Query 015235
Match_columns 411
No_of_seqs 223 out of 822
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qhp_A Type 1 capsular polysac 97.5 0.00025 8.4E-09 61.0 8.4 96 288-386 65-162 (166)
2 2bfw_A GLGA glycogen synthase; 96.5 0.0043 1.5E-07 54.7 6.4 90 288-381 106-198 (200)
3 2nzw_A Alpha1,3-fucosyltransfe 95.9 0.043 1.5E-06 54.8 10.9 120 245-371 178-307 (371)
4 2jjm_A Glycosyl transferase, g 95.9 0.019 6.6E-07 56.0 8.3 95 289-386 276-373 (394)
5 3c48_A Predicted glycosyltrans 95.8 0.011 3.7E-07 58.5 6.2 95 289-386 317-413 (438)
6 2gek_A Phosphatidylinositol ma 95.8 0.0068 2.3E-07 59.0 4.5 94 289-385 274-370 (406)
7 3okp_A GDP-mannose-dependent a 95.6 0.023 7.7E-07 54.9 7.4 94 289-386 264-367 (394)
8 2iw1_A Lipopolysaccharide core 95.5 0.016 5.5E-07 55.6 6.2 94 289-385 262-358 (374)
9 1f0k_A MURG, UDP-N-acetylgluco 94.8 0.019 6.6E-07 55.1 4.1 87 290-382 247-341 (364)
10 3fro_A GLGA glycogen synthase; 94.6 0.068 2.3E-06 52.2 7.8 95 288-386 321-418 (439)
11 2f9f_A First mannosyl transfer 94.6 0.014 4.8E-07 50.9 2.4 71 289-363 89-159 (177)
12 3oy2_A Glycosyltransferase B73 94.2 0.03 1E-06 54.9 4.0 96 289-386 265-378 (413)
13 2x0d_A WSAF; GT4 family, trans 93.4 0.055 1.9E-06 54.3 4.4 97 289-390 306-402 (413)
14 2r60_A Glycosyl transferase, g 93.3 0.057 2E-06 54.6 4.4 95 289-386 346-447 (499)
15 2x6q_A Trehalose-synthase TRET 92.9 0.11 3.7E-06 50.9 5.5 91 290-385 308-401 (416)
16 3rhz_A GTF3, nucleotide sugar 92.4 0.13 4.4E-06 50.5 5.3 90 289-383 225-321 (339)
17 2qzs_A Glycogen synthase; glyc 92.2 0.15 5E-06 51.2 5.6 91 290-385 359-463 (485)
18 1rzu_A Glycogen synthase 1; gl 92.2 0.15 5E-06 51.2 5.5 90 291-385 359-462 (485)
19 2iuy_A Avigt4, glycosyltransfe 89.0 0.15 5.1E-06 48.5 2.1 73 289-365 223-307 (342)
20 1vgv_A UDP-N-acetylglucosamine 87.4 0.35 1.2E-05 46.5 3.6 77 289-374 274-352 (384)
21 3beo_A UDP-N-acetylglucosamine 85.5 0.67 2.3E-05 44.2 4.5 76 289-373 274-351 (375)
22 3s28_A Sucrose synthase 1; gly 85.1 0.96 3.3E-05 49.6 5.9 93 291-386 657-757 (816)
23 3nb0_A Glycogen [starch] synth 83.4 0.32 1.1E-05 52.3 1.2 109 289-398 510-634 (725)
24 2vsy_A XCC0866; transferase, g 81.0 2.4 8.4E-05 43.1 6.8 101 289-404 445-562 (568)
25 1uqt_A Alpha, alpha-trehalose- 81.0 2.7 9.1E-05 43.0 7.0 91 288-383 342-439 (482)
26 2hy7_A Glucuronosyltransferase 69.7 4.5 0.00015 39.8 5.0 64 289-361 276-347 (406)
27 3vue_A GBSS-I, granule-bound s 69.5 3.2 0.00011 42.9 4.0 95 290-387 394-500 (536)
28 3dzc_A UDP-N-acetylglucosamine 61.4 13 0.00046 36.4 6.6 93 289-401 299-394 (396)
29 3s2u_A UDP-N-acetylglucosamine 59.7 13 0.00046 35.8 6.2 81 290-378 245-338 (365)
30 2ygg_A Sodium/hydrogen exchang 59.0 12 0.00041 28.0 4.3 46 363-408 4-54 (70)
31 2o6l_A UDP-glucuronosyltransfe 56.0 7.1 0.00024 32.9 3.1 80 296-382 85-168 (170)
32 1v4v_A UDP-N-acetylglucosamine 47.0 41 0.0014 31.7 7.2 76 289-373 266-343 (376)
33 3ot5_A UDP-N-acetylglucosamine 42.8 41 0.0014 33.0 6.6 94 289-401 293-388 (403)
34 3otg_A CALG1; calicheamicin, T 32.7 21 0.00072 34.2 2.6 86 290-380 301-392 (412)
35 3s8f_C Cytochrome C oxidase po 29.4 43 0.0015 21.5 2.7 21 18-38 4-24 (34)
36 2iyf_A OLED, oleandomycin glyc 28.6 49 0.0017 31.9 4.5 81 292-377 294-380 (430)
37 3oti_A CALG3; calicheamicin, T 27.1 1.3E+02 0.0046 28.4 7.4 83 290-379 292-380 (398)
38 2q2k_A Hypothetical protein; p 24.0 73 0.0025 22.7 3.4 39 342-380 25-64 (70)
39 3t5t_A Putative glycosyltransf 23.2 1E+02 0.0034 31.5 5.7 85 289-377 363-452 (496)
40 1iir_A Glycosyltransferase GTF 20.9 60 0.002 31.3 3.4 84 291-382 295-382 (415)
41 2xze_Q Charged multivesicular 20.7 63 0.0021 21.5 2.3 15 365-379 25-39 (40)
No 1
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.54 E-value=0.00025 Score=61.01 Aligned_cols=96 Identities=10% Similarity=0.110 Sum_probs=67.8
Q ss_pred chhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CH
Q 015235 288 PLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SD 365 (411)
Q Consensus 288 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~ 365 (411)
..+..+.++.+..++.|.-.......++|||.+||||||..+.. -...++++-... .++..+..++.+.+..+ .+
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPL-SATRQFALDERS--LFEPNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTT-CGGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCC-CchhhhccCCce--EEcCCCHHHHHHHHHHHHhCH
Confidence 45678899999999999876677889999999999999994321 112233333333 56777777766666554 67
Q ss_pred HHHHHHHHHHHHhhccceecC
Q 015235 366 AEFVSLHNNLVKVQKHFQWNS 386 (411)
Q Consensus 366 ~~~~~mq~~l~~~~~~f~y~~ 386 (411)
+...+|.++.++..++|.|..
T Consensus 142 ~~~~~~~~~~~~~~~~~s~~~ 162 (166)
T 3qhp_A 142 LERERMQNEYAKSALNYTLEN 162 (166)
T ss_dssp HHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHCChhh
Confidence 788899998888778888764
No 2
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.46 E-value=0.0043 Score=54.66 Aligned_cols=90 Identities=14% Similarity=0.144 Sum_probs=63.7
Q ss_pred chhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC---C
Q 015235 288 PLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI---S 364 (411)
Q Consensus 288 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i---~ 364 (411)
..++.+.++.+.++++|.-....+..++|||.+|| |||.++.- ...+.+ -....+.++..+..++.+.|..+ .
T Consensus 106 ~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 106 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDII-TNETGILVKAGDPGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCH--HHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCC--ChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcC
Confidence 34678899999999999877777889999999998 67777632 122333 23345566777777666655554 6
Q ss_pred HHHHHHHHHHHHHhhcc
Q 015235 365 DAEFVSLHNNLVKVQKH 381 (411)
Q Consensus 365 ~~~~~~mq~~l~~~~~~ 381 (411)
++++.+|.++.++..+.
T Consensus 182 ~~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 182 RSDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78888898887765443
No 3
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=95.89 E-value=0.043 Score=54.78 Aligned_cols=120 Identities=13% Similarity=0.209 Sum_probs=76.5
Q ss_pred CccceeeeeccCCChHHHHHHHHHhhcCCccccccccccc--CCCchhHHhhccCceEEeecC---CCCCCchhHHHHHh
Q 015235 245 ENRTVLGFWAGHRNSKIRVILARVWENDTELDISNNRINR--AIGPLVYQRRFYKTKFCICPG---GSQVNSARIADSIH 319 (411)
Q Consensus 245 ~~R~~L~fFaG~~~~~vR~~L~~~~~~~~~~~i~~~~~~~--~~~~~~y~~~~~~S~FCL~p~---G~~~~s~rl~dai~ 319 (411)
.+++..++++.+.+...|..+.+.+..--.+++. ++|.. +.......+.+++-||.|+.. .....+-.|++|+.
T Consensus 178 ~K~k~v~wvvSnc~~~~R~~~~~~L~k~i~Vd~~-G~c~~~~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~ 256 (371)
T 2nzw_A 178 LKRGFASFVASNPNAPIRNAFYDALNSIEPVTGG-GSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYF 256 (371)
T ss_dssp TSSEEEEECCSCCCCHHHHHHHHHHTTTSCCEEC-SSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHH
T ss_pred CCceEEEEEEeCCCcHHHHHHHHHHhCcCCEeeC-CCccCCCCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHh
Confidence 4455566677766556788888887754444432 22211 111235678889999999864 34556899999999
Q ss_pred hCceeEEEeCc-e--ecCCCCCCCCCcEEEEEcccCHHHHHHHHhcCC--HHHHHHH
Q 015235 320 YGCVPVILSNY-Y--DLPFNDILDWRKFAVILNERDVYQLKQILKNIS--DAEFVSL 371 (411)
Q Consensus 320 ~GCIPVii~d~-~--~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i~--~~~~~~m 371 (411)
+|||||+++.. + .+|=...|+-.+| +...+|.+.|+.+. ++.+.++
T Consensus 257 ~g~VPI~~G~~~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~~n~~~Y~~y 307 (371)
T 2nzw_A 257 SHTIPIYWGSPSVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLHTHKNAYLDM 307 (371)
T ss_dssp TTCEEEEESCTTGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHHTCHHHHHHH
T ss_pred CCeEEEEECCCchhhhCCCCceEEcccC------CCHHHHHHHHHHHhcCHHHHHHH
Confidence 99999999974 1 2343444544443 35667888887774 4455443
No 4
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=95.88 E-value=0.019 Score=56.00 Aligned_cols=95 Identities=6% Similarity=0.063 Sum_probs=70.2
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.+..+.++.+..++.|.-.+..+..++|||.+| +|||.++. -...+.++-....+.++..|..++.+.|..+ .++
T Consensus 276 ~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~--~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 352 (394)
T 2jjm_A 276 DNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRV--GGIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDEE 352 (394)
T ss_dssp SCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECC--TTSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCHH
T ss_pred hhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecC--CChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCHH
Confidence 456778999999999987666788999999999 57777774 2345566555667778888887777666554 567
Q ss_pred HHHHHHHHHHHhh-ccceecC
Q 015235 367 EFVSLHNNLVKVQ-KHFQWNS 386 (411)
Q Consensus 367 ~~~~mq~~l~~~~-~~f~y~~ 386 (411)
...+|.++.++.. +.|.|..
T Consensus 353 ~~~~~~~~~~~~~~~~~s~~~ 373 (394)
T 2jjm_A 353 LHRNMGERARESVYEQFRSEK 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHH
Confidence 7888888877654 7776653
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=95.79 E-value=0.011 Score=58.47 Aligned_cols=95 Identities=11% Similarity=0.158 Sum_probs=69.1
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.+..+.++.+..++.|.-.......++|||.+|| |||.++. -...+++.-....+.++..|..++.+.|..+ .++
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~--~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARV--GGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESC--TTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCC--CChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHH
Confidence 4677889999999999877777889999999998 8888873 1233445445566778877877766666554 567
Q ss_pred HHHHHHHHHHHhhccceecC
Q 015235 367 EFVSLHNNLVKVQKHFQWNS 386 (411)
Q Consensus 367 ~~~~mq~~l~~~~~~f~y~~ 386 (411)
...+|.++.++..+.|.|..
T Consensus 394 ~~~~~~~~~~~~~~~~s~~~ 413 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWAA 413 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHH
Confidence 77888887776555466653
No 6
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.77 E-value=0.0068 Score=59.02 Aligned_cols=94 Identities=12% Similarity=0.151 Sum_probs=66.4
Q ss_pred hhHHhhccCceEEeecCC-CCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CH
Q 015235 289 LVYQRRFYKTKFCICPGG-SQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SD 365 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G-~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~ 365 (411)
.+..+.+..+.+++.|.. .+.....++||+.+|| |||.++.-- ..+.++-....+.++..+..++.+.|..+ .+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 456788999999999963 5556788999999997 788877521 22333333445667777777777666655 57
Q ss_pred HHHHHHHHHHHHhhccceec
Q 015235 366 AEFVSLHNNLVKVQKHFQWN 385 (411)
Q Consensus 366 ~~~~~mq~~l~~~~~~f~y~ 385 (411)
+...+|.++.++..+.|.|.
T Consensus 351 ~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 351 QLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHHHHHGGGGBHH
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 77888888887766676654
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=95.57 E-value=0.023 Score=54.91 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=70.0
Q ss_pred hhHHhhccCceEEeecCCC-------CCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHh
Q 015235 289 LVYQRRFYKTKFCICPGGS-------QVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILK 361 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~-------~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~ 361 (411)
.+..+.++.+.+++.|.-. +.....++|||.+| +|||.++. -...+.++-. ..+.++..|..++.+.+.
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-~PvI~~~~--~~~~e~i~~~-~g~~~~~~d~~~l~~~i~ 339 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-VPVIAGTS--GGAPETVTPA-TGLVVEGSDVDKLSELLI 339 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-CCEEECSS--TTGGGGCCTT-TEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcC-CCEEEeCC--CChHHHHhcC-CceEeCCCCHHHHHHHHH
Confidence 5677889999999999876 66788999999999 58888774 2344556555 677788888877777666
Q ss_pred cC--CHHHHHHHHHHHHH-hhccceecC
Q 015235 362 NI--SDAEFVSLHNNLVK-VQKHFQWNS 386 (411)
Q Consensus 362 ~i--~~~~~~~mq~~l~~-~~~~f~y~~ 386 (411)
.+ .++...+|.++.++ +.++|.|..
T Consensus 340 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~ 367 (394)
T 3okp_A 340 ELLDDPIRRAAMGAAGRAHVEAEWSWEI 367 (394)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTBHHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 55 67778888888766 455676643
No 8
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.54 E-value=0.016 Score=55.64 Aligned_cols=94 Identities=10% Similarity=0.115 Sum_probs=67.3
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEc-ccCHHHHHHHHhcC--CH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILN-ERDVYQLKQILKNI--SD 365 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~-e~~~~~l~~~L~~i--~~ 365 (411)
.+..+.++.+..++.|.-.+..+..++|||.+|| |||.++.- ...+.+.-....+.++ ..+..++.+.+..+ .+
T Consensus 262 ~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 262 NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQS 338 (374)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCH
T ss_pred ccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcCh
Confidence 4567889999999999866667888999999998 88888742 2233343335566776 66777666665554 67
Q ss_pred HHHHHHHHHHHHhhccceec
Q 015235 366 AEFVSLHNNLVKVQKHFQWN 385 (411)
Q Consensus 366 ~~~~~mq~~l~~~~~~f~y~ 385 (411)
+...+|.++.++..+.+.|.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHHHHHHHHhhHH
Confidence 77889988888776665443
No 9
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=94.78 E-value=0.019 Score=55.14 Aligned_cols=87 Identities=10% Similarity=0.142 Sum_probs=62.7
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCC------CCCCCCCcEEEEEcccC--HHHHHHHHh
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPF------NDILDWRKFAVILNERD--VYQLKQILK 361 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf------~~~idw~~fsV~v~e~~--~~~l~~~L~ 361 (411)
+..+.|+.+..+++|.| ..-+.||+.+|+ |||..+.--.|. .++++-.. .+.++..| ..++.+.|.
T Consensus 247 ~~~~~~~~ad~~v~~sg----~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~ 320 (364)
T 1f0k_A 247 DMAAAYAWADVVVCRSG----ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLA 320 (364)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHH
T ss_pred hHHHHHHhCCEEEECCc----hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHH
Confidence 56678899999999986 567999999996 888876433332 12333333 77888888 888988888
Q ss_pred cCCHHHHHHHHHHHHHhhccc
Q 015235 362 NISDAEFVSLHNNLVKVQKHF 382 (411)
Q Consensus 362 ~i~~~~~~~mq~~l~~~~~~f 382 (411)
.+.++...+|.++.++..+.+
T Consensus 321 ~l~~~~~~~~~~~~~~~~~~~ 341 (364)
T 1f0k_A 321 GWSRETLLTMAERARAASIPD 341 (364)
T ss_dssp TCCHHHHHHHHHHHHHTCCTT
T ss_pred hcCHHHHHHHHHHHHHhhccC
Confidence 886666778877776654443
No 10
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=94.63 E-value=0.068 Score=52.18 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=67.3
Q ss_pred chhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC---C
Q 015235 288 PLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI---S 364 (411)
Q Consensus 288 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i---~ 364 (411)
..+..+.++.+..+++|.-.+.....++|||++|| |||.++.- ...+.++-. ..+.++..|..++.+.+..+ .
T Consensus 321 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G~-Pvi~s~~~--~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 321 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDIITNE-TGILVKAGDPGELANAILKALELS 396 (439)
T ss_dssp HHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTTC-EEEEESST--HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCCC-CeEEcCCC--CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhcC
Confidence 35577889999999999877777889999999995 78877642 122334322 56677777877766665543 4
Q ss_pred HHHHHHHHHHHHHhhccceecC
Q 015235 365 DAEFVSLHNNLVKVQKHFQWNS 386 (411)
Q Consensus 365 ~~~~~~mq~~l~~~~~~f~y~~ 386 (411)
++...+|.++.++..+.|.|..
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~ 418 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEK 418 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHhhCcHHH
Confidence 5677888888877666776543
No 11
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=94.60 E-value=0.014 Score=50.91 Aligned_cols=71 Identities=17% Similarity=0.205 Sum_probs=47.7
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI 363 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i 363 (411)
.+..+.++.+..++.|.-....+..++|||.+|| |||.++.- ...+.+.-....+.+ ..+..++.+.+..+
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l 159 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG--GFKETVINEKTGYLV-NADVNEIIDAMKKV 159 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH--HHHHHCCBTTTEEEE-CSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC--CHHHHhcCCCccEEe-CCCHHHHHHHHHHH
Confidence 4467889999999997755556778999999997 78877742 122334333445555 66776665555444
No 12
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=94.18 E-value=0.03 Score=54.90 Aligned_cols=96 Identities=10% Similarity=0.048 Sum_probs=63.2
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-----ecCCCC-CCCCCcE-------EE--EEcccCH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-----DLPFND-ILDWRKF-------AV--ILNERDV 353 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-----~lPf~~-~idw~~f-------sV--~v~e~~~ 353 (411)
.+..+.++.+..++.|.-......-+.|||++|| |||.++.- .-.-.. .++...+ .+ .++..+.
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~ 343 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDV 343 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCH
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCChHHHHccCcccccccccccccccccCcceeeCCCCH
Confidence 4577789999999999877777889999999996 88888741 111110 0111111 33 5566677
Q ss_pred HHHHHHHhcC--CHHHHHHHHHHHHHh-hccceecC
Q 015235 354 YQLKQILKNI--SDAEFVSLHNNLVKV-QKHFQWNS 386 (411)
Q Consensus 354 ~~l~~~L~~i--~~~~~~~mq~~l~~~-~~~f~y~~ 386 (411)
.++.+.| .+ .++...+|.++.++. .++|.|..
T Consensus 344 ~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~~ 378 (413)
T 3oy2_A 344 DDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWDD 378 (413)
T ss_dssp HHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred HHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 7766666 43 466678888887765 46776654
No 13
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=93.41 E-value=0.055 Score=54.26 Aligned_cols=97 Identities=14% Similarity=0.099 Sum_probs=60.6
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcCCHHHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNISDAEF 368 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i~~~~~ 368 (411)
.+..+.++.+..+++|.-.+..+.-++|||++|| |||.++. +..++++-..-.+.+++.|...+.+.|..+-++.-
T Consensus 306 ~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~---g~~e~v~~~~~G~lv~~~d~~~la~ai~~ll~~~~ 381 (413)
T 2x0d_A 306 EDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY---ENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFN 381 (413)
T ss_dssp HHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB---TTBCGGGTBTTEEEESSCSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC---CcchhhhcCCCEEEeCCCCHHHHHHHHHHHHcCHH
Confidence 5677889999999998643334567899999997 7776543 23466655566778898898887776665532221
Q ss_pred HHHHHHHHHhhccceecCCCCC
Q 015235 369 VSLHNNLVKVQKHFQWNSPPVR 390 (411)
Q Consensus 369 ~~mq~~l~~~~~~f~y~~~~~~ 390 (411)
.+.+ +.++..+.|.|...-..
T Consensus 382 ~~~~-~~~~~~~~~~W~~~~~~ 402 (413)
T 2x0d_A 382 NRDV-DKKESSNMMFYINEFNE 402 (413)
T ss_dssp --------CCBSCGGGCCCC--
T ss_pred HHHH-hHHHHHHhCCHHHHHHH
Confidence 1112 33444457888876444
No 14
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=93.30 E-value=0.057 Score=54.59 Aligned_cols=95 Identities=12% Similarity=0.171 Sum_probs=65.3
Q ss_pred hhHHhhccCc----eEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC-
Q 015235 289 LVYQRRFYKT----KFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI- 363 (411)
Q Consensus 289 ~~y~~~~~~S----~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i- 363 (411)
.+..+.++.+ ..++.|.-.......++|||++|| |||.++.- ...+++.-....+.++..|..++.+.|..+
T Consensus 346 ~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~--g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll 422 (499)
T 2r60_A 346 QELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNG--GPAEILDGGKYGVLVDPEDPEDIARGLLKAF 422 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSB--HHHHHTGGGTSSEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCC--CHHHHhcCCceEEEeCCCCHHHHHHHHHHHH
Confidence 4667888999 999999766666788999999997 88888732 123344333445667777777766665554
Q ss_pred -CHHHHHHHHHHHHHh-hccceecC
Q 015235 364 -SDAEFVSLHNNLVKV-QKHFQWNS 386 (411)
Q Consensus 364 -~~~~~~~mq~~l~~~-~~~f~y~~ 386 (411)
.++...+|.++.++. .++|.|..
T Consensus 423 ~~~~~~~~~~~~a~~~~~~~fs~~~ 447 (499)
T 2r60_A 423 ESEETWSAYQEKGKQRVEERYTWQE 447 (499)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSBHHH
T ss_pred hCHHHHHHHHHHHHHHHHHhCCHHH
Confidence 566677887777654 44577654
No 15
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=92.86 E-value=0.11 Score=50.94 Aligned_cols=91 Identities=9% Similarity=0.010 Sum_probs=61.2
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHHH
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDAE 367 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~~ 367 (411)
+..+.++.+..++.|.-.+.....++|||++|| |||.++.-- ..+++.-....+.++ +..++.+.|..+ .++.
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~~ 382 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPEV 382 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHHH
Confidence 567788999999999766666788999999997 888887411 123332233445555 666655555444 5677
Q ss_pred HHHHHHHHHH-hhccceec
Q 015235 368 FVSLHNNLVK-VQKHFQWN 385 (411)
Q Consensus 368 ~~~mq~~l~~-~~~~f~y~ 385 (411)
..+|.++.++ +.++|.|.
T Consensus 383 ~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 383 SKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHcCHH
Confidence 8888888765 44567654
No 16
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=92.42 E-value=0.13 Score=50.48 Aligned_cols=90 Identities=16% Similarity=0.219 Sum_probs=63.4
Q ss_pred hhHHhhccCceEEeecC-CC------CCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHh
Q 015235 289 LVYQRRFYKTKFCICPG-GS------QVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILK 361 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~-G~------~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~ 361 (411)
.+..+.++++.|+|+.. |. ......++|+|++| +|||+++.-.++ +++.=....+.++ ++.++.+.|.
T Consensus 225 ~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G-~PVI~~~~~~~~--~~v~~~~~G~~~~--~~~e~~~~i~ 299 (339)
T 3rhz_A 225 EQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAG-IPVIVQEGIANQ--ELIