......|+..+|+||||++++||.||+.||.+.+ ..+.+.+++. .++|.+|.. +++.+.+++..||++|
T Consensus 258 MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd 336 (391)
T KOG0983|consen 258 MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKD 336 (391)
T ss_pred cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcC
Confidence 89999987655689999999999999999999999999864 4567777764 445555543 7999999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
+.+||...+++++
T Consensus 337 ~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 337 HRKRPKYNKLLEH 349 (391)
T ss_pred cccCcchHHHhcC
Confidence 9999999998874
No 216
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.04 E-value=3.7e-10 Score=107.57 Aligned_cols=91 Identities=22% Similarity=0.418 Sum_probs=70.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH--------------HHHHHHHhcCCCCCCCCCCCHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--------------EIYDAVVRRQEIPPIPSGLPPAV 66 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~--------------ei~~~Il~~~~~p~iP~~~p~~l 66 (411)
+|||++... .++.++|+||||+++|||++|..|+...... ......+......+.+..++.++
T Consensus 179 ~~Pe~~~~~---~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (284)
T cd05038 179 YAPECLRTS---KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEV 255 (284)
T ss_pred cCcHHHccC---CCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHH
Confidence 478888754 6788999999999999999999988753211 11122223344445566788999
Q ss_pred HHHHHHhhhhccCCCCCHHHHHHHHHhh
Q 015234 67 ENVLLGCFEYDLRSRPLMTDILRVFKSS 94 (411)
Q Consensus 67 ~~LI~~CL~~DP~~RPSa~eIL~~Le~l 94 (411)
.+++.+||..+|++||++.++++.|+.+
T Consensus 256 ~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 256 YDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 9999999999999999999999998754
No 217
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.03 E-value=4.9e-10 Score=112.09 Aligned_cols=97 Identities=22% Similarity=0.395 Sum_probs=76.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .|+.++|+|||||++|||++|..||...+..+....+.........|. .+++.+.+++.+|+. +|
T Consensus 206 ~aPE~~~~~---~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p 281 (364)
T cd05599 206 IAPEVFLQT---GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EA 281 (364)
T ss_pred cCHHHHcCC---CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CH
Confidence 689998765 789999999999999999999999999888777777654433334443 468999999999997 89
Q ss_pred CCCCC---HHHHHHHHHhhhccccCCCCCCCC
Q 015234 79 RSRPL---MTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 79 ~~RPS---a~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
.+|++ +.+++.+ +++...+|...
T Consensus 282 ~~R~~~~~~~~ll~h------~~~~~~~~~~~ 307 (364)
T cd05599 282 ERRLGNNGVNEIKSH------PFFKGVDWEHI 307 (364)
T ss_pred hhcCCCCCHHHHhcC------CCcCCCCHHHH
Confidence 99997 7777643 66666677653
No 218
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.03 E-value=4.7e-10 Score=107.00 Aligned_cols=88 Identities=18% Similarity=0.168 Sum_probs=65.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC----------------CCCCC------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ----------------EIPPI------ 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~----------------~~p~i------ 58 (411)
+|||++... ..++.++|+||+||++|||++|.+||...+..+....+.... .....
T Consensus 165 ~aPE~~~~~--~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (282)
T cd07831 165 RAPECLLTD--GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGT 242 (282)
T ss_pred CChhHhhcC--CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccc
Confidence 589977542 256889999999999999999999998876554443332100 00011
Q ss_pred -----CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 -----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 -----P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...++..+.+++.+||..+|++||++.+++++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 243 GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 12467899999999999999999999999864
No 219
>PTZ00284 protein kinase; Provisional
Probab=99.03 E-value=2.4e-10 Score=119.06 Aligned_cols=87 Identities=20% Similarity=0.223 Sum_probs=63.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------------- 55 (411)
||||++.+. .|+.++|||||||++|||++|++||.+.+..+.+..+......
T Consensus 312 ~APE~~~~~---~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (467)
T PTZ00284 312 RSPEVVLGL---GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLR 388 (467)
T ss_pred cCcHHhhcC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccccc
Confidence 799999875 7899999999999999999999999887654443322111000
Q ss_pred CCC-C--------------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 PPI-P--------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 p~i-P--------------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+.. + ....+.+.+||.+||++||.+|||+.|+++|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 389 PCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTH 438 (467)
T ss_pred ccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcC
Confidence 000 0 0013456799999999999999999999874
No 220
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.03 E-value=4.1e-10 Score=109.09 Aligned_cols=88 Identities=25% Similarity=0.301 Sum_probs=66.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-----------------C------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------------P------ 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p-----------------~------ 57 (411)
||||++.+. ..++.++|+||+||++|+|++|.+||.+.+..+....+......+ .
T Consensus 170 ~aPE~~~~~--~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (288)
T cd07871 170 RPPDVLLGS--TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRA 247 (288)
T ss_pred cChHHhcCC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCC
Confidence 689988653 367899999999999999999999999877665544432211000 0
Q ss_pred -----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....++.++.+|+.+||+.||.+|||+++++++
T Consensus 248 ~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 248 QPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred CchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 012467889999999999999999999999864
No 221
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.03 E-value=4.6e-10 Score=106.63 Aligned_cols=86 Identities=23% Similarity=0.402 Sum_probs=69.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .++.++|+||||+++|||++|..||...+.......+......+..|...+..+.+++.+|+. +|.+
T Consensus 176 ~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~ 251 (265)
T cd06652 176 MSPEVISGE---GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKL 251 (265)
T ss_pred cChhhhcCC---CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-Chhh
Confidence 689998764 678899999999999999999999987765555554443333455667788889999999995 8999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++++++++
T Consensus 252 Rp~~~~il~~ 261 (265)
T cd06652 252 RPSADELLRH 261 (265)
T ss_pred CCCHHHHhcC
Confidence 9999998764
No 222
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.03 E-value=2.5e-10 Score=112.25 Aligned_cols=89 Identities=24% Similarity=0.338 Sum_probs=63.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------------------------hcCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV--------------------------RRQE 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il--------------------------~~~~ 54 (411)
||||++... ...++.++|||||||++|||++|++||.+.+.......+. ....
T Consensus 173 ~aPE~~~~~-~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 251 (338)
T cd07859 173 RAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQ 251 (338)
T ss_pred CCHHHHhcc-ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccC
Confidence 689988652 2368889999999999999999999998765432221110 0000
Q ss_pred CCCC---CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 IPPI---PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 ~p~i---P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+. .+.+++.+.+++.+||+.||++||++++++++
T Consensus 252 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 252 PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 12467888999999999999999999999864
No 223
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=4.4e-11 Score=120.99 Aligned_cols=90 Identities=17% Similarity=0.275 Sum_probs=74.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCC--CCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEI--PPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-ei~~~Il~~~~~--p~iP~~~p~~l~~LI~~CL~~D 77 (411)
.|||++..+.+..|..++|+||+||++|-+++|.+||.+.... .+...|....+. |+.+..++.++.+||..+|..|
T Consensus 345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd 424 (475)
T KOG0615|consen 345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVD 424 (475)
T ss_pred cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC
Confidence 5999999874455666899999999999999999999987444 366777655543 3445669999999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|++||++.++|++
T Consensus 425 P~~R~s~~eaL~h 437 (475)
T KOG0615|consen 425 PENRPSADEALNH 437 (475)
T ss_pred cccCcCHHHHhcC
Confidence 9999999999875
No 224
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.03 E-value=4.7e-10 Score=106.72 Aligned_cols=89 Identities=30% Similarity=0.429 Sum_probs=67.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... ...++.++|+||+|+++|+|++|..||...... ............+.+|..+++++.+++.+||+.+|.
T Consensus 176 ~aPE~~~~~-~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 254 (268)
T cd06624 176 MAPEVIDKG-PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPD 254 (268)
T ss_pred cChhhhccc-cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCch
Confidence 589988653 124788999999999999999999999764322 222222112334566778899999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 255 ~Rpt~~~ll~~ 265 (268)
T cd06624 255 KRASAHDLLQD 265 (268)
T ss_pred hCCCHHHHHhC
Confidence 99999998764
No 225
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.03 E-value=6.6e-10 Score=111.47 Aligned_cols=87 Identities=18% Similarity=0.206 Sum_probs=65.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------------CC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------------------PP--- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~--------------------p~--- 57 (411)
||||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+...-.. +.
T Consensus 192 ~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (364)
T cd07875 192 RAPEVILGM---GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAG 268 (364)
T ss_pred CCHHHHhCC---CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCC
Confidence 689999865 7889999999999999999999999887665554444321100 00
Q ss_pred -----------------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----------------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+..+.+|+.+||+.||.+|||+.+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 269 YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 001134578899999999999999999999875
No 226
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.03 E-value=4.6e-10 Score=109.42 Aligned_cols=101 Identities=20% Similarity=0.315 Sum_probs=76.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++|||++|..||.+.+..+....+...... +..+..++.++.+++.+||+.+|+
T Consensus 183 ~aPE~~~~~---~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 259 (305)
T cd05609 183 IAPEVILRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPL 259 (305)
T ss_pred cCchhccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChh
Confidence 589988754 6889999999999999999999999988887777766543322 222335789999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccccCCCCCCCC
Q 015234 80 SRPLMTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
+||++.++.+.+ .++++...+|...
T Consensus 260 ~R~~~~~~~~ll---~~~~~~~~~~~~~ 284 (305)
T cd05609 260 ERLGTGGAFEVK---QHRFFLGLDWNGL 284 (305)
T ss_pred hccCccCHHHHH---hCccccCCCHHHH
Confidence 999865554443 3355555555543
No 227
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.03 E-value=4.5e-10 Score=105.17 Aligned_cols=86 Identities=31% Similarity=0.574 Sum_probs=72.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
++||.+.+. .++.++|+||+|+++|+|++|..||...+..+....+. ....+..+..++.++.+++.+||+.+|++
T Consensus 168 ~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 243 (256)
T cd08530 168 MAPEVWKGR---PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ-RGKYPPIPPIYSQDLQNFIRSMLQVKPKL 243 (256)
T ss_pred cCHHHHCCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh-cCCCCCCchhhCHHHHHHHHHHcCCCccc
Confidence 578888764 67889999999999999999999999888776666553 33445566678899999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rp~~~~~l~~ 253 (256)
T cd08530 244 RPNCDKILAS 253 (256)
T ss_pred CCCHHHHhcC
Confidence 9999999764
No 228
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.5e-10 Score=120.54 Aligned_cols=83 Identities=20% Similarity=0.257 Sum_probs=70.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
.|||++... .|+.++||||||++||+|++|..||...... +++..+. .+++...+|.++++|++.||+.||.
T Consensus 480 ~APEvl~~~---~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~----~~~~s~~vS~~AKdLl~~LL~~dP~ 552 (612)
T KOG0603|consen 480 VAPEVLAIQ---EYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQ----MPKFSECVSDEAKDLLQQLLQVDPA 552 (612)
T ss_pred cChhhhccC---CCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhc----CCccccccCHHHHHHHHHhccCChh
Confidence 389999865 8999999999999999999999999987555 5555552 2334478999999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.++..+
T Consensus 553 ~Rl~~~~i~~h 563 (612)
T KOG0603|consen 553 LRLGADEIGAH 563 (612)
T ss_pred hCcChhhhccC
Confidence 99999999865
No 229
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.02 E-value=6e-10 Score=107.67 Aligned_cols=90 Identities=20% Similarity=0.313 Sum_probs=68.3
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++.... ...++.++|+|||||++|+|++|..||...+.......+..... ....+..++.++.+++.+||..+
T Consensus 177 ~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 256 (292)
T cd06644 177 MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKH 256 (292)
T ss_pred cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCC
Confidence 5899885321 12577899999999999999999999987766555544432211 12235567889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|++||++++++++
T Consensus 257 p~~Rp~~~~il~~ 269 (292)
T cd06644 257 PETRPSAAQLLEH 269 (292)
T ss_pred cccCcCHHHHhcC
Confidence 9999999998764
No 230
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.02 E-value=5.6e-10 Score=107.41 Aligned_cols=86 Identities=26% Similarity=0.508 Sum_probs=66.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-----------HHHHHHHhcCCCCCCCCC-CCHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-----------EIYDAVVRRQEIPPIPSG-LPPAVEN 68 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-----------ei~~~Il~~~~~p~iP~~-~p~~l~~ 68 (411)
||||++... .++.++|+|||||++|++++|..||...... +....+.. ...+.++.. ++..+.+
T Consensus 169 ~aPE~~~~~---~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 244 (284)
T cd06620 169 MSPERIQGG---KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ-EPPPRLPSSDFPEDLRD 244 (284)
T ss_pred CCHHHHccC---CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh-ccCCCCCchhcCHHHHH
Confidence 589988754 6788999999999999999999999865431 22333322 222333333 7889999
Q ss_pred HHHHhhhhccCCCCCHHHHHHH
Q 015234 69 VLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 69 LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
|+.+||+.||++||++.+++++
T Consensus 245 li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 245 FVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HHHHHhcCCcccCcCHHHHhcC
Confidence 9999999999999999999875
No 231
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.02 E-value=5.4e-10 Score=103.88 Aligned_cols=87 Identities=29% Similarity=0.480 Sum_probs=70.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+... .++.++|+||+|+++|+|++|..||.... .......+......+.+|..++..+.+++.+|++.+|+
T Consensus 170 ~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~ 246 (260)
T cd06606 170 MAPEVIRGE---EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPK 246 (260)
T ss_pred cCHhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChh
Confidence 478888764 57889999999999999999999998765 33444444333344567778899999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 247 ~Rp~~~~ll~~ 257 (260)
T cd06606 247 KRPTADELLQH 257 (260)
T ss_pred hCCCHHHHhhC
Confidence 99999999864
No 232
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.02 E-value=5.9e-10 Score=109.54 Aligned_cols=90 Identities=17% Similarity=0.224 Sum_probs=69.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.....+.++.++|+||||+++|+|++|..||...+.......+............++..+.+++.+||+.+|.+
T Consensus 184 ~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~ 263 (313)
T cd06633 184 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQE 263 (313)
T ss_pred cChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhh
Confidence 68998853212367889999999999999999999998877666555554332222223457788999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 264 Rp~~~~~l~~ 273 (313)
T cd06633 264 RPASAELLRH 273 (313)
T ss_pred CcCHHHHhcC
Confidence 9999999864
No 233
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.02 E-value=6.8e-10 Score=106.80 Aligned_cols=87 Identities=23% Similarity=0.340 Sum_probs=68.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p-~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|+|++|..||...+.......+....... ..+..++..+.+++..||+.+|.
T Consensus 183 ~~PE~~~~~---~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 259 (286)
T cd06614 183 MAPEVIKRK---DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPE 259 (286)
T ss_pred CCHhHhcCC---CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChh
Confidence 579988754 67899999999999999999999999877665555443322211 12334788999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 260 ~Rpt~~~il~~ 270 (286)
T cd06614 260 KRPSAEELLQH 270 (286)
T ss_pred hCcCHHHHhhC
Confidence 99999999863
No 234
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.02 E-value=5.7e-10 Score=106.20 Aligned_cols=89 Identities=27% Similarity=0.529 Sum_probs=67.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS----GLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~----~~p~~l~~LI~~CL~~ 76 (411)
+|||++.... ..++.++|+||+|+++|++++|..||...........+......+.++. .++..+.+++.+||..
T Consensus 177 ~~PE~~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 255 (272)
T cd06629 177 MAPEVIHSYS-QGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTI 255 (272)
T ss_pred cCHHHhcccc-CCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcC
Confidence 5788877541 1378899999999999999999999987655544444332322333332 4688999999999999
Q ss_pred ccCCCCCHHHHHHH
Q 015234 77 DLRSRPLMTDILRV 90 (411)
Q Consensus 77 DP~~RPSa~eIL~~ 90 (411)
+|++||++.+++++
T Consensus 256 ~p~~Rps~~~il~~ 269 (272)
T cd06629 256 NPDNRPTARELLQH 269 (272)
T ss_pred ChhhCCCHHHHhhC
Confidence 99999999999865
No 235
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.02 E-value=5.6e-10 Score=105.47 Aligned_cols=86 Identities=31% Similarity=0.541 Sum_probs=67.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-----s~~ei~~~Il~~~~~p~iP~~-~p~~l~~LI~~CL 74 (411)
+|||++.+. .++.++|+||+|+++|+|++|..||... ...+....+. ....+..+.. ++.++.+++..||
T Consensus 166 ~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l 241 (265)
T cd06605 166 MAPERIQGN---DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCL 241 (265)
T ss_pred cCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHc
Confidence 689998765 7889999999999999999999999764 2333344433 2333444554 8889999999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
..+|.+||++.+++.+
T Consensus 242 ~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 242 IKDPRERPSYKELLEH 257 (265)
T ss_pred CCCchhCcCHHHHhhC
Confidence 9999999999999864
No 236
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.02 E-value=6.6e-10 Score=107.13 Aligned_cols=90 Identities=21% Similarity=0.270 Sum_probs=67.9
Q ss_pred CCCccccCCCC--CCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVR--GPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~--g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++..... ..++.++|+||+||++|||++|+.||...+.......+..... ....+...+..+.+++.+||+.+
T Consensus 195 ~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~ 274 (291)
T cd06639 195 MAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKD 274 (291)
T ss_pred cChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcC
Confidence 58998764311 1367899999999999999999999988776555554432211 11224557788999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|++||++.+++++
T Consensus 275 p~~Rps~~~il~~ 287 (291)
T cd06639 275 FEARPSVTHLLEH 287 (291)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999864
No 237
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.02 E-value=4.9e-10 Score=107.72 Aligned_cols=89 Identities=25% Similarity=0.419 Sum_probs=65.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPI----PSGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei~~~Il~~~~~p~i----P~~~p~~l~~LI~~CL~ 75 (411)
+|||++.......++.++|+||+|+++|+|++|..||..... .+....+.. ...+.. +..++.++.+|+.+||+
T Consensus 174 ~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~ 252 (288)
T cd06616 174 MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK-GDPPILSNSEEREFSPSFVNFINLCLI 252 (288)
T ss_pred cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC-CCCCcCCCcCCCccCHHHHHHHHHHcc
Confidence 589988753112578899999999999999999999976542 122222221 112222 23478899999999999
Q ss_pred hccCCCCCHHHHHHH
Q 015234 76 YDLRSRPLMTDILRV 90 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~ 90 (411)
.+|++||++.+++.+
T Consensus 253 ~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 253 KDESKRPKYKELLEH 267 (288)
T ss_pred CChhhCcCHHHHhcC
Confidence 999999999999874
No 238
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.01 E-value=6.7e-10 Score=106.57 Aligned_cols=91 Identities=20% Similarity=0.438 Sum_probs=68.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH---------------HHHHHHHhcCCCCCCCCCCCHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------------EIYDAVVRRQEIPPIPSGLPPA 65 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~---------------ei~~~Il~~~~~p~iP~~~p~~ 65 (411)
+|||++.+. .++.++|+||||+++|||+++..++...... .....++.....++.+..++..
T Consensus 178 ~aPE~~~~~---~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (284)
T cd05081 178 YAPESLTES---KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAE 254 (284)
T ss_pred eCHHHhccC---CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHH
Confidence 589988764 6888999999999999999987665432111 0011222333344556778999
Q ss_pred HHHHHHHhhhhccCCCCCHHHHHHHHHhh
Q 015234 66 VENVLLGCFEYDLRSRPLMTDILRVFKSS 94 (411)
Q Consensus 66 l~~LI~~CL~~DP~~RPSa~eIL~~Le~l 94 (411)
+.+|+.+||..+|++|||+.++++.|+.+
T Consensus 255 ~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 255 IYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 99999999999999999999999988754
No 239
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.01 E-value=7.5e-10 Score=106.57 Aligned_cols=91 Identities=20% Similarity=0.375 Sum_probs=67.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC--------------CHHHHHHHHHhcCCCCCCCCCCCHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------------SVDEIYDAVVRRQEIPPIPSGLPPAV 66 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~--------------s~~ei~~~Il~~~~~p~iP~~~p~~l 66 (411)
+|||++.+. .++.++|+||||+++|||+++..|.... ................+.+..++..+
T Consensus 179 ~apE~~~~~---~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (284)
T cd05079 179 YAPECLIQS---KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEV 255 (284)
T ss_pred cCHHHhccC---CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHH
Confidence 589988754 6788999999999999999976654321 00111112222333445567789999
Q ss_pred HHHHHHhhhhccCCCCCHHHHHHHHHhh
Q 015234 67 ENVLLGCFEYDLRSRPLMTDILRVFKSS 94 (411)
Q Consensus 67 ~~LI~~CL~~DP~~RPSa~eIL~~Le~l 94 (411)
.+|+.+||+.+|++||++.++++.|+.+
T Consensus 256 ~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 256 YQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999988754
No 240
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.01 E-value=5.7e-10 Score=110.98 Aligned_cols=87 Identities=21% Similarity=0.348 Sum_probs=64.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH-------------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV------------------------------- 49 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~I------------------------------- 49 (411)
||||++.+. .++.++|+|||||++|+|++|..||......+....+
T Consensus 169 ~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (333)
T cd06650 169 MSPERLQGT---HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDS 245 (333)
T ss_pred cCHHHhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccc
Confidence 689999764 6889999999999999999999999765433221110
Q ss_pred ------------HhcCCCCCCCC-CCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 50 ------------VRRQEIPPIPS-GLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 50 ------------l~~~~~p~iP~-~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......+..+. .++.++.+|+.+||+.||++||++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 246 RPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 00111122222 367889999999999999999999999874
No 241
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.01 E-value=6.9e-10 Score=106.42 Aligned_cols=86 Identities=17% Similarity=0.370 Sum_probs=71.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||+||++|+|++|..||...+.......+. ....+.++..++.++.+++.+||+.+|.+
T Consensus 168 ~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 243 (277)
T cd06641 168 MAPEVIKQS---AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVEACLNKEPSF 243 (277)
T ss_pred cChhhhccC---CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHccCChhh
Confidence 589988754 67889999999999999999999998877666655543 33344566778999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 244 Rp~~~~~l~~ 253 (277)
T cd06641 244 RPTAKELLKH 253 (277)
T ss_pred CcCHHHHHhC
Confidence 9999999884
No 242
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.01 E-value=6.5e-10 Score=107.04 Aligned_cols=86 Identities=23% Similarity=0.429 Sum_probs=66.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEML-TGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELl-tG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... ..++.++|+||||+++||++ +|..||......+....+ ... ...|...++.+.+++.+||+.+|+
T Consensus 187 ~aPe~~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 187 IAPECVPGG--NSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY-EKK--HRLPEPSCKELATLISQCLTYEPT 261 (274)
T ss_pred cCchhhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH-Hhc--cCCCCCCChHHHHHHHHHcccChh
Confidence 689988652 35789999999999999995 699999887655443322 222 334455667899999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 262 ~Rps~~~il~~L 273 (274)
T cd05076 262 QRPSFRTILRDL 273 (274)
T ss_pred hCcCHHHHHHhh
Confidence 999999998875
No 243
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.01 E-value=9.7e-10 Score=105.92 Aligned_cols=101 Identities=19% Similarity=0.280 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC---CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~---s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||++... ..++.++|+||+|+++|+|++|..||... ......... ....+..|..++..+.+++.+||..+
T Consensus 162 ~aPE~~~~~--~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~l~~~ 237 (278)
T cd05606 162 MAPEVLQKG--VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSPELRSLLEGLLQRD 237 (278)
T ss_pred cCcHHhcCC--CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hccCCCCCCcCCHHHHHHHHHHhhcC
Confidence 689998642 25788999999999999999999999876 223322222 22345567778999999999999999
Q ss_pred cCCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCC
Q 015234 78 LRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRI 111 (411)
Q Consensus 78 P~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~ 111 (411)
|.+|| ++.++++ ++++.+..|.......
T Consensus 238 p~~R~~~~~~~~~~ll~------~~~~~~~~~~~~~~~~ 270 (278)
T cd05606 238 VNRRLGCLGRGAQEVKE------HPFFRSLDWQMVFLQK 270 (278)
T ss_pred HHhccCCCCCCHHHHHh------CccccCCCchHhhhcc
Confidence 99999 8888864 3556666665554443
No 244
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.01 E-value=5.2e-10 Score=122.28 Aligned_cols=87 Identities=20% Similarity=0.350 Sum_probs=73.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .|+.++|||||||++|||++|..||.+....+.+..++..... +.....++..+.+++..||..||.
T Consensus 547 ~APE~l~~~---~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~~dP~ 623 (669)
T cd05610 547 LAPELLLGK---PHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLTMDPT 623 (669)
T ss_pred cCHHHcCCC---CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChh
Confidence 799999875 6899999999999999999999999998888888877654332 222345788899999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++++
T Consensus 624 ~R~ta~e~l~h 634 (669)
T cd05610 624 KRAGLKELKQH 634 (669)
T ss_pred HCcCHHHHHhC
Confidence 99999999875
No 245
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.01 E-value=6e-10 Score=107.77 Aligned_cols=86 Identities=22% Similarity=0.326 Sum_probs=69.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI--PSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~i--P~~~p~~l~~LI~~CL~~DP 78 (411)
||||++.+. .++.++|+||+|+++|+|++|..||...+.......+... ..+.. +..++..+.+++.+||+.+|
T Consensus 182 ~aPE~~~~~---~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p 257 (285)
T cd06648 182 MAPEVISRL---PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKLKNLHKVSPRLRSFLDRMLVRDP 257 (285)
T ss_pred cCHHHhcCC---CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCCcccccCCHHHHHHHHHHcccCh
Confidence 589988764 6889999999999999999999999887776666655432 22222 33478899999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
++||++.+++++
T Consensus 258 ~~Rpt~~~il~~ 269 (285)
T cd06648 258 AQRATAAELLNH 269 (285)
T ss_pred hhCcCHHHHccC
Confidence 999999998864
No 246
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.01 E-value=5.7e-10 Score=105.18 Aligned_cols=87 Identities=22% Similarity=0.420 Sum_probs=68.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-----CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-----SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP-----~~~p~~l~~LI~~CL~ 75 (411)
||||++... ..++.++|+||||+++|+|++|..||...+....+..+.... .+..+ ..++..+.+++.+||+
T Consensus 173 ~~Pe~~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~ 249 (267)
T cd06610 173 MAPEVMEQV--HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND-PPSLETGADYKKYSKSFRKMISLCLQ 249 (267)
T ss_pred cChHHHccc--cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC-CCCcCCccccccccHHHHHHHHHHcC
Confidence 579988753 257889999999999999999999999877666665554322 22222 2567899999999999
Q ss_pred hccCCCCCHHHHHHH
Q 015234 76 YDLRSRPLMTDILRV 90 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~ 90 (411)
.||++||++.+++++
T Consensus 250 ~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 250 KDPSKRPTAEELLKH 264 (267)
T ss_pred CChhhCcCHHHHhhC
Confidence 999999999999864
No 247
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.01 E-value=6.6e-10 Score=102.87 Aligned_cols=86 Identities=20% Similarity=0.387 Sum_probs=67.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCC--CCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG--LPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~--~p~~l~~LI~~CL~~DP 78 (411)
+|||++... .++.++|+||||+++|+|++|..||...+..+....... ...+..+.. ++..+.+++.+||+.||
T Consensus 164 ~~PE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p 239 (253)
T cd05122 164 MAPEVINGK---PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNP 239 (253)
T ss_pred cCHHHHcCC---CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCCh
Confidence 578988764 578899999999999999999999988755544444322 222333333 48899999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
++||++.+++++
T Consensus 240 ~~R~t~~~~l~~ 251 (253)
T cd05122 240 EKRPTAEQLLKH 251 (253)
T ss_pred hhCCCHHHHhcC
Confidence 999999998764
No 248
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.01 E-value=5.4e-10 Score=106.89 Aligned_cols=88 Identities=20% Similarity=0.101 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC----------------C---------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE----------------I--------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~----------------~--------- 55 (411)
||||++.+. ..++.++|+|||||++|+|++|.+||.+.+.......+..... .
T Consensus 168 ~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (285)
T cd07861 168 RAPEVLLGS--PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKG 245 (285)
T ss_pred cChHHhcCC--CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcc
Confidence 689988653 2578899999999999999999999987654333222111000 0
Q ss_pred --CCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 --PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 --p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......+++++.+++.+||+.||.+|||+.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 246 SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00123478899999999999999999999998754
No 249
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.01 E-value=1e-09 Score=104.60 Aligned_cols=91 Identities=22% Similarity=0.320 Sum_probs=66.0
Q ss_pred CCCccccCCCC----CCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcC-CC---CCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEVR----GPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ-EI---PPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~~----g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~-~~---p~iP~~~p~~l~~LI~ 71 (411)
||||++..... ..++.++|+||||+++|||++ |..||......+......... .. +......+..+.+++.
T Consensus 169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (269)
T cd05087 169 IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQ 248 (269)
T ss_pred cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHH
Confidence 68998864210 135789999999999999996 999998876665544332221 11 1222346788999999
Q ss_pred HhhhhccCCCCCHHHHHHHHH
Q 015234 72 GCFEYDLRSRPLMTDILRVFK 92 (411)
Q Consensus 72 ~CL~~DP~~RPSa~eIL~~Le 92 (411)
.|| .+|++||++++|+..|.
T Consensus 249 ~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 249 FCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHh-cCcccCCCHHHHHHHhc
Confidence 999 58999999999987753
No 250
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.01 E-value=6.5e-10 Score=106.40 Aligned_cols=90 Identities=21% Similarity=0.395 Sum_probs=69.8
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++.... ...++.++|+||+|+++|+|++|..||...+..+....+..... ....+..++.++.+++.+||+.+
T Consensus 170 ~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 249 (280)
T cd06611 170 MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKD 249 (280)
T ss_pred cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccC
Confidence 5788875321 12567899999999999999999999998877666655543221 12335668899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++++
T Consensus 250 p~~Rps~~~il~~ 262 (280)
T cd06611 250 PDDRPTAAELLKH 262 (280)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999764
No 251
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.01 E-value=5.7e-10 Score=106.98 Aligned_cols=90 Identities=21% Similarity=0.300 Sum_probs=67.5
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
||||++.... ...++.++|+||+||++|||++|..||...........+.... .....|..++..+.+++.+||+.|
T Consensus 191 ~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 270 (286)
T cd06638 191 MAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKD 270 (286)
T ss_pred cChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCC
Confidence 6899875321 1257889999999999999999999998776544443332211 111234557889999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|++||++.+++++
T Consensus 271 p~~Rps~~ell~~ 283 (286)
T cd06638 271 YEKRPTVSDLLQH 283 (286)
T ss_pred cccCCCHHHHhhc
Confidence 9999999999875
No 252
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.00 E-value=8.1e-10 Score=102.99 Aligned_cols=86 Identities=27% Similarity=0.556 Sum_probs=73.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||.+... .++.++|+||+|+++|+|++|..||...+..+....... ....++|..++..+.+++..||..+|++
T Consensus 170 ~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 245 (258)
T cd08215 170 LSPELCQNK---PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK-GQYPPIPSQYSSELRNLVSSLLQKDPEE 245 (258)
T ss_pred cChhHhccC---CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 578887754 678899999999999999999999998887777776643 3345667788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 246 Rp~~~~ll~~ 255 (258)
T cd08215 246 RPSIAQILQS 255 (258)
T ss_pred CcCHHHHhcC
Confidence 9999998764
No 253
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.00 E-value=8.7e-10 Score=103.73 Aligned_cols=86 Identities=26% Similarity=0.517 Sum_probs=70.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC---CHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR---SVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~---s~~ei~~~Il~~~~~p~iP~~-~p~~l~~LI~~CL~~ 76 (411)
+|||.+... .++.++|+||||+++|+|++|..||... ...+....+. ....+..+.. ++..+.+++..||..
T Consensus 167 ~~pE~~~~~---~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~ 242 (264)
T cd06623 167 MSPERIQGE---SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQK 242 (264)
T ss_pred cCHhhhCCC---CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccC
Confidence 589988764 6788999999999999999999999876 4445555554 3334455666 899999999999999
Q ss_pred ccCCCCCHHHHHHH
Q 015234 77 DLRSRPLMTDILRV 90 (411)
Q Consensus 77 DP~~RPSa~eIL~~ 90 (411)
+|++||++.+++++
T Consensus 243 ~p~~R~~~~~ll~~ 256 (264)
T cd06623 243 DPKKRPSAAELLQH 256 (264)
T ss_pred ChhhCCCHHHHHhC
Confidence 99999999999874
No 254
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.00 E-value=6.5e-10 Score=111.02 Aligned_cols=87 Identities=18% Similarity=0.192 Sum_probs=64.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------------C----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------------------P---- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~--------------------p---- 56 (411)
||||++.+. .++.++|+|||||++|+|++|..||.+.+..+....+...-.. +
T Consensus 185 ~aPE~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (355)
T cd07874 185 RAPEVILGM---GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 261 (355)
T ss_pred cCHHHHcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc
Confidence 689999865 6889999999999999999999999876654433322111000 0
Q ss_pred ----------------CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ----------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ----------------~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+...+..+.+|+.+||+.||++|||+.+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 262 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0011235678999999999999999999999875
No 255
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.99 E-value=1e-09 Score=105.36 Aligned_cols=90 Identities=23% Similarity=0.435 Sum_probs=68.9
Q ss_pred CCCccccCCC---CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH--hcCCCCCCCCCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV---RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVV--RRQEIPPIPSGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~---~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il--~~~~~p~iP~~~p~~l~~LI~~CL~ 75 (411)
+|||++.... ...++.++|+||+||++|+|++|..||...........+. .....+.++..+++++.+++.+||+
T Consensus 168 ~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 247 (286)
T cd06622 168 MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLN 247 (286)
T ss_pred cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcc
Confidence 5899885431 1245789999999999999999999998765444333221 1233455677799999999999999
Q ss_pred hccCCCCCHHHHHHH
Q 015234 76 YDLRSRPLMTDILRV 90 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~ 90 (411)
.+|++||++.+++.+
T Consensus 248 ~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 248 KIPNRRPTYAQLLEH 262 (286)
T ss_pred cCcccCCCHHHHhcC
Confidence 999999999999864
No 256
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=98.99 E-value=9.3e-10 Score=105.79 Aligned_cols=86 Identities=19% Similarity=0.373 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-------HHHHHHHHhcCCCCCC-CCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-------DEIYDAVVRRQEIPPI-PSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-------~ei~~~Il~~~~~p~i-P~~~p~~l~~LI~~ 72 (411)
+|||++... .++.++|+||||+++|+|++|..||..... ......+. ....+.. ....++++.+++.+
T Consensus 160 ~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~ 235 (279)
T cd06619 160 MAPERISGE---QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIV-DEDPPVLPVGQFSEKFVHFITQ 235 (279)
T ss_pred cCceeecCC---CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHh-ccCCCCCCCCcCCHHHHHHHHH
Confidence 689999865 688999999999999999999999975321 12222222 1122222 23478899999999
Q ss_pred hhhhccCCCCCHHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~ 90 (411)
||+.+|++||++++++++
T Consensus 236 ~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 236 CMRKQPKERPAPENLMDH 253 (279)
T ss_pred HhhCChhhCCCHHHHhcC
Confidence 999999999999999864
No 257
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.99 E-value=7.9e-10 Score=105.83 Aligned_cols=88 Identities=20% Similarity=0.185 Sum_probs=65.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------------- 55 (411)
||||++... ..++.++|+||||+++|+|++|..||...+.......+......
T Consensus 166 ~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (283)
T cd07835 166 RAPEILLGS--RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQ 243 (283)
T ss_pred CCCceeecC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccccc
Confidence 689988653 24688999999999999999999999876654433332211000
Q ss_pred --CCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 --PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 --p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......++..+.+++.+||+.+|.+||++++++.+
T Consensus 244 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 244 DLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred chhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 01124567889999999999999999999998754
No 258
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.99 E-value=8.2e-10 Score=104.41 Aligned_cols=86 Identities=21% Similarity=0.391 Sum_probs=70.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||.+... .++.++|+||+|+++|+|++|..||...+.......+. ....+..+..++.++.+++.+||..+|++
T Consensus 172 ~~pe~~~~~---~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 247 (260)
T cd08222 172 MSPEALKHQ---GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLPETYSRQLNSIMQSMLNKDPSL 247 (260)
T ss_pred cCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCCCCcchhcHHHHHHHHHHhcCChhh
Confidence 478887653 67889999999999999999999998777666665553 34445566778899999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++++
T Consensus 248 Rp~~~~il~~ 257 (260)
T cd08222 248 RPSAAEILRN 257 (260)
T ss_pred CcCHHHHhhC
Confidence 9999999864
No 259
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=98.99 E-value=9.3e-10 Score=110.08 Aligned_cols=89 Identities=19% Similarity=0.337 Sum_probs=66.1
Q ss_pred CCCccccCCC-CC-CCCccccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV-RG-PISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~-~g-~ys~ksDIWSlGviLyELltG~~Pf~~~s~---~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~ 75 (411)
||||++.... .+ .++.++|||||||++|||++|+.||..... ......+. ....+..+..++.++.+||.+||+
T Consensus 235 ~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~ 313 (353)
T PLN00034 235 MSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQ 313 (353)
T ss_pred cCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHcc
Confidence 6899885321 11 234689999999999999999999974322 22222222 233455567789999999999999
Q ss_pred hccCCCCCHHHHHHH
Q 015234 76 YDLRSRPLMTDILRV 90 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~ 90 (411)
.||++||++.+++++
T Consensus 314 ~~P~~Rpt~~ell~h 328 (353)
T PLN00034 314 REPAKRWSAMQLLQH 328 (353)
T ss_pred CChhhCcCHHHHhcC
Confidence 999999999999875
No 260
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.99 E-value=8.7e-10 Score=106.43 Aligned_cols=99 Identities=18% Similarity=0.295 Sum_probs=71.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD--EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~--ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... ..++.++|+||+||++|+|++|..||...... ...... .......+|..++.++.+++.+||..||
T Consensus 162 ~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p 238 (279)
T cd05633 162 MAPEVLQKG--TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPELKSLLEGLLQRDV 238 (279)
T ss_pred cCHHHhcCC--CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHHHHHHHHHHhcCCH
Confidence 689988632 25788999999999999999999999754221 112221 1123345677789999999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhhccccCCCCCCCCC
Q 015234 79 RSRP-----LMTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 79 ~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
.+|+ ++.+++++ ++|.+..|....
T Consensus 239 ~~R~~~~~~~~~~~~~h------~~~~~~~~~~~~ 267 (279)
T cd05633 239 SKRLGCLGRGAQEVKEH------VFFKGIDWQQVY 267 (279)
T ss_pred HHhcCCCCCCHHHHHhC------ccccCCCHhHHh
Confidence 9999 58777654 566665555443
No 261
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.99 E-value=9.3e-10 Score=105.40 Aligned_cols=88 Identities=23% Similarity=0.211 Sum_probs=64.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
+|||++.+. ..++.++|+||||+++|||++|..||...+.......+......+
T Consensus 167 ~aPE~~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07860 167 RAPEILLGC--KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQ 244 (284)
T ss_pred cCCeEEecC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhccccccc
Confidence 589988753 246788999999999999999999998765544333322111000
Q ss_pred ---CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ---~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+++++.+++.+||+.||.+||++++++.+
T Consensus 245 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 245 DFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred CHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0123467889999999999999999999998754
No 262
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.98 E-value=5.8e-10 Score=112.71 Aligned_cols=96 Identities=20% Similarity=0.247 Sum_probs=73.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~DP 78 (411)
||||++.+. .|+.++|+||+||++|||++|..||...+..+....+.........| ..+++++.+++.+++ .+|
T Consensus 215 ~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p 290 (382)
T cd05625 215 IAPEVLLRT---GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGP 290 (382)
T ss_pred CCHHHhcCC---CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCH
Confidence 699999865 78999999999999999999999999888776666665433333333 457899999998876 589
Q ss_pred CCCCC---HHHHHHHHHhhhccccCCCCCCC
Q 015234 79 RSRPL---MTDILRVFKSSQNSVHSDGGWTG 106 (411)
Q Consensus 79 ~~RPS---a~eIL~~Le~l~~~~~~~~~w~~ 106 (411)
.+|++ +.+++. +++|...+|..
T Consensus 291 ~~R~~~~~~~ei~~------hp~f~~~~~~~ 315 (382)
T cd05625 291 EDRLGKNGADEIKA------HPFFKTIDFSS 315 (382)
T ss_pred hHcCCCCCHHHHhc------CCCcCCcChHH
Confidence 99997 776654 36666666654
No 263
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.98 E-value=6.5e-10 Score=111.99 Aligned_cols=88 Identities=19% Similarity=0.204 Sum_probs=66.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------------cCCCC-
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR-----------------------RQEIP- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~-----------------------~~~~p- 56 (411)
||||++.+. ..|+.++|+||+||++|||++|+.||.+.+..+....+.. ....+
T Consensus 171 ~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (372)
T cd07853 171 RAPEILMGS--RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPP 248 (372)
T ss_pred CCHHHHcCC--CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCC
Confidence 689988753 2578899999999999999999999988765544433321 11111
Q ss_pred ------CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ------~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......++++.+|+.+||+.||.+|||+.+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 249 SLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred chHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 1223467889999999999999999999999864
No 264
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.98 E-value=1.8e-09 Score=107.15 Aligned_cols=102 Identities=19% Similarity=0.308 Sum_probs=75.8
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP---~~~p~~l~~LI~~CL~ 75 (411)
||||++.... ...++.++|+|||||++|||++|..||...+..+.+..+........+| ..+++++.+|+.+|+.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~ 249 (332)
T cd05623 170 ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLIC 249 (332)
T ss_pred cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHcc
Confidence 6899886311 1357889999999999999999999999988888887776544333333 4578999999999886
Q ss_pred hccCC--CCCHHHHHHHHHhhhccccCCCCCCCCC
Q 015234 76 YDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 76 ~DP~~--RPSa~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
.++.. |+++.+++++ ++|.+.+|..+.
T Consensus 250 ~~~~r~~r~~~~~~~~h------~~f~~~~~~~~~ 278 (332)
T cd05623 250 SREHRLGQNGIEDFKQH------PFFTGIDWDNIR 278 (332)
T ss_pred ChhhhcCCCCHHHHhCC------CCcCCCCHHHHh
Confidence 54433 5788887654 667777776543
No 265
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=98.97 E-value=1.1e-09 Score=110.98 Aligned_cols=113 Identities=17% Similarity=0.263 Sum_probs=80.5
Q ss_pred CCCccccCCC-CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC--CCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS--GLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~-~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~--~~p~~l~~LI~~CL~~D 77 (411)
||||++.... .+.++.++|+||+||++|||++|..||...+....+..+........+|. .++..+++++..||+.+
T Consensus 210 ~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~ 289 (370)
T cd05621 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDR 289 (370)
T ss_pred CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCc
Confidence 7899987531 12378899999999999999999999999888777777765443344444 46899999999999855
Q ss_pred cCC--CCCHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 78 LRS--RPLMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 78 P~~--RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
+.. |+++.+++++ +++....|.....+...++..|.
T Consensus 290 ~~r~~R~~~~e~l~h------p~~~~~~~~~~~~~~~~~~~~p~ 327 (370)
T cd05621 290 EVRLGRNGVEEIKQH------PFFKNDQWNWDNIRETAAPVVPE 327 (370)
T ss_pred hhccCCCCHHHHhcC------cccCCCCcChHhcCCCCCCcCCC
Confidence 533 8899988764 55655555443333444444444
No 266
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.97 E-value=6.5e-10 Score=112.01 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=74.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|||||||++|||++|..||...+..+....+.........| ..+++++.+++.+|+ .+|
T Consensus 211 ~aPE~~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p 286 (376)
T cd05598 211 IAPEVLLRT---GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGA 286 (376)
T ss_pred cCHHHHcCC---CCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCH
Confidence 789999865 78899999999999999999999999888776666554332222333 358899999999876 599
Q ss_pred CCCC---CHHHHHHHHHhhhccccCCCCCCCC
Q 015234 79 RSRP---LMTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 79 ~~RP---Sa~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
.+|+ ++.+++++ +++...+|...
T Consensus 287 ~~R~~~~t~~ell~h------~~~~~~~~~~~ 312 (376)
T cd05598 287 EDRLGKNGADEIKAH------PFFKGIDFASL 312 (376)
T ss_pred hhcCCCCCHHHHhCC------CCcCCCCHHHH
Confidence 9999 78888754 55555555444
No 267
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=98.97 E-value=1.1e-09 Score=104.68 Aligned_cols=89 Identities=25% Similarity=0.513 Sum_probs=66.0
Q ss_pred CCCccccCCCC-CCCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVR-GPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPIP-SGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~-g~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~Il~~~~~p~iP-~~~p~~l~~LI~~CL~~D 77 (411)
+|||++.+... ..++.++|+||+||++|+|++|..||... ...+....+.. ...+.+| ..++.++.+++.+||..+
T Consensus 170 ~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~ 248 (283)
T cd06617 170 MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE-EPSPQLPAEKFSPEFQDFVNKCLKKN 248 (283)
T ss_pred cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh-cCCCCCCccccCHHHHHHHHHHccCC
Confidence 58998864211 35788999999999999999999999753 22233333322 2233333 357899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++.+
T Consensus 249 p~~Rp~~~~il~~ 261 (283)
T cd06617 249 YKERPNYPELLQH 261 (283)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999863
No 268
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.97 E-value=1.1e-09 Score=110.89 Aligned_cols=90 Identities=20% Similarity=0.316 Sum_probs=69.0
Q ss_pred CCCccccCCC-CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~-~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~D 77 (411)
||||++.... .+.++.++|+||+||++|||++|..||...+....+..+........+| ..++..+.+++..||..+
T Consensus 210 ~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~ 289 (371)
T cd05622 210 ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 289 (371)
T ss_pred cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCCh
Confidence 7899987531 1237889999999999999999999999988877777776543333333 468999999999999843
Q ss_pred cCC--CCCHHHHHHH
Q 015234 78 LRS--RPLMTDILRV 90 (411)
Q Consensus 78 P~~--RPSa~eIL~~ 90 (411)
+.+ |+++.+++++
T Consensus 290 ~~r~~r~~~~ei~~h 304 (371)
T cd05622 290 EVRLGRNGVEEIKRH 304 (371)
T ss_pred hhhcCCCCHHHHhcC
Confidence 332 6788888765
No 269
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.97 E-value=1.4e-09 Score=103.40 Aligned_cols=86 Identities=27% Similarity=0.437 Sum_probs=70.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++.+. .++.++|+|||||++|++++|..||...........+......+.+|..+++.+.+++.+||+ +|..
T Consensus 176 ~aPE~~~~~---~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~ 251 (264)
T cd06653 176 MSPEVISGE---GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKR 251 (264)
T ss_pred cCHhhhcCC---CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-Cccc
Confidence 589988764 578899999999999999999999988766655555544444556788899999999999999 4799
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 252 r~~~~~~~~~ 261 (264)
T cd06653 252 RPTAEFLLRH 261 (264)
T ss_pred CccHHHHhcC
Confidence 9999988754
No 270
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=98.97 E-value=8.5e-10 Score=105.29 Aligned_cols=87 Identities=18% Similarity=0.323 Sum_probs=67.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSG-LPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~-~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... ..++.++|+||||+++|+|++|..||...+.......+. ....+.++.. ++.++.+++.+||+.||+
T Consensus 168 ~aPE~~~~~--~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 244 (277)
T cd06917 168 MAPEVITEG--KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP-KSKPPRLEDNGYSKLLREFVAACLDEEPK 244 (277)
T ss_pred eCHHHhccC--CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc-cCCCCCCCcccCCHHHHHHHHHHcCCCcc
Confidence 589987642 246889999999999999999999998876655444332 2222334433 788999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 245 ~R~~~~~il~~ 255 (277)
T cd06917 245 ERLSAEELLKS 255 (277)
T ss_pred cCcCHHHHhhC
Confidence 99999999863
No 271
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=98.97 E-value=1.1e-09 Score=103.66 Aligned_cols=87 Identities=30% Similarity=0.514 Sum_probs=68.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~---~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++.+. .++.++|+||+|+++|+|++|..||..... ......+......+..|..+++++.+++.+||..+
T Consensus 175 ~~PE~~~~~---~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 251 (268)
T cd06630 175 MAPEVLRGE---QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQ 251 (268)
T ss_pred eCHhHhccC---CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCC
Confidence 589988764 678899999999999999999999975432 22222332233445667778899999999999999
Q ss_pred cCCCCCHHHHHHH
Q 015234 78 LRSRPLMTDILRV 90 (411)
Q Consensus 78 P~~RPSa~eIL~~ 90 (411)
|.+||++.+++++
T Consensus 252 p~~R~~~~~ll~~ 264 (268)
T cd06630 252 PEDRPPSRELLKH 264 (268)
T ss_pred cccCcCHHHHhcC
Confidence 9999999998754
No 272
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=7.7e-10 Score=116.79 Aligned_cols=89 Identities=25% Similarity=0.407 Sum_probs=76.6
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p--~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++.+.. ..+|++++||||||++|.||..+.+|-...++...+-+|.. ..+| ..|+..+..+.+|+.+||..
T Consensus 197 MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK-SePPTLlqPS~Ws~~F~DfLk~cL~K 275 (1187)
T KOG0579|consen 197 MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK-SEPPTLLQPSHWSRSFSDFLKRCLVK 275 (1187)
T ss_pred ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh-cCCCcccCcchhhhHHHHHHHHHHhc
Confidence 8999998752 23899999999999999999999999999999998888753 3333 34778889999999999999
Q ss_pred ccCCCCCHHHHHHH
Q 015234 77 DLRSRPLMTDILRV 90 (411)
Q Consensus 77 DP~~RPSa~eIL~~ 90 (411)
||+.||++.+|++|
T Consensus 276 np~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 276 NPRNRPPAAQLLKH 289 (1187)
T ss_pred CCccCCCHHHHhhC
Confidence 99999999999874
No 273
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=98.97 E-value=1.1e-09 Score=108.21 Aligned_cols=95 Identities=19% Similarity=0.319 Sum_probs=67.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------------------- 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-------------------------- 54 (411)
||||++... ...++.++|+||+||++|||++|..||.................
T Consensus 175 ~aPE~~~~~-~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (328)
T cd08226 175 LSPELLRQD-LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSG 253 (328)
T ss_pred cChhhhcCC-CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcc
Confidence 689998753 22478899999999999999999999987654433322211100
Q ss_pred -------------------CCCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHH--HHHhhhc
Q 015234 55 -------------------IPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR--VFKSSQN 96 (411)
Q Consensus 55 -------------------~p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~--~Le~l~~ 96 (411)
..+.+..++..+.+|+.+||+.||.+|||+.++++ .|....+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 254 IGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred cccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 00111235677899999999999999999999987 4444333
No 274
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.97 E-value=1.4e-09 Score=108.06 Aligned_cols=101 Identities=20% Similarity=0.319 Sum_probs=73.4
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP---~~~p~~l~~LI~~CL~ 75 (411)
||||++.... .+.++.++|+||+||++|||++|..||...+..+.+..+.......++| ..+++++.+++.+|++
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~ 249 (331)
T cd05624 170 ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLIC 249 (331)
T ss_pred CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHcc
Confidence 6899886421 1257889999999999999999999999888777777765444333344 3468999999999998
Q ss_pred hccCC--CCCHHHHHHHHHhhhccccCCCCCCCC
Q 015234 76 YDLRS--RPLMTDILRVFKSSQNSVHSDGGWTGH 107 (411)
Q Consensus 76 ~DP~~--RPSa~eIL~~Le~l~~~~~~~~~w~~l 107 (411)
.++++ |+++++++++ .+|...+|...
T Consensus 250 ~~~~~~~~~~~~~~~~h------~~f~~~~~~~~ 277 (331)
T cd05624 250 SRERRLGQNGIEDFKKH------AFFEGIDWENI 277 (331)
T ss_pred CchhhcCCCCHHHHhcC------CCcCCCCHHHH
Confidence 65543 3467666543 56666667654
No 275
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.96 E-value=1.3e-09 Score=105.59 Aligned_cols=89 Identities=26% Similarity=0.502 Sum_probs=66.7
Q ss_pred CCCccccCCC-CCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~-~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~ 76 (411)
+|||++.... .+.++.++|+||||+++|+|++|+.||..... .+.+..+.... .+..+ ..++.++.+|+.+||..
T Consensus 181 ~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~ 259 (296)
T cd06618 181 MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-PPSLPPNEGFSPDFCSFVDLCLTK 259 (296)
T ss_pred cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHHHHccC
Confidence 5899887531 13478899999999999999999999976432 33444443222 22222 34788999999999999
Q ss_pred ccCCCCCHHHHHHH
Q 015234 77 DLRSRPLMTDILRV 90 (411)
Q Consensus 77 DP~~RPSa~eIL~~ 90 (411)
||.+||++.+++.+
T Consensus 260 ~p~~Rp~~~~il~~ 273 (296)
T cd06618 260 DHRKRPKYRELLQH 273 (296)
T ss_pred ChhhCCCHHHHhcC
Confidence 99999999999874
No 276
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.96 E-value=1.2e-09 Score=106.41 Aligned_cols=86 Identities=20% Similarity=0.268 Sum_probs=68.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~--iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|+||+|+++|||++|..||...+.......+.. ...+. ....++..+.+++.+||..||
T Consensus 185 ~aPE~~~~~---~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P 260 (292)
T cd06658 185 MAPEVISRL---PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-NLPPRVKDSHKVSSVLRGFLDLMLVREP 260 (292)
T ss_pred cCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCccccccccCHHHHHHHHHHccCCh
Confidence 689988764 678899999999999999999999998776665554432 22222 223578899999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+||++.+++++
T Consensus 261 ~~Rpt~~~il~~ 272 (292)
T cd06658 261 SQRATAQELLQH 272 (292)
T ss_pred hHCcCHHHHhhC
Confidence 999999999864
No 277
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.96 E-value=1.3e-09 Score=106.21 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=69.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+|||||++|||++|..||...+..+....+..... ....+..++..+.+++.+||+.+|.
T Consensus 184 ~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~ 260 (297)
T cd06659 184 MAPEVISRT---PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQ 260 (297)
T ss_pred cCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcc
Confidence 689998765 678899999999999999999999988776665554432111 1122345788999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++++++++
T Consensus 261 ~Rps~~~ll~~ 271 (297)
T cd06659 261 ERATAQELLDH 271 (297)
T ss_pred cCcCHHHHhhC
Confidence 99999999874
No 278
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=98.96 E-value=9.6e-10 Score=107.41 Aligned_cols=88 Identities=19% Similarity=0.324 Sum_probs=66.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------------CC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------------------PP--- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~--------------------p~--- 57 (411)
+|||++.+. ..++.++|+||+||++|+|++|..||.+.+..+....+...-.. +.
T Consensus 171 ~aPE~~~~~--~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (309)
T cd07872 171 RPPDVLLGS--SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKP 248 (309)
T ss_pred cCCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCC
Confidence 589988653 35788999999999999999999999887655444333211000 00
Q ss_pred -----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....+++++.+|+.+||+.||.+|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 249 QPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred CchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 112467889999999999999999999999864
No 279
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=98.95 E-value=1e-09 Score=106.99 Aligned_cols=88 Identities=18% Similarity=0.234 Sum_probs=62.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCCC---------------------C
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPP---------------------I 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei~~~Il~~~~~p~---------------------i 58 (411)
||||++.+. ..++.++|+||+||++|+|++|..||.+... .+.+..+......+. .
T Consensus 170 ~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (303)
T cd07869 170 RPPDVLLGS--TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYS 247 (303)
T ss_pred CChHHHcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccC
Confidence 689988653 2578899999999999999999999987532 222222211000000 0
Q ss_pred C---------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 P---------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 P---------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+ ...+..+.+|+.+||+.||.+|||+.+++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 248 PKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred CccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 0 1245678899999999999999999999764
No 280
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.95 E-value=2.9e-09 Score=101.74 Aligned_cols=90 Identities=19% Similarity=0.318 Sum_probs=67.3
Q ss_pred CCCccccCCC----CCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC----CCCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEV----RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IPPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~----~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~----~p~iP~~~p~~l~~LI~ 71 (411)
+|||++.... ...++.++|+||||+++|||++ +..||...+..+.+..+..... .+.++..+++.+.+++.
T Consensus 168 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 247 (268)
T cd05086 168 LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQ 247 (268)
T ss_pred cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHH
Confidence 5899875321 1135678999999999999997 6789988777666665543321 23344557889999999
Q ss_pred HhhhhccCCCCCHHHHHHHH
Q 015234 72 GCFEYDLRSRPLMTDILRVF 91 (411)
Q Consensus 72 ~CL~~DP~~RPSa~eIL~~L 91 (411)
.|| .+|++||+++++++.|
T Consensus 248 ~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 248 FCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred HHh-hCcccCCCHHHHHHHh
Confidence 999 5799999999998875
No 281
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=98.95 E-value=1.2e-09 Score=106.12 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=65.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-----------------CCCC-----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-----------------IPPI----- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-----------------~p~i----- 58 (411)
+|||++.+. ..++.++|+||+|+++|+|++|.+||...+..+....+...-. ....
T Consensus 171 ~~PE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (301)
T cd07873 171 RPPDILLGS--TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRA 248 (301)
T ss_pred cCcHHHhCC--CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCcccc
Confidence 589988653 2578899999999999999999999998766544433221100 0001
Q ss_pred ------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 ------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 ------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+++.+.+|+.+||+.||.+|||+.+++++
T Consensus 249 ~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 249 DCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 13467889999999999999999999999864
No 282
>PHA02882 putative serine/threonine kinase; Provisional
Probab=98.95 E-value=1.2e-09 Score=106.45 Aligned_cols=85 Identities=6% Similarity=0.057 Sum_probs=65.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHH--------HHHHHhcCCCCCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEI--------YDAVVRRQEIPPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei--------~~~Il~~~~~p~iP~~~p~~l~~LI~ 71 (411)
||||++.+. .++.++||||+||++|||++|..||.+... ... ...+.... ..+..+++.+.+++.
T Consensus 200 ~ape~~~~~---~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 273 (294)
T PHA02882 200 AGLDAHNGA---CVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGK---IKIKNANKFIYDFIE 273 (294)
T ss_pred cCHHHhCCC---CCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhh---hccCCCCHHHHHHHH
Confidence 688888765 789999999999999999999999987632 221 12221111 123457889999999
Q ss_pred HhhhhccCCCCCHHHHHHHH
Q 015234 72 GCFEYDLRSRPLMTDILRVF 91 (411)
Q Consensus 72 ~CL~~DP~~RPSa~eIL~~L 91 (411)
.|+..+|++||++.++++.|
T Consensus 274 ~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 274 CVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhCCCCCCCCHHHHHHhh
Confidence 99999999999999998765
No 283
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.95 E-value=1.2e-09 Score=104.33 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=66.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-----------------CCC-----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-----------------PPI----- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-----------------p~i----- 58 (411)
+|||++.+. .++.++|+|||||++|+|++|.+||...+..+...++...... +..
T Consensus 173 ~~PE~~~~~---~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (287)
T cd07838 173 RAPEVLLQS---SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSF 249 (287)
T ss_pred cChHHhccC---CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccch
Confidence 589998765 6788999999999999999999999987766655544321100 000
Q ss_pred ---CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 ---PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 ---P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+..++.+.+++.+||+.||.+||++.+++.+
T Consensus 250 ~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 250 KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 11345678899999999999999999998754
No 284
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.95 E-value=2.5e-10 Score=128.13 Aligned_cols=89 Identities=27% Similarity=0.390 Sum_probs=77.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+........+.||||+||++.||+||+.||...+.. .+.+++ ..+..|++|..++.+.++++..||+.||.
T Consensus 1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V-~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~ 1483 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHV-AAGHKPQIPERLSSEGRDFLEHCLEQDPK 1483 (1509)
T ss_pred cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHH-hccCCCCCchhhhHhHHHHHHHHHhcCch
Confidence 8999998764345677999999999999999999999987544 667776 45677999999999999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+|.++.||+++
T Consensus 1484 ~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1484 MRWTASQLLEH 1494 (1509)
T ss_pred hhhHHHHHHHh
Confidence 99999988875
No 285
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.94 E-value=1.1e-09 Score=104.85 Aligned_cols=88 Identities=18% Similarity=0.254 Sum_probs=62.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhcC------------------CCCC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRC-GRSVDEIYDAVVRRQ------------------EIPP---- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~-~~s~~ei~~~Il~~~------------------~~p~---- 57 (411)
+|||++.+. ..++.++|+||+||++|+|++|..|+. +.+..+.+..+.... ..+.
T Consensus 166 ~aPE~~~~~--~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd07839 166 RPPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPAT 243 (284)
T ss_pred cChHHHhCC--cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCc
Confidence 689988753 257889999999999999999888754 334333332221100 0000
Q ss_pred -----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....+++++.+++.+||+.||.+|||+++++.+
T Consensus 244 ~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 244 TSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred chhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 113467889999999999999999999999764
No 286
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.94 E-value=1.4e-09 Score=104.14 Aligned_cols=88 Identities=24% Similarity=0.323 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--------------------CC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE--------------------IP---- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~--------------------~p---- 56 (411)
+|||++... ..++.++|+||||+++|||++|.+||...+..+....+..... .+
T Consensus 167 ~aPE~~~~~--~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07846 167 RAPELLVGD--TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKE 244 (286)
T ss_pred cCcHHhccc--cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccC
Confidence 589988643 2567899999999999999999999986654433322221000 00
Q ss_pred -----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 -----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 -----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+.++..+.+++.+||..+|++||++.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 245 IEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0123567889999999999999999999998764
No 287
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.93 E-value=1.7e-09 Score=105.54 Aligned_cols=88 Identities=24% Similarity=0.292 Sum_probs=67.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-----------------CCC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------------PIP---- 59 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p-----------------~iP---- 59 (411)
+|||++.+. ..++.++|+||+||++|||++|.+||.+.+..+.+..+......+ ..+
T Consensus 175 ~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (309)
T cd07845 175 RAPELLLGC--TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPY 252 (309)
T ss_pred cChhhhcCC--CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCC
Confidence 589988653 257889999999999999999999999887766665543311000 000
Q ss_pred -------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 -------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 -------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...++.+.+++.+||+.||++||++.+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 253 NNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred CchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1257888999999999999999999999864
No 288
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.93 E-value=2.3e-09 Score=100.09 Aligned_cols=86 Identities=31% Similarity=0.640 Sum_probs=70.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||.+... .++.++|+|++|+++|+|++|..||...+......... ....+.++..++..+.+++.+||..+|++
T Consensus 166 ~~pe~~~~~---~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 241 (254)
T cd06627 166 MAPEVIEMS---GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNL 241 (254)
T ss_pred cCHhhhcCC---CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhh
Confidence 578988764 57889999999999999999999998876655555443 33445667788999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
||++.+++.+
T Consensus 242 R~~~~~~l~~ 251 (254)
T cd06627 242 RPTAKQLLKH 251 (254)
T ss_pred CcCHHHHhcC
Confidence 9999998753
No 289
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=98.93 E-value=1.5e-09 Score=103.76 Aligned_cols=88 Identities=22% Similarity=0.302 Sum_probs=64.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-------------------CCCCC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-------------------EIPPI--- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-------------------~~p~i--- 58 (411)
+|||++.+. ..++.++|+||+|+++|+|++|..||.+.+..+....+.... ...+.
T Consensus 167 ~aPE~~~~~--~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07847 167 RAPELLVGD--TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPET 244 (286)
T ss_pred CCHHHHhCC--CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCccc
Confidence 579987653 257889999999999999999999998776544333221100 00000
Q ss_pred -------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 -------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 -------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...++..+.+|+.+||+.+|++||++.+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 245 REPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred ccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 12467889999999999999999999998754
No 290
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.93 E-value=1.2e-09 Score=113.28 Aligned_cols=83 Identities=16% Similarity=0.290 Sum_probs=74.8
Q ss_pred CCccccCCCCCCCC-ccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 2 APEQWQPEVRGPIS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 2 APEvl~~~~~g~ys-~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
|||++.+. .|+ +++||||||+|||.|++|++||...+..+.+..|+..+ ..+|..++.++++||..||..||.+
T Consensus 186 APEILLGD---sYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCK--YtvPshvS~eCrdLI~sMLvRdPkk 260 (864)
T KOG4717|consen 186 APEILLGD---SYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCK--YTVPSHVSKECRDLIQSMLVRDPKK 260 (864)
T ss_pred CchhhhcC---ccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccc--ccCchhhhHHHHHHHHHHHhcCchh
Confidence 89999987 455 58999999999999999999999999899998887555 5688999999999999999999999
Q ss_pred CCCHHHHHH
Q 015234 81 RPLMTDILR 89 (411)
Q Consensus 81 RPSa~eIL~ 89 (411)
|.+.++|..
T Consensus 261 RAslEeI~s 269 (864)
T KOG4717|consen 261 RASLEEIVS 269 (864)
T ss_pred hccHHHHhc
Confidence 999999875
No 291
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=98.93 E-value=1.7e-09 Score=105.96 Aligned_cols=87 Identities=20% Similarity=0.407 Sum_probs=63.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR----------------------------- 51 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~----------------------------- 51 (411)
+|||++.+. .++.++|+||||+++|+|++|..||...+.......+..
T Consensus 165 ~aPE~~~~~---~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (308)
T cd06615 165 MSPERLQGT---HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFE 241 (308)
T ss_pred cChhHhcCC---CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHH
Confidence 589988754 678899999999999999999999976543332221100
Q ss_pred ------cCCCCCCC-CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 52 ------RQEIPPIP-SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 52 ------~~~~p~iP-~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....+..| ..++.++.+++.+||..+|++||++.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 242 LLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred HHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01111122 1367889999999999999999999999874
No 292
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.93 E-value=1.9e-09 Score=100.80 Aligned_cols=84 Identities=25% Similarity=0.402 Sum_probs=69.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
++||.+... ..+.++|+||||+++|++++|..||...+.......+.. ..+.+|...+..+.+++.+||..||++
T Consensus 160 ~~Pe~~~~~---~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~ 234 (250)
T cd05123 160 LAPEVLLGK---GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTK 234 (250)
T ss_pred cChHHhCCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhh
Confidence 578888754 567899999999999999999999988877666666643 346677788999999999999999999
Q ss_pred CCCH---HHHHH
Q 015234 81 RPLM---TDILR 89 (411)
Q Consensus 81 RPSa---~eIL~ 89 (411)
||++ ++++.
T Consensus 235 R~~~~~~~~l~~ 246 (250)
T cd05123 235 RLGSGGAEEIKA 246 (250)
T ss_pred CCCcccHHHHHh
Confidence 9999 55543
No 293
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.93 E-value=2.2e-09 Score=103.39 Aligned_cols=107 Identities=21% Similarity=0.356 Sum_probs=75.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~----s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++... ...++.++|+||||+++|+|++|..||... ....+...+. ...++.|..+++.+.+++.+||+.
T Consensus 173 ~aPE~~~~~-~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ll~~~l~~ 249 (290)
T cd05613 173 MAPDIVRGG-DGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL--KSEPPYPQEMSALAKDIIQRLLMK 249 (290)
T ss_pred CChhhccCC-CCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh--ccCCCCCccCCHHHHHHHHHHhcC
Confidence 589988643 224678999999999999999999999743 2233333332 223456777899999999999999
Q ss_pred ccCCCC-----CHHHHHHHHHhhhccccCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRP-----LMTDILRVFKSSQNSVHSDGGWTGHGSRILPDKS 116 (411)
Q Consensus 77 DP~~RP-----Sa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~ 116 (411)
||.+|| ++.+++. ++++....|..+......+++
T Consensus 250 ~p~~R~~~~~~~~~~l~~------~~~~~~~~~~~~~~~~~~~~~ 288 (290)
T cd05613 250 DPKKRLGCGPSDADEIKK------HPFFQKINWDDLAAKKVPAPF 288 (290)
T ss_pred CHHHhcCCCCCCHHHHHc------CcccccCCHHHHhhccCCCCC
Confidence 999997 5555543 356666667665444444443
No 294
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=98.92 E-value=2.6e-09 Score=101.66 Aligned_cols=90 Identities=21% Similarity=0.359 Sum_probs=67.4
Q ss_pred CCCccccCCC----CCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCC----CCCCCCCCCHHHHHHHH
Q 015234 1 MAPEQWQPEV----RGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQE----IPPIPSGLPPAVENVLL 71 (411)
Q Consensus 1 MAPEvl~~~~----~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~----~p~iP~~~p~~l~~LI~ 71 (411)
||||++.... ...++.++|+||+||++|||++ |..||......+....+..... .+..+..++..+.+++.
T Consensus 169 ~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (269)
T cd05042 169 LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQ 248 (269)
T ss_pred cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHH
Confidence 5788875311 1256789999999999999999 8889988776666655443322 12234467888999999
Q ss_pred HhhhhccCCCCCHHHHHHHH
Q 015234 72 GCFEYDLRSRPLMTDILRVF 91 (411)
Q Consensus 72 ~CL~~DP~~RPSa~eIL~~L 91 (411)
.|| .||++||+++++++.|
T Consensus 249 ~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 249 FCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred HHh-cCcccccCHHHHHHHh
Confidence 999 5999999999998775
No 295
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.92 E-value=2.1e-09 Score=102.68 Aligned_cols=88 Identities=26% Similarity=0.320 Sum_probs=65.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
+|||++... ..++.++|+||+|+++|||++|.++|.+.+.......+...-..+
T Consensus 167 ~aPE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (286)
T cd07832 167 RAPELLYGA--RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKP 244 (286)
T ss_pred cCceeeecc--ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCc
Confidence 689988653 256889999999999999999988887766554443332211000
Q ss_pred ----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+..+..+.+++.+||..+|.+||++++++.+
T Consensus 245 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred chHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0112456889999999999999999999999865
No 296
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.92 E-value=1e-09 Score=108.94 Aligned_cols=156 Identities=19% Similarity=0.311 Sum_probs=106.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCC-------CCHHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-------RSVDEIY-DAVVRRQEIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~-------~s~~ei~-~~Il~~~~~p~iP~~~p~~l~~LI~~ 72 (411)
+|||++.+. .|+..+|+|++|++++||+.|+.||+- ++.++.+ +-|++.. ..+|..++-.+..+++.
T Consensus 418 iapeilrge---eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq--iriprslsvkas~vlkg 492 (593)
T KOG0695|consen 418 IAPEILRGE---EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ--IRIPRSLSVKASHVLKG 492 (593)
T ss_pred cchhhhccc---ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc--ccccceeehhhHHHHHH
Confidence 589999987 899999999999999999999999973 2334443 4444333 56788999999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHhh-hccccCCCCCCCCCCCCCCCCCCCC-CCcccccccccccCCeeeecCCCCCCCCCCC
Q 015234 73 CFEYDLRSRPLMTDILRVFKSS-QNSVHSDGGWTGHGSRILPDKSSSG-YTEWFLSKEDLKVDDVVRSRKPPNSFKPENM 150 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le~l-~~~~~~~~~w~~l~~r~~~pp~sp~-~s~~~lskd~lq~gd~vrsrk~~~s~~Penm 150 (411)
.|.+||..|....--. -|..+ .+++|...+|+.+......||+.|. ...+-+. ++.. .+........|+
T Consensus 493 flnkdp~erlgc~~~~-g~~dik~h~ffr~idwd~leqk~v~ppf~p~i~~d~~l~--~fd~----qft~e~~qltpd-- 563 (593)
T KOG0695|consen 493 FLNKDPKERLGCRPQT-GFSDIKSHAFFRSIDWDLLEQKQVLPPFQPQITDDYGLD--NFDT----QFTSEPVQLTPD-- 563 (593)
T ss_pred hhcCCcHHhcCCCccc-chhhhhcchhhhhCCHHHHhhcccCCCCCCccccccCcc--cccc----ccccCCcccCCC--
Confidence 9999999997432100 22222 3468889999999999999999998 4444333 2210 111111222344
Q ss_pred CCCCceEEeeeeCCCCceEEEEE
Q 015234 151 DVPEGRVVGVEHNTEGESFVLVR 173 (411)
Q Consensus 151 ~~p~GtI~gid~~~d~Dg~llVr 173 (411)
....|..++ .++-+||..+.
T Consensus 564 --d~d~i~rid-qsefegfeyin 583 (593)
T KOG0695|consen 564 --DEDAIKRID-QSEFEGFEYIN 583 (593)
T ss_pred --CHHHHHhcc-hhhcCcceecc
Confidence 233445555 45567887764
No 297
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.92 E-value=1.7e-09 Score=107.26 Aligned_cols=88 Identities=19% Similarity=0.220 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---------------------CCC-
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---------------------PPI- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~---------------------p~i- 58 (411)
||||++.+. ..++.++||||+||++|+|++|..||...+..+.+..+...... +..
T Consensus 182 ~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
T cd07878 182 RAPEIMLNW--MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMP 259 (343)
T ss_pred cCchHhcCC--ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhcccccc
Confidence 689998752 26788999999999999999999999876554443333211000 001
Q ss_pred -------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 -------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 -------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....++.+.+|+.+||+.||.+|||+.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 260 QQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred chhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12356678899999999999999999999864
No 298
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=98.92 E-value=1.6e-09 Score=105.69 Aligned_cols=89 Identities=18% Similarity=0.243 Sum_probs=62.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------------- 55 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------------- 55 (411)
+|||++... ...|+.++|+||+||++|||++|..||...+..............
T Consensus 175 ~aPE~~~~~-~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (314)
T cd08216 175 LSPEVLQQN-LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHP 253 (314)
T ss_pred cCHHHhcCC-CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccccc
Confidence 589988753 125788999999999999999999999876543322111111000
Q ss_pred -------CCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 -------PPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 -------p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+..++.++.+++..||+.||++||++.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 254 NNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred chhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00111234678899999999999999999999874
No 299
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.91 E-value=1.8e-09 Score=103.60 Aligned_cols=87 Identities=18% Similarity=0.374 Sum_probs=65.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHH-HHHH-hcCCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY-DAVV-RRQEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~-~~Il-~~~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .++.++|+||+|+++|+|++|..||......... ..+. ........+..+++.+.+++.+||+.+|
T Consensus 173 ~aPE~~~~~---~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p 249 (267)
T PHA03390 173 FSPEKIKGH---NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNI 249 (267)
T ss_pred cChhhhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccCh
Confidence 689999765 6888999999999999999999999865332211 1111 1122234556789999999999999999
Q ss_pred CCCCC-HHHHHHH
Q 015234 79 RSRPL-MTDILRV 90 (411)
Q Consensus 79 ~~RPS-a~eIL~~ 90 (411)
.+|++ +++++++
T Consensus 250 ~~R~~~~~~~l~h 262 (267)
T PHA03390 250 NYRLTNYNEIIKH 262 (267)
T ss_pred hhCCchHHHHhcC
Confidence 99996 6888753
No 300
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.91 E-value=3.4e-09 Score=105.59 Aligned_cols=88 Identities=19% Similarity=0.270 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-----------------------CCCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-----------------------EIPP 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-----------------------~~p~ 57 (411)
+|||++... ..++.++|+|||||++|+|++|..||...+..+....+.... ..+.
T Consensus 185 ~aPE~~~~~--~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (342)
T cd07854 185 RSPRLLLSP--NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPR 262 (342)
T ss_pred cCHHHHhCc--cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccC
Confidence 589987542 257889999999999999999999998766544433332110 0000
Q ss_pred -----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....++.++.+|+.+||+.||.+||++++++.+
T Consensus 263 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 263 RPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred CCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 123467889999999999999999999999764
No 301
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1.1e-09 Score=106.33 Aligned_cols=90 Identities=18% Similarity=0.257 Sum_probs=76.1
Q ss_pred CCCccccCCCCC---CCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEVRG---PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~~g---~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~ 75 (411)
+|||.+.+..+. .|+..+|+|++|+++|.++.|.+||......-.+..|...++....| .+++...++|+++||+
T Consensus 189 LAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLq 268 (411)
T KOG0599|consen 189 LAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQ 268 (411)
T ss_pred cChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHe
Confidence 589998865333 68999999999999999999999999876666677777766665444 5689999999999999
Q ss_pred hccCCCCCHHHHHHH
Q 015234 76 YDLRSRPLMTDILRV 90 (411)
Q Consensus 76 ~DP~~RPSa~eIL~~ 90 (411)
.||.+|.|+++.++|
T Consensus 269 Vdp~~Ritake~LaH 283 (411)
T KOG0599|consen 269 VDPTKRITAKEALAH 283 (411)
T ss_pred eCchhcccHHHHhcC
Confidence 999999999999874
No 302
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.91 E-value=1.9e-09 Score=103.81 Aligned_cols=88 Identities=22% Similarity=0.197 Sum_probs=65.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------C-----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------P----- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------~----- 57 (411)
+|||++.+. ..++.++|+||||+++|+|++|..||.+.+..+...++...-..+ .
T Consensus 178 ~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (295)
T cd07837 178 RAPEVLLGS--THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQD 255 (295)
T ss_pred CChHHhhCC--CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchh
Confidence 589988642 257889999999999999999999998876555444332210000 0
Q ss_pred ---CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ---iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+.++..+.+++.+||..||.+||++.+++.+
T Consensus 256 ~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 256 LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 013477889999999999999999999998764
No 303
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.91 E-value=2.9e-09 Score=101.79 Aligned_cols=88 Identities=20% Similarity=0.330 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------------------CCC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ--------------------EIP---- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~--------------------~~p---- 56 (411)
||||++... ..++.++|+||+|+++|+|++|.+||...+..+....+.... ..+
T Consensus 168 ~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (288)
T cd07833 168 RAPELLVGD--TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQ 245 (288)
T ss_pred cCCchhcCC--CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCC
Confidence 689998753 257889999999999999999999998765443332221100 000
Q ss_pred ------CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ------~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+..++.++.+++.+||..+|++||++++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 246 PESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred cHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 1123358889999999999999999999998753
No 304
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=98.91 E-value=8.7e-10 Score=107.39 Aligned_cols=87 Identities=22% Similarity=0.319 Sum_probs=67.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||.+.+. .++.++|+||+|+++|++++|..||...+.......+..... ....+..++..+.+++.+||+.+|+
T Consensus 182 ~aPE~~~~~---~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 258 (297)
T cd06656 182 MAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVD 258 (297)
T ss_pred cCHHHHcCC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence 578888764 678899999999999999999999987655433332222111 1224566888999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++++
T Consensus 259 ~Rps~~~il~~ 269 (297)
T cd06656 259 RRGSAKELLQH 269 (297)
T ss_pred hCcCHHHHhcC
Confidence 99999999874
No 305
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.91 E-value=2.2e-09 Score=102.25 Aligned_cols=88 Identities=22% Similarity=0.264 Sum_probs=65.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
+|||.+... ..++.++|+||+|+++|+|++|+.||...+..+....+......+
T Consensus 165 ~~PE~~~~~--~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05118 165 RAPELLLGD--KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAG 242 (283)
T ss_pred cCcHHHhcC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccc
Confidence 589988643 257889999999999999999999998776554443332211000
Q ss_pred ----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...+.++.++.+++.+||+.||.+||++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 243 MPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred cCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0123467889999999999999999999999764
No 306
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.90 E-value=2.8e-09 Score=101.72 Aligned_cols=85 Identities=18% Similarity=0.280 Sum_probs=77.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
++||+..+. .++..+|+|++|+++||++.|.+||...+..++++.|.... ..+|..++.++.++|.+|+..+|.+
T Consensus 189 l~pEmv~~~---~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~--~~~p~~is~~a~dlI~~ll~~~p~~ 263 (281)
T KOG0580|consen 189 LPPEMVEGR---GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD--LKFPSTISGGAADLISRLLVKNPIE 263 (281)
T ss_pred CCHhhcCCC---CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc--ccCCcccChhHHHHHHHHhccCccc
Confidence 589999986 78999999999999999999999999999889999886443 5678999999999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
|.+..+++.+
T Consensus 264 r~~l~~v~~h 273 (281)
T KOG0580|consen 264 RLALTEVMDH 273 (281)
T ss_pred cccHHHHhhh
Confidence 9999999875
No 307
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.90 E-value=2.7e-09 Score=102.95 Aligned_cols=88 Identities=23% Similarity=0.239 Sum_probs=65.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------------------- 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-------------------------- 54 (411)
||||++.+. ..++.++|+||+|+++|+|++|.+||...+......++...-.
T Consensus 173 ~aPE~~~~~--~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (293)
T cd07843 173 RAPELLLGA--KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPY 250 (293)
T ss_pred cCchhhcCC--ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccc
Confidence 689988753 2467899999999999999999999988766554443321100
Q ss_pred ---CCCCCCC-CCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 ---IPPIPSG-LPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 ---~p~iP~~-~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
...++.. +++.+.+++.+||+.+|++||++.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 251 NQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0112222 57889999999999999999999999764
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.90 E-value=1.8e-09 Score=101.99 Aligned_cols=84 Identities=24% Similarity=0.270 Sum_probs=67.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH---HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---DEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~---~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||++... .++.++|+||+|+++|+|++|..||...+. ....... . ...+..|..++..+.+++.+||+.|
T Consensus 166 ~~PE~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~l~~~ 240 (258)
T cd05578 166 MAPEVLCRQ---GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ-E-TADVLYPATWSTEAIDAINKLLERD 240 (258)
T ss_pred cCHHHHccc---CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHh-c-cccccCcccCcHHHHHHHHHHccCC
Confidence 589988765 578899999999999999999999998763 3333332 2 1345667788999999999999999
Q ss_pred cCCCCCH--HHHHH
Q 015234 78 LRSRPLM--TDILR 89 (411)
Q Consensus 78 P~~RPSa--~eIL~ 89 (411)
|.+||++ .+++.
T Consensus 241 p~~R~~~~~~~l~~ 254 (258)
T cd05578 241 PQKRLGDNLKDLKN 254 (258)
T ss_pred hhHcCCccHHHHhc
Confidence 9999999 66553
No 309
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.90 E-value=2.2e-09 Score=107.31 Aligned_cols=87 Identities=18% Similarity=0.235 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--------------------CC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI--------------------PP--- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~--------------------p~--- 57 (411)
+|||++.+. .++.++|+||+||++|+|++|..||...+.......+...-.. +.
T Consensus 184 ~aPE~~~~~---~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (353)
T cd07850 184 RAPEVILGM---GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAG 260 (353)
T ss_pred cCHHHHhCC---CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCC
Confidence 589998765 7889999999999999999999999876544333332210000 00
Q ss_pred -----------C-------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----------I-------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----------i-------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. +...++.+.+++.+||+.||++||++.+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 261 YSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred cchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 11245678899999999999999999999874
No 310
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.90 E-value=1.7e-09 Score=105.06 Aligned_cols=87 Identities=22% Similarity=0.318 Sum_probs=66.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... .++.++|+||||+++|++++|..||...+.......+.... .....+..++..+.+++.+||..+|.
T Consensus 182 ~~PE~~~~~---~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~ 258 (293)
T cd06647 182 MAPEVVTRK---AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVE 258 (293)
T ss_pred cCchhhccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChh
Confidence 579988754 67889999999999999999999998776544333222111 11123445778899999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+||++.+++.+
T Consensus 259 ~Rp~~~~il~h 269 (293)
T cd06647 259 KRGSAKELLQH 269 (293)
T ss_pred hCcCHHHHhcC
Confidence 99999999864
No 311
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=98.89 E-value=1.7e-09 Score=120.27 Aligned_cols=110 Identities=21% Similarity=0.323 Sum_probs=89.8
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~ 76 (411)
++||++.... .+.|+..+|+||+||++|||+.|..||+..+..+++.+|+.......+| ..+|+++++||.+.++
T Consensus 243 ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~- 321 (1317)
T KOG0612|consen 243 ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC- 321 (1317)
T ss_pred cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-
Confidence 4788886321 2579999999999999999999999999999999999998776667777 5699999999998877
Q ss_pred ccCCCCC---HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 77 DLRSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 77 DP~~RPS---a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
+|+.|.. ++++.. ++||.+.+|..+ |...||+.|.
T Consensus 322 ~~e~RLgrngiedik~------HpFF~g~~W~~i--R~~~pP~vPe 359 (1317)
T KOG0612|consen 322 DREVRLGRNGIEDIKN------HPFFEGIDWDNI--RESVPPVVPE 359 (1317)
T ss_pred ChhhhcccccHHHHHh------CccccCCChhhh--hhcCCCCCCc
Confidence 5888987 666654 489999999654 4456777777
No 312
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.89 E-value=3.6e-09 Score=103.46 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=60.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHhcCCCC---------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV---------DEIYDAVVRRQEIP--------------- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~---------~ei~~~Il~~~~~p--------------- 56 (411)
||||++.+. ..|+.++|+||+||++|||++|.+||..... ...+..+......+
T Consensus 182 ~aPE~~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (317)
T cd07868 182 RAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHS 259 (317)
T ss_pred cCCHHHcCC--CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchh
Confidence 689998753 2578899999999999999999999974321 11111111000000
Q ss_pred ---------------------CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ---------------------~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......+..+.+|+.+||+.||.+|||+++++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 260 TLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred hhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0001234568899999999999999999999864
No 313
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=98.89 E-value=3.2e-09 Score=102.49 Aligned_cols=86 Identities=24% Similarity=0.390 Sum_probs=64.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhcCCCCCCC------CCCCHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-----SVDEIYDAVVRRQEIPPIP------SGLPPAVENV 69 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-----s~~ei~~~Il~~~~~p~iP------~~~p~~l~~L 69 (411)
+|||.+... .++.++|+||+||++|+|++|..||... ...+....+.. ...+..+ ...++.+.++
T Consensus 170 ~~pE~~~~~---~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 245 (287)
T cd06621 170 MAPERIQGK---PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN-MPNPELKDEPGNGIKWSEEFKDF 245 (287)
T ss_pred cCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc-CCchhhccCCCCCCchHHHHHHH
Confidence 589988754 6888999999999999999999999865 22334443322 1112221 1245789999
Q ss_pred HHHhhhhccCCCCCHHHHHHH
Q 015234 70 LLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 70 I~~CL~~DP~~RPSa~eIL~~ 90 (411)
+.+||..+|.+||++.+++.+
T Consensus 246 i~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 246 IKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHHHcCCCcccCCCHHHHHhC
Confidence 999999999999999999874
No 314
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.88 E-value=3e-09 Score=100.97 Aligned_cols=85 Identities=21% Similarity=0.428 Sum_probs=69.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
+|||++... .++.++|+||+|++++++++|..||...+....+..+.. ....+|..+++.+.+++.+||+.+|.+
T Consensus 189 ~~Pe~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 189 VSPELLNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred cCHHHhCCC---CCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhh
Confidence 578877654 578899999999999999999999998776666655542 334567788999999999999999999
Q ss_pred CCCH----HHHHHH
Q 015234 81 RPLM----TDILRV 90 (411)
Q Consensus 81 RPSa----~eIL~~ 90 (411)
||++ ++++++
T Consensus 264 R~~~~~~~~~ll~~ 277 (280)
T cd05581 264 RLGVNEGYDELKAH 277 (280)
T ss_pred CCCcccCHHHHhcC
Confidence 9999 777654
No 315
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.87 E-value=3.7e-09 Score=102.22 Aligned_cols=88 Identities=24% Similarity=0.299 Sum_probs=64.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC---------------------CCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------------------PIP 59 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p---------------------~iP 59 (411)
+|||++.+. ..++.++|+||+||++|||++|.+||.+.+.......+......+ ..+
T Consensus 193 ~aPE~~~~~--~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (311)
T cd07866 193 RPPELLLGE--RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP 270 (311)
T ss_pred CChHHhhCC--CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCC
Confidence 589987643 257889999999999999999999998876655444332211000 000
Q ss_pred -------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 -------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 -------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+.+.+.+++.+||+.||.+||++.+++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 271 RTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred ccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1244678899999999999999999988754
No 316
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.87 E-value=4.5e-09 Score=103.30 Aligned_cols=88 Identities=22% Similarity=0.305 Sum_probs=67.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----------------------- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~----------------------- 57 (411)
+|||++.+. ..++.++|+||+|+++|+|++|.+||.+.+..+.+..+......+.
T Consensus 173 ~aPE~~~~~--~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (330)
T cd07834 173 RAPELLLSS--SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKP 250 (330)
T ss_pred CCceeeecc--cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCC
Confidence 589998764 2578899999999999999999999998776665554433211110
Q ss_pred ------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+.++..+.+++.+||+.+|.+||++.+++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 251 KKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred cchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 123367889999999999999999999999874
No 317
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.87 E-value=3.4e-09 Score=107.95 Aligned_cols=87 Identities=28% Similarity=0.442 Sum_probs=62.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhc-------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRR------------------------- 52 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~---ei~~~Il~~------------------------- 52 (411)
||||++... .|+.++|+||+||++|||++|..||.+.... ..+..+...
T Consensus 254 ~aPE~~~~~---~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (392)
T PHA03207 254 NSPELLALD---PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAI 330 (392)
T ss_pred cCHhHhcCC---CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcc
Confidence 689999865 7889999999999999999999999764321 111111110
Q ss_pred CCCCC--CC-----CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 53 QEIPP--IP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 53 ~~~p~--iP-----~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+++ .| ..++.++.++|.+||+.||.+||++.+++.+
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 331 VLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00011 11 2356778899999999999999999999875
No 318
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=98.86 E-value=1.8e-09 Score=117.30 Aligned_cols=92 Identities=14% Similarity=0.188 Sum_probs=75.2
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCCC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 81 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~R 81 (411)
|||++.-...-+++.|+|||+|||+||-|+....||...-... |+..++..+..+.++..+++||..||+.||++|
T Consensus 223 sPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~R 298 (738)
T KOG1989|consen 223 SPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDER 298 (738)
T ss_pred ChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----EEeccccCCCCccHHHHHHHHHHHHhccCcccC
Confidence 7999875433388999999999999999999999998763332 444555555556799999999999999999999
Q ss_pred CCHHHHHHHHHhhhcc
Q 015234 82 PLMTDILRVFKSSQNS 97 (411)
Q Consensus 82 PSa~eIL~~Le~l~~~ 97 (411)
|++.+++..+..+...
T Consensus 299 PnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 299 PNIYQVLEEIFELANK 314 (738)
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999988777654
No 319
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.86 E-value=2.9e-09 Score=106.03 Aligned_cols=88 Identities=23% Similarity=0.293 Sum_probs=65.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---------------------CCCC-
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------------------IPPI- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~---------------------~p~i- 58 (411)
||||++.+. ..++.++|+|||||++|||++|+.||.+.+....+..+..... .+..
T Consensus 181 ~aPE~~~~~--~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (342)
T cd07879 181 RAPEVILNW--MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYP 258 (342)
T ss_pred cChhhhcCc--cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcc
Confidence 689988652 2578899999999999999999999998765444433221100 0000
Q ss_pred -------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 -------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 -------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+..+..+.+++.+||+.||.+||++.+++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 259 RKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred cchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 12466788999999999999999999999864
No 320
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.86 E-value=2.4e-09 Score=110.26 Aligned_cols=91 Identities=20% Similarity=0.227 Sum_probs=75.5
Q ss_pred CCCccccCCC-CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEV-RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~-~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||.+.... ....+.+.||||+|++||.|+.|+.||.+....+++.+|.......+..+.+.+.+++||.++|++||.
T Consensus 282 ~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~ 361 (576)
T KOG0585|consen 282 FAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPE 361 (576)
T ss_pred cchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChh
Confidence 7999998732 113457899999999999999999999999999999999865544333345789999999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+|.+..+|..|.
T Consensus 362 ~Ri~l~~ik~Hp 373 (576)
T KOG0585|consen 362 QRITLPDIKLHP 373 (576)
T ss_pred heeehhhheecc
Confidence 999999887653
No 321
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.86 E-value=6.8e-09 Score=99.18 Aligned_cols=88 Identities=19% Similarity=0.271 Sum_probs=63.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-----------------C------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-----------------P------ 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p-----------------~------ 57 (411)
||||++... ..++.++|+||||+++|||++|.+||...+..+....+......+ .
T Consensus 165 ~aPE~~~~~--~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd07830 165 RAPEILLRS--TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAP 242 (283)
T ss_pred cCceeeecC--cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccccc
Confidence 689988643 257889999999999999999999998765544443322110000 0
Q ss_pred -----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+..+.+++.+||+.+|++||++++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 243 TSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 011236789999999999999999999998754
No 322
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.86 E-value=5.4e-09 Score=95.78 Aligned_cols=85 Identities=22% Similarity=0.388 Sum_probs=65.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcCCCCCCCCC--CCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIPSG--LPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~-~s~~ei~~~Il~~~~~p~iP~~--~p~~l~~LI~~CL~~D 77 (411)
++||++... .++.++|+|++|+++|++++|..||.. .........+ ........+.. ++.++.+++.+||..+
T Consensus 153 ~~pE~~~~~---~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 228 (244)
T smart00220 153 MAPEVLLGK---GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKI-GKPKPPFPPPEWKISPEAKDLIRKLLVKD 228 (244)
T ss_pred CCHHHHccC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH-hccCCCCccccccCCHHHHHHHHHHccCC
Confidence 578888754 678899999999999999999999987 4444444443 22222222222 8889999999999999
Q ss_pred cCCCCCHHHHHH
Q 015234 78 LRSRPLMTDILR 89 (411)
Q Consensus 78 P~~RPSa~eIL~ 89 (411)
|++||++.++++
T Consensus 229 p~~Rp~~~~~~~ 240 (244)
T smart00220 229 PEKRLTAEEALQ 240 (244)
T ss_pred chhccCHHHHhh
Confidence 999999999876
No 323
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.86 E-value=4.4e-09 Score=103.90 Aligned_cols=88 Identities=19% Similarity=0.251 Sum_probs=66.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP----------------------- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~----------------------- 57 (411)
+|||++.+. ..++.++|+||+||++|||++|.+||...+..+.+..+......+.
T Consensus 200 ~aPE~~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (335)
T PTZ00024 200 RAPELLMGA--EKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKD 277 (335)
T ss_pred CCChhcccC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCccc
Confidence 589988753 2468899999999999999999999998776655544332110000
Q ss_pred ---CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ---iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+..+.+++.+||+.+|++||++++++.+
T Consensus 278 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 278 LKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 012457888999999999999999999999864
No 324
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.85 E-value=5e-09 Score=98.46 Aligned_cols=87 Identities=25% Similarity=0.462 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
+|||++... ...++.++|+||||+++||+++ |..||...+..+...... ... ..+......+.+++.+||..+|+
T Consensus 171 ~aPE~~~~~-~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~~p~ 246 (259)
T cd05037 171 IAPECIRNG-QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQH--RLPMPDCAELANLINQCWTYDPT 246 (259)
T ss_pred cChhhhcCC-CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCC--CCCCCCchHHHHHHHHHhccChh
Confidence 589998753 1257889999999999999999 688887765443333222 221 12222347899999999999999
Q ss_pred CCCCHHHHHHHH
Q 015234 80 SRPLMTDILRVF 91 (411)
Q Consensus 80 ~RPSa~eIL~~L 91 (411)
+||++.++++.|
T Consensus 247 ~Rpt~~~il~~l 258 (259)
T cd05037 247 KRPSFRAILRDL 258 (259)
T ss_pred hCCCHHHHHHhc
Confidence 999999998765
No 325
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.85 E-value=3.8e-09 Score=101.98 Aligned_cols=88 Identities=23% Similarity=0.213 Sum_probs=65.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-------------------CC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-------------------PP---- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-------------------p~---- 57 (411)
||||++.+. ..++.++|+||+|+++|+|++|.+||...+..+...++...... +.
T Consensus 170 ~~PE~~~~~--~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (294)
T PLN00009 170 RAPEILLGS--RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPK 247 (294)
T ss_pred cCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCC
Confidence 589988653 25788999999999999999999999877655544433211000 00
Q ss_pred ----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+..++.+.+++.+||+.+|.+||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 248 DLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred CHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 123467889999999999999999999999863
No 326
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=98.85 E-value=3.1e-09 Score=119.56 Aligned_cols=86 Identities=20% Similarity=0.344 Sum_probs=66.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP-SGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP-~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++... ...++.++|||||||++|||++|..||...+....+...+... +.+| ...+.++.+||..||+.+|.
T Consensus 208 mAPEvL~ge-~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~--p~lpi~~~S~eL~dLI~~~L~~dPe 284 (1021)
T PTZ00266 208 WSPELLLHE-TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG--PDLPIKGKSKELNILIKNLLNLSAK 284 (1021)
T ss_pred cCHHHHhcc-CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC--CCCCcCCCCHHHHHHHHHHhcCChh
Confidence 689998643 2257889999999999999999999998765433333332222 2222 45789999999999999999
Q ss_pred CCCCHHHHHH
Q 015234 80 SRPLMTDILR 89 (411)
Q Consensus 80 ~RPSa~eIL~ 89 (411)
+||++.+++.
T Consensus 285 eRPSa~QlL~ 294 (1021)
T PTZ00266 285 ERPSALQCLG 294 (1021)
T ss_pred HCcCHHHHhc
Confidence 9999999986
No 327
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.85 E-value=5.5e-09 Score=107.20 Aligned_cols=87 Identities=24% Similarity=0.337 Sum_probs=76.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p--~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... +|+..+|+||+|+++|.|++|.+||.+.+.......+....... +..+.++..+++++..++..||
T Consensus 205 ~APEvl~~~---~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp 281 (382)
T KOG0032|consen 205 VAPEVLGGR---PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDP 281 (382)
T ss_pred cCchhhcCC---CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCc
Confidence 699999865 89999999999999999999999999999888888887665433 3346689999999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+|+++.++++|
T Consensus 282 ~~R~ta~~~L~H 293 (382)
T KOG0032|consen 282 RKRLTAAQALQH 293 (382)
T ss_pred ccCCCHHHHhcC
Confidence 999999999875
No 328
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.85 E-value=4.7e-09 Score=99.98 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC---------------------C--
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP---------------------P-- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p---------------------~-- 57 (411)
||||.+.+. ..++.++|+||||+++|||++|..||...+.......+......+ .
T Consensus 168 ~~PE~~~~~--~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (287)
T cd07840 168 RPPELLLGA--TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYK 245 (287)
T ss_pred CCceeeEcc--ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccch
Confidence 689987643 257889999999999999999999998876655444433211000 0
Q ss_pred ------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+...++..+.+++.+||..+|.+||++.+++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 246 RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 011137889999999999999999999998764
No 329
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=98.85 E-value=3.9e-09 Score=100.95 Aligned_cols=88 Identities=20% Similarity=0.251 Sum_probs=65.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC----------------CC-------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI----------------PP------- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~----------------p~------- 57 (411)
|+||++.+. ..++.++|+||+|+++|+|++|..||.+.+..+....+...... ..
T Consensus 167 ~~PE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (284)
T cd07836 167 RAPDVLLGS--RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQ 244 (284)
T ss_pred cChHHhcCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChH
Confidence 589988653 25688999999999999999999999887655544433221100 00
Q ss_pred ----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+.+.++..+.+++.+||+.||.+||++.+++++
T Consensus 245 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 245 DLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred HHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 112457788999999999999999999998753
No 330
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=98.84 E-value=6.8e-09 Score=101.13 Aligned_cols=86 Identities=22% Similarity=0.312 Sum_probs=67.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p--~iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||++... .++.++|+||+|+++|+|++|..||...+..+....+. ..... .....++..+.+++.+||+.+|
T Consensus 183 ~~pE~~~~~---~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 183 MAPELISRL---PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR-DNLPPKLKNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred cCHHHhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hhCCcccCCcccCCHHHHHHHHHHHhCCc
Confidence 588988654 67889999999999999999999998876655544432 22211 2234578899999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999998864
No 331
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.84 E-value=5.7e-09 Score=100.86 Aligned_cols=88 Identities=18% Similarity=0.145 Sum_probs=64.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
+|||++... ..++.++|+||+||++|||++|++||...+..+.+..+......+
T Consensus 184 ~~PE~~~~~--~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T cd07864 184 RPPELLLGE--ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYR 261 (302)
T ss_pred cChHHhcCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccc
Confidence 579987643 246789999999999999999999998765544333322210000
Q ss_pred ----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....++..+.+++.+||+.+|++||++.+++.+
T Consensus 262 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 262 RRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0012468899999999999999999999998754
No 332
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.84 E-value=1.6e-08 Score=100.47 Aligned_cols=102 Identities=20% Similarity=0.309 Sum_probs=74.1
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC---CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP---SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP---~~~p~~l~~LI~~CL~ 75 (411)
||||++.... ...++.++|+||+||++|||++|..||...+..+.+..+........++ ..+++.+.+++.+|+.
T Consensus 170 ~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~ 249 (331)
T cd05597 170 ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLIC 249 (331)
T ss_pred cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHcc
Confidence 6899986321 1357889999999999999999999999888777777765433323333 3478999999999886
Q ss_pred hccC--CCCCHHHHHHHHHhhhccccCCCCCCCCC
Q 015234 76 YDLR--SRPLMTDILRVFKSSQNSVHSDGGWTGHG 108 (411)
Q Consensus 76 ~DP~--~RPSa~eIL~~Le~l~~~~~~~~~w~~l~ 108 (411)
.++. .|+++.+++.+ +++.+.+|....
T Consensus 250 ~~~~r~~r~~~~~~l~h------p~~~~~~~~~~~ 278 (331)
T cd05597 250 SPETRLGRNGLQDFKDH------PFFEGIDWDNIR 278 (331)
T ss_pred CcccccCCCCHHHHhcC------CCCCCCCHHHHh
Confidence 5333 36788888754 666666665544
No 333
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.83 E-value=4.7e-09 Score=104.04 Aligned_cols=88 Identities=17% Similarity=0.222 Sum_probs=63.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc------------------------CCCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR------------------------QEIP 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~------------------------~~~p 56 (411)
||||++.+. ..++.++|+||+||++|+|++|+.||.+.+.......+... ...+
T Consensus 176 ~aPE~~~~~--~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (336)
T cd07849 176 RAPEIMLNS--KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKP 253 (336)
T ss_pred cChHHhhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCC
Confidence 689987542 25788999999999999999999999876543322211100 0000
Q ss_pred C-----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 P-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ~-----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. ..+..++++.+++.+||+.+|.+||++.+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 254 KVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred cccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 012456789999999999999999999999875
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.83 E-value=5.9e-09 Score=103.24 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=64.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc------------------------CCCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR------------------------QEIP 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~------------------------~~~p 56 (411)
+|||++... ..++.++|+||+|+++|||++|+.||.+.+.......+... ....
T Consensus 178 ~~PE~~~~~--~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (334)
T cd07855 178 RAPELLLSL--PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ 255 (334)
T ss_pred cChHHhcCC--cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCC
Confidence 479987642 25788999999999999999999999876544332222110 0001
Q ss_pred CC-----CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 PI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ~i-----P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.. ....++++.+++.+||+.+|++||++.+++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 256 PVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred CCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11 13468899999999999999999999998874
No 335
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=98.83 E-value=5.7e-09 Score=113.05 Aligned_cols=92 Identities=26% Similarity=0.421 Sum_probs=80.3
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
|-|.+.. ..|+.++||||||+++||++| |..||.+....++...+ +.+.+++.|+.++.+++.+|.+||..|+..
T Consensus 868 ale~i~~---~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-e~geRLsqPpiCtiDVy~~mvkCwmid~~~ 943 (1177)
T KOG1025|consen 868 ALESIRI---RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-EKGERLSQPPICTIDVYMVMVKCWMIDADS 943 (1177)
T ss_pred HHHHhhc---cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-hccccCCCCCCccHHHHHHHHHHhccCccc
Confidence 3444543 489999999999999999999 99999999988887755 677888999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhhcc
Q 015234 81 RPLMTDILRVFKSSQNS 97 (411)
Q Consensus 81 RPSa~eIL~~Le~l~~~ 97 (411)
||+|+++...|.++...
T Consensus 944 rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 944 RPTFKELAEEFSRMARD 960 (1177)
T ss_pred CccHHHHHHHHHHHhcC
Confidence 99999999988777654
No 336
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.83 E-value=5.9e-09 Score=103.48 Aligned_cols=88 Identities=16% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc------------------------CC--
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR------------------------QE-- 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~------------------------~~-- 54 (411)
||||++... ..++.++|+|||||++|+|++|..||.+.+.......+... ..
T Consensus 175 ~aPE~~~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
T cd07858 175 RAPELLLNC--SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTP 252 (337)
T ss_pred cChHHHhcC--CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCccc
Confidence 689987642 25788999999999999999999999876543222211100 00
Q ss_pred CC---CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 IP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 ~p---~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+ ...+.+++++.+++.+||+.+|.+||++.+++++
T Consensus 253 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 253 RQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred ccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00 0124578889999999999999999999999875
No 337
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.82 E-value=9.2e-09 Score=101.85 Aligned_cols=88 Identities=17% Similarity=0.181 Sum_probs=64.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC--------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------------------- 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-------------------------- 54 (411)
||||++... ..++.++|+||||+++|+|++|+.||.+....+....+.....
T Consensus 179 ~aPE~~~~~--~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (337)
T cd07852 179 RAPEILLGS--TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRP 256 (337)
T ss_pred cCceeeecc--ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhccccc
Confidence 689987643 3578899999999999999999999987654433322211100
Q ss_pred CC---CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 IP---PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 ~p---~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.. .....++.++.+++.+||+.+|++||++.+++++
T Consensus 257 ~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 257 RKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred ccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00 1112368899999999999999999999999874
No 338
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.82 E-value=5.3e-09 Score=104.19 Aligned_cols=88 Identities=22% Similarity=0.236 Sum_probs=65.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
+|||.+.+. ..++.++|+||+|+++|++++|..||.+.+..+.+..+......+
T Consensus 182 ~aPE~~~~~--~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
T cd07851 182 RAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMP 259 (343)
T ss_pred cCHHHHhCC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccC
Confidence 578887642 257889999999999999999999998776655444432211100
Q ss_pred -----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 -----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 -----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......++.+.+++.+||..+|.+|||+.+++.+
T Consensus 260 ~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 260 KKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0012357889999999999999999999999764
No 339
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.82 E-value=2.5e-09 Score=104.28 Aligned_cols=88 Identities=20% Similarity=0.179 Sum_probs=59.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH---------HHHHHHHhc-CC-----------CC---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---------EIYDAVVRR-QE-----------IP--- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~---------ei~~~Il~~-~~-----------~p--- 56 (411)
||||++.+. ..++.++|+||+||++|||++|.+||...... .....+... +. .+
T Consensus 182 ~aPE~~~~~--~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (317)
T cd07867 182 RAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYP 259 (317)
T ss_pred cCcHHhcCC--CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccch
Confidence 689998753 25788999999999999999999999753210 000000000 00 00
Q ss_pred ---------------------CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 ---------------------PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ---------------------~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
......+..+.+|+.+||+.||.+|||+.|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 260 TLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred hhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0011234567889999999999999999999864
No 340
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.81 E-value=4.6e-09 Score=102.00 Aligned_cols=95 Identities=22% Similarity=0.255 Sum_probs=83.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
|+||.++.+....--.++|+|||.+++||+.|...||...++.++-.++.-++.++.+|+.++..+..|++-|+..||.+
T Consensus 353 mspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgk 432 (448)
T KOG0195|consen 353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGK 432 (448)
T ss_pred CCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCc
Confidence 78999986522222247999999999999999999999999999988887788899999999999999999999999999
Q ss_pred CCCHHHHHHHHHhhh
Q 015234 81 RPLMTDILRVFKSSQ 95 (411)
Q Consensus 81 RPSa~eIL~~Le~l~ 95 (411)
||.+..|+..|+++.
T Consensus 433 rpkfdmivpilekm~ 447 (448)
T KOG0195|consen 433 RPKFDMIVPILEKMI 447 (448)
T ss_pred CCCcceehhhHHHhc
Confidence 999999999888753
No 341
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.81 E-value=8.3e-09 Score=99.74 Aligned_cols=88 Identities=19% Similarity=0.208 Sum_probs=62.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCCC---------------CC-----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEIP---------------PI----- 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~--~~~~p---------------~i----- 58 (411)
||||++.+. ..++.++|+||||+++|||++|.+||.+.+.......+.. ....+ ..
T Consensus 190 ~aPE~~~~~--~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (310)
T cd07865 190 RPPELLLGE--RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQK 267 (310)
T ss_pred cCcHHhcCC--cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccc
Confidence 689988653 2467899999999999999999999987665433322211 00000 00
Q ss_pred --------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 --------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 --------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+...+..+.+++.+||..||.+||++.+++++
T Consensus 268 ~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 268 RKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred hhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 11135677899999999999999999998764
No 342
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.81 E-value=7.3e-09 Score=106.02 Aligned_cols=87 Identities=23% Similarity=0.389 Sum_probs=60.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHh----------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------VDEIYDAVVR---------------------- 51 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-------~~ei~~~Il~---------------------- 51 (411)
||||++... .|+.++|+||+||++|||++|..||.... ....+..+..
T Consensus 250 ~aPE~~~~~---~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~ 326 (391)
T PHA03212 250 NAPELLARD---PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYI 326 (391)
T ss_pred CChhhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHH
Confidence 689999865 78999999999999999999998875421 1111111110
Q ss_pred ----cCC-CC-CCC-----CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 52 ----RQE-IP-PIP-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 52 ----~~~-~p-~iP-----~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
... .+ ..+ ..++.++.+|+.+||+.||.+|||+.+++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 327 GLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000 00 001 1246688999999999999999999999864
No 343
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.80 E-value=3.6e-09 Score=111.76 Aligned_cols=85 Identities=21% Similarity=0.338 Sum_probs=71.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||+... .|+..+||||||++++||+|+..||..+ ++.+++.++.....+-.+..--.+++++||.+|+.. ..
T Consensus 211 MAPEmYEE----~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~ 285 (632)
T KOG0584|consen 211 MAPEMYEE----NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KS 285 (632)
T ss_pred cChHHHhh----hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-ch
Confidence 89999985 6999999999999999999999999976 677888888644332233344568999999999999 89
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
.|||+.|+|.+
T Consensus 286 ~R~sa~eLL~d 296 (632)
T KOG0584|consen 286 ERLSAKELLKD 296 (632)
T ss_pred hccCHHHHhhC
Confidence 99999999873
No 344
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.80 E-value=7.3e-09 Score=100.05 Aligned_cols=88 Identities=19% Similarity=0.212 Sum_probs=64.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---------------------CC--
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI---------------------PP-- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~---------------------p~-- 57 (411)
+|||++... ..++.++|+|||||++|||++|.+||.+.+..+.+.++...... +.
T Consensus 169 ~aPE~~~~~--~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (298)
T cd07841 169 RAPELLFGA--RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTP 246 (298)
T ss_pred eCHHHHhCC--CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcc
Confidence 578887542 35788999999999999999998888876655444443221000 00
Q ss_pred ---CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ---iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.....+..+.+++.+||..+|++||++.+++.+
T Consensus 247 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 247 LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 113356788999999999999999999999874
No 345
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=6.2e-09 Score=109.49 Aligned_cols=89 Identities=20% Similarity=0.305 Sum_probs=77.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPS-GLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~-~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++...-.|.|+-++||||+||++.|+...++|+.+++....++.|. .+..|.++. ..+..+.+|+..||++-|.
T Consensus 189 MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIA-QNesPtLqs~eWS~~F~~Fvd~CLqKipq 267 (948)
T KOG0577|consen 189 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDSCLQKIPQ 267 (948)
T ss_pred cchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHH-hcCCCCCCCchhHHHHHHHHHHHHhhCcc
Confidence 89999976556799999999999999999999999999999999998885 455565543 4788999999999999999
Q ss_pred CCCCHHHHHHH
Q 015234 80 SRPLMTDILRV 90 (411)
Q Consensus 80 ~RPSa~eIL~~ 90 (411)
+|||.++++++
T Consensus 268 eRptse~ll~H 278 (948)
T KOG0577|consen 268 ERPTSEELLKH 278 (948)
T ss_pred cCCcHHHHhhc
Confidence 99999998764
No 346
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.79 E-value=1.1e-08 Score=97.24 Aligned_cols=88 Identities=23% Similarity=0.279 Sum_probs=64.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-------------------CCC----
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-------------------IPP---- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-------------------~p~---- 57 (411)
+|||++... ..++.++|+||||+++||+++|.+||...+..+....+..... .+.
T Consensus 165 ~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (282)
T cd07829 165 RAPEILLGS--KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPK 242 (282)
T ss_pred CChHHhcCC--cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCcc
Confidence 589988643 2578899999999999999999999988765544433321000 000
Q ss_pred ----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+..+..+.+++.+||+.+|++||++.+++.+
T Consensus 243 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 243 DLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred chHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 012346789999999999999999999998764
No 347
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.79 E-value=4.3e-09 Score=118.86 Aligned_cols=93 Identities=28% Similarity=0.385 Sum_probs=64.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcC-----CCCCC------CCCCCH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-----VDEIYDAVVRRQ-----EIPPI------PSGLPP 64 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-----~~ei~~~Il~~~-----~~p~i------P~~~p~ 64 (411)
||||++... .|+.++|||||||++|||++|+.||.... ..+......... ..+.. +.....
T Consensus 845 ~aPE~~~~~---~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (968)
T PLN00113 845 VAPETRETK---DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIV 921 (968)
T ss_pred cCcccccCC---CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHH
Confidence 799999865 78999999999999999999999986421 111111110000 00111 111223
Q ss_pred HHHHHHHHhhhhccCCCCCHHHHHHHHHhhhc
Q 015234 65 AVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 96 (411)
Q Consensus 65 ~l~~LI~~CL~~DP~~RPSa~eIL~~Le~l~~ 96 (411)
++.+++.+||+.||++||+|.++++.|+.+..
T Consensus 922 ~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 922 EVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 56788899999999999999999999987655
No 348
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=1e-08 Score=102.50 Aligned_cols=87 Identities=22% Similarity=0.306 Sum_probs=66.8
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc------------------------CCCCC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR------------------------QEIPP 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~------------------------~~~p~ 57 (411)
|||++... ..|+.+.||||.|||+.||++|++-|.+.+..+.+..|+.- ...++
T Consensus 195 APElll~~--~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~ 272 (359)
T KOG0660|consen 195 APELLLNS--SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPK 272 (359)
T ss_pred CHHHHhcc--ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCC
Confidence 79988653 58999999999999999999999999986544333332211 11111
Q ss_pred C-----CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 I-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 i-----P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. -+..++.+.+|+.++|..||.+|+|++|.+++
T Consensus 273 ~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 273 QPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1 14688899999999999999999999999874
No 349
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.75 E-value=8.3e-09 Score=97.09 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=58.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++... .++.++|+||+|+++|||++|..|+...... + .......+|..+++.+++++.+||+.||++
T Consensus 149 ~aPE~~~~~---~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~ 219 (237)
T cd05576 149 CAPEVGGIS---EETEACDWWSLGAILFELLTGKTLVECHPSG-----I-NTHTTLNIPEWVSEEARSLLQQLLQFNPTE 219 (237)
T ss_pred cCCcccCCC---CCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c-ccccccCCcccCCHHHHHHHHHHccCCHHH
Confidence 689988654 6788999999999999999999887643211 1 111223456778999999999999999999
Q ss_pred CCCH
Q 015234 81 RPLM 84 (411)
Q Consensus 81 RPSa 84 (411)
|+++
T Consensus 220 R~~~ 223 (237)
T cd05576 220 RLGA 223 (237)
T ss_pred hcCC
Confidence 9986
No 350
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.75 E-value=2.4e-09 Score=100.48 Aligned_cols=87 Identities=23% Similarity=0.373 Sum_probs=63.3
Q ss_pred CCCcccc-CCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcCCC--CCCCCCCCHHHHHHHHHhh
Q 015234 1 MAPEQWQ-PEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD---EIYDAVVRRQEI--PPIPSGLPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~-~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~---ei~~~Il~~~~~--p~iP~~~p~~l~~LI~~CL 74 (411)
+|||++. .. .++.++|+||+|+++|+|++|..||...... ............ .......+..+.+++..||
T Consensus 165 ~aPE~~~~~~---~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l 241 (260)
T PF00069_consen 165 MAPEVLQQGK---KYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKML 241 (260)
T ss_dssp SCHHHHTTTS---SBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHS
T ss_pred cccccccccc---cccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHc
Confidence 5899987 33 6789999999999999999999999987322 222222211100 1111223489999999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
+.||++||++.+++++
T Consensus 242 ~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 242 SKDPEQRPSAEELLKH 257 (260)
T ss_dssp SSSGGGSTTHHHHHTS
T ss_pred cCChhHCcCHHHHhcC
Confidence 9999999999998754
No 351
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.74 E-value=9.2e-09 Score=104.23 Aligned_cols=86 Identities=22% Similarity=0.404 Sum_probs=72.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||+++.. .|+.|+|+||+|+++|+|++|+.||...+..+++..+...... +.++..++....+|+...++.++.
T Consensus 181 MAPEV~~~~---~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~ 257 (429)
T KOG0595|consen 181 MAPEVIMSQ---QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPK 257 (429)
T ss_pred cCHHHHHhc---cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCcc
Confidence 999999754 8999999999999999999999999999999998876544433 344556777888999999999999
Q ss_pred CCCCHHHHHH
Q 015234 80 SRPLMTDILR 89 (411)
Q Consensus 80 ~RPSa~eIL~ 89 (411)
+|.++.+...
T Consensus 258 ~~~~~~~~~~ 267 (429)
T KOG0595|consen 258 DRISFEDFFD 267 (429)
T ss_pred ccCchHHhhh
Confidence 9998876544
No 352
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.74 E-value=1.2e-08 Score=102.49 Aligned_cols=87 Identities=20% Similarity=0.262 Sum_probs=57.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCC-CCCCH----------HHHHHHHHhcCCC-CCCC---------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPR-CGRSV----------DEIYDAVVRRQEI-PPIP--------- 59 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf-~~~s~----------~ei~~~Il~~~~~-p~iP--------- 59 (411)
||||++... .|+.++|+|||||++|||+++..|+ ..... ..+...+...+.. ..++
T Consensus 223 ~aPE~~~~~---~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 299 (357)
T PHA03209 223 NAPEVLARD---KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVR 299 (357)
T ss_pred cCCeecCCC---CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHH
Confidence 689999865 7899999999999999999854444 32110 0111111000000 0011
Q ss_pred ---------------------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 ---------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 ---------------------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..++.++.+||.+||+.||.+|||+.+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 300 GFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 1345677789999999999999999999875
No 353
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.74 E-value=1.1e-08 Score=99.36 Aligned_cols=88 Identities=20% Similarity=0.220 Sum_probs=61.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHH---------HHHHHHh--------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---------IYDAVVR-------------------- 51 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~e---------i~~~Il~-------------------- 51 (411)
+|||++.+. ..++.++|+||||+++|+|++|.+||....... .+..++.
T Consensus 182 ~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (316)
T cd07842 182 RAPELLLGA--RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYD 259 (316)
T ss_pred cCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccch
Confidence 689987653 257889999999999999999999998643221 0001100
Q ss_pred ----cCCCCCCC-----------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 52 ----RQEIPPIP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 52 ----~~~~p~iP-----------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.......+ ...+..+.+++.+||+.||.+|||+.+++.+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 260 TLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred hhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00001111 1456788999999999999999999998754
No 354
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.74 E-value=1.8e-08 Score=100.05 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=63.4
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc------------------------CCCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR------------------------QEIP 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~------------------------~~~p 56 (411)
+|||++.+. ..++.++|+||+|+++|+|++|..||...........+... ....
T Consensus 172 ~aPE~~~~~--~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (328)
T cd07856 172 RAPEIMLTW--QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKRE 249 (328)
T ss_pred cCceeeecc--CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccC
Confidence 589987642 25788999999999999999999999876543222111100 0001
Q ss_pred CC-----CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 PI-----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ~i-----P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+. ...++..+.+++.+||+.+|++||++.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 250 PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11 13467899999999999999999999998764
No 355
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=98.74 E-value=1.8e-08 Score=96.91 Aligned_cols=88 Identities=24% Similarity=0.397 Sum_probs=60.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCC-------------------C---
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-VDEIYDAVVRRQEIP-------------------P--- 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-~~ei~~~Il~~~~~p-------------------~--- 57 (411)
+|||++.+. ..++.++|+||+|+++|+|++|..||.... ..+....+......+ .
T Consensus 170 ~aPE~~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (291)
T cd07844 170 RPPDVLLGS--TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYP 247 (291)
T ss_pred CCcHHhhcC--cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccC
Confidence 589988653 257889999999999999999999997654 222222111100000 0
Q ss_pred ------CCCCCC--HHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ------IPSGLP--PAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ------iP~~~p--~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
....++ .++.+++.+||+.+|++||++.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 248 PRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 001233 778899999999999999999998753
No 356
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.72 E-value=2.1e-08 Score=99.15 Aligned_cols=88 Identities=18% Similarity=0.249 Sum_probs=63.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--------------------------CC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--------------------------QE 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~--------------------------~~ 54 (411)
||||++.+. ..++.++|+||+|+++|+|++|.+||...+.......+... ..
T Consensus 176 ~aPE~~~~~--~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (332)
T cd07857 176 RAPEIMLSF--QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIP 253 (332)
T ss_pred cCcHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccC
Confidence 589987642 25788999999999999999999999876544333222110 00
Q ss_pred CCC---CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 IPP---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 ~p~---iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
... ....++..+.+++.+||+.||.+||++.+++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 254 KKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 112357889999999999999999999998763
No 357
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.71 E-value=2.4e-08 Score=102.89 Aligned_cols=87 Identities=18% Similarity=0.237 Sum_probs=70.9
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----------------C------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------------I------ 58 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~-----------------i------ 58 (411)
|||++... +-|+.+.|+|++||+++|+.+-++-|.+.+..+.+.+|+.--..|. +
T Consensus 177 APEvLLrs--~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~ 254 (538)
T KOG0661|consen 177 APEVLLRS--GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPS 254 (538)
T ss_pred chHHhhhc--cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCC
Confidence 89999864 6899999999999999999999999999887777776654211110 1
Q ss_pred -----CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 -----PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 -----P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
-+.+++++.++|.+|+..||.+|||+.+.+++
T Consensus 255 ~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 255 PLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 13478899999999999999999999999875
No 358
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.70 E-value=2.8e-08 Score=97.78 Aligned_cols=86 Identities=23% Similarity=0.354 Sum_probs=67.1
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--------------CC-----CCCCC---
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--------------QE-----IPPIP--- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~--------------~~-----~p~iP--- 59 (411)
|||.+.+. ..|+..+|||++||++.||++|.+-|.+.+..+.+..|... +. ..+-|
T Consensus 169 aPELLvGD--tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~ 246 (396)
T KOG0593|consen 169 APELLVGD--TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHP 246 (396)
T ss_pred Chhhhccc--CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCc
Confidence 79999874 38999999999999999999999999998766665554321 10 01111
Q ss_pred -------CCCCHHHHHHHHHhhhhccCCCCCHHHHHH
Q 015234 60 -------SGLPPAVENVLLGCFEYDLRSRPLMTDILR 89 (411)
Q Consensus 60 -------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~ 89 (411)
+.++.-+.+|+..||+.||++|++.++++.
T Consensus 247 epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 247 EPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 235556789999999999999999999986
No 359
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=98.70 E-value=2.6e-08 Score=96.01 Aligned_cols=88 Identities=25% Similarity=0.254 Sum_probs=60.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc-C---------------CCC-----CC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD-EIYDAVVRR-Q---------------EIP-----PI 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~-ei~~~Il~~-~---------------~~p-----~i 58 (411)
||||++.+. ..++.++|+||+|+++|+|++|..||...+.. +.+..+... + ..+ ..
T Consensus 170 ~aPE~~~~~--~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (291)
T cd07870 170 RPPDVLLGA--TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCK 247 (291)
T ss_pred cCCceeecC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccC
Confidence 589988643 24678999999999999999999999865432 222221110 0 000 00
Q ss_pred C---------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 59 P---------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 59 P---------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+ ...+..+.+++.+|++.||.+|||+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 248 PQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred CcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0 0135678899999999999999999998754
No 360
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=98.69 E-value=2.4e-08 Score=105.03 Aligned_cols=91 Identities=18% Similarity=0.348 Sum_probs=74.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh--CCCCCCCCCHHHHHHHHHh---cC---CCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT--GVQPRCGRSVDEIYDAVVR---RQ---EIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt--G~~Pf~~~s~~ei~~~Il~---~~---~~p~iP~~~p~~l~~LI~~ 72 (411)
||+|.+... ++++++|+|+||+++||+++ ...||...+.++....... .. ..+..|..|+..+.++|.+
T Consensus 706 mawEsillg---kFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~ 782 (807)
T KOG1094|consen 706 MAWESILLG---KFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLR 782 (807)
T ss_pred hhHHHHHhc---cccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHH
Confidence 789988754 89999999999999999866 8899999888777665432 11 1134578899999999999
Q ss_pred hhhhccCCCCCHHHHHHHHHhh
Q 015234 73 CFEYDLRSRPLMTDILRVFKSS 94 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~~Le~l 94 (411)
||..|..+||+++++..+|+..
T Consensus 783 Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 783 CWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HhchhhhcCCCHHHHHHHHHHh
Confidence 9999999999999999887643
No 361
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.68 E-value=2.9e-08 Score=99.04 Aligned_cols=87 Identities=24% Similarity=0.268 Sum_probs=64.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC------------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP------------------------ 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p------------------------ 56 (411)
||||++.+. ..++.++|+||+|+++|++++|..||...+.......+......+
T Consensus 182 ~aPE~~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (343)
T cd07880 182 RAPEVILNW--MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFR 259 (343)
T ss_pred cCHHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccC
Confidence 589988652 247889999999999999999999998776544433332211000
Q ss_pred -----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHH
Q 015234 57 -----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89 (411)
Q Consensus 57 -----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~ 89 (411)
.....+++.+.+++.+|++.||.+||++.+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 260 KKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred cchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 012357788999999999999999999999886
No 362
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.67 E-value=1.5e-08 Score=99.54 Aligned_cols=87 Identities=18% Similarity=0.266 Sum_probs=69.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVD----EIYDAVVRRQEIPPIP--SGLPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~----ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL 74 (411)
.|||++-.. +|+..+|+||+|+++|-|++|.+||+..... ....+|....+.++-| +.+++.++++|+.+|
T Consensus 230 vaPevlg~e---KydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LL 306 (400)
T KOG0604|consen 230 VAPEVLGPE---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLL 306 (400)
T ss_pred cCHHHhCch---hcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHh
Confidence 489999866 7999999999999999999999999976432 2334454444444333 458999999999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
..+|.+|.|+++++.+
T Consensus 307 kt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 307 KTEPTERLTIEEVMDH 322 (400)
T ss_pred cCCchhheeHHHhhcC
Confidence 9999999999999875
No 363
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.67 E-value=2.2e-08 Score=99.91 Aligned_cols=88 Identities=22% Similarity=0.243 Sum_probs=64.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC------------------------CC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE------------------------IP 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~------------------------~p 56 (411)
+|||.+.+. ..++.++|+||+||++|+|++|..||...+.......+..... .+
T Consensus 184 ~aPE~~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (345)
T cd07877 184 RAPEIMLNW--MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMP 261 (345)
T ss_pred cCHHHHhCc--cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccC
Confidence 589987652 2578899999999999999999999987655443332221100 00
Q ss_pred C-----CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 P-----IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ~-----iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. .....++.+.+++.+||+.||.+||++.+++.+
T Consensus 262 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 262 KMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 011357789999999999999999999999874
No 364
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.67 E-value=3.2e-08 Score=103.93 Aligned_cols=87 Identities=23% Similarity=0.318 Sum_probs=60.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC--------CHHHHHHHHHhcCC------------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR--------SVDEIYDAVVRRQE------------------ 54 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~--------s~~ei~~~Il~~~~------------------ 54 (411)
||||++.+. .++.++|||||||++|||++|..|+... ...++...+.....
T Consensus 329 ~APE~~~~~---~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~ 405 (461)
T PHA03211 329 NAPEVLAGD---PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYR 405 (461)
T ss_pred cCHHHHcCC---CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHH
Confidence 689999865 7899999999999999999977655432 11222222211110
Q ss_pred -------CCCC--C-----CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 55 -------IPPI--P-----SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 55 -------~p~i--P-----~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.+.. + ..++..+.+|+.+||+.||.+|||+.|++++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 406 HRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred hhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 0 1245678899999999999999999999875
No 365
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.66 E-value=2.3e-08 Score=111.25 Aligned_cols=83 Identities=18% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++.+. .|+.++|||||||++|||+++.+|+.... .....+.. ...++.+....+...+++..||+.+|.+
T Consensus 182 ~APE~~~~~---~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~ 255 (793)
T PLN00181 182 TSPEEDNGS---SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSC 255 (793)
T ss_pred EChhhhccC---CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhh
Confidence 799999865 78999999999999999999988875421 12222211 1112111123455678899999999999
Q ss_pred CCCHHHHHH
Q 015234 81 RPLMTDILR 89 (411)
Q Consensus 81 RPSa~eIL~ 89 (411)
||++.++++
T Consensus 256 Rps~~eil~ 264 (793)
T PLN00181 256 RPSMSELLQ 264 (793)
T ss_pred CcChHHHhh
Confidence 999999976
No 366
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.65 E-value=3.2e-09 Score=104.22 Aligned_cols=86 Identities=17% Similarity=0.239 Sum_probs=71.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP--PIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p--~iP~~~p~~l~~LI~~CL~~DP 78 (411)
||||++..- .|+.++||||+|++..||..|++||.+..+...+.-|- .+.+| ..|...+.++.++++.||-++|
T Consensus 196 MAPEVI~EI---GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP-T~PPPTF~KPE~WS~~F~DFi~~CLiK~P 271 (502)
T KOG0574|consen 196 MAPEVIEEI---GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP-TKPPPTFKKPEEWSSEFNDFIRSCLIKKP 271 (502)
T ss_pred ccHHHHHHh---ccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc-CCCCCCCCChHhhhhHHHHHHHHHhcCCH
Confidence 899999976 79999999999999999999999999887766555442 12222 2255678889999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
++|.|+.+++++
T Consensus 272 E~R~TA~~L~~H 283 (502)
T KOG0574|consen 272 EERKTALRLCEH 283 (502)
T ss_pred HHHHHHHHHhhh
Confidence 999999998875
No 367
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=98.65 E-value=3.3e-08 Score=110.76 Aligned_cols=93 Identities=19% Similarity=0.186 Sum_probs=68.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQ-EIPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~-~~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
||||++.+. .++.++|+||+||++|||++|..||................ ........+++.+.+++.+||+.||+
T Consensus 198 mAPE~l~g~---~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~ 274 (932)
T PRK13184 198 MAPERLLGV---PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPA 274 (932)
T ss_pred CCHHHhcCC---CCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChh
Confidence 789998865 78899999999999999999999998765544333211111 01111245788999999999999999
Q ss_pred CCC-CHHHHHHHHHhhhc
Q 015234 80 SRP-LMTDILRVFKSSQN 96 (411)
Q Consensus 80 ~RP-Sa~eIL~~Le~l~~ 96 (411)
+|+ ++++++..|+.+..
T Consensus 275 kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 275 ERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hCcCHHHHHHHHHHHHHh
Confidence 997 46667777776654
No 368
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.58 E-value=7.5e-08 Score=102.25 Aligned_cols=86 Identities=23% Similarity=0.362 Sum_probs=64.3
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------------------------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------------------ 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~------------------------ 57 (411)
|||++.+. +|+.+.|+||||||+.||++|.+-|.+.+..+.+..|..--..|+
T Consensus 356 APEVILGl---pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~ 432 (586)
T KOG0667|consen 356 APEVILGL---PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLC 432 (586)
T ss_pred cchhhccC---CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeee
Confidence 89999986 999999999999999999999988888766555544432100000
Q ss_pred --------------------------CCC-----------CCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 --------------------------IPS-----------GLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 --------------------------iP~-----------~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.|. .-...+.+++.+||..||..|+|..+.++|
T Consensus 433 ~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 433 VETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred eeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 110 011345799999999999999999998875
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.56 E-value=3.2e-08 Score=95.95 Aligned_cols=88 Identities=23% Similarity=0.332 Sum_probs=68.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCCCC--CC---CCCHHHHHHHHHhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV-DEIYDAVVRRQEIPPI--PS---GLPPAVENVLLGCF 74 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~-~ei~~~Il~~~~~p~i--P~---~~p~~l~~LI~~CL 74 (411)
||||.+... ...|+.++|+||||+++||+.||..||...+. .+.+..+.. +..|.+ +. .++..+..++..||
T Consensus 234 mAPERi~p~-~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~-gdpp~l~~~~~~~~~s~~~~~fintCl 311 (361)
T KOG1006|consen 234 MAPERIDPS-DKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI-GDPPILLFDKECVHYSFSMVRFINTCL 311 (361)
T ss_pred cChhccCCc-cCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc-CCCCeecCcccccccCHHHHHHHHHHh
Confidence 899999875 22599999999999999999999999998643 344444443 333322 22 37889999999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
.+|.++||...+++.+
T Consensus 312 ~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 312 IKDRSDRPKYDDLKKF 327 (361)
T ss_pred hcccccCcchhhhhcC
Confidence 9999999999998763
No 370
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.54 E-value=7.3e-08 Score=101.93 Aligned_cols=87 Identities=21% Similarity=0.313 Sum_probs=58.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCC-CCCCC--CHHHHHHHHHhcCC-----CC----------------
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQ-PRCGR--SVDEIYDAVVRRQE-----IP---------------- 56 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~-Pf~~~--s~~ei~~~Il~~~~-----~p---------------- 56 (411)
||||++.+. .|+.++|||||||++|||+++.. |+... .....+..+..... .+
T Consensus 335 ~aPE~~~~~---~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~ 411 (501)
T PHA03210 335 NSPEILAGD---GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID 411 (501)
T ss_pred CCchhhcCC---CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcc
Confidence 689999865 78999999999999999999765 44332 12111111111000 00
Q ss_pred CC---------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 57 PI---------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 57 ~i---------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.. ...++..+.+++.+||+.||.+||++.|++.+
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 412 HAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred cCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00 11255677888999999999999999999864
No 371
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.45 E-value=3.2e-07 Score=92.02 Aligned_cols=87 Identities=22% Similarity=0.301 Sum_probs=68.5
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC------------------CC------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI------------------PP------ 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~------------------p~------ 57 (411)
|||.+.+. ..|+.+.||||.||++.||+-|++-|.+.+..+.+..|.+--.. +.
T Consensus 193 aPELifga--~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~ 270 (364)
T KOG0658|consen 193 APELIFGA--TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPW 270 (364)
T ss_pred CHHHHcCc--cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccc
Confidence 89999875 47999999999999999999999999998765554433321100 10
Q ss_pred ---CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ---IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ---iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+....++++.+|+.++|+++|.+|.++.+++.+
T Consensus 271 ~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 271 HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 124578999999999999999999999998863
No 372
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.40 E-value=6e-07 Score=87.13 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=67.9
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------------------------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------------------ 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~------------------------ 57 (411)
|||.+.+. ..|+..+|+||.||++.||+-+.+-|.+.+..+.+..|.+.-..|.
T Consensus 169 APELLfGs--r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~ 246 (318)
T KOG0659|consen 169 APELLFGS--RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPL 246 (318)
T ss_pred ChHHhccc--hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcc
Confidence 79999875 4899999999999999999999888888776665555443211110
Q ss_pred --CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 --IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 --iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+-+.++.++.+|+.++|.+||.+|+++.|.+++
T Consensus 247 ~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 247 NNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 113467778999999999999999999998864
No 373
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.40 E-value=4.5e-07 Score=94.20 Aligned_cols=87 Identities=20% Similarity=0.330 Sum_probs=68.9
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--------CC--------------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------IP-------------- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~--------iP-------------- 59 (411)
|||.+.+. ..|+.++|+||.|||+.||+.|++.|.+.+..+.+.+|.+-...|. +|
T Consensus 287 pPELLLG~--t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~ 364 (560)
T KOG0600|consen 287 PPELLLGA--TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRR 364 (560)
T ss_pred ChHHhcCC--cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccch
Confidence 79999986 4799999999999999999999999999877666655543211110 11
Q ss_pred -----CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 -----SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 -----~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+++.+.+|+..+|..||++|.|+.+.+..
T Consensus 365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 365 LRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred HHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 2367788899999999999999999988753
No 374
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.39 E-value=7.1e-08 Score=97.19 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=61.1
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhc--------C--------CCCC-----
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDE---IYDAVVRR--------Q--------EIPP----- 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~e---i~~~Il~~--------~--------~~p~----- 57 (411)
|||++.+- +.+.++|+||+||||+|+.+|..-|...+..+ +.+.|+-. . .+..
T Consensus 277 APEViLgL---GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~ 353 (415)
T KOG0671|consen 277 APEVILGL---GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVS 353 (415)
T ss_pred Cchheecc---CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccc
Confidence 89999987 78999999999999999999999888654222 33333210 0 0000
Q ss_pred ------------CC--------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ------------IP--------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ------------iP--------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
.| ......+.+|+.++|.+||.+|+|+.|++.+
T Consensus 354 ~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 354 SKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred ccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcC
Confidence 00 0011346799999999999999999999864
No 375
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.35 E-value=7.6e-07 Score=88.81 Aligned_cols=87 Identities=25% Similarity=0.299 Sum_probs=67.7
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--------------------CC--
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--------------------IP-- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~--------------------iP-- 59 (411)
|||.+.+. ..|+++.|+||+|||+.||+++++-|.+.+..+.+++|...-..|. .|
T Consensus 245 aPELLLG~--~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn 322 (419)
T KOG0663|consen 245 APELLLGA--KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYN 322 (419)
T ss_pred CHHHhcCC--cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCch
Confidence 79999875 4799999999999999999999999999876666555543211110 01
Q ss_pred -------C-CCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 -------S-GLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 -------~-~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. .++....+|++.+|.+||.+|.|+++.+++
T Consensus 323 ~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 323 NLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred hhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1 145778899999999999999999998764
No 376
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.34 E-value=2.9e-07 Score=91.28 Aligned_cols=87 Identities=18% Similarity=0.347 Sum_probs=66.8
Q ss_pred CCCccccCCC--CCCCCccccchhHHHHHHHHHhCCCCCCCC-------C--------HHHHHHHHHhcCCCCCCC----
Q 015234 1 MAPEQWQPEV--RGPISFETDSWGFACSIIEMLTGVQPRCGR-------S--------VDEIYDAVVRRQEIPPIP---- 59 (411)
Q Consensus 1 MAPEvl~~~~--~g~ys~ksDIWSlGviLyELltG~~Pf~~~-------s--------~~ei~~~Il~~~~~p~iP---- 59 (411)
||||++.-.. ...|+.++|.||||+++|-|++|.+||.+. + ...++..|.+.. ..+|
T Consensus 253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGk--YeFPdkdW 330 (463)
T KOG0607|consen 253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK--YEFPDKDW 330 (463)
T ss_pred cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccC--CcCChhhh
Confidence 8999875321 126889999999999999999999999863 1 123445554444 3344
Q ss_pred CCCCHHHHHHHHHhhhhccCCCCCHHHHHH
Q 015234 60 SGLPPAVENVLLGCFEYDLRSRPLMTDILR 89 (411)
Q Consensus 60 ~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~ 89 (411)
..++.++++++..+|..|+.+|.++.++++
T Consensus 331 ahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 331 AHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 348999999999999999999999988776
No 377
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=98.33 E-value=1.3e-06 Score=89.05 Aligned_cols=85 Identities=18% Similarity=0.260 Sum_probs=70.8
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCCC
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 81 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~R 81 (411)
+||++++..|. +..+|.||||++||.|+.|..||++.+...+...|.+..++. +..|.++..||..+|..+|++|
T Consensus 220 SPEIvNG~PY~--GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE---P~~PSdA~gLIRwmLmVNP~RR 294 (668)
T KOG0611|consen 220 SPEIVNGTPYK--GPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE---PETPSDASGLIRWMLMVNPERR 294 (668)
T ss_pred CccccCCCCCC--CCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC---CCCCchHHHHHHHHHhcCcccc
Confidence 69999987322 578999999999999999999999999998888886555442 2345578899999999999999
Q ss_pred CCHHHHHHHH
Q 015234 82 PLMTDILRVF 91 (411)
Q Consensus 82 PSa~eIL~~L 91 (411)
.|+.+|..+.
T Consensus 295 ATieDiAsHW 304 (668)
T KOG0611|consen 295 ATIEDIASHW 304 (668)
T ss_pred hhHHHHhhhh
Confidence 9999998753
No 378
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.31 E-value=3.2e-07 Score=97.52 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=78.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC--CCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIP--SGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP--~~~p~~l~~LI~~CL~~DP 78 (411)
||||++... .|+..+|+||.|++||||+.|+.||...++.+...++......+.++ ..+++++.++|.++++ ++
T Consensus 838 iapevl~r~---g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sa 913 (1034)
T KOG0608|consen 838 IAPEVLART---GYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SA 913 (1034)
T ss_pred cChHHhccc---CccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-Ch
Confidence 699999865 79999999999999999999999999988877766654433333343 4689999999987554 47
Q ss_pred CCCCC---HHHHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 79 RSRPL---MTDILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 79 ~~RPS---a~eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
+.|.. ++++. .+++|.+++|..+. ....+..|.
T Consensus 914 d~RLGkng~d~vK------aHpfFkgIDfsslR--kq~ApYIP~ 949 (1034)
T KOG0608|consen 914 DSRLGKNGADQVK------AHPFFKGIDFSSLR--KQRAPYIPR 949 (1034)
T ss_pred hhhhcccchhhhh------cCccccccchHhhh--hccCCcCcc
Confidence 78874 33333 45789999998833 333344444
No 379
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.28 E-value=1.5e-06 Score=86.84 Aligned_cols=87 Identities=26% Similarity=0.318 Sum_probs=67.3
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC----------------CCC------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP----------------PIP------ 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p----------------~iP------ 59 (411)
|||++.+. ..|+...||||+||+++||+++++-|.+.+..+.+.+|.+.-..| .++
T Consensus 188 aPEvLlGs--~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 188 APEVLLGS--TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred CHHHhcCC--CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 79999875 369999999999999999999999999987776666554422111 111
Q ss_pred ------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 ------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 ------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+...+...+++.+||+++|.+|.|+..++.+
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1122477899999999999999999988765
No 380
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.26 E-value=3.3e-07 Score=96.89 Aligned_cols=86 Identities=21% Similarity=0.305 Sum_probs=74.3
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
.|||++.+.. .-+..+|+||+|+++|.|+.|.+||++.+..++...++..++ .+|..++.++.++|.++|..+|.+
T Consensus 221 AaPEl~~g~~--y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~--rIp~~ms~dce~lLrk~lvl~Psk 296 (596)
T KOG0586|consen 221 AAPELFNGKK--YDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY--RIPFYMSCDCEDLLRKFLVLNPSK 296 (596)
T ss_pred cChHhhcCcc--cCCcceehhhhhhhheeeeecccccCCcccccccchheeeee--cccceeechhHHHHHHhhccCccc
Confidence 3899999873 235789999999999999999999999988888887776554 466678889999999999999999
Q ss_pred CCCHHHHHHH
Q 015234 81 RPLMTDILRV 90 (411)
Q Consensus 81 RPSa~eIL~~ 90 (411)
|+++++++.+
T Consensus 297 r~~~dqim~~ 306 (596)
T KOG0586|consen 297 RGPCDQIMKD 306 (596)
T ss_pred cCCHHHhhhh
Confidence 9999999875
No 381
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.21 E-value=1.9e-06 Score=87.89 Aligned_cols=92 Identities=20% Similarity=0.414 Sum_probs=62.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHHhcCC-----CCCCC-CCCC--HH-
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS------VDEIYDAVVRRQE-----IPPIP-SGLP--PA- 65 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s------~~ei~~~Il~~~~-----~p~iP-~~~p--~~- 65 (411)
+|||++.. +..+.++||||||+++.|+++|+.+.+... ..+.....+.... .+.+. ...+ ..
T Consensus 245 ~~PEy~~~---g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~ 321 (361)
T KOG1187|consen 245 LAPEYAST---GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEV 321 (361)
T ss_pred CChhhhcc---CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHH
Confidence 68999975 378999999999999999999998877432 1121112222211 11222 2233 23
Q ss_pred --HHHHHHHhhhhccCCCCCHHHHHHHHHhhh
Q 015234 66 --VENVLLGCFEYDLRSRPLMTDILRVFKSSQ 95 (411)
Q Consensus 66 --l~~LI~~CL~~DP~~RPSa~eIL~~Le~l~ 95 (411)
+..+..+|++.+|.+||+|.++++.|+.+.
T Consensus 322 ~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 322 KKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 445667999999999999999988875433
No 382
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.19 E-value=2.5e-06 Score=96.23 Aligned_cols=84 Identities=21% Similarity=0.295 Sum_probs=60.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVDEIYDAVVRRQEIPPIP----SGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~-~s~~ei~~~Il~~~~~p~iP----~~~p~~l~~LI~~CL~ 75 (411)
+|||++......+|+.|+|+||+|++++||+. ||.- +....++..+ +.+. .+.| ...-+.-..+|..+++
T Consensus 782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~L-R~g~-iP~~~~f~~~~~~~e~slI~~Ll~ 856 (1351)
T KOG1035|consen 782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNL-RKGS-IPEPADFFDPEHPEEASLIRWLLS 856 (1351)
T ss_pred ecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhc-ccCC-CCCCcccccccchHHHHHHHHHhc
Confidence 69999987633379999999999999999984 5543 3444555554 2222 2222 2223455789999999
Q ss_pred hccCCCCCHHHHHH
Q 015234 76 YDLRSRPLMTDILR 89 (411)
Q Consensus 76 ~DP~~RPSa~eIL~ 89 (411)
.||.+|||+.|+|.
T Consensus 857 hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 857 HDPSKRPTATELLN 870 (1351)
T ss_pred CCCccCCCHHHHhh
Confidence 99999999999986
No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.12 E-value=3.8e-06 Score=90.56 Aligned_cols=76 Identities=12% Similarity=-0.018 Sum_probs=47.0
Q ss_pred CCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC---------CCCC----------CCCCCHHHHHHHHHhh
Q 015234 14 ISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE---------IPPI----------PSGLPPAVENVLLGCF 74 (411)
Q Consensus 14 ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~---------~p~i----------P~~~p~~l~~LI~~CL 74 (411)
++.++||||+||++|||+++..++... .......+..... .... .........+|+.+||
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 445679999999999999876665432 1111111110000 0000 0112234568999999
Q ss_pred hhccCCCCCHHHHHHH
Q 015234 75 EYDLRSRPLMTDILRV 90 (411)
Q Consensus 75 ~~DP~~RPSa~eIL~~ 90 (411)
+.||++|||+.++++|
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999864
No 384
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=98.09 E-value=1.3e-06 Score=95.79 Aligned_cols=89 Identities=22% Similarity=0.408 Sum_probs=72.7
Q ss_pred CCCccccCCCCC--CCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP--IPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g--~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~--iP~~~p~~l~~LI~~CL~~ 76 (411)
||||++.+.... .|+..+|+||||++..||..|.+|+.++.+...+..|-+.. +|. .|...+.++.++|..||.+
T Consensus 190 MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP-PPkLkrp~kWs~~FndFIs~cL~K 268 (953)
T KOG0587|consen 190 MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-PPKLKRPKKWSKKFNDFISTCLVK 268 (953)
T ss_pred ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC-CccccchhhHHHHHHHHHHHHHhh
Confidence 899999875322 57789999999999999999999999999888887764322 221 2556778889999999999
Q ss_pred ccCCCCCHHHHHHH
Q 015234 77 DLRSRPLMTDILRV 90 (411)
Q Consensus 77 DP~~RPSa~eIL~~ 90 (411)
|-.+||++.+++++
T Consensus 269 d~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 269 DYEQRPSTEELLKH 282 (953)
T ss_pred ccccCcchhhhccC
Confidence 99999999988763
No 385
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.07 E-value=1.3e-06 Score=91.32 Aligned_cols=86 Identities=23% Similarity=0.400 Sum_probs=63.7
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------------------------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------------------ 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~------------------------ 57 (411)
|||++.+. +|++..|+||.||+|||+.||+.-|.+.+..+++...+......+
T Consensus 603 aPEIiLG~---~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e 679 (752)
T KOG0670|consen 603 APEIILGL---PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIE 679 (752)
T ss_pred CcceeecC---cccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEe
Confidence 89999987 899999999999999999999999998766555443322111110
Q ss_pred ----------------CC-----------CCCC-------HHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 ----------------IP-----------SGLP-------PAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 ----------------iP-----------~~~p-------~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
-| ..++ ..+.+|+..||..||.+|.+..+.|.|
T Consensus 680 ~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 680 VDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred ccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 01 0011 236788999999999999999988764
No 386
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.04 E-value=5e-06 Score=92.90 Aligned_cols=107 Identities=18% Similarity=0.278 Sum_probs=82.7
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEI-PPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~-p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
.|||++... .|+..+|+|++|+++||++.|..||.+.++++++..++..... +.-...+++++++++..+|+.+|.
T Consensus 225 iaPeVilrq---gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~ 301 (1205)
T KOG0606|consen 225 IAPEVILRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPL 301 (1205)
T ss_pred cChhhhhhh---ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChH
Confidence 478988865 7999999999999999999999999999999999887654322 222345789999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCC
Q 015234 80 SRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILP 113 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~ 113 (411)
.|.-.... ++-..+.+|...+|..+++.+.+
T Consensus 302 ~Rlgt~ga---~evk~h~ff~~LDw~~llRqkae 332 (1205)
T KOG0606|consen 302 CRLGTGGA---LEVKQHGFFQLLDWKSLLRQKAE 332 (1205)
T ss_pred hhcccchh---hhhhhccceeecccchhhhhhcc
Confidence 99843322 22235567788888876665543
No 387
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=98.04 E-value=3.4e-06 Score=89.79 Aligned_cols=106 Identities=21% Similarity=0.295 Sum_probs=86.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRS 80 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~ 80 (411)
||||++. .+...+|+||||++++||++|..||.. ++...|+. ..+..|..++..+.+++..++..+|.+
T Consensus 160 mApEI~~-----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~n 228 (612)
T KOG0603|consen 160 RAPEIIN-----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILK--AELEMPRELSAEARSLFRQLFKRNPEN 228 (612)
T ss_pred hhhHhhh-----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhh--hccCCchhhhHHHHHHHHHHHhhCHHH
Confidence 7999987 467899999999999999999999987 55566653 236788899999999999999999999
Q ss_pred CCCHH-HHHHHHHhhhccccCCCCCCCCCCCCCCCCCCCC
Q 015234 81 RPLMT-DILRVFKSSQNSVHSDGGWTGHGSRILPDKSSSG 119 (411)
Q Consensus 81 RPSa~-eIL~~Le~l~~~~~~~~~w~~l~~r~~~pp~sp~ 119 (411)
|.-.. +.+.. ...+.++...+|..+..+...++++|.
T Consensus 229 rLg~~~~~~~e--ik~h~f~~~i~~~~l~~r~~~~~fkp~ 266 (612)
T KOG0603|consen 229 RLGAGPDGVDE--IKQHEFFQSIDWNELEARSRPPPFKPG 266 (612)
T ss_pred HhccCcchhHH--HhccchheeeeHhhHhhcCCCCCCCCc
Confidence 98542 22222 225678889999999999988888877
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.00 E-value=5.2e-06 Score=86.27 Aligned_cols=86 Identities=21% Similarity=0.228 Sum_probs=58.6
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC------HHHHHHHHH-----------hcCCC---------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS------VDEIYDAVV-----------RRQEI--------- 55 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s------~~ei~~~Il-----------~~~~~--------- 55 (411)
|||++.+. .|++.+||||++|+++||.||..-|...+ .++-+..|+ ..+..
T Consensus 419 apEVllGs---gY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G 495 (590)
T KOG1290|consen 419 APEVLLGS---GYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRG 495 (590)
T ss_pred CcceeecC---CCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhcccc
Confidence 79999986 89999999999999999999988776321 111111111 01000
Q ss_pred -------CC-------------CCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 56 -------PP-------------IPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 56 -------p~-------------iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+. ++..-..++.+|+.-+|+.+|.+|||+.+.+++
T Consensus 496 ~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~h 550 (590)
T KOG1290|consen 496 ELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKH 550 (590)
T ss_pred ceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcC
Confidence 00 111123446688999999999999999998764
No 389
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=97.90 E-value=2.1e-05 Score=78.27 Aligned_cols=86 Identities=20% Similarity=0.266 Sum_probs=62.4
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------------------------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP------------------------ 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~------------------------ 57 (411)
|||++.+. .|...+||||.||++.||+.|..-|.+.+..+.+.++...-..|.
T Consensus 185 apevil~~---~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~ 261 (369)
T KOG0665|consen 185 APEVILGM---GYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI 261 (369)
T ss_pred Cchheecc---CCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence 79999876 588999999999999999999988887654443333322111110
Q ss_pred -----CC-----------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 -----IP-----------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 -----iP-----------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+| +.-+.-+++++.++|..+|++|.++.++|+|
T Consensus 262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 11 1122346799999999999999999999865
No 390
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=97.85 E-value=3.6e-05 Score=81.16 Aligned_cols=96 Identities=25% Similarity=0.317 Sum_probs=68.8
Q ss_pred CCCccccCCCCCC----CCccccchhHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhcCCCCCCCC-----CCCHHHH
Q 015234 1 MAPEQWQPEVRGP----ISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQEIPPIPS-----GLPPAVE 67 (411)
Q Consensus 1 MAPEvl~~~~~g~----ys~ksDIWSlGviLyELltG~~Pf~~~----s~~ei~~~Il~~~~~p~iP~-----~~p~~l~ 67 (411)
.|||.+....... .+.+.|+||||++++|+++...||... .+.++...+......+..|. ..++++.
T Consensus 118 ~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~ 197 (484)
T KOG1023|consen 118 TAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELL 197 (484)
T ss_pred cCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHH
Confidence 4788887642222 466799999999999999999999863 34456666543133222221 3555788
Q ss_pred HHHHHhhhhccCCCCCHHHHHHHHHhhhc
Q 015234 68 NVLLGCFEYDLRSRPLMTDILRVFKSSQN 96 (411)
Q Consensus 68 ~LI~~CL~~DP~~RPSa~eIL~~Le~l~~ 96 (411)
.++..||..+|.+||++.++...++.+..
T Consensus 198 ~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 198 LLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99999999999999999998776655444
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.82 E-value=3.4e-06 Score=92.07 Aligned_cols=85 Identities=19% Similarity=0.234 Sum_probs=61.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCC-CCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIPP-IPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p~-iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||++... .-..++||+|+||++|..++ |..||...... -..|+...+... +-+....++.+||.+|+.++|
T Consensus 681 ~APE~L~~~---~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP 755 (903)
T KOG1027|consen 681 QAPEQLRED---RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDP 755 (903)
T ss_pred cCHHHHhcc---ccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhcCccceeeeccCchHHHHHHHHHhcCCCc
Confidence 699999975 44669999999999999888 59999764322 223443333221 111111289999999999999
Q ss_pred CCCCCHHHHHHH
Q 015234 79 RSRPLMTDILRV 90 (411)
Q Consensus 79 ~~RPSa~eIL~~ 90 (411)
..||++.+++.|
T Consensus 756 ~~RPsa~~VL~H 767 (903)
T KOG1027|consen 756 QLRPSATDVLNH 767 (903)
T ss_pred ccCCCHHHHhCC
Confidence 999999999864
No 392
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=97.80 E-value=2.8e-05 Score=80.25 Aligned_cols=89 Identities=17% Similarity=0.277 Sum_probs=64.1
Q ss_pred CCCccccC-CCCCCCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHH--HHhcC-CCCCCCCCCCHHHHHHHHHhhh
Q 015234 1 MAPEQWQP-EVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDA--VVRRQ-EIPPIPSGLPPAVENVLLGCFE 75 (411)
Q Consensus 1 MAPEvl~~-~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~--Il~~~-~~p~iP~~~p~~l~~LI~~CL~ 75 (411)
++||++.- +...+++.++|+||.|+|+|.++.|+.||... +..++++. |+... ..++..+.++.+++++|.+||+
T Consensus 647 LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLa 726 (775)
T KOG1151|consen 647 LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLA 726 (775)
T ss_pred cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHH
Confidence 57888753 22336889999999999999999999999865 33444432 22211 1233345689999999999999
Q ss_pred hccCCCCCHHHHHH
Q 015234 76 YDLRSRPLMTDILR 89 (411)
Q Consensus 76 ~DP~~RPSa~eIL~ 89 (411)
+.-++|....++..
T Consensus 727 YRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 727 YRKEDRIDVQQLAC 740 (775)
T ss_pred hhhhhhhhHHHHcc
Confidence 99999987666543
No 393
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.79 E-value=1.9e-05 Score=81.42 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=68.3
Q ss_pred CCCccccCCCCC-CCC--ccccchhHHHHHHHHHh----------CCCCCCCC-----CHHHHHHHHHhcCCCCCCCCCC
Q 015234 1 MAPEQWQPEVRG-PIS--FETDSWGFACSIIEMLT----------GVQPRCGR-----SVDEIYDAVVRRQEIPPIPSGL 62 (411)
Q Consensus 1 MAPEvl~~~~~g-~ys--~ksDIWSlGviLyELlt----------G~~Pf~~~-----s~~ei~~~Il~~~~~p~iP~~~ 62 (411)
||||++...... .+. ..+||||||.++||+.. .++||++. +.+++..-++-++.+|.+|...
T Consensus 387 MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW 466 (513)
T KOG2052|consen 387 MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW 466 (513)
T ss_pred cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccc
Confidence 899999764211 111 36999999999999876 26788874 3445555555566677666432
Q ss_pred -----CHHHHHHHHHhhhhccCCCCCHHHHHHHHHhhhc
Q 015234 63 -----PPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQN 96 (411)
Q Consensus 63 -----p~~l~~LI~~CL~~DP~~RPSa~eIL~~Le~l~~ 96 (411)
-..+..+|+.||..+|..|.|+-.|.+.|.++.+
T Consensus 467 ~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 467 KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 1345678999999999999999888887776653
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.76 E-value=5e-05 Score=80.91 Aligned_cols=74 Identities=11% Similarity=-0.045 Sum_probs=50.3
Q ss_pred cccchhHHHHHHHHHhCCC-CCCCCCHHH-----------HHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcc---CCC
Q 015234 17 ETDSWGFACSIIEMLTGVQ-PRCGRSVDE-----------IYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDL---RSR 81 (411)
Q Consensus 17 ksDIWSlGviLyELltG~~-Pf~~~s~~e-----------i~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP---~~R 81 (411)
+.|+||+||++|+|+++.. ||....... ....+.............++..++|+.++|..+| .+|
T Consensus 412 ~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~R 491 (507)
T PLN03224 412 LFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGR 491 (507)
T ss_pred ccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccC
Confidence 4799999999999999875 775421110 0111111122223345578899999999999766 689
Q ss_pred CCHHHHHHH
Q 015234 82 PLMTDILRV 90 (411)
Q Consensus 82 PSa~eIL~~ 90 (411)
+|+.++++|
T Consensus 492 lSa~eaL~H 500 (507)
T PLN03224 492 LSVGQALSH 500 (507)
T ss_pred CCHHHHhCC
Confidence 999999865
No 395
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.71 E-value=3.8e-05 Score=79.66 Aligned_cols=95 Identities=18% Similarity=0.281 Sum_probs=69.7
Q ss_pred CCCccccCCCCCCCC-----ccccchhHHHHHHHHHhCC------------CCCCC-----CCHHHHHHHHHhcCCCCCC
Q 015234 1 MAPEQWQPEVRGPIS-----FETDSWGFACSIIEMLTGV------------QPRCG-----RSVDEIYDAVVRRQEIPPI 58 (411)
Q Consensus 1 MAPEvl~~~~~g~ys-----~ksDIWSlGviLyELltG~------------~Pf~~-----~s~~ei~~~Il~~~~~p~i 58 (411)
||||++.+.. .+. ...||||+|.++|||++.- .||.. .+..++...+++++.+|.+
T Consensus 385 MAPEvLEgai--nl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~ 462 (534)
T KOG3653|consen 385 MAPEVLEGAI--NLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKI 462 (534)
T ss_pred cCHHHHhhhc--ccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCC
Confidence 8999998641 122 3689999999999999842 23431 2455666777888888887
Q ss_pred CCC-----CCHHHHHHHHHhhhhccCCCCCHHHHHHHHHhhhcc
Q 015234 59 PSG-----LPPAVENVLLGCFEYDLRSRPLMTDILRVFKSSQNS 97 (411)
Q Consensus 59 P~~-----~p~~l~~LI~~CL~~DP~~RPSa~eIL~~Le~l~~~ 97 (411)
|.. -..-+++.+..||..|++.|.|+.=+.+.+..+.+.
T Consensus 463 p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 463 PDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred hhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 754 334578899999999999999988777776655543
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=97.70 E-value=3.9e-05 Score=72.55 Aligned_cols=52 Identities=29% Similarity=0.403 Sum_probs=43.2
Q ss_pred CCCccccCCCCC-CCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhc
Q 015234 1 MAPEQWQPEVRG-PISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVRR 52 (411)
Q Consensus 1 MAPEvl~~~~~g-~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~Il~~ 52 (411)
||||.+...... .|+.++||||||+++.||.+++.||... ++.+.+..+++.
T Consensus 215 maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 215 MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred CChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 899998754322 7999999999999999999999999985 677777777643
No 397
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=97.60 E-value=9.3e-05 Score=73.67 Aligned_cols=87 Identities=23% Similarity=0.302 Sum_probs=59.4
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-------H--HHHHHHHHhcCCCCC---------CC----
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-------V--DEIYDAVVRRQEIPP---------IP---- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-------~--~ei~~~Il~~~~~p~---------iP---- 59 (411)
|||.+.+. ..|+.+.|+|+.|||+.||++-.+-|.+.. + .+.+.+|.+--..|. +|
T Consensus 207 APELLLGa--~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~ 284 (438)
T KOG0666|consen 207 APELLLGA--RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQT 284 (438)
T ss_pred ChHHhccc--ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHH
Confidence 89999975 489999999999999999999877776521 1 111222211100010 01
Q ss_pred ----------------------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 ----------------------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 ----------------------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..-++...+|+.++|++||.+|.|+++.+++
T Consensus 285 ~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 285 LLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 1123447799999999999999999988765
No 398
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.57 E-value=9.5e-05 Score=75.69 Aligned_cols=88 Identities=20% Similarity=0.349 Sum_probs=65.9
Q ss_pred CCCccccCCCCCC---CC-ccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGP---IS-FETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~---ys-~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
||||+.... .|+ .+ .++|.|+.|.+.||++....||+..-...+-...+.+..-|.+|+.+++.+++++..+|+.
T Consensus 418 mAPEi~ta~-PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 418 MAPEIATAV-PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred cchhhhhcC-CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcC
Confidence 899998753 232 22 3899999999999999999999974322221122334555788999999999999999999
Q ss_pred ccCCCCCHHHHHH
Q 015234 77 DLRSRPLMTDILR 89 (411)
Q Consensus 77 DP~~RPSa~eIL~ 89 (411)
||++|++..-...
T Consensus 497 ~pskRvsp~iAAN 509 (598)
T KOG4158|consen 497 DPSKRVSPNIAAN 509 (598)
T ss_pred CccccCCccHHHh
Confidence 9999998654333
No 399
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.56 E-value=0.00018 Score=69.93 Aligned_cols=87 Identities=18% Similarity=0.216 Sum_probs=63.6
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--cCCC------------------CCCC--
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVR--RQEI------------------PPIP-- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~--~~~~------------------p~iP-- 59 (411)
+||.+.+. ..|+.+.|+|.-||++.||+++.+-+.+.+..+.+..|.. .... +++|
T Consensus 196 ppEllLG~--r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~ 273 (376)
T KOG0669|consen 196 PPELLLGD--REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKG 273 (376)
T ss_pred CHHHhhcc--cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcc
Confidence 68888874 5799999999999999999999988887665544433211 1111 1111
Q ss_pred -----------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 -----------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 -----------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
-.-.+++.+|+..++..||.+|+.+.+++.+
T Consensus 274 ~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 274 QKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred hhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1123467899999999999999999999875
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.40 E-value=0.00012 Score=78.81 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=71.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPI---PSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~i---P~~~p~~l~~LI~~CL~~D 77 (411)
||||+..-...+.|+..+|+|++|+...|+-.-++|-....+.+.+......+..|+. +...++.+.+|++.|+.++
T Consensus 179 mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altkn 258 (829)
T KOG0576|consen 179 MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKN 258 (829)
T ss_pred cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCC
Confidence 8999987665678999999999999999998888888877777766655444444433 3347788999999999999
Q ss_pred cCCCCCHHHHHH
Q 015234 78 LRSRPLMTDILR 89 (411)
Q Consensus 78 P~~RPSa~eIL~ 89 (411)
|.+||+++.++.
T Consensus 259 pKkRptaeklL~ 270 (829)
T KOG0576|consen 259 PKKRPTAEKLLQ 270 (829)
T ss_pred CccCCChhhhee
Confidence 999999987764
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.37 E-value=0.00021 Score=70.16 Aligned_cols=87 Identities=17% Similarity=0.191 Sum_probs=61.0
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------------------HhcCCCC-C
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV-----------------------VRRQEIP-P 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~I-----------------------l~~~~~p-~ 57 (411)
|||++++. ..|+.+.||||.||++.|++..+.-|...++.+.++.| ++...++ .
T Consensus 225 APEiLMGa--RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps 302 (449)
T KOG0664|consen 225 APELLMGA--RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPD 302 (449)
T ss_pred cHHHhhcc--hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCC
Confidence 79999985 58999999999999999999988888776554433322 1111111 1
Q ss_pred C--------CCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 I--------PSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 i--------P~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
. +..-..+...++..++..||++|.+.++.+.+
T Consensus 303 ~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 303 TQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred ccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 1 12233456677788889999999988877764
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=97.31 E-value=0.00028 Score=67.84 Aligned_cols=87 Identities=16% Similarity=0.276 Sum_probs=59.7
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHh-----------cCCC----CC--------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR-SVDEIYDAVVR-----------RQEI----PP-------- 57 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~-s~~ei~~~Il~-----------~~~~----p~-------- 57 (411)
-||.+.. +..|+..-|+|||||++..|+..+-||... +..+.+-+|.. .++. |.
T Consensus 200 GPELLVd--y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~ 277 (338)
T KOG0668|consen 200 GPELLVD--YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRH 277 (338)
T ss_pred Cchheee--chhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcc
Confidence 3777765 357899999999999999999998887642 22211111100 0000 00
Q ss_pred --------CC----CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 58 --------IP----SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 58 --------iP----~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
++ .-.++++.+|+.++|.+|..+|+|+.|.+.+
T Consensus 278 ~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 278 SRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred ccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 01 1256899999999999999999999998864
No 403
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=97.20 E-value=4.6e-05 Score=80.11 Aligned_cols=84 Identities=20% Similarity=0.284 Sum_probs=67.1
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRR--QEIPPIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~--~~~p~iP~~~p~~l~~LI~~CL~~DP 78 (411)
+|||+++.+ .|+..-|+||.|+++|--++|..||... +++...|... .+++..+..+++++.+||+.+|+..-
T Consensus 733 LaPEVLrnk---GyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm 807 (888)
T KOG4236|consen 733 LAPEVLRNK---GYNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKM 807 (888)
T ss_pred cCHHHHhhc---cccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHH
Confidence 689999987 8999999999999999999999999753 3333444221 23344456799999999999999999
Q ss_pred CCCCCHHHHHH
Q 015234 79 RSRPLMTDILR 89 (411)
Q Consensus 79 ~~RPSa~eIL~ 89 (411)
++|.+....+.
T Consensus 808 ~kRysvdk~ls 818 (888)
T KOG4236|consen 808 RKRYSVDKSLS 818 (888)
T ss_pred HHhcchHhhcc
Confidence 99999877665
No 404
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.09 E-value=0.00069 Score=61.54 Aligned_cols=48 Identities=23% Similarity=0.324 Sum_probs=36.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCC-CCHH-HHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCG-RSVD-EIYDAVV 50 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~-~s~~-ei~~~Il 50 (411)
++||++.. ...++.++|+|+||+++++|++|+.||.. .+.. .+.+.+.
T Consensus 166 ~~pe~~~~--~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 166 LAPEVLLG--GKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred CCHhHhcC--CCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 57888731 23677899999999999999999999988 4444 5555553
No 405
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=96.97 E-value=0.00061 Score=71.64 Aligned_cols=77 Identities=19% Similarity=0.197 Sum_probs=52.8
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHhhhhcc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAVENVLLGCFEYDL 78 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p-~iP~~~p~~l~~LI~~CL~~DP 78 (411)
|+||++.+. .|+.++|||+||++++|++. -..++... ..+..+ +.+..| .+..+.| .-..|++.++...|
T Consensus 429 msPEQi~g~---~y~~kvdIyaLGlil~EL~~~f~T~~er~---~t~~d~-r~g~ip~~~~~d~p-~e~~ll~~lls~~p 500 (516)
T KOG1033|consen 429 MSPEQIRGQ---QYSEKVDIYALGLILAELLIQFSTQFERI---ATLTDI-RDGIIPPEFLQDYP-EEYTLLQQLLSPSP 500 (516)
T ss_pred CCHHHHhhh---hhhhhcchhhHHHHHHHHHHHhccHHHHH---Hhhhhh-hcCCCChHHhhcCc-HHHHHHHHhcCCCc
Confidence 899999976 89999999999999999987 33333322 122222 223222 2223343 34689999999999
Q ss_pred CCCCCHH
Q 015234 79 RSRPLMT 85 (411)
Q Consensus 79 ~~RPSa~ 85 (411)
.+||++.
T Consensus 501 ~~RP~~~ 507 (516)
T KOG1033|consen 501 EERPSAI 507 (516)
T ss_pred ccCchHH
Confidence 9999543
No 406
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.83 E-value=0.00039 Score=75.61 Aligned_cols=86 Identities=20% Similarity=0.200 Sum_probs=63.0
Q ss_pred CCCccccCCCCCCCCc-cccchhHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhcC-----CCCCCCCCCCHHHHHHHHH
Q 015234 1 MAPEQWQPEVRGPISF-ETDSWGFACSIIEMLTGVQPRCGRSVDEIY--DAVVRRQ-----EIPPIPSGLPPAVENVLLG 72 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~-ksDIWSlGviLyELltG~~Pf~~~s~~ei~--~~Il~~~-----~~p~iP~~~p~~l~~LI~~ 72 (411)
+|||++.+. .|.. ..||||.|++++.|.+|+.||.-....+.. ....... ....+...++.+.+.+|.+
T Consensus 491 ~apE~~~~~---~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~ 567 (601)
T KOG0590|consen 491 LAPEVLTGK---EYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYR 567 (601)
T ss_pred cCccccccc---ccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHH
Confidence 689999976 5554 799999999999999999999864332211 1100000 0112234578889999999
Q ss_pred hhhhccCCCCCHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILR 89 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~ 89 (411)
+|+.+|.+|.++++|++
T Consensus 568 ~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 568 MLQLDPTKRITIEQILN 584 (601)
T ss_pred HccCChhheecHHHHhh
Confidence 99999999999999987
No 407
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=96.81 E-value=0.0015 Score=74.14 Aligned_cols=86 Identities=19% Similarity=0.288 Sum_probs=55.8
Q ss_pred CCCccccCCC-------CCC-CCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcC-CCCC--CCCCCCHHHHH
Q 015234 1 MAPEQWQPEV-------RGP-ISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQ-EIPP--IPSGLPPAVEN 68 (411)
Q Consensus 1 MAPEvl~~~~-------~g~-ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~-~~p~--iP~~~p~~l~~ 68 (411)
+|||.+.... ..+ .+++-||||+||++.|+++ |+++|.- .+++..- +.+ ..+. +..--+..+++
T Consensus 194 iAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~aYr-~~~~~~~e~~Le~Ied~~~Rn 269 (1431)
T KOG1240|consen 194 IAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLAYR-SGNADDPEQLLEKIEDVSLRN 269 (1431)
T ss_pred cChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHHhHh-ccCccCHHHHHHhCcCccHHH
Confidence 5888776421 012 6678999999999999988 7888852 2222110 110 0000 00011237899
Q ss_pred HHHHhhhhccCCCCCHHHHHHH
Q 015234 69 VLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 69 LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
++..|++.||.+|.++++.|+.
T Consensus 270 lil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 270 LILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHccCchhccCHHHHHHh
Confidence 9999999999999999998763
No 408
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=96.76 E-value=0.0024 Score=59.49 Aligned_cols=87 Identities=20% Similarity=0.255 Sum_probs=61.8
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCC------------------CCC---
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVRRQEIP------------------PIP--- 59 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~~~~~p------------------~iP--- 59 (411)
+|.++.+. .-|++..|+||-||++.|+.. |.+-|.+.+..+.+.+|.+.-..+ .+|
T Consensus 169 ppdvlfga--kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypatt 246 (292)
T KOG0662|consen 169 PPDVLFGA--KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATT 246 (292)
T ss_pred Ccceeeee--ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccc
Confidence 45666553 268899999999999999987 888888887766666554321111 011
Q ss_pred ------CCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 60 ------SGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 60 ------~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+.+...-++++++++.-+|.+|.+++..+++
T Consensus 247 swsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 247 SWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred hHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1233445789999999999999999887654
No 409
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=96.75 E-value=0.0018 Score=70.22 Aligned_cols=80 Identities=23% Similarity=0.387 Sum_probs=52.2
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhcCC-------------------CCC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGR----SVDEIYDAVVRRQE-------------------IPP 57 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~----s~~ei~~~Il~~~~-------------------~p~ 57 (411)
++||++... ..|+..+|.|||||++|+..||..||... +..++...+..++. ..+
T Consensus 190 LhPel~E~q--~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP 267 (732)
T KOG4250|consen 190 LHPELYERQ--KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLP 267 (732)
T ss_pred cChHHHhhc--cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCC
Confidence 478888741 37899999999999999999999999864 22234433322211 112
Q ss_pred CCCCCCHHH----HHHHHHhhhhccCCCC
Q 015234 58 IPSGLPPAV----ENVLLGCFEYDLRSRP 82 (411)
Q Consensus 58 iP~~~p~~l----~~LI~~CL~~DP~~RP 82 (411)
+|..++..+ ...+..+|..+|++|-
T Consensus 268 ~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 268 QPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred CcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 333344333 3456677788888887
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=96.55 E-value=0.0014 Score=67.18 Aligned_cols=87 Identities=20% Similarity=0.267 Sum_probs=58.6
Q ss_pred CCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCC-----HHHHH---------H------H--HHh--------
Q 015234 2 APEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRS-----VDEIY---------D------A--VVR-------- 51 (411)
Q Consensus 2 APEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s-----~~ei~---------~------~--Il~-------- 51 (411)
|||++... +.-+++.|+||.|++++.++++..||.... ..++. + . +..
T Consensus 245 aPEvL~k~--~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~ 322 (418)
T KOG1167|consen 245 APEVLFRC--PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIP 322 (418)
T ss_pred chHHHhhc--cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccH
Confidence 79998753 456789999999999999999999987421 01110 0 0 000
Q ss_pred ---------------cCCCC-----CCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 52 ---------------RQEIP-----PIPSGLPPAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 52 ---------------~~~~p-----~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
+...+ ......+..+.+|+.+|++.||.+|.++++.|++
T Consensus 323 e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 323 ELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred HHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 00000 0012245578999999999999999999998764
No 411
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=96.51 E-value=0.0031 Score=71.26 Aligned_cols=107 Identities=15% Similarity=0.211 Sum_probs=83.6
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIP-PIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p-~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
++||.+.+. .....+|+|+.|++++|.++|.+||....+++++..+....... ..+...+.++.+++...+..+|.
T Consensus 1002 laPe~~lg~---~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~ 1078 (1205)
T KOG0606|consen 1002 LAPEILLGR---RHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPT 1078 (1205)
T ss_pred cCCcccccc---cCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCch
Confidence 478888875 67889999999999999999999999999999998886444322 23456888999999999999999
Q ss_pred CCCCHHHHHHHHHhhhccccCCCCCCCCCCCCCC
Q 015234 80 SRPLMTDILRVFKSSQNSVHSDGGWTGHGSRILP 113 (411)
Q Consensus 80 ~RPSa~eIL~~Le~l~~~~~~~~~w~~l~~r~~~ 113 (411)
+|..+.-.. +.-.+++|...+|..+......
T Consensus 1079 qr~~a~~~~---e~k~~~~~~~~~~~~l~~q~~~ 1109 (1205)
T KOG0606|consen 1079 QRLGAKGAA---EVKGHPFFQDVDWENLALQKAE 1109 (1205)
T ss_pred hccCccccc---ccccCCccCCCCccccccccCc
Confidence 998764211 2224578889999887666544
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=95.91 E-value=0.0026 Score=63.19 Aligned_cols=63 Identities=19% Similarity=0.327 Sum_probs=43.1
Q ss_pred CCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCCC
Q 015234 13 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSR 81 (411)
Q Consensus 13 ~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~R 81 (411)
.++.+.|.|++|+++|.++++..||........... .. -... ++|+.++.||..+|+.+|.+|
T Consensus 226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~----~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW----DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG----GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred eeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc----cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 477899999999999999999999987643321110 00 1112 788999999999999999987
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=95.90 E-value=0.03 Score=51.72 Aligned_cols=90 Identities=21% Similarity=0.280 Sum_probs=61.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhcCCC---CCCCCCC----CHHHHHH
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSV----DEIYDAVVRRQEI---PPIPSGL----PPAVENV 69 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~----~ei~~~Il~~~~~---p~iP~~~----p~~l~~L 69 (411)
+|||.+.......++...|+|++|+++++++++..||..... ......+...... ....... ...+.++
T Consensus 175 ~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (384)
T COG0515 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDL 254 (384)
T ss_pred CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHH
Confidence 578888752002578899999999999999999999887653 3444444322211 1111112 1578899
Q ss_pred HHHhhhhccCCCCCHHHHHHH
Q 015234 70 LLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 70 I~~CL~~DP~~RPSa~eIL~~ 90 (411)
+..|+..+|..|.+..+....
T Consensus 255 ~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 255 LKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHHHHhcCchhcCCHHHHhhc
Confidence 999999999999987766543
No 414
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=95.17 E-value=0.016 Score=57.17 Aligned_cols=87 Identities=18% Similarity=0.267 Sum_probs=55.9
Q ss_pred CCccccCCCCC--CCCccccchhHHHHHHHHHhCCCCCCCCCHHH----HHHHHHhcCCCCCCCC---CCCHHHHHHHHH
Q 015234 2 APEQWQPEVRG--PISFETDSWGFACSIIEMLTGVQPRCGRSVDE----IYDAVVRRQEIPPIPS---GLPPAVENVLLG 72 (411)
Q Consensus 2 APEvl~~~~~g--~ys~ksDIWSlGviLyELltG~~Pf~~~s~~e----i~~~Il~~~~~p~iP~---~~p~~l~~LI~~ 72 (411)
+||.+.....+ ..++.+|+|.||+++|.+++|.+||......+ -+.+. .++..+..|. .+++.+..+-++
T Consensus 188 ~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w-~~rk~~~~P~~F~~fs~~a~r~Fkk 266 (378)
T KOG1345|consen 188 APELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW-LKRKNPALPKKFNPFSEKALRLFKK 266 (378)
T ss_pred CcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH-hcccCccCchhhcccCHHHHHHHHH
Confidence 45554432112 34678999999999999999999998532111 11111 2233344443 377888888999
Q ss_pred hhhhccCCCCCHHHHHH
Q 015234 73 CFEYDLRSRPLMTDILR 89 (411)
Q Consensus 73 CL~~DP~~RPSa~eIL~ 89 (411)
-|..++.+|-...+..+
T Consensus 267 ~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 267 SLTPRFKDRCKIWTAKK 283 (378)
T ss_pred hcCCcccccchhHHHHH
Confidence 99999999954444443
No 415
>PF02237 BPL_C: Biotin protein ligase C terminal domain; InterPro: IPR003142 This C-terminal domain has an SH3-like barrel fold, the function of which is unknown. It is found associated with prokaryotic bifunctional transcriptional repressors [] and eukaryotic enzymes involved in biotin utilization [, ]. In Escherichia coli the biotin operon repressor (BirA) is a bifunctional protein. BirA acts both as the acetyl-coA carboxylase biotin holoenzyme synthetase (6.3.4.15 from EC) and as the biotin operon repressor. DNA sequence analysis of mutations indicates that the helix-turn-helix DNA binding region is located at the N terminus while mutations affecting enzyme function, although mapping over a large region, are found mainly in the central part of the protein's primary sequence [].; GO: 0006464 protein modification process; PDB: 3RUX_A 2CGH_A 3L1A_B 3L2Z_A 1HXD_A 1BIB_A 2EWN_B 1BIA_A 2EJ9_A 3FJP_A ....
Probab=86.31 E-value=1.7 Score=31.38 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=27.0
Q ss_pred cccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 251 VGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 251 ~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.||.|+++.+ +...+|++..||.+|.|+|+.++
T Consensus 2 lG~~V~v~~~-------------~~~~~G~~~gId~~G~L~v~~~~ 34 (48)
T PF02237_consen 2 LGQEVRVETG-------------DGEIEGIAEGIDDDGALLVRTED 34 (48)
T ss_dssp TTSEEEEEET-------------SCEEEEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEEC-------------CeEEEEEEEEECCCCEEEEEECC
Confidence 5788888752 23469999999999999999995
No 416
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=85.76 E-value=0.21 Score=54.58 Aligned_cols=87 Identities=15% Similarity=0.117 Sum_probs=62.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcCC--CCCCCCCCCHHHHHHHHHhhhhc
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIY-DAVVRRQE--IPPIPSGLPPAVENVLLGCFEYD 77 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~-~~Il~~~~--~p~iP~~~p~~l~~LI~~CL~~D 77 (411)
+|||...+. .......|+||.|+++..+++|..|+......... ........ .......++....+++.+++..+
T Consensus 196 ~a~E~~~~~--~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~ 273 (601)
T KOG0590|consen 196 GAPEHLSGK--AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKEN 273 (601)
T ss_pred CCcccccch--hhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCC
Confidence 578888763 23467899999999999999999999865433222 11111111 12335568888999999999999
Q ss_pred cCCCCCHHHHHH
Q 015234 78 LRSRPLMTDILR 89 (411)
Q Consensus 78 P~~RPSa~eIL~ 89 (411)
|..|.+.+++..
T Consensus 274 ~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 274 PSNRLSIEELKL 285 (601)
T ss_pred chhccccccccc
Confidence 999999888754
No 417
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=85.19 E-value=1.7 Score=32.45 Aligned_cols=38 Identities=21% Similarity=0.377 Sum_probs=32.6
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.|++|+.|-++-.- .++|-.|+|..++++++..|.|++
T Consensus 2 ~~~~G~~Ve~~~~~-----------~~~W~~a~V~~~~~~~~~~V~~~~ 39 (61)
T smart00743 2 DFKKGDRVEVFSKE-----------EDSWWEAVVTKVLGDGKYLVRYLT 39 (61)
T ss_pred CcCCCCEEEEEECC-----------CCEEEEEEEEEECCCCEEEEEECC
Confidence 58899999887542 567999999999998999999996
No 418
>PF15057 DUF4537: Domain of unknown function (DUF4537)
Probab=84.54 E-value=4.7 Score=35.14 Aligned_cols=88 Identities=20% Similarity=0.192 Sum_probs=67.3
Q ss_pred cceeeeccCCCCCcceEEEeeeCCCCcEEEEecccccccccCCcccc----cccceecccEEEeeccccccccCCCCCCC
Q 015234 198 GDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQ----MAESYCVGQFVRLKANVVSPQFEWPRKRE 273 (411)
Q Consensus 198 gd~vr~~~~~~~~~~vg~~~~i~~~g~~~~~~~~~~~~w~~~~~~~~----~~~~~~~g~~vr~~~~~~~pr~~w~~~~~ 273 (411)
|.||--+.+..++=--|.|++...+|.+.|-|...++-..-...-++ |-.++.+||+|-.+ |+....
T Consensus 1 g~~VlAR~~~DG~YY~GtV~~~~~~~~~lV~f~~~~~~~v~~~~iI~~~~~~~~~L~~GD~VLA~---------~~~~~~ 71 (124)
T PF15057_consen 1 GQKVLARREEDGFYYPGTVKKCVSSGQFLVEFDDGDTQEVPISDIIALSDAMRHSLQVGDKVLAP---------WEPDDC 71 (124)
T ss_pred CCeEEEeeCCCCcEEeEEEEEccCCCEEEEEECCCCEEEeChHHeEEccCcccCcCCCCCEEEEe---------cCcCCC
Confidence 67888887778888889999999999999999554554444333222 24679999999876 555554
Q ss_pred CccceeEEEE-----EecCCeEEEecC
Q 015234 274 GVWATGRICM-----VVPNGCLIVRFP 295 (411)
Q Consensus 274 ~~~~~g~i~~-----~~~~g~l~~~~~ 295 (411)
. +.-|+|.. ...+..+.|.|-
T Consensus 72 ~-Y~Pg~V~~~~~~~~~~~~~~~V~f~ 97 (124)
T PF15057_consen 72 R-YGPGTVIAGPERRASEDKEYTVRFY 97 (124)
T ss_pred E-EeCEEEEECccccccCCceEEEEEE
Confidence 3 78899998 889999999997
No 419
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=83.93 E-value=0.32 Score=53.34 Aligned_cols=85 Identities=16% Similarity=0.170 Sum_probs=57.9
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh---cCCCCCCCCCCCHHHHHHHHHhhhh
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLT-GVQPRCGRSVDEIYDAVVR---RQEIPPIPSGLPPAVENVLLGCFEY 76 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELlt-G~~Pf~~~s~~ei~~~Il~---~~~~p~iP~~~p~~l~~LI~~CL~~ 76 (411)
.|||++... .-+.++|++|+|+.+|.+.. |+.-+...... +.+.... +.........+|.++++-+.+++..
T Consensus 176 ~apE~~~~~---~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 176 LAPEYLLGT---TNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-LSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccchhhccc---cccccccceeeeeEEEEEecCCcchhhccCCc-chhhhhhcccccccccccccCcHHHHHHHHHHhcC
Confidence 489998864 56789999999999999885 44444333221 1111111 1112234567899999999999999
Q ss_pred ccCCCCCHHHHHH
Q 015234 77 DLRSRPLMTDILR 89 (411)
Q Consensus 77 DP~~RPSa~eIL~ 89 (411)
++.-||++..+..
T Consensus 252 ~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 252 DSAVRPTLDLLLS 264 (700)
T ss_pred CcccCcchhhhhc
Confidence 9999997666543
No 420
>PF12073 DUF3553: Protein of unknown function (DUF3553); InterPro: IPR021938 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 60 amino acids in length. This protein has two conserved sequence motifs: GQVQS and TVNF.
Probab=81.52 E-value=5.2 Score=29.70 Aligned_cols=37 Identities=19% Similarity=0.308 Sum_probs=28.9
Q ss_pred CccceeEEEEEecCCeEEEecCCCccCCccCccccccCCceeEEe
Q 015234 274 GVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVT 318 (411)
Q Consensus 274 ~~~~~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~~~ 318 (411)
-.|-+|.|.. ..+|++.|.|+. .++- ..|.+-|++..
T Consensus 13 pdWG~GqVqS-~i~~rvTVnF~~------aGK~-vI~~~~v~L~~ 49 (52)
T PF12073_consen 13 PDWGIGQVQS-NIGGRVTVNFEH------AGKK-VIDGSRVALEK 49 (52)
T ss_pred CCCcceEEEE-ecCCeEEEeecc------CCeE-EEeccEEEEEE
Confidence 3578999988 778899999994 4445 78888887764
No 421
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=79.34 E-value=6 Score=39.34 Aligned_cols=84 Identities=13% Similarity=0.137 Sum_probs=57.3
Q ss_pred CCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhcCCCCCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHH
Q 015234 13 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAV---VRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89 (411)
Q Consensus 13 ~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~I---l~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~ 89 (411)
..+.+.|+||++-++.|++.|..||.+.........+ .............+.++..+...+-..+...+|....+..
T Consensus 213 e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 213 EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 4567899999999999999999999876432222222 1111111123445677888887777788999999888877
Q ss_pred HHHhhhc
Q 015234 90 VFKSSQN 96 (411)
Q Consensus 90 ~Le~l~~ 96 (411)
.|+....
T Consensus 293 ~l~~~~~ 299 (322)
T KOG1164|consen 293 LLKDVFD 299 (322)
T ss_pred HHHHHHH
Confidence 7655544
No 422
>cd04483 hOBFC1_like hOBFC1_like: A subfamily of OB folds similar to that found in human OB fold containing protein 1 (hOBFC1). Members of this group belong to the Replication protein A subunit 2 (RPA2) family of OB folds. RPA is a nuclear ssDNA binding protein (SSB) which appears to be involved in all aspects of DNA metabolism including replication, recombination, and repair. RPA also mediates specific interactions of various nuclear proteins. In animals, plants, and fungi, RPA is a heterotrimer with subunits of 70KDa (RPA1), 32kDa (RPA2), and 14 KDa (RPA3). The OB fold domain of RPA2 has dual roles in ssDNA binding and trimerization.
Probab=75.78 E-value=3.9 Score=33.67 Aligned_cols=22 Identities=14% Similarity=0.397 Sum_probs=19.6
Q ss_pred ccccceecccEEEeeccccccc
Q 015234 244 QMAESYCVGQFVRLKANVVSPQ 265 (411)
Q Consensus 244 ~~~~~~~~g~~vr~~~~~~~pr 265 (411)
+.++.+.+|+.|||+..|.+-|
T Consensus 58 ~~~~~i~~G~vvrV~G~i~~fr 79 (92)
T cd04483 58 KQAKVLEIGDLLRVRGSIRTYR 79 (92)
T ss_pred ccccccCCCCEEEEEEEEeccC
Confidence 6778899999999999998876
No 423
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=74.26 E-value=2.3 Score=37.07 Aligned_cols=27 Identities=22% Similarity=0.450 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhhccCCCCCHHHHHHH
Q 015234 64 PAVENVLLGCFEYDLRSRPLMTDILRV 90 (411)
Q Consensus 64 ~~l~~LI~~CL~~DP~~RPSa~eIL~~ 90 (411)
..+.+++..|++.+|++||++.+++++
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 578899999999999999999998764
No 424
>smart00333 TUDOR Tudor domain. Domain of unknown function present in several RNA-binding proteins. 10 copies in the Drosophila Tudor protein. Initial proposal that the survival motor neuron gene product contain a Tudor domain are corroborated by more recent database search techniques such as PSI-BLAST (unpublished).
Probab=72.72 E-value=7.1 Score=28.38 Aligned_cols=37 Identities=30% Similarity=0.501 Sum_probs=31.3
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
++++|+.|..+ | ..+.|-+++|..|++++...|.|-+
T Consensus 2 ~~~~G~~~~a~---------~---~d~~wyra~I~~~~~~~~~~V~f~D 38 (57)
T smart00333 2 TFKVGDKVAAR---------W---EDGEWYRARIIKVDGEQLYEVFFID 38 (57)
T ss_pred CCCCCCEEEEE---------e---CCCCEEEEEEEEECCCCEEEEEEEC
Confidence 57889999887 3 2557999999999999899999986
No 425
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=71.35 E-value=2.5 Score=43.19 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=43.4
Q ss_pred CCccccchhHHHHHHHHHhCCCC-CCCCC---HHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhccCCCCCHHHHHH
Q 015234 14 ISFETDSWGFACSIIEMLTGVQP-RCGRS---VDEIYDAVVRRQEIPPIPSGLPPAVENVLLGCFEYDLRSRPLMTDILR 89 (411)
Q Consensus 14 ys~ksDIWSlGviLyELltG~~P-f~~~s---~~ei~~~Il~~~~~p~iP~~~p~~l~~LI~~CL~~DP~~RPSa~eIL~ 89 (411)
.+.++|||+||....||..+..- -.+.+ .++....+.- . . -...-+.++.+|++.+|..||+|.+++.
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~-~----l---en~lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVII-G----L---ENGLQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhee-e----c---cCccccCcCcccccCCCCCCcchhhhhc
Confidence 44689999999999999876432 22221 1222222110 0 0 0112356788999999999999998876
Q ss_pred H
Q 015234 90 V 90 (411)
Q Consensus 90 ~ 90 (411)
|
T Consensus 331 H 331 (458)
T KOG1266|consen 331 H 331 (458)
T ss_pred C
Confidence 4
No 426
>PF02211 NHase_beta: Nitrile hydratase beta subunit; InterPro: IPR024690 Nitrile hydratases (EC:4.2.1.84) are unusual metalloenzymes that catalyse the hydration of nitriles to their corresponding amides. They are used as biocatalysts in acrylamide production, one of the few commercial scale bioprocesses, as well as in environmental remediation for the removal of nitriles from waste streams. Nitrile hydratases are composed of two subunits, alpha and beta, and they contain one iron atom per alpha beta unit []. This entry represents the structural domain of nitrile hydratase beta subunit which contains irregular array of helices in the N-terminal extension.; GO: 0018822 nitrile hydratase activity; PDB: 2DXB_H 2DD5_K 2DD4_H 2ZZD_B 2DXC_H 1AHJ_F 2ZPE_B 2ZCF_B 2D0Q_B 2CZ7_B ....
Probab=62.53 E-value=6.2 Score=37.94 Aligned_cols=50 Identities=26% Similarity=0.308 Sum_probs=22.2
Q ss_pred ccccCCcccc--cccceecccEEEeeccccccccCCCCCCCCccceeEEEEEec
Q 015234 235 LWKGHFSELQ--MAESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVP 286 (411)
Q Consensus 235 ~w~~~~~~~~--~~~~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~ 286 (411)
+.+|.+++-+ ....|.|||.||+|.--...---=|+-..| .+|+|..+..
T Consensus 119 l~~G~p~~r~~~~~~~F~vGd~Vrv~~~~~~~HtR~P~Y~rg--~~G~I~~~~g 170 (222)
T PF02211_consen 119 LARGDPADRPVDAPPRFAVGDRVRVRNLPPPGHTRLPRYVRG--KTGTIERVHG 170 (222)
T ss_dssp HHH----EETTSSS-SS-TT-EEEE-----SS--SS-GGGTT---EEEEEEEEE
T ss_pred hhcCCCccCCCCCCCCCCCCCEEEECCCCCCCcccccHhhCC--CeeEEEEEec
Confidence 3444444433 356799999999998544433333444455 7999997753
No 427
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=60.76 E-value=6.5 Score=42.65 Aligned_cols=75 Identities=19% Similarity=0.289 Sum_probs=45.0
Q ss_pred CCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC-----------CCCCCCHHHHHHHHHhhhhccCCC
Q 015234 13 PISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQEIPP-----------IPSGLPPAVENVLLGCFEYDLRSR 81 (411)
Q Consensus 13 ~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~~p~-----------iP~~~p~~l~~LI~~CL~~DP~~R 81 (411)
+.+.++|||++|.++.++.-|..-+......+....+.. -...+ +--.++.....+...|+...|..|
T Consensus 107 ~~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k-~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir 185 (725)
T KOG1093|consen 107 PIGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLK-YYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIR 185 (725)
T ss_pred CCCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-hccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccc
Confidence 345699999999999999887655544333222222211 00000 011245556677888999889888
Q ss_pred CCHHHHH
Q 015234 82 PLMTDIL 88 (411)
Q Consensus 82 PSa~eIL 88 (411)
|...++.
T Consensus 186 ~l~~~~~ 192 (725)
T KOG1093|consen 186 PLPMELS 192 (725)
T ss_pred cchhHHh
Confidence 8655543
No 428
>COG0250 NusG Transcription antiterminator [Transcription]
Probab=57.45 E-value=20 Score=33.27 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=30.5
Q ss_pred cceecccEEEeeccccccccCCCCCCCCccceeEEEEEecC-CeEEEecC
Q 015234 247 ESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPN-GCLIVRFP 295 (411)
Q Consensus 247 ~~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~-g~l~~~~~ 295 (411)
..|.+||.|||..+... .-.|+|..||.+ ++|.|...
T Consensus 122 ~~~e~Gd~VrI~~GpFa------------~f~g~V~evd~ek~~~~v~v~ 159 (178)
T COG0250 122 VDFEPGDVVRIIDGPFA------------GFKAKVEEVDEEKGKLKVEVS 159 (178)
T ss_pred ccCCCCCEEEEeccCCC------------CccEEEEEEcCcCcEEEEEEE
Confidence 45999999999987653 268999999999 88887665
No 429
>PF11061 DUF2862: Protein of unknown function (DUF2862); InterPro: IPR021291 This family of proteins has no known function.
Probab=54.63 E-value=14 Score=28.70 Aligned_cols=53 Identities=19% Similarity=0.268 Sum_probs=33.1
Q ss_pred cccEEEeeccccccccCCC-CCCCCccceeEEEE---EecCC-eEEEecCCCccCCccCccccc
Q 015234 251 VGQFVRLKANVVSPQFEWP-RKREGVWATGRICM---VVPNG-CLIVRFPGRLTFGEQCSSFLA 309 (411)
Q Consensus 251 ~g~~vr~~~~~~~pr~~w~-~~~~~~~~~g~i~~---~~~~g-~l~~~~~~~~~~~~~~~~~~~ 309 (411)
+||+|||+..-.-=|..=. .+.=+..++|+|+. +|.+| -++|+|+. ..++|+=
T Consensus 1 IGqkVrV~~~~irDRi~~~l~~~l~~~~~g~I~~fKmtDG~giG~vv~~~n------g~~~WFF 58 (64)
T PF11061_consen 1 IGQKVRVNLSRIRDRIPKELVDKLGKNPIGTIKGFKMTDGSGIGVVVEFSN------GSRTWFF 58 (64)
T ss_pred CCCEEEEeehhhhhhccHHHHHHhccCCcEEEEEEEEecCCcEEEEEEecC------CceeEEc
Confidence 6999999554443332110 01112246999975 57777 89999995 6668864
No 430
>cd04466 S1_YloQ_GTPase S1_YloQ_GTPase: YloQ GTase family (also known as YjeQ and CpgA), S1-like RNA-binding domain. Proteins in the YloQ GTase family bind the ribosome and have GTPase activity. The precise role of this family is unknown. The protein structure is composed of three domains: an N-terminal S1 domain, a central GTPase domain, and a C-terminal zinc finger domain. This N-terminal S1 domain binds ssRNA. The central GTPase domain contains nucleotide-binding signature motifs: G1 (walker A), G3 (walker B) and G4 motifs. Experiments show that the bacterial YloQ and YjeQ proteins have low intrinsic GTPase activity. The C-terminal zinc-finger domain has structural similarity to a portion of the DNA-repair protein Rad51. This suggests a possible role for this GTPase as a regulator of translation, perhaps as a translation initiation factor. This family is classified based on the N-terminal S1 domain.
Probab=53.04 E-value=13 Score=27.98 Aligned_cols=26 Identities=31% Similarity=0.396 Sum_probs=16.7
Q ss_pred cCccccceeeeccCCCCCcceEEEeeeCC
Q 015234 193 FGLAAGDWVRLKEEDRRHSPVGILHSIQR 221 (411)
Q Consensus 193 ~~~~~gd~vr~~~~~~~~~~vg~~~~i~~ 221 (411)
.-+++||||-+...+. .-++++.|-.
T Consensus 36 ~~~~VGD~V~~~~~~~---~~~~I~~vl~ 61 (68)
T cd04466 36 NPPAVGDRVEFEPEDD---GEGVIEEILP 61 (68)
T ss_pred CCCCCCcEEEEEECCC---CcEEEEEEec
Confidence 4579999998864332 2366666643
No 431
>PF04717 Phage_base_V: Phage-related baseplate assembly protein; InterPro: IPR006531 This domain occurs in a family of phage (and bacteriocin) proteins related to the phage P2 V gene product, which forms the small spike at the tip of the tail []. Homologs in general are annotated as baseplate assembly protein V. At least one member is encoded within a region of Pectobacterium carotovorum (Erwinia carotovora) described as a bacteriocin, a phage tail-derived module able to kill bacteria closely related to the host strain. It is also found in Vgr-related proteins. Genes encoding type VI secretion systems (T6SS) are widely distributed in pathogenic Gram-negative bacterial species. In Vibrio cholerae, T6SS have been found to secrete three related proteins extracellularly, VgrG-1, VgrG-2, and VgrG-3. VgrG-1 can covalently cross-link actin in vitro, and this activity was used to demonstrate that V. cholerae can translocate VgrG-1 into macrophages by a T6SS-dependent mechanism. VgrG-related proteins likely assemble into a trimeric complex that is analogous to that formed by the two trimeric proteins gp27 and gp5 that make up the baseplate "tail spike" of Escherichia coli bacteriophage T4. The VgrG components of the T6SS apparatus might assemble a "cell-puncturing device" analogous to phage tail spikes to deliver effector protein domains through membranes of target host cells []. Gp5 is an integral component of the virion baseplate of bacteriophage T4. T4 Gp5 consists of 3 domains connected via long linkers: the N-terminal oligosaccharide/oligonucleotide-binding (OB)-fold domain, the middle lysozyme domain, and the C-terminal triplestranded-helix. The equivalent of the Gp5 OB-fold domain in the structure of VgrG is the domain of unknown function comprising residues 380-470 and conserved in all known VgrGs. This entry represents the OB-fold domain which consists of a 5-stranded antiparallel-barrel with a Greek-key topology [].; PDB: 3AQJ_C 3QR8_A 2P5Z_X.
Probab=52.34 E-value=14 Score=29.06 Aligned_cols=17 Identities=47% Similarity=0.884 Sum_probs=14.4
Q ss_pred eEEEEEecC-CeEEEecC
Q 015234 279 GRICMVVPN-GCLIVRFP 295 (411)
Q Consensus 279 g~i~~~~~~-g~l~~~~~ 295 (411)
|+|++|+++ |++||+|+
T Consensus 1 G~V~~v~~~~grvrV~~~ 18 (79)
T PF04717_consen 1 GTVTAVDPDKGRVRVRFP 18 (79)
T ss_dssp EEEEEEETTTTEEEEE-B
T ss_pred CeEEEEECCCCEEEEEEe
Confidence 899999987 99999994
No 432
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=48.98 E-value=45 Score=35.60 Aligned_cols=82 Identities=28% Similarity=0.423 Sum_probs=51.8
Q ss_pred CCccccchhHHHHHHHHHhC-CCCCCCC-------CHHH-HHHH--H-----HhcCCCCC---CC-CCCCHHHHHHHHHh
Q 015234 14 ISFETDSWGFACSIIEMLTG-VQPRCGR-------SVDE-IYDA--V-----VRRQEIPP---IP-SGLPPAVENVLLGC 73 (411)
Q Consensus 14 ys~ksDIWSlGviLyELltG-~~Pf~~~-------s~~e-i~~~--I-----l~~~~~p~---iP-~~~p~~l~~LI~~C 73 (411)
-+...|.|.+++++++++.| +.||.+. ++.+ -+.. . ...+++++ +| .-+++.+..|..+|
T Consensus 198 r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qa 277 (637)
T COG4248 198 RTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQA 277 (637)
T ss_pred CCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHH
Confidence 34578999999999999885 9999873 1222 1110 0 00111111 11 23788899999999
Q ss_pred hhhc--cCCCCCHHHHHHHHHhhh
Q 015234 74 FEYD--LRSRPLMTDILRVFKSSQ 95 (411)
Q Consensus 74 L~~D--P~~RPSa~eIL~~Le~l~ 95 (411)
+... +.-||+++.-+..|..+.
T Consensus 278 F~~~~~~~~RP~a~aW~aAl~al~ 301 (637)
T COG4248 278 FTESGVATPRPTAKAWVAALDALR 301 (637)
T ss_pred hcccCCCCCCCCHHHHHHHHHHHH
Confidence 9843 568999887766554443
No 433
>cd02794 MopB_CT_DmsA-EC The MopB_CT_DmsA-EC CD includes the DmsA enzyme of the dmsABC operon encoding the anaerobic dimethylsulfoxide reductase (DMSOR) of Escherichia coli and other related DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this group has a predicted N-terminal iron-sulfur [4Fe-4S] cluster binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=48.43 E-value=34 Score=28.83 Aligned_cols=25 Identities=16% Similarity=0.238 Sum_probs=21.5
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||||+|...
T Consensus 31 ~v~i~p~~A~~~--gi~~Gd~V~v~s~ 55 (121)
T cd02794 31 EVWINPLDAAAR--GIKDGDRVLVFND 55 (121)
T ss_pred CEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 457889999977 9999999999855
No 434
>cd02783 MopB_CT_2 The MopB_CT_2 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=47.65 E-value=16 Score=32.78 Aligned_cols=25 Identities=28% Similarity=0.602 Sum_probs=20.8
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||||+|...
T Consensus 33 ~v~inp~dA~~~--GI~dGd~V~v~s~ 57 (156)
T cd02783 33 YLYMHPKTAKEL--GIKDGDWVWVESV 57 (156)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 356788899876 9999999999864
No 435
>cd02787 MopB_CT_ydeP The MopB_CT_ydeP CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=45.82 E-value=46 Score=27.62 Aligned_cols=25 Identities=32% Similarity=0.509 Sum_probs=21.6
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||+|+|...
T Consensus 32 ~v~i~p~dA~~l--gI~dGd~V~v~s~ 56 (112)
T cd02787 32 VVFMNPDDIARL--GLKAGDRVDLESA 56 (112)
T ss_pred EEEECHHHHHHh--CCCCCCEEEEEec
Confidence 467889999977 9999999999865
No 436
>cd02784 MopB_CT_PHLH The MopB_CT_PHLH CD includes a group of related uncharacterized putative hydrogenase-like homologs (PHLH) of molybdopterin binding proteins. This CD is of the PHLH region homologous to the conserved molybdopterin-binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=45.59 E-value=19 Score=31.88 Aligned_cols=25 Identities=32% Similarity=0.446 Sum_probs=21.3
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.|+++. ||+-||+|+|...
T Consensus 39 ~v~InP~dA~~l--GI~dGD~V~V~s~ 63 (137)
T cd02784 39 AALVSPRTAEAL--GLLQGDVVRIRRG 63 (137)
T ss_pred eEEECHHHHHHc--CCCCCCEEEEEeC
Confidence 356789999977 9999999999865
No 437
>cd02789 MopB_CT_FmdC-FwdD The MopB_FmdC-FwdD CD includes the C-terminus of subunit C of molybdenum formylmethanofuran dehydrogenase (FmdC) and subunit D of tungsten formylmethanofuran dehydrogenase (FwdD), and other related proteins. Formylmethanofuran dehydrogenase catalyzes the first step in methane formation from CO2 in methanogenic archaea and some eubacteria. Members of this CD belong to the molybdopterin_binding superfamily of proteins. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=45.20 E-value=36 Score=28.36 Aligned_cols=25 Identities=20% Similarity=0.314 Sum_probs=21.4
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. |++.||||+|+..
T Consensus 32 ~v~i~p~dA~~l--gi~~Gd~V~v~~~ 56 (106)
T cd02789 32 YCEINPEDYKLL--GKPEGDKVKVTSE 56 (106)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 467789999977 9999999999854
No 438
>PRK05609 nusG transcription antitermination protein NusG; Validated
Probab=44.86 E-value=31 Score=31.30 Aligned_cols=54 Identities=20% Similarity=0.283 Sum_probs=38.0
Q ss_pred hcCccccceeeeccCCCCCcceEEEeeeCC-CC--cEEEEecccccccccCCcccccc
Q 015234 192 TFGLAAGDWVRLKEEDRRHSPVGILHSIQR-DG--SVAVGFLGLETLWKGHFSELQMA 246 (411)
Q Consensus 192 ~~~~~~gd~vr~~~~~~~~~~vg~~~~i~~-~g--~~~~~~~~~~~~w~~~~~~~~~~ 246 (411)
+.+|.+||.||+... -=.+-.|+|-.|++ .+ .|.+.++|..+...-..++||++
T Consensus 124 ~~~~~~Gd~VrI~~G-Pf~G~~g~v~~i~~~~~r~~v~l~~~G~~~~v~l~~~~l~~~ 180 (181)
T PRK05609 124 KVDFEVGEMVRVIDG-PFADFNGTVEEVDYEKSKLKVLVSIFGRETPVELEFSQVEKI 180 (181)
T ss_pred ccCCCCCCEEEEecc-CCCCCEEEEEEEeCCCCEEEEEEEECCCceEEEEchHHEEEc
Confidence 357899999999854 33456788888874 33 35667788777777666666553
No 439
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=44.19 E-value=11 Score=40.61 Aligned_cols=83 Identities=16% Similarity=0.106 Sum_probs=51.5
Q ss_pred CCCccccCCCCCCCCccccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHhhhhccC
Q 015234 1 MAPEQWQPEVRGPISFETDSWGFACSIIEMLTGVQPRCGRSVDEIYDAVVRRQE-IPPIPSGLPPAVENVLLGCFEYDLR 79 (411)
Q Consensus 1 MAPEvl~~~~~g~ys~ksDIWSlGviLyELltG~~Pf~~~s~~ei~~~Il~~~~-~p~iP~~~p~~l~~LI~~CL~~DP~ 79 (411)
|+||..++ .++...|+|++|.++.+...+............. .+ +..+ +..+-...+.++...+..++..+|.
T Consensus 295 ~~ke~~~~----l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-~~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~ 368 (524)
T KOG0601|consen 295 AAKELLNG----LATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-QL-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPR 368 (524)
T ss_pred eChhhhcc----ccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-cc-ccccCchhhhcCcchhhhhHHHHhcCcchh
Confidence 56777775 5788999999999999887765443322100000 00 1111 1112223445666688889999999
Q ss_pred CCCCHHHHHH
Q 015234 80 SRPLMTDILR 89 (411)
Q Consensus 80 ~RPSa~eIL~ 89 (411)
.|+++..++.
T Consensus 369 ~~~~~q~~~~ 378 (524)
T KOG0601|consen 369 LRLTAQILTA 378 (524)
T ss_pred hhhHHHHHhc
Confidence 9999877665
No 440
>PF02359 CDC48_N: Cell division protein 48 (CDC48), N-terminal domain; InterPro: IPR003338 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The VAT protein of the archaebacterium Thermoplasma acidophilum, like all other members of the Cdc48/p97 family of AAA ATPases, has two ATPase domains and a 185-residue amino-terminal substrate-recognition domain, VAT-N. VAT shows activity in protein folding and unfolding and thus shares the common function of these ATPases in disassembly and/or degradation of protein complexes. VAT-N is composed of two equally sized subdomains. The amino-terminal subdomain VAT-Nn forms a double-psi beta-barrel whose pseudo-twofold symmetry is mirrored by an internal sequence repeat of 42 residues. The carboxy-terminal subdomain VAT-Nc forms a novel six-stranded beta-clam fold []. Together, VAT-Nn and VAT-Nc form a kidney-shaped structure, in close agreement with results from electron microscopy. VAT-Nn is related to numerous proteins including prokaryotic transcription factors, metabolic enzymes, the protease cofactors UFD1 and PrlF, and aspartic proteinases. ; GO: 0005524 ATP binding; PDB: 1CZ4_A 1CZ5_A 3CF3_C 3CF1_A 3CF2_A 1S3S_D 1E32_A 1R7R_A 2PJH_B 1CR5_B ....
Probab=43.72 E-value=22 Score=28.64 Aligned_cols=64 Identities=23% Similarity=0.388 Sum_probs=44.8
Q ss_pred cccCchhhhhhhcCccccceeeeccCCCCCcceEEEeeeCCC--CcEEEEecccccccccCCcccccccceecccEEEee
Q 015234 181 LRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQRD--GSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLK 258 (411)
Q Consensus 181 ~r~~~s~lErv~~~~~~gd~vr~~~~~~~~~~vg~~~~i~~~--g~~~~~~~~~~~~w~~~~~~~~~~~~~~~g~~vr~~ 258 (411)
-+.++.+++.+ ++..||-|.++- .+ +.+.+|.+...+ +.=.|+|-+.+..|-| +..||.|.|+
T Consensus 18 v~v~~~~m~~l--~l~~gd~v~i~g-~~--~tv~~v~~~~~~~~~~g~I~l~~~~R~n~~----------v~igd~V~V~ 82 (87)
T PF02359_consen 18 VRVSPEDMEEL--GLFPGDVVLISG-KR--KTVAFVFPDRPDDSPPGVIRLSGIQRKNAG----------VSIGDRVTVR 82 (87)
T ss_dssp EEEEHHHHHCT--TT-TTEEEEEET-TT--EEEEEEEEECCSTTCTTEEEE-HHHHHHCT------------TTSEEEEE
T ss_pred EEEcHHHHHHc--CCCCccEEEEeC-Cc--eEEEEEEECCCCCCCCCEEEECHHHHhhCC----------cCCCCEEEEE
Confidence 45678888876 999999999987 22 288889888765 4456667676777754 5678888887
Q ss_pred c
Q 015234 259 A 259 (411)
Q Consensus 259 ~ 259 (411)
.
T Consensus 83 ~ 83 (87)
T PF02359_consen 83 P 83 (87)
T ss_dssp E
T ss_pred E
Confidence 4
No 441
>cd02777 MopB_CT_DMSOR-like The MopB_CT_DMSOR-like CD contains dimethylsulfoxide reductase (DMSOR), biotin sulfoxide reductase (BSOR), trimethylamine N-oxide reductase (TMAOR) and other related proteins. DMSOR always catalyzes the reduction of DMSO to dimethylsulfide, but its cellular location and oligomerization state are organism-dependent. For example, in Rhodobacter sphaeriodes and Rhodobacter capsulatus, it is an 82-kDa monomeric soluble protein found in the periplasmic space; in E. coli, it is membrane-bound and exists as a heterotrimer. BSOR catalyzes the reduction of biotin sulfixode to biotin, and is unique among Mo enzymes because no additional auxiliary proteins or cofactors are required. TMAOR is similar to DMSOR, but its only natural substrate is TMAO. Also included in this group is the pyrogallol-phloroglucinol transhydroxylase from Pelobacter acidigallici. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB hom
Probab=43.45 E-value=17 Score=31.03 Aligned_cols=25 Identities=24% Similarity=0.435 Sum_probs=21.3
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....++.++++. ||+.||+|+|...
T Consensus 35 ~v~i~p~dA~~l--gi~~Gd~V~v~s~ 59 (127)
T cd02777 35 PVWINPLDAAAR--GIKDGDIVRVFND 59 (127)
T ss_pred eEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 467788999976 9999999999854
No 442
>CHL00125 psaE photosystem I subunit IV; Reviewed
Probab=42.74 E-value=24 Score=27.14 Aligned_cols=32 Identities=19% Similarity=0.366 Sum_probs=26.5
Q ss_pred Cccccceeee-ccCCCCCcceEEEeeeCCCCcE
Q 015234 194 GLAAGDWVRL-KEEDRRHSPVGILHSIQRDGSV 225 (411)
Q Consensus 194 ~~~~gd~vr~-~~~~~~~~~vg~~~~i~~~g~~ 225 (411)
|++-||.||+ |+|+-=...||.|-+|+.+|..
T Consensus 1 mi~rGskVrIlR~ESYWyn~vGtV~svd~~gi~ 33 (64)
T CHL00125 1 MVKRGSKVRILRKESYWYNEIGTVATVDQSGIR 33 (64)
T ss_pred CcccCCEEEEccccceeecCcceEEEEcCCCCC
Confidence 5788999998 5777777789999999999853
No 443
>PF13437 HlyD_3: HlyD family secretion protein
Probab=42.66 E-value=60 Score=26.33 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=24.4
Q ss_pred cccccee-cccEEEeeccccccccCCCCCCCCccceeEEEEEecC
Q 015234 244 QMAESYC-VGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPN 287 (411)
Q Consensus 244 ~~~~~~~-~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~ 287 (411)
+.+..++ +||.|+++.. ..+.+ .-.|+|+.|.+.
T Consensus 45 ~~~~~i~~~g~~v~v~~~------~~~~~----~~~g~V~~I~~~ 79 (105)
T PF13437_consen 45 KDIARIKDPGQKVTVRLD------PGPEK----TIEGKVSSISPS 79 (105)
T ss_pred HhhcceEeCCCEEEEEEC------CCCCc----EEEEEEEEEeCc
Confidence 3456676 9999999976 22222 368999999983
No 444
>cd02792 MopB_CT_Formate-Dh-Na-like Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. This CD (MopB_CT_Formate-Dh-Na-like) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=42.20 E-value=19 Score=30.10 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=21.2
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....++.+.++. ||+.||||+|+..
T Consensus 36 ~v~i~p~dA~~l--gi~~Gd~V~v~s~ 60 (122)
T cd02792 36 FVEISPELAAER--GIKNGDMVWVSSP 60 (122)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 356788899977 9999999999865
No 445
>cd02778 MopB_CT_Thiosulfate-R-like The MopB_CT_Thiosulfate-R-like CD contains thiosulfate-, sulfur-, and polysulfide-reductases, and other related proteins. Thiosulfate reductase catalyzes the cleavage of sulfur-sulfur bonds in thiosulfate. Polysulfide reductase is a membrane-bound enzyme that catalyzes the reduction of polysulfide using either hydrogen or formate as the electron donor. Also included in this CD is the phenylacetyl-CoA:acceptor oxidoreductase, large subunit (PadB2), which has been characterized as a membrane-bound molybdenum-iron-sulfur enzyme involved in anaerobic metabolism of phenylalanine in the denitrifying bacterium Thauera aromatica. The MopB_CT_Thiosulfate-R-like CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=40.71 E-value=21 Score=30.03 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=21.1
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||||+|...
T Consensus 31 ~v~i~p~dA~~~--gi~~Gd~V~v~s~ 55 (123)
T cd02778 31 TLWINPETAARL--GIKDGDRVEVSSA 55 (123)
T ss_pred eEEECHHHHHHc--CCCCCCEEEEEeC
Confidence 456788899976 9999999999865
No 446
>TIGR01955 RfaH transcriptional activator RfaH. This model represents the transcriptional activator protein, RfaH. This protein is most closely related to the transcriptional termination/antitermination protein NusG (TIGR00922) and contains the KOW motif (pfam00467). This protein appears to be limited to the gamma proteobacteria. In E. coli, this gene appears to control the expression of haemolysin, sex factor and lipopolysaccharide genes.
Probab=40.54 E-value=33 Score=30.44 Aligned_cols=38 Identities=11% Similarity=-0.017 Sum_probs=30.6
Q ss_pred cceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 247 ESYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 247 ~~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
..|.+||.|||+.+-.. | -.|.|..++.++++.|.+.-
T Consensus 107 ~~~~~G~~V~V~~GPf~----------g--~~g~v~~~~~~~r~~v~l~~ 144 (159)
T TIGR01955 107 TLPYKGDKVRITDGAFA----------G--FEAIFLEPDGEKRSMLLLNM 144 (159)
T ss_pred cCCCCCCEEEEeccCCC----------C--cEEEEEEECCCceEEEEEhh
Confidence 46999999999986431 2 58999999999898887773
No 447
>cd04720 BAH_Orc1p_Yeast BAH, or Bromo Adjacent Homology domain, as present in Orc1p, which again is part of the Saccharomyces cerevisiae Sir1-origin recognition complex, and as present in Sir3p. The Orc1p BAH doman functions in epigenetic silencing. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=40.04 E-value=37 Score=31.42 Aligned_cols=45 Identities=24% Similarity=0.406 Sum_probs=33.8
Q ss_pred CccccceeeeccCCCCCcceEEEeeeCCCCc---EEEEecccccccccCCccc
Q 015234 194 GLAAGDWVRLKEEDRRHSPVGILHSIQRDGS---VAVGFLGLETLWKGHFSEL 243 (411)
Q Consensus 194 ~~~~gd~vr~~~~~~~~~~vg~~~~i~~~g~---~~~~~~~~~~~w~~~~~~~ 243 (411)
-|.+||-|-+|.++...-.||++|+|..+.. +. +.-.|=-.+.|+
T Consensus 52 ~~~vGD~Vlik~~~~~~~~V~iI~ei~~~~~~~~v~-----i~v~Wy~r~~Ei 99 (179)
T cd04720 52 ELSVGDTILVKDDVANSPSVYLIHEIRLNTLNNEVE-----LWVMWFLRWFEI 99 (179)
T ss_pred EEeCCCEEEEeCCCCCCCEEEEEEEEEeCCCCCEEE-----EEEEEcCCHHHc
Confidence 4789999999988778888999999987643 22 234566666666
No 448
>COG4890 Predicted outer membrane lipoprotein [Function unknown]
Probab=39.96 E-value=23 Score=24.09 Aligned_cols=22 Identities=23% Similarity=0.489 Sum_probs=17.7
Q ss_pred ccchh-hHHHHHHHHHHHhhhce
Q 015234 335 LHWAV-RPLFIALGLFTAMQMGF 356 (411)
Q Consensus 335 ~~~~~-~~~~~~~~~~~~~~~~~ 356 (411)
|-|-+ -||.+|+|+++||=+--
T Consensus 4 FaWiLG~lLAcAFgiinAlwlEh 26 (37)
T COG4890 4 FAWILGLLLACAFGIINALWLEH 26 (37)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55777 68999999999997643
No 449
>smart00739 KOW KOW (Kyprides, Ouzounis, Woese) motif. Motif in ribosomal proteins, NusG, Spt5p, KIN17 and T54.
Probab=39.59 E-value=43 Score=20.39 Aligned_cols=27 Identities=22% Similarity=0.334 Sum_probs=20.2
Q ss_pred ccccceeeeccCCCCCcceEEEeeeCCC
Q 015234 195 LAAGDWVRLKEEDRRHSPVGILHSIQRD 222 (411)
Q Consensus 195 ~~~gd~vr~~~~~~~~~~vg~~~~i~~~ 222 (411)
|+.||.|++... .-...+|+|-+|+++
T Consensus 2 ~~~G~~V~I~~G-~~~g~~g~i~~i~~~ 28 (28)
T smart00739 2 FEVGDTVRVIAG-PFKGKVGKVLEVDGE 28 (28)
T ss_pred CCCCCEEEEeEC-CCCCcEEEEEEEcCC
Confidence 678999999874 344558888888753
No 450
>PTZ00275 biotin-acetyl-CoA-carboxylase ligase; Provisional
Probab=39.03 E-value=37 Score=33.66 Aligned_cols=36 Identities=11% Similarity=0.120 Sum_probs=28.6
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.+..||.|++.. ++..-.|++..|++||.|+|..+.
T Consensus 233 ~~~~g~~V~v~~-------------~~~~~~G~~~gId~~G~L~i~~~~ 268 (285)
T PTZ00275 233 LLYKDKKVLIDQ-------------DNELIVGYLQGLLHDGSLLLLREK 268 (285)
T ss_pred hccCCCEEEEEe-------------CCCEEEEEEEEECCCCeEEEEeCC
Confidence 456899999853 122368999999999999999884
No 451
>TIGR00121 birA_ligase birA, biotin-[acetyl-CoA-carboxylase] ligase region. The protein name suggests that this enzyme transfers biotin only to acetyl-CoA-carboxylase but it also transfers the biotin moiety to other proteins. The apparent orthologs among the eukaryotes are larger proteins that contain a single copy of this domain.
Probab=38.50 E-value=38 Score=32.35 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=28.2
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.+..|+.|++..+ . ..-.|++..||+||.|+|...|
T Consensus 189 ~~~~g~~V~v~~~---------~----~~~~G~~~gI~~~G~L~v~~~~ 224 (237)
T TIGR00121 189 SAHIGREVSLTTG---------N----GEIEGIARGIDKDGALLLEDGG 224 (237)
T ss_pred hhccCCeEEEEeC---------C----cEEEEEEEeECCCceEEEEeCC
Confidence 4667999999632 1 1257999999999999999765
No 452
>PRK11886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; Provisional
Probab=38.50 E-value=45 Score=33.27 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=27.2
Q ss_pred eecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 249 YCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 249 ~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
+..|+.|++..+ +..-+|++..||+||.|+|...|
T Consensus 269 ~~~g~~v~~~~~-------------~~~~~G~~~gi~~~G~L~i~~~g 303 (319)
T PRK11886 269 LFLGREVKLIIG-------------DKEISGIARGIDEQGALLLEDDG 303 (319)
T ss_pred cccCCeEEEEeC-------------CcEEEEEEEEECCCceEEEEeCC
Confidence 567999988632 11258999999999999999665
No 453
>COG1162 Predicted GTPases [General function prediction only]
Probab=38.38 E-value=57 Score=32.84 Aligned_cols=62 Identities=27% Similarity=0.386 Sum_probs=37.6
Q ss_pred CCCCceEEeeeeCCCCceEEEEEEcCCCCCc---ccCchhhhhhhcCccccceeeeccCCCCCcceEEEeeeCC
Q 015234 151 DVPEGRVVGVEHNTEGESFVLVRVHGIHDPL---RVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQR 221 (411)
Q Consensus 151 ~~p~GtI~gid~~~d~Dg~llVr~~G~~d~~---r~~~s~lErv~~~~~~gd~vr~~~~~~~~~~vg~~~~i~~ 221 (411)
+...|.+.... .|+..|+.-...+-- ...-.-+.+......|||||.+.+.+.+ |+|+.|-.
T Consensus 3 ~~~~g~v~~~~-----~g~y~v~~~~~~~~~~~~~~~r~~lr~~~~~~vVGD~V~~~~~~~~----g~I~~i~~ 67 (301)
T COG1162 3 DLKRGRVVKVD-----AGFYGVRLEEEVDGEVYRCRARGNLRKKDLKPVVGDRVVFEDENNN----GVIEKILP 67 (301)
T ss_pred CccCcEEEEee-----CCEEEEEEccccccceeeeeeecceeccCccccccCeEEEecCCCc----ceEEEEec
Confidence 34566666666 377777766433211 1111223333467889999999877555 88887765
No 454
>cd02786 MopB_CT_3 The MopB_CT_3 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=38.15 E-value=30 Score=28.74 Aligned_cols=25 Identities=28% Similarity=0.425 Sum_probs=21.0
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||||+|...
T Consensus 32 ~v~i~p~dA~~l--gi~~Gd~V~v~s~ 56 (116)
T cd02786 32 TLLIHPADAAAR--GIADGDLVVVFND 56 (116)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 356788999977 9999999999854
No 455
>PRK06763 F0F1 ATP synthase subunit alpha; Validated
Probab=37.99 E-value=1.5e+02 Score=28.21 Aligned_cols=118 Identities=22% Similarity=0.332 Sum_probs=71.4
Q ss_pred CCceEEeeeeCCCCceEEEEEEcCCCCCcccCchhhhhhhcCccccceeeeccC--------------------------
Q 015234 153 PEGRVVGVEHNTEGESFVLVRVHGIHDPLRVHVSALERVTFGLAAGDWVRLKEE-------------------------- 206 (411)
Q Consensus 153 p~GtI~gid~~~d~Dg~llVr~~G~~d~~r~~~s~lErv~~~~~~gd~vr~~~~-------------------------- 206 (411)
-.|.+..++ ++.+.+.--+.-++.+.. ++ -...+++||-|++.-.
T Consensus 42 iEGrVvEV~-----~~~i~iesk~yn~~v~i~---~d-~~~nvKVGD~VKaTG~m~rnf~~ym~A~sVEk~~~~~G~h~~ 112 (213)
T PRK06763 42 IEGRVVEVD-----NGVIVIKSKQYEEPVSVY---ID-SLSNVKVGDEVKATGSMMRNFTEYMVATAVENTTNKLGMHMK 112 (213)
T ss_pred eeeEEEEEe-----CCEEEEEeccCCCceEEE---ec-CCCCcccCcEEEEchHHHHhhHHhhhhhhheeeccCcceeec
Confidence 467777777 466666666666664442 44 2357799999997621
Q ss_pred --CCCCcceEEEeeeCC---CC-----cEEEEecccccccccCCcccccccceecccEEEeeccccccccCCCCCCCCcc
Q 015234 207 --DRRHSPVGILHSIQR---DG-----SVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVSPQFEWPRKREGVW 276 (411)
Q Consensus 207 --~~~~~~vg~~~~i~~---~g-----~~~~~~~~~~~~w~~~~~~~~~~~~~~~g~~vr~~~~~~~pr~~w~~~~~~~~ 276 (411)
..--=-||-|-.+.. || .|.|-+++..+.=.-..=.|-.=..|.|||+|++.-.- -+|...... |
T Consensus 113 e~g~pdYvIG~Iskv~k~~~~~~~~~dyVvV~YP~~~G~~~~V~V~LT~GQkFnVGDkVKV~~~~----~~wg~~~~~-~ 187 (213)
T PRK06763 113 EDGSPDYVIGEVSKVYTMEDDGDGATKYVVVEYPSLNGKKLIIDVFLTKGQVFHVGDKVKVDMKY----VGWGGSSIN-W 187 (213)
T ss_pred ccCCcceEEEEEEEecccccCCCCcccEEEEEcCCCCCCeeEEEEEeccCCEEecCCEEEEEeee----ccccccCCC-c
Confidence 111123566666644 22 57788877665433333345566889999999998633 367665553 5
Q ss_pred ce-eEEEEE
Q 015234 277 AT-GRICMV 284 (411)
Q Consensus 277 ~~-g~i~~~ 284 (411)
++ +-|-.|
T Consensus 188 ~~~d~IeKI 196 (213)
T PRK06763 188 NTTDHIEKV 196 (213)
T ss_pred eeeCcchhh
Confidence 54 445554
No 456
>cd02790 MopB_CT_Formate-Dh_H Formate dehydrogenase H (Formate-Dh-H) catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons. It is a component of the anaerobic formate hydrogen lyase complex. The E. coli formate dehydrogenase H (Fdh-H) is a monomer composed of a single polypeptide chain with a Mo active site region and a [4Fe-4S] center. This CD (MopB_CT_Formate-Dh_H) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=37.76 E-value=25 Score=29.09 Aligned_cols=25 Identities=20% Similarity=0.448 Sum_probs=21.2
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....++.|+++. ||+-||||+|+.+
T Consensus 36 ~v~in~~dA~~l--gi~~Gd~V~v~~~ 60 (116)
T cd02790 36 YVEINPEDAKRL--GIEDGEKVRVSSR 60 (116)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 356788899876 9999999999876
No 457
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=37.33 E-value=57 Score=27.37 Aligned_cols=41 Identities=27% Similarity=0.408 Sum_probs=30.5
Q ss_pred ccceecccEEEeeccc------cccccCCCCCCCCccceeEEEEEecCCeEEEecC
Q 015234 246 AESYCVGQFVRLKANV------VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFP 295 (411)
Q Consensus 246 ~~~~~~g~~vr~~~~~------~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~ 295 (411)
...|++||.|.|+-+= -.||| || .||+|..+..+ +..|...
T Consensus 30 l~ey~~Gd~V~I~IdpSv~kGmPh~rf------~G--~TG~Vvg~~g~-ay~V~v~ 76 (98)
T COG2139 30 LQEYKVGDKVHIDIDPSVHKGMPHPRF------QG--KTGTVVGVRGR-AYKVEVY 76 (98)
T ss_pred HhhccCCCEEEEEeCcccccCCCCccc------cC--cceEEEeccCC-EEEEEEe
Confidence 4679999999998743 33444 45 79999999988 6666554
No 458
>cd02780 MopB_CT_Tetrathionate_Arsenate-R This CD contains the molybdopterin_binding C-terminal (MopB_CT) region of tetrathionate reductase, subunit A, (TtrA); respiratory arsenate As(V) reductase, catalytic subunit (ArrA); and other related proteins.
Probab=36.60 E-value=26 Score=30.59 Aligned_cols=25 Identities=24% Similarity=0.540 Sum_probs=21.3
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....++.+.++. ||+-||||+|+..
T Consensus 31 ~v~inp~dA~~l--gI~~Gd~V~v~s~ 55 (143)
T cd02780 31 PVWINPEDAAKL--GIKTGDRVRVVTP 55 (143)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEeC
Confidence 466788999977 9999999999865
No 459
>PRK02749 photosystem I reaction center subunit IV; Provisional
Probab=36.57 E-value=39 Score=26.52 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=26.5
Q ss_pred Cccccceeee-ccCCCCCcceEEEeeeCCCCcE
Q 015234 194 GLAAGDWVRL-KEEDRRHSPVGILHSIQRDGSV 225 (411)
Q Consensus 194 ~~~~gd~vr~-~~~~~~~~~vg~~~~i~~~g~~ 225 (411)
+++-||.||+ |+|+-=...||.|-||+.+|..
T Consensus 2 ~i~rGskVrIlR~ESYWyn~vGtV~svD~sgi~ 34 (71)
T PRK02749 2 AISRGDKVRILRPESYWYNEVGTVASVDKSGIK 34 (71)
T ss_pred ccccCCEEEEccccceeecCcceEEEEccCCCe
Confidence 5788999998 5777777789999999999843
No 460
>cd04508 TUDOR Tudor domains are found in many eukaryotic organisms and have been implicated in protein-protein interactions in which methylated protein substrates bind to these domains. For example, the Tudor domain of Survival of Motor Neuron (SMN) binds to symmetrically dimethylated arginines of arginine-glycine (RG) rich sequences found in the C-terminal tails of Sm proteins. The SMN protein is linked to spinal muscular atrophy. Another example is the tandem tudor domains of 53BP1, which bind to histone H4 specifically dimethylated at Lys20 (H4-K20me2). 53BP1 is a key transducer of the DNA damage checkpoint signal.
Probab=36.53 E-value=38 Score=23.53 Aligned_cols=23 Identities=26% Similarity=0.550 Sum_probs=21.2
Q ss_pred CccceeEEEEEecCCeEEEecCC
Q 015234 274 GVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 274 ~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
+.|-+++|..|++++...|.|-+
T Consensus 12 ~~wyra~V~~~~~~~~~~V~f~D 34 (48)
T cd04508 12 GKWYRAKITSILSDGKVEVFFVD 34 (48)
T ss_pred CeEEEEEEEEECCCCcEEEEEEc
Confidence 56999999999999999999986
No 461
>PF02941 FeThRed_A: Ferredoxin thioredoxin reductase variable alpha chain; InterPro: IPR004207 Ferredoxin thioredoxin reductase is a [4FE-4S] protein which plays an important role in the ferredoxin/thioredoxin regulatory chain. It converts an electron signal (photoreduced ferredoxin) to a thiol signal (reduced thioredoxin), regulating enzymes by reduction of specific disulphide groups. It catalyses the light-dependent activation of several photosynthetis enzymes. Ferredoxin thioredoxin reductase is a heterodimer of subunit a and subunit b. Subunit a is the variable subunit, and b is the catalytic chain. This family is the alpha chain.; GO: 0008937 ferredoxin-NAD(P) reductase activity, 0015979 photosynthesis, 0009536 plastid; PDB: 2PUK_B 2PVO_B 2PVG_B 1DJ7_B 2PVD_B 2PU9_B 2PUO_B.
Probab=35.93 E-value=18 Score=28.28 Aligned_cols=34 Identities=35% Similarity=0.525 Sum_probs=14.9
Q ss_pred cccEEEeeccccccccCCCCCCCCc----cceeEEEEEec
Q 015234 251 VGQFVRLKANVVSPQFEWPRKREGV----WATGRICMVVP 286 (411)
Q Consensus 251 ~g~~vr~~~~~~~pr~~w~~~~~~~----~~~g~i~~~~~ 286 (411)
||++||+|.+|+- |-=|.+++.+ -.-|.|.+|..
T Consensus 1 vGdrVrV~~sv~V--yh~P~hr~~~fDl~G~EGev~~~v~ 38 (67)
T PF02941_consen 1 VGDRVRVKASVVV--YHHPEHRNPPFDLKGMEGEVKQIVT 38 (67)
T ss_dssp TT-EEEE-S--EE--S--TTSTTS-EE-TT-EEEEEEE-S
T ss_pred CCCeEEEeeeEEE--EeCCcccCCCccccCCEEEEEEEEe
Confidence 7999999999862 1112222111 15678877763
No 462
>PF01568 Molydop_binding: Molydopterin dinucleotide binding domain; InterPro: IPR006657 A domain in this entry corresponds to the C-terminal domain IV in dimethyl sulphoxide (DMSO)reductase which interacts with the 2-amino pyrimidone ring of both molybdopterin guanine dinucleotide molecules [].; GO: 0016491 oxidoreductase activity, 0030151 molybdenum ion binding, 0055114 oxidation-reduction process; PDB: 2IVF_A 1OGY_G 3ML1_A 3O5A_A 1TI2_G 1VLE_M 1VLD_U 1VLF_O 1TI4_I 1TI6_E ....
Probab=35.93 E-value=14 Score=30.32 Aligned_cols=46 Identities=20% Similarity=0.336 Sum_probs=26.6
Q ss_pred CcccCchhhhhhhcCccccceeeeccCCCCCcceEEEeeeCC--CCcEEEEe
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSIQR--DGSVAVGF 229 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~~~~~~~vg~~~~i~~--~g~~~~~~ 229 (411)
....+|.++++. ||+-||||+|+.+.- +-.+.|+-=++ .|.|.+-+
T Consensus 31 ~v~inp~dA~~~--Gi~~Gd~V~v~s~~G--~v~~~v~~~~~v~~g~v~~~~ 78 (110)
T PF01568_consen 31 FVEINPEDAAKL--GIKDGDWVRVSSPRG--SVEVRVKVTDGVPPGVVFMPH 78 (110)
T ss_dssp EEEEEHHHHHHC--T--TTCEEEEEETTE--EEEEEEEEETTS-TTEEEEES
T ss_pred EEEEcHHHHHHh--cCcCCCEEEEEeccc--eEeeeeEEecCCcCCEEEEec
Confidence 345678888876 999999999986522 33444432221 44555444
No 463
>cd02785 MopB_CT_4 The MopB_CT_4 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=35.58 E-value=28 Score=29.50 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=20.7
Q ss_pred cccCchhhhhhhcCccccceeeeccC
Q 015234 181 LRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 181 ~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
...+|.++++. ||+-||||+|...
T Consensus 34 v~i~p~dA~~~--gi~~Gd~V~v~s~ 57 (124)
T cd02785 34 VKINPIDAAAR--GIAHGDLVEVYND 57 (124)
T ss_pred EEECHHHHHHc--CCCCCCEEEEEeC
Confidence 46789999977 9999999999865
No 464
>cd00508 MopB_CT_Fdh-Nap-like This CD includes formate dehydrogenases (Fdh) H and N; nitrate reductases, Nap and Nas; and other related proteins. Formate dehydrogenase H is a component of the anaerobic formate hydrogen lyase complex and catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons. Formate dehydrogenase N (alpha subunit) is the major electron donor to the bacterial nitrate respiratory chain and nitrate reductases, Nap and Nas, catalyze the reduction of nitrate to nitrite. This CD (MopB_CT_Fdh-Nap-like) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=35.45 E-value=29 Score=28.75 Aligned_cols=26 Identities=27% Similarity=0.515 Sum_probs=21.9
Q ss_pred CCcccCchhhhhhhcCccccceeeeccC
Q 015234 179 DPLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 179 d~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
.....+|.++++. ||+-||+|+|+.+
T Consensus 35 ~~v~inp~dA~~l--gi~~Gd~V~v~~~ 60 (120)
T cd00508 35 PFVEIHPEDAARL--GIKDGDLVRVSSR 60 (120)
T ss_pred CEEEECHHHHHHc--CCCCCCEEEEEeC
Confidence 3467788999976 9999999999865
No 465
>cd04721 BAH_plant_1 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=35.36 E-value=54 Score=28.69 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=0.0
Q ss_pred eecccEEEeeccccccccCCCCCCCCccceeEEEEEecC--CeEEEecCCCccCCccCccccccCCce
Q 015234 249 YCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPN--GCLIVRFPGRLTFGEQCSSFLADPAEV 314 (411)
Q Consensus 249 ~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~--g~l~~~~~~~~~~~~~~~~~~~d~~~~ 314 (411)
++|||+|-|| ..++.-.+|+|..|--| |..-|+.+ |+.-|.|+
T Consensus 8 i~vGD~V~v~------------~~~~~~~va~Ie~i~ed~~g~~~v~v~-----------WF~~p~E~ 52 (130)
T cd04721 8 ISVHDFVYVL------------SEEEDRYVAYIEDLYEDKKGSKMVKVR-----------WFHTTDEV 52 (130)
T ss_pred EECCCEEEEe------------CCCCCcEEEEEEEEEEcCCCCEEEEEE-----------EecCHHHh
No 466
>cd04370 BAH BAH, or Bromo Adjacent Homology domain (also called ELM1 and BAM for Bromo Adjacent Motif). BAH domains have first been described as domains found in the polybromo protein and Yeast Rsc1/Rsc2 (Remodeling of the Structure of Chromatin). They also occur in mammalian DNA methyltransferases and the MTA1 subunits of histone deacetylase complexes. A BAH domain is also found in Yeast Sir3p and in the origin receptor complex protein 1 (Orc1p), where it was found to interact with the N-terminal lobe of the silence information regulator 1 protein (Sir1p), confirming the initial hypothesis that BAH plays a role in protein-protein interactions.
Probab=33.58 E-value=47 Score=27.35 Aligned_cols=47 Identities=21% Similarity=0.270 Sum_probs=32.7
Q ss_pred CccccceeeeccCCC---CCcceEEEeeeCCC--CcEEEEecccccccccCCccccc
Q 015234 194 GLAAGDWVRLKEEDR---RHSPVGILHSIQRD--GSVAVGFLGLETLWKGHFSELQM 245 (411)
Q Consensus 194 ~~~~gd~vr~~~~~~---~~~~vg~~~~i~~~--g~~~~~~~~~~~~w~~~~~~~~~ 245 (411)
-+.+||.|-++.++. .+-.||.|.+|..+ |...| .-.|==.++|+..
T Consensus 3 ~y~vgd~V~v~~~~~~~~~~~~i~~I~~i~~~~~~~~~~-----~v~wf~rp~e~~~ 54 (123)
T cd04370 3 TYEVGDSVYVEPDDSIKSDPPYIARIEELWEDTNGSKQV-----KVRWFYRPEETPK 54 (123)
T ss_pred EEecCCEEEEecCCcCCCCCCEEEEEeeeeECCCCCEEE-----EEEEEEchhHhcc
Confidence 367899999998864 77889999999886 33322 3355555555543
No 467
>cd05764 Ig_2 Subgroup of the immunoglobulin (Ig) superfamily. Ig_2: subgroup of the immunoglobulin (Ig) domain found in the Ig superfamily. The Ig superfamily is a heterogenous group of proteins, built on a common fold comprised of a sandwich of two beta sheets. Members of the Ig superfamily are components of immunoglobulin, neuroglia, cell surface glycoproteins, such as T-cell receptors, CD2, CD4, CD8, and membrane glycoproteins, such as butyrophilin and chondroitin sulfate proteoglycan core protein. A predominant feature of most Ig domains is a disulfide bridge connecting the two beta-sheets with a tryptophan residue packed against the disulfide bond.
Probab=33.35 E-value=41 Score=25.21 Aligned_cols=43 Identities=21% Similarity=0.350 Sum_probs=24.8
Q ss_pred ccEEEeecccc---ccccCCCCCCCCccceeEEEEEecCCeEEEec
Q 015234 252 GQFVRLKANVV---SPQFEWPRKREGVWATGRICMVVPNGCLIVRF 294 (411)
Q Consensus 252 g~~vr~~~~~~---~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~ 294 (411)
||.|+|.+.+. .|.+.|-.+.+..-..+.-..+.++|.|+|.-
T Consensus 1 G~~~~l~C~~~g~P~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~ 46 (74)
T cd05764 1 GQRATLRCKARGDPEPAIHWISPDGKLISNSSRTLVYDNGTLDILI 46 (74)
T ss_pred CCeEEEEEEccCcCCCEEEEEeCCCEEecCCCeEEEecCCEEEEEE
Confidence 78888888543 47888864332211112224566778777753
No 468
>cd02779 MopB_CT_Arsenite-Ox This CD contains the molybdopterin_binding C-terminal (MopB_CT) region of Arsenite oxidase (Arsenite-Ox) and related proteins. Arsenite oxidase oxidizes arsenite to the less toxic arsenate; it transfers the electrons obtained from the oxidation of arsenite towards the soluble periplasmic electron carriers cytochrome c and/or amicyanin.
Probab=32.70 E-value=37 Score=28.42 Aligned_cols=24 Identities=29% Similarity=0.505 Sum_probs=20.6
Q ss_pred cccCchhhhhhhcCccccceeeeccC
Q 015234 181 LRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 181 ~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
...++.++++. ||+-||+|+|...
T Consensus 35 v~in~~dA~~l--gi~~Gd~V~v~s~ 58 (115)
T cd02779 35 IEVNPEDAKRE--GLKNGDLVEVYND 58 (115)
T ss_pred EEECHHHHHHc--CCCCCCEEEEEeC
Confidence 56788899977 9999999999765
No 469
>PF05257 CHAP: CHAP domain; InterPro: IPR007921 The CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain is a region between 110 and 140 amino acids that is found in proteins from bacteria, bacteriophages, archaea and eukaryotes of the Trypanosomidae family. Many of these proteins are uncharacterised, but it has been proposed that they may function mainly in peptidoglycan hydrolysis. The CHAP domain is found in a wide range of protein architectures; it is commonly associated with bacterial type SH3 domains and with several families of amidase domains. It has been suggested that CHAP domain containing proteins utilise a catalytic cysteine residue in a nucleophilic-attack mechanism [, ]. The CHAP domain contains two invariant residues, a cysteine and a histidine. These residues form part of the putative active site of CHAP domain containing proteins. Secondary structure predictions show that the CHAP domain belongs to the alpha + beta structural class, with the N-terminal half largely containing predicted alpha helices and the C-terminal half principally composed of predicted beta strands [, ]. Some proteins known to contain a CHAP domain are listed below: Bacterial and trypanosomal glutathionylspermidine amidases. A variety of bacterial autolysins. A Nocardia aerocolonigenes putative esterase. Streptococcus pneumoniae choline-binding protein D. Methanosarcina mazei protein MM2478, a putative chloride channel. Several phage-encoded peptidoglycan hydrolases. Cysteine peptidases belonging to MEROPS peptidase family C51 (D-alanyl-glycyl endopeptidase, clan CA). ; PDB: 2LRJ_A 2VPM_B 2VOB_B 2VPS_A 2K3A_A 2IO9_A 2IO8_A 2IOB_A 2IOA_B 2IO7_B ....
Probab=32.65 E-value=61 Score=27.40 Aligned_cols=43 Identities=23% Similarity=0.299 Sum_probs=29.7
Q ss_pred hhcCccccceeeec-cCCCCCcceEEEeeeCCCCcEEEEecccccccc
Q 015234 191 VTFGLAAGDWVRLK-EEDRRHSPVGILHSIQRDGSVAVGFLGLETLWK 237 (411)
Q Consensus 191 v~~~~~~gd~vr~~-~~~~~~~~vg~~~~i~~~g~~~~~~~~~~~~w~ 237 (411)
...-.++||-|-.. .......+||||.++..||++.+. |.+|.
T Consensus 59 ~~~~P~~Gdivv~~~~~~~~~GHVaIV~~v~~~~~i~v~----e~N~~ 102 (124)
T PF05257_consen 59 TGSTPQPGDIVVWDSGSGGGYGHVAIVESVNDGGTITVI----EQNWG 102 (124)
T ss_dssp ECS---TTEEEEEEECTTTTT-EEEEEEEE-TTSEEEEE----ECSST
T ss_pred cCcccccceEEEeccCCCCCCCeEEEEEEECCCCEEEEE----ECCcC
Confidence 44667899999884 447788899999999888888764 56664
No 470
>cd04717 BAH_polybromo BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional regulation. Saccharomyces cerevisiae RSC1 and RSC2 are part of the 15-subunit nucleosome remodeling RSC complex. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=32.60 E-value=29 Score=29.58 Aligned_cols=49 Identities=14% Similarity=0.082 Sum_probs=35.6
Q ss_pred CccccceeeeccCCC-CCcceEEEeeeCCCCcEEEEecccccccccCCccccc
Q 015234 194 GLAAGDWVRLKEEDR-RHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQM 245 (411)
Q Consensus 194 ~~~~gd~vr~~~~~~-~~~~vg~~~~i~~~g~~~~~~~~~~~~w~~~~~~~~~ 245 (411)
.+.+||+|.++.++. ..-.||.+.+|..|-. |.+-....|=-.++|...
T Consensus 3 ~~~vGD~V~v~~~~~~~~~~i~~I~~i~~~~~---g~~~~~~~Wf~rP~et~~ 52 (121)
T cd04717 3 QYRVGDCVYVANPEDPSKPIIFRIERLWKDED---GEKFFFGCWFYRPEETFH 52 (121)
T ss_pred EEECCCEEEEeCCCCCCCCEEEEEeEEEECCC---CCEEEEEEEEeChHHccC
Confidence 478999999998754 6677999999988632 223345677777777743
No 471
>PF02237 BPL_C: Biotin protein ligase C terminal domain; InterPro: IPR003142 This C-terminal domain has an SH3-like barrel fold, the function of which is unknown. It is found associated with prokaryotic bifunctional transcriptional repressors [] and eukaryotic enzymes involved in biotin utilization [, ]. In Escherichia coli the biotin operon repressor (BirA) is a bifunctional protein. BirA acts both as the acetyl-coA carboxylase biotin holoenzyme synthetase (6.3.4.15 from EC) and as the biotin operon repressor. DNA sequence analysis of mutations indicates that the helix-turn-helix DNA binding region is located at the N terminus while mutations affecting enzyme function, although mapping over a large region, are found mainly in the central part of the protein's primary sequence [].; GO: 0006464 protein modification process; PDB: 3RUX_A 2CGH_A 3L1A_B 3L2Z_A 1HXD_A 1BIB_A 2EWN_B 1BIA_A 2EJ9_A 3FJP_A ....
Probab=32.44 E-value=55 Score=23.36 Aligned_cols=33 Identities=30% Similarity=0.380 Sum_probs=25.8
Q ss_pred ccceeeeccCCCCCcceEEEeeeCCCCcEEEEecc
Q 015234 197 AGDWVRLKEEDRRHSPVGILHSIQRDGSVAVGFLG 231 (411)
Q Consensus 197 ~gd~vr~~~~~~~~~~vg~~~~i~~~g~~~~~~~~ 231 (411)
.|..|+++.++..- .|++..|+.||.|-|-.-.
T Consensus 2 lG~~V~v~~~~~~~--~G~~~gId~~G~L~v~~~~ 34 (48)
T PF02237_consen 2 LGQEVRVETGDGEI--EGIAEGIDDDGALLVRTED 34 (48)
T ss_dssp TTSEEEEEETSCEE--EEEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEECCeEE--EEEEEEECCCCEEEEEECC
Confidence 47788888743333 8999999999999997744
No 472
>cd04714 BAH_BAHCC1 BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=31.80 E-value=53 Score=28.20 Aligned_cols=46 Identities=26% Similarity=0.335 Sum_probs=32.3
Q ss_pred CccccceeeeccCCC-CCcceEEEeeeCCC--CcEEEEecccccccccCCcccc
Q 015234 194 GLAAGDWVRLKEEDR-RHSPVGILHSIQRD--GSVAVGFLGLETLWKGHFSELQ 244 (411)
Q Consensus 194 ~~~~gd~vr~~~~~~-~~~~vg~~~~i~~~--g~~~~~~~~~~~~w~~~~~~~~ 244 (411)
.+.+||+|.++.++. ..--||.|-+|-.| |...| ...|==.+.|..
T Consensus 3 ~~~vGD~V~v~~~~~~~~pyIgrI~~i~e~~~g~~~~-----~v~WfyrPeEt~ 51 (121)
T cd04714 3 IIRVGDCVLFKSPGRPSLPYVARIESLWEDPEGNMVV-----RVKWYYRPEETK 51 (121)
T ss_pred EEEcCCEEEEeCCCCCCCCEEEEEEEEEEcCCCCEEE-----EEEEEEcHHHcc
Confidence 578999999997654 55669999988764 54422 456766666654
No 473
>cd05707 S1_Rrp5_repeat_sc11 S1_Rrp5_repeat_sc11: Rrp5 is a trans-acting factor important for biogenesis of both the 40S and 60S eukaryotic ribosomal subunits. Rrp5 has two distinct regions, an N-terminal region containing tandemly repeated S1 RNA-binding domains (12 S1 repeats in Saccharomyces cerevisiae Rrp5 and 14 S1 repeats in Homo sapiens Rrp5) and a C-terminal region containing tetratricopeptide repeat (TPR) motifs thought to be involved in protein-protein interactions. Mutational studies have shown that each region represents a specific functional domain. Deletions within the S1-containing region inhibit pre-rRNA processing at either site A3 or A2, whereas deletions within the TPR region confer an inability to support cleavage of A0-A2. This CD includes S. cerevisiae S1 repeat 11 (sc11). Rrp5 is found in eukaryotes but not in prokaryotes or archaea.
Probab=31.74 E-value=46 Score=24.93 Aligned_cols=44 Identities=30% Similarity=0.406 Sum_probs=26.6
Q ss_pred eEEEeeeCCCCcEEEEecc-cccccccCCcccc------cccceecccEEEeec
Q 015234 213 VGILHSIQRDGSVAVGFLG-LETLWKGHFSELQ------MAESYCVGQFVRLKA 259 (411)
Q Consensus 213 vg~~~~i~~~g~~~~~~~~-~~~~w~~~~~~~~------~~~~~~~g~~vr~~~ 259 (411)
-|.|.+|.+.| +.|.+.+ .+.+. +.|+|. .-+.|.+||.|++|-
T Consensus 5 ~g~V~~v~~~G-v~V~l~~~~~G~v--~~s~l~~~~~~~~~~~~~~Gd~v~~~v 55 (68)
T cd05707 5 RGFVKNIANNG-VFVTLGRGVDARV--RVSELSDSYLKDWKKRFKVGQLVKGKI 55 (68)
T ss_pred EEEEEEEECcc-EEEEeCCCCEEEE--EHHHCCchhhcCHhhccCCCCEEEEEE
Confidence 37788888765 7777753 33333 223331 123499999998864
No 474
>cd02788 MopB_CT_NDH-1_NuoG2-N7 MopB_CT_NDH-1_NuoG2-N7: C-terminal region of the NuoG-like subunit (of the variant with a [4Fe-4S] cluster, N7) of the NADH-quinone oxidoreductase/NADH dehydrogenase-1 (NDH-1) found in various bacteria. The NDH-1 is the first energy-transducting complex in the respiratory chain and functions as a redox pump that uses the redox energy to translocate H+ ions across the membrane, resulting in a significant contribution to energy production. In Escherichia coli NDH-1, the largest subunit is encoded by the nuoG gene, and is part of the 14 distinct subunits constituting the functional enzyme. The NuoG subunit is made of two domains: the first contains three binding sites for FeS clusters (the fer2 domain), the second domain, is of unknown function or, as postulated, has lost an ancestral formate dehydrogenase activity that became redundant during the evolution of the complex I enzyme. Unique to this group, compared to the other prokaryotic and eukaryotic groups
Probab=31.63 E-value=40 Score=27.46 Aligned_cols=58 Identities=24% Similarity=0.245 Sum_probs=33.7
Q ss_pred CcccCchhhhhhhcCccccceeeeccCCCCCcceEEEeee--CCCCcEEEEecccccccccCCcccc
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEEDRRHSPVGILHSI--QRDGSVAVGFLGLETLWKGHFSELQ 244 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~~~~~~~vg~~~~i--~~~g~~~~~~~~~~~~w~~~~~~~~ 244 (411)
....+|.++++. ||+-||+|+|+... .+-.+.++-- -+.|.|.+-+ | ..+.+.++..+
T Consensus 30 ~v~inp~dA~~l--Gi~~Gd~V~v~s~~--G~i~~~v~v~~~v~~g~V~~p~-g--~~~~~~~~~~~ 89 (96)
T cd02788 30 YARLSPADAARL--GLADGDLVEFSLGD--GTLTLPVQISKYLPAGVVGLPL-G--AGFPGAPVAEQ 89 (96)
T ss_pred EEEECHHHHHHc--CCCCCCEEEEEECC--eEEEEEEEECCCCCCCEEEEec-C--CCCcccccchh
Confidence 356688899976 99999999998552 1222333211 1255666655 3 23444444433
No 475
>PF10246 MRP-S35: Mitochondrial ribosomal protein MRP-S35; InterPro: IPR019375 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This is a family of short mitochondrial ribosomal proteins, less than 200 amino acids long. MRP-S35 was proposed as a more appropriate name to this group of proteins [].
Probab=31.57 E-value=71 Score=27.14 Aligned_cols=55 Identities=22% Similarity=0.342 Sum_probs=33.9
Q ss_pred CCCcceEEEeeeCCCCcEEEEecccccccccCCcccc-cccceecccEEEeec--ccccccc
Q 015234 208 RRHSPVGILHSIQRDGSVAVGFLGLETLWKGHFSELQ-MAESYCVGQFVRLKA--NVVSPQF 266 (411)
Q Consensus 208 ~~~~~vg~~~~i~~~g~~~~~~~~~~~~w~~~~~~~~-~~~~~~~g~~vr~~~--~~~~pr~ 266 (411)
..+-=+|.+-.|-.| .|+|.| | ....+.|..=+ ..+.|..|.+|||.. -=.|-||
T Consensus 23 ~gk~V~G~I~hvv~d-dLYIDf-G--~KFhcVc~rp~~~~~~y~~G~rV~lrLkdlELs~~F 80 (104)
T PF10246_consen 23 EGKIVIGKIFHVVDD-DLYIDF-G--GKFHCVCKRPAVNGEKYVRGSRVRLRLKDLELSAHF 80 (104)
T ss_pred cCCEEEEEEEEEecC-ceEEEe-C--CceeEEEecccccccccccCCEEEEEECCHhhhhhh
Confidence 344457777777666 799999 5 22333333322 457799999998764 3344444
No 476
>PRK08559 nusG transcription antitermination protein NusG; Validated
Probab=30.97 E-value=83 Score=28.18 Aligned_cols=50 Identities=16% Similarity=0.134 Sum_probs=34.8
Q ss_pred cCccccceeeeccCCCCCcceEEEeeeC-CCCcEEEEecccccc--cccCCccc
Q 015234 193 FGLAAGDWVRLKEEDRRHSPVGILHSIQ-RDGSVAVGFLGLETL--WKGHFSEL 243 (411)
Q Consensus 193 ~~~~~gd~vr~~~~~~~~~~vg~~~~i~-~~g~~~~~~~~~~~~--w~~~~~~~ 243 (411)
.+|.+|||||+++.... .-.|+|-+++ +.+.+.|.++|.+.. =+=+.++|
T Consensus 93 ~~~~~G~~V~I~~Gpf~-g~~g~V~~vd~~k~~v~v~ll~~~~~~pv~v~~~~~ 145 (153)
T PRK08559 93 EGIKEGDIVELIAGPFK-GEKARVVRVDESKEEVTVELLEAAVPIPVTVRGDQV 145 (153)
T ss_pred cCCCCCCEEEEeccCCC-CceEEEEEEcCCCCEEEEEEECCcceeeEEEeccEE
Confidence 46999999999986333 3478888886 467788888887655 44344444
No 477
>cd05852 Ig5_Contactin-1 Fifth Ig domain of contactin-1. Ig5_Contactin-1: fifth Ig domain of the neural cell adhesion molecule contactin-1. Contactins are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. Contactin-1 is differentially expressed in tumor tissues and may through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.
Probab=30.32 E-value=43 Score=25.74 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=24.9
Q ss_pred ccEEEeeccc---cccccCCCCCCCCccceeEEEEEecCCeEEEecC
Q 015234 252 GQFVRLKANV---VSPQFEWPRKREGVWATGRICMVVPNGCLIVRFP 295 (411)
Q Consensus 252 g~~vr~~~~~---~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~ 295 (411)
|+.|+|.+.+ -.|.+.|-....-....+++ .|.+||.|+|.-.
T Consensus 1 G~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~r~-~~~~~g~L~I~~v 46 (73)
T cd05852 1 GGRVIIECKPKAAPKPKFSWSKGTELLVNNSRI-SIWDDGSLEILNI 46 (73)
T ss_pred CCeEEEEEecceeCCCEEEEEeCCEecccCCCE-EEcCCCEEEECcC
Confidence 5677777743 35778897543211222343 4567888877655
No 478
>cd02782 MopB_CT_1 The MopB_CT_1 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. This CD is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=30.25 E-value=1.1e+02 Score=25.95 Aligned_cols=25 Identities=40% Similarity=0.627 Sum_probs=20.6
Q ss_pred CcccCchhhhhhhcCccccceeeeccC
Q 015234 180 PLRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 180 ~~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
....+|.++++. ||+-||||+|+..
T Consensus 34 ~v~i~p~dA~~~--gi~~Gd~V~v~s~ 58 (129)
T cd02782 34 TLRIHPDDAAAL--GLADGDKVRVTSA 58 (129)
T ss_pred eEEECHHHHHHc--CCCCCCEEEEEcC
Confidence 356688888876 9999999999865
No 479
>PF14001 YdfZ: YdfZ protein
Probab=29.91 E-value=54 Score=25.38 Aligned_cols=27 Identities=26% Similarity=0.320 Sum_probs=20.9
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCe
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGC 289 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~ 289 (411)
++..|++|.+-. ++ .+|+|++|+.||.
T Consensus 9 ~i~~G~rVMiag------------tG---~~gvikAih~~gl 35 (64)
T PF14001_consen 9 AITTGSRVMIAG------------TG---ATGVIKAIHADGL 35 (64)
T ss_pred cCCCCCEEEEcC------------CC---cccEEeeeecCCC
Confidence 467888888743 33 6999999999974
No 480
>PF14326 DUF4384: Domain of unknown function (DUF4384)
Probab=29.35 E-value=90 Score=24.74 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=28.4
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.|++|+.|+|+-....| .-=.|-.||+||++..=||-
T Consensus 2 ~~~~Ge~v~~~~~~~~~------------~Yl~l~~~~~~G~v~~L~Pn 38 (83)
T PF14326_consen 2 VYRVGERVRFRVTSNRD------------GYLYLFYIDADGKVTLLFPN 38 (83)
T ss_pred cccCCCEEEEEEEeCCC------------eEEEEEEECCCCCEEEEecC
Confidence 48899999998766322 24578888999999888885
No 481
>PF11623 DUF3252: Protein of unknown function (DUF3252); InterPro: IPR021659 This family of proteins has no known function. Some members are annotated as Ssl0352 however this cannot be confirmed. Currently there is no known function. ; PDB: 3C4S_B 2JZ2_A.
Probab=29.22 E-value=90 Score=23.22 Aligned_cols=42 Identities=29% Similarity=0.407 Sum_probs=27.4
Q ss_pred CccccceeeeccC-CCCCcceEEEeeeCCCCcEEEEeccccccccc
Q 015234 194 GLAAGDWVRLKEE-DRRHSPVGILHSIQRDGSVAVGFLGLETLWKG 238 (411)
Q Consensus 194 ~~~~gd~vr~~~~-~~~~~~vg~~~~i~~~g~~~~~~~~~~~~w~~ 238 (411)
+|-.|--||+++. +.-..--|+|+.|.+ |.++|=|=| .+|.-
T Consensus 1 ~ilPG~~V~V~n~~~~Y~~y~G~VQRvsd-gkaaVLFEG--GnWdK 43 (53)
T PF11623_consen 1 MILPGSTVRVKNPNDIYYGYEGFVQRVSD-GKAAVLFEG--GNWDK 43 (53)
T ss_dssp ---TT-EEEE--TTSTTTT-EEEEEEEET-TEEEEEEEE--TTEEE
T ss_pred CccCCCEEEEeCCCCccchheEEEEEeeC-CeEEEEecC--CCceE
Confidence 3557888999854 778888999999975 577777755 78853
No 482
>cd02776 MopB_CT_Nitrate-R-NarG-like Respiratory nitrate reductase A (NarGHI), alpha chain (NarG) and related proteins. Under anaerobic conditions in the presence of nitrate, E. coli synthesizes the cytoplasmic membrane-bound quinol-nitrate oxidoreductase (NarGHI), which reduces nitrate to nitrite and forms part of a redox loop generating a proton-motive force. Found in prokaryotes and some archaea, NarGHI usually functions as a heterotrimer. The alpha chain contains the molybdenum cofactor-containing Mo-bisMGD catalytic subunit. This CD (MopB_CT_Nitrate-R-NarG-like) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs.
Probab=28.93 E-value=44 Score=29.47 Aligned_cols=24 Identities=17% Similarity=0.500 Sum_probs=20.3
Q ss_pred cccCchhhhhhhcCccccceeeeccC
Q 015234 181 LRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 181 ~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
...+|.++++. ||+-||||+|...
T Consensus 33 v~inp~dA~~l--gI~dGd~V~v~~~ 56 (141)
T cd02776 33 VWMNPKDAAEL--GIKDNDWVEVFND 56 (141)
T ss_pred EEECHHHHHHc--CCCCCCEEEEEeC
Confidence 45788898866 9999999999865
No 483
>PRK12696 flgH flagellar basal body L-ring protein; Reviewed
Probab=28.71 E-value=57 Score=31.68 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=26.4
Q ss_pred ceeEEEEEecCCeEEEecCCCccCCccCccccccCCceeEEee
Q 015234 277 ATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTF 319 (411)
Q Consensus 277 ~~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~~~~ 319 (411)
-+.+|..|+|||-|+|. ++.|+.-=-|.|.+.+
T Consensus 152 Ita~V~~VLPNGNLvI~----------G~k~v~vN~e~~~i~l 184 (236)
T PRK12696 152 IAARVVRVLPGGLMQVE----------GARETRVNDETQYIVV 184 (236)
T ss_pred EEEEEEEECCCCCEEEE----------EEEEEEECCCEEEEEE
Confidence 35678899999999995 3467888888888874
No 484
>PF04319 NifZ: NifZ domain; InterPro: IPR007415 NifZ is a short protein is found in the nif (nitrogen fixation) operon. It is required for the maturation of the nitrogenase MoFe protein. In the absence of NifZ, only one of the two P-clusters of the MoFe protein is matured to the ultimate [8Fe-7S] structure. The other P-cluster site in the protein contains a [4Fe-4S] cluster pair, suggesting that NifZ is specifically required for the formation of the second P-cluster [, , ].; GO: 0009399 nitrogen fixation
Probab=28.37 E-value=46 Score=26.62 Aligned_cols=39 Identities=33% Similarity=0.341 Sum_probs=27.9
Q ss_pred cCccccceeeeccC---------------CCCCcceEEEeeeCC---CCcE-EEEecc
Q 015234 193 FGLAAGDWVRLKEE---------------DRRHSPVGILHSIQR---DGSV-AVGFLG 231 (411)
Q Consensus 193 ~~~~~gd~vr~~~~---------------~~~~~~vg~~~~i~~---~g~~-~~~~~~ 231 (411)
.-|..||.||.... -.+...+|.|.+|+. +-.+ .|-|.+
T Consensus 3 p~f~~G~~V~a~~~irNDGt~Pg~~~g~lLv~~G~~G~V~~iG~flq~~~IY~V~F~~ 60 (75)
T PF04319_consen 3 PRFEWGDKVRARKDIRNDGTFPGKEIGELLVRKGDVGYVVSIGTFLQDFYIYLVHFLE 60 (75)
T ss_pred CccCCCCEEEEEEEeEcCCCCCCCCCCCEEEcCCCcEEEEEeeEEcceeEEEEEEEcC
Confidence 35889999997543 467889999999987 3344 366644
No 485
>cd04455 S1_NusA S1_NusA: N-utilizing substance A protein (NusA), S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. NusA is a transcription elongation factor containing an N-terminal catalytic domain and three RNA binding domains (RBD's). The RBD's include one S1 domain and two KH domains that form an RNA binding surface. DNA transcription by RNA polymerase (RNAP) includes three phases - initiation, elongation, and termination. During initiation, sigma factors bind RNAP and target RNAP to specific promoters. During elongation, N-utilization substances (NusA, B, E, and G) replace sigma factors and regulate pausing, termination, and antitermination. NusA is cold-shock-inducible.
Probab=28.36 E-value=72 Score=24.08 Aligned_cols=44 Identities=25% Similarity=0.245 Sum_probs=27.4
Q ss_pred eEEEeeeCCCCcEEEEecccccccccCCcccccccceecccEEEeec
Q 015234 213 VGILHSIQRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKA 259 (411)
Q Consensus 213 vg~~~~i~~~g~~~~~~~~~~~~w~~~~~~~~~~~~~~~g~~vr~~~ 259 (411)
-|.|.++..+| +.|.. |. .-=--+.+|+-.-+.|++||.|.+.-
T Consensus 8 ~G~V~~~~~~~-~~vdi-g~-~eg~lp~~e~~~~~~~~~Gd~v~v~v 51 (67)
T cd04455 8 TGIVKRVDRGN-VIVDL-GK-VEAILPKKEQIPGESYRPGDRIKAYV 51 (67)
T ss_pred EEEEEEEcCCC-EEEEc-CC-eEEEeeHHHCCCCCcCCCCCEEEEEE
Confidence 38889998875 55665 32 11112344554446789999998875
No 486
>COG5235 RFA2 Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit [DNA replication, recombination, and repair]
Probab=28.25 E-value=73 Score=30.54 Aligned_cols=36 Identities=22% Similarity=0.494 Sum_probs=30.0
Q ss_pred CCcEEEEecccccccccCCcccccccceecccEEEeeccccc
Q 015234 222 DGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKANVVS 263 (411)
Q Consensus 222 ~g~~~~~~~~~~~~w~~~~~~~~~~~~~~~g~~vr~~~~~~~ 263 (411)
.|++.|-| |.|+..++|.+.-..-|-.|||-.++++
T Consensus 93 TG~Ievr~------W~~~~~~~e~~~d~~~~~yvkV~G~lk~ 128 (258)
T COG5235 93 TGSIEVRF------WPGNSYEEEQCKDLEEQNYVKVNGSLKT 128 (258)
T ss_pred CceEEEEe------cCCCchHHHhccccccccEEEEecceee
Confidence 56666654 9999999999999999999998877764
No 487
>cd02775 MopB_CT Molybdopterin-Binding, C-terminal (MopB_CT) domain of the MopB superfamily of proteins, a large, diverse, heterogeneous superfamily of enzymes that, in general, bind molybdopterin as a cofactor. The MopB domain is found in a wide variety of molybdenum- and tungsten-containing enzymes, including formate dehydrogenase-H (Fdh-H) and -N (Fdh-N), several forms of nitrate reductase (Nap, Nas, NarG), dimethylsulfoxide reductase (DMSOR), thiosulfate reductase, formylmethanofuran dehydrogenase, and arsenite oxidase. Molybdenum is present in most of these enzymes in the form of molybdopterin, a modified pterin ring with a dithiolene side chain, which is responsible for ligating the Mo. In many bacterial and archaeal species, molybdopterin is in the form of a dinucleotide, with two molybdopterin dinucleotide units per molybdenum. These proteins can function as monomers, heterodimers, or heterotrimers, depending on the protein and organism. Also included in the MopB superfamily is
Probab=28.20 E-value=46 Score=26.55 Aligned_cols=27 Identities=19% Similarity=0.406 Sum_probs=21.9
Q ss_pred CCcccCchhhhhhhcCccccceeeeccCC
Q 015234 179 DPLRVHVSALERVTFGLAAGDWVRLKEED 207 (411)
Q Consensus 179 d~~r~~~s~lErv~~~~~~gd~vr~~~~~ 207 (411)
.....++.++++. ||..||+|+++...
T Consensus 23 ~~v~~~~~da~~l--gl~~Gd~v~v~~~~ 49 (101)
T cd02775 23 PVVEINPEDAAAL--GIKDGDLVRVESRR 49 (101)
T ss_pred CEEEECHHHHHHc--CCCCCCEEEEEcCC
Confidence 3567788888866 99999999998653
No 488
>PF02107 FlgH: Flagellar L-ring protein; InterPro: IPR000527 The flgH, flgI and fliF genes of Salmonella typhimurium encode the major proteins for the L, P and M rings of the flagellar basal body []. In fact, the basal body consists of four rings (L,P,S and M) surrounding the flagellar rod, which is believed to transmit motor rotation to the filament []. The M ring is integral to the inner membrane of the cell, and may be connected to the rod via the S (supramembrane) ring, which lies just distal to it. The L and P rings reside in the outer membrane and periplasmic space, respectively. FlgH and FlgI, which are exported across the cell membrane to their destinations in the outer membrane and periplasmic space, have typical N-terminal cleaved signal-peptide sequences. FlgH is predicted to have an extensive beta-sheet structure, in keeping with other outer membrane proteins [].; GO: 0003774 motor activity, 0001539 ciliary or flagellar motility, 0009427 bacterial-type flagellum basal body, distal rod, L ring
Probab=28.17 E-value=48 Score=30.63 Aligned_cols=32 Identities=25% Similarity=0.416 Sum_probs=23.7
Q ss_pred ceeEEEEEecCCeEEEecCCCccCCccCccccccCCceeEEe
Q 015234 277 ATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVT 318 (411)
Q Consensus 277 ~~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~~~ 318 (411)
-+.+|..|+|||-|+|. ++.++.-=.|.|.+.
T Consensus 96 ita~Vv~VlpNGnL~I~----------G~k~i~vn~e~~~i~ 127 (179)
T PF02107_consen 96 ITARVVEVLPNGNLVIE----------GEKQIRVNGEEQYIR 127 (179)
T ss_pred EEEEEEEECCCCcEEEE----------EEEEEEECCCEEEEE
Confidence 46789999999999995 234566666666665
No 489
>PRK06955 biotin--protein ligase; Provisional
Probab=28.01 E-value=50 Score=32.92 Aligned_cols=37 Identities=22% Similarity=0.214 Sum_probs=28.3
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.+..||.|++... . +..-.|++..|++||.|+|++++
T Consensus 245 ~~~~g~~V~v~~~---------~---~~~~~G~~~gId~~G~L~v~~~~ 281 (300)
T PRK06955 245 HAYAGREVVLLED---------G---AELARGVAHGIDETGQLLLDTPA 281 (300)
T ss_pred hhcCCCeEEEEEC---------C---CcEEEEEEeeECCCceEEEEeCC
Confidence 4678999988431 0 11248999999999999999996
No 490
>TIGR02768 TraA_Ti Ti-type conjugative transfer relaxase TraA. This protein contains domains distinctive of a single strand exonuclease (N-terminus, MobA/MobL, pfam03389) as well as a helicase domain (central region, homologous to the corresponding region of the F-type relaxase TraI, TIGR02760). This protein likely fills the same role as TraI(F), nicking (at the oriT site) and unwinding the coiled plasmid prior to conjugative transfer.
Probab=27.85 E-value=83 Score=35.55 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=32.2
Q ss_pred ceecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCC
Q 015234 248 SYCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPG 296 (411)
Q Consensus 248 ~~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~ 296 (411)
.|++||+|++..|- +.-+ -..| .+|+|..|+. +.++|.|++
T Consensus 607 ~~~~GDrV~~~~N~--~~~g---v~NG--d~g~V~~i~~-~~i~v~~~~ 647 (744)
T TIGR02768 607 KFAAGDRIVFLENN--RDLG---VKNG--MLGTVEEIED-GRLVVQLDS 647 (744)
T ss_pred eecCCCEEEEEecc--cccC---CcCC--CEEEEEEecC-CeEEEEECC
Confidence 69999999999984 3333 2345 8999999985 589999985
No 491
>smart00439 BAH Bromo adjacent homology domain.
Probab=27.71 E-value=56 Score=27.00 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=23.4
Q ss_pred ccccceeeeccCC-CCCcceEEEeeeCC
Q 015234 195 LAAGDWVRLKEED-RRHSPVGILHSIQR 221 (411)
Q Consensus 195 ~~~gd~vr~~~~~-~~~~~vg~~~~i~~ 221 (411)
|.+||.|.++.++ ..+-.||.|++|-.
T Consensus 2 ~~vgd~V~v~~~~~~~~~~i~~I~~i~~ 29 (120)
T smart00439 2 IRVGDFVLVEPDDADEPYYIGRIEEIFE 29 (120)
T ss_pred cccCCEEEEeCCCCCCCCEEEEEEEEEE
Confidence 6799999999886 56788999999977
No 492
>PF05641 Agenet: Agenet domain; InterPro: IPR008395 This domain is related to the TUDOR domain IPR008191 from INTERPRO []. The function of the agenet domain is unknown. This signature matches one of the two Agenet domains in the FMR proteins [].; GO: 0003723 RNA binding; PDB: 2BKD_N 3O8V_A 3KUF_A 3H8Z_A.
Probab=27.68 E-value=1.1e+02 Score=23.45 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=28.0
Q ss_pred eecccEEEeeccccccccCCCCCCCCccceeEEEEEecCCeEEEecCCCcc
Q 015234 249 YCVGQFVRLKANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLT 299 (411)
Q Consensus 249 ~~~g~~vr~~~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~~~~ 299 (411)
|++|+.|-|+...- .-+|+|-.++|.....++...|.|-....
T Consensus 1 F~~G~~VEV~s~e~--------g~~gaWf~a~V~~~~~~~~~~V~Y~~~~~ 43 (68)
T PF05641_consen 1 FKKGDEVEVSSDED--------GFRGAWFPATVLKENGDDKYLVEYDDLPD 43 (68)
T ss_dssp --TT-EEEEEE-SB--------TT--EEEEEEEEEEETT-EEEEEETT-SS
T ss_pred CCCCCEEEEEEcCC--------CCCcEEEEEEEEEeCCCcEEEEEECCccc
Confidence 57899998875321 22568999999999999999999986443
No 493
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=27.68 E-value=8.5 Score=40.22 Aligned_cols=76 Identities=21% Similarity=0.364 Sum_probs=39.7
Q ss_pred ccccccccCCCCCCCCccceeEEEEEecCCeEEEecCCCccCCccCccccccCCceeE-Eeec-CCch--h--hhhhhhc
Q 015234 259 ANVVSPQFEWPRKREGVWATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEV-VTFN-TCPG--M--VKKYQHL 332 (411)
Q Consensus 259 ~~~~~pr~~w~~~~~~~~~~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~-~~~~-~~~~--~--~~~~~~~ 332 (411)
.+=.-++|.|+..+.- .--|...-=..|=. -|++|=.+.+| ..-|++||+||+. .... ++.- . +++|.|+
T Consensus 300 ~s~~f~~yD~G~~~N~-~~Y~q~~pP~Y~l~-~i~~P~~l~~g--~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHl 375 (403)
T KOG2624|consen 300 RSGKFRKYDYGSKRNL-KHYGQSTPPEYDLT-NIKVPTALYYG--DNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHL 375 (403)
T ss_pred cCCCccccCCCccccH-hhcCCCCCCCCCcc-ccccCEEEEec--CCcccCCHHHHHHHHHhcccccccccccCCCccce
Confidence 3445577888876321 12222111111100 11455444433 3459999999992 2211 2211 1 5899998
Q ss_pred ccccchh
Q 015234 333 EDLHWAV 339 (411)
Q Consensus 333 ~~~~~~~ 339 (411)
||-|+.
T Consensus 376 -DFi~g~ 381 (403)
T KOG2624|consen 376 -DFIWGL 381 (403)
T ss_pred -eeeecc
Confidence 788987
No 494
>PRK12697 flgH flagellar basal body L-ring protein; Reviewed
Probab=27.60 E-value=62 Score=31.26 Aligned_cols=32 Identities=31% Similarity=0.360 Sum_probs=26.3
Q ss_pred eeEEEEEecCCeEEEecCCCccCCccCccccccCCceeEEee
Q 015234 278 TGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTF 319 (411)
Q Consensus 278 ~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~~~~ 319 (411)
+.+|..|+|||-|+|. ++.|+.-=.|.|.+.+
T Consensus 143 tv~V~~VlpNGnL~I~----------GeK~i~vN~e~e~Irl 174 (226)
T PRK12697 143 TVTVTNVLPNGNLVVS----------GEKQMLINQGNEFVRF 174 (226)
T ss_pred EEEEEEECCCCCEEEE----------EEEEEEECCCEEEEEE
Confidence 4588999999999995 3468888888888884
No 495
>TIGR03689 pup_AAA proteasome ATPase. In the Actinobacteria, as shown for Mycobacterium tuberculosis, some proteins are modified by ligation between an epsilon-amino group of a lysine side chain and the C-terminal carboxylate of the ubiquitin-like protein Pup. This modification leads to protein degradation by the archaeal-like proteasome found in the Actinobacteria. Members of this protein family belong to the AAA family of ATPases and tend to be clustered with the genes for Pup, the Pup ligase PafA, and structural components of the proteasome. This protein forms hexameric rings with ATPase activity.
Probab=27.59 E-value=1.8e+02 Score=31.47 Aligned_cols=83 Identities=22% Similarity=0.164 Sum_probs=57.3
Q ss_pred CCCCcceEEEeee-CCCCcEEEEecccccccccCCcccccccceecccEEEeec--cccccccCCCCCCCCccceeEEEE
Q 015234 207 DRRHSPVGILHSI-QRDGSVAVGFLGLETLWKGHFSELQMAESYCVGQFVRLKA--NVVSPQFEWPRKREGVWATGRICM 283 (411)
Q Consensus 207 ~~~~~~vg~~~~i-~~~g~~~~~~~~~~~~w~~~~~~~~~~~~~~~g~~vr~~~--~~~~pr~~w~~~~~~~~~~g~i~~ 283 (411)
..-++.+|++=.. ..+|++.|..-|....=. .|-.-.+..+.+||.|+|-. +|+.. .+-. ..| ...+|..
T Consensus 42 ~~p~~~~~~~~~~~~~~~~~~v~~~g~~~~~~--~~~~~~~~~l~~g~~v~l~e~~~~v~~-~~~~--~~g--~~~~~~~ 114 (512)
T TIGR03689 42 AQPPSTYGTFLQTAIDDETAEVFTAGRRMRVT--VSPNVNAAELVPGQTVRLNEALQVVEA-RDFE--TVG--EIATLKE 114 (512)
T ss_pred cCCCcceEEEEEeccCCCeEEEEeCCceEEEE--eCCCCCHHHCCCCCEEEECCcceeecc-CCCC--CCC--ceEEEEE
Confidence 7789999999988 788899996666544432 23334457799999999986 34332 2222 122 3557777
Q ss_pred EecCCeEEEecCC
Q 015234 284 VVPNGCLIVRFPG 296 (411)
Q Consensus 284 ~~~~g~l~~~~~~ 296 (411)
+..+++++|...+
T Consensus 115 ~~~~~~~~v~~~~ 127 (512)
T TIGR03689 115 VLGDGRALVVDHS 127 (512)
T ss_pred EeCCCeEEEEeCC
Confidence 7888999998875
No 496
>PRK09014 rfaH transcriptional activator RfaH; Provisional
Probab=27.50 E-value=59 Score=29.04 Aligned_cols=50 Identities=12% Similarity=0.108 Sum_probs=35.2
Q ss_pred CccccceeeeccCCCCCcceEEEeeeCCCCc--EEEEecccccccccCCcccc
Q 015234 194 GLAAGDWVRLKEEDRRHSPVGILHSIQRDGS--VAVGFLGLETLWKGHFSELQ 244 (411)
Q Consensus 194 ~~~~gd~vr~~~~~~~~~~vg~~~~i~~~g~--~~~~~~~~~~~w~~~~~~~~ 244 (411)
.|.+||.||+.+.. -.+-.|+|-.++.... |.+.++|.++.=.=+.++|+
T Consensus 109 ~~~~G~~V~I~~Gp-~~g~eg~v~~~~~~~r~~v~v~~~gr~~~v~v~~~~~~ 160 (162)
T PRK09014 109 TPKPGDKVIITEGA-FEGLQAIYTEPDGEARSILLLNLLNKQVKHSVDNTQFR 160 (162)
T ss_pred CCCCCCEEEEecCC-CCCcEEEEEEeCCCeEEEEeehhhCCcEEEEECHHHee
Confidence 47899999998763 3456799998886666 55667777766555555554
No 497
>PRK12699 flgH flagellar basal body L-ring protein; Reviewed
Probab=27.03 E-value=64 Score=31.58 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=26.8
Q ss_pred ceeEEEEEecCCeEEEecCCCccCCccCccccccCCceeEEee
Q 015234 277 ATGRICMVVPNGCLIVRFPGRLTFGEQCSSFLADPAEVEVVTF 319 (411)
Q Consensus 277 ~~g~i~~~~~~g~l~~~~~~~~~~~~~~~~~~~d~~~~e~~~~ 319 (411)
-+.+|..|+|||-|+|. ++.|+.-=.|.|.+.+
T Consensus 163 ItvtVv~VLPNGNLvI~----------GeK~i~vN~~~e~Irl 195 (246)
T PRK12699 163 ITVTVVDILPNGNLLVS----------GEKQIGINQGHEFIRL 195 (246)
T ss_pred EEEEEEEECCCCCEEEE----------EEEEEEECCCeEEEEE
Confidence 35678899999999995 3468888888998884
No 498
>PF11604 CusF_Ec: Copper binding periplasmic protein CusF; InterPro: IPR021647 CusF is a periplasmic protein involved in copper and silver resistance in Escherichia coil. CusF forms a five-stranded beta-barrel OB fold. Cu(I) binds to H36, M47 and M49 which are conserved residues in the protein []. ; PDB: 2L55_A 2VB3_X 1ZEQ_X 2QCP_X 3E6Z_X 2VB2_X.
Probab=26.87 E-value=90 Score=24.21 Aligned_cols=48 Identities=15% Similarity=0.293 Sum_probs=30.1
Q ss_pred EEEeeeCC-CCcEEEEeccccc-ccccCCcccc-----cccceecccEEEeeccc
Q 015234 214 GILHSIQR-DGSVAVGFLGLET-LWKGHFSELQ-----MAESYCVGQFVRLKANV 261 (411)
Q Consensus 214 g~~~~i~~-~g~~~~~~~~~~~-~w~~~~~~~~-----~~~~~~~g~~vr~~~~~ 261 (411)
|+|.+|+. .|++.+.-=-... .|.+=.-++. ..+.+++||.|++-...
T Consensus 1 G~V~~vd~~~~~iti~H~pIp~l~wpaMTM~F~v~~~~~l~~l~~Gd~V~F~~~~ 55 (70)
T PF11604_consen 1 GVVKSVDPEAGTITISHEPIPELGWPAMTMDFPVADPVDLAGLKPGDKVRFTFER 55 (70)
T ss_dssp EEEEEEETTTTEEEEEE--BCCCTB-SEEEEEE--TTSEESS-STT-EEEEEEEE
T ss_pred CEEEEEecCCCEEEEecCccccCCCCCeEEEEEcCChhhhhcCCCCCEEEEEEEE
Confidence 78889987 6778877655555 4765444443 34779999999987653
No 499
>TIGR00717 rpsA ribosomal protein S1. This model provides trusted hits to most long form (6 repeat) examples of RpsA. Among homologs with only four repeats are some to which other (perhaps secondary) functions have been assigned.
Probab=26.78 E-value=1.1e+02 Score=32.55 Aligned_cols=105 Identities=24% Similarity=0.313 Sum_probs=61.6
Q ss_pred EEEeeeCCCCcEEEEecccccccccCCcccccc-cceecccEEEeeccccccccCC--------------CCC----CCC
Q 015234 214 GILHSIQRDGSVAVGFLGLETLWKGHFSELQMA-ESYCVGQFVRLKANVVSPQFEW--------------PRK----REG 274 (411)
Q Consensus 214 g~~~~i~~~g~~~~~~~~~~~~w~~~~~~~~~~-~~~~~g~~vr~~~~~~~pr~~w--------------~~~----~~~ 274 (411)
|.|-+|+.| .+.|.| |....=.=+.+|+... +.|+|||.|.++-.=..+.++. ..- ..|
T Consensus 24 g~V~~i~~~-~~~v~~-g~k~~g~i~~~E~~~~~~~~~vGd~i~~~V~~~~~~~g~i~lS~~~~~~~~~~~~l~~a~~~g 101 (516)
T TIGR00717 24 GTVVAINKD-TVFVDV-GLKSEGRIPKEEFLDAPLEIQVGDEVEVYLDRVEDRFGETVLSREKAQRHELWIKLEKAYEEG 101 (516)
T ss_pred EEEEEEECC-EEEEEc-CCCcEEEEEHHHhcCCccCCCCCCEEEEEEEEEeCCCCcEEEEHHHhhhhHHHHHHHHHhhCC
Confidence 788888887 677776 5443222234555444 4699999998876433454432 211 233
Q ss_pred ccceeEEEEEecCCeEEEecCCC---ccCC-------ccCccccccCCceeEEeecC
Q 015234 275 VWATGRICMVVPNGCLIVRFPGR---LTFG-------EQCSSFLADPAEVEVVTFNT 321 (411)
Q Consensus 275 ~~~~g~i~~~~~~g~l~~~~~~~---~~~~-------~~~~~~~~d~~~~e~~~~~~ 321 (411)
.--+|+|..+..+| +.|++-|. ++.. +......++.=++=|.+.+.
T Consensus 102 ~~v~g~V~~~~~~g-~~V~i~g~~~flP~s~~~~~~~~~~~~~vG~~i~~~v~~~~~ 157 (516)
T TIGR00717 102 SIVEGKIVGKVKGG-FIVDLNGVEAFLPGSQVDVKPIKDLDSLIGKTLKFKIIKLDQ 157 (516)
T ss_pred CeEEEEEEEEECCE-EEEEECCEEEEEeHHHhcCcccCchhhhCCCEEEEEEEEEEC
Confidence 45699999998766 67777432 2211 11223456666666666654
No 500
>cd02791 MopB_CT_Nitrate-R-NapA-like Nitrate reductases, NapA (Nitrate-R-NapA), NasA, and NarB catalyze the reduction of nitrate to nitrite. Monomeric Nas is located in the cytoplasm and participates in nitrogen assimilation. Dimeric Nap is located in the periplasm and is coupled to quinol oxidation via a membrane-anchored tetraheme cytochrome. This CD (MopB_CT_Nitrate-R-Nap) is of the conserved molybdopterin_binding C-terminal (MopB_CT) region present in many, but not all, MopB homologs
Probab=26.69 E-value=49 Score=27.61 Aligned_cols=24 Identities=33% Similarity=0.641 Sum_probs=20.4
Q ss_pred cccCchhhhhhhcCccccceeeeccC
Q 015234 181 LRVHVSALERVTFGLAAGDWVRLKEE 206 (411)
Q Consensus 181 ~r~~~s~lErv~~~~~~gd~vr~~~~ 206 (411)
...++.++++. ||+.||||+++..
T Consensus 37 v~in~~dA~~l--gi~~Gd~V~v~~~ 60 (122)
T cd02791 37 VEIHPEDAARL--GLKEGDLVRVTSR 60 (122)
T ss_pred EEECHHHHHHc--CCCCCCEEEEEcC
Confidence 56788888866 9999999999865
Done!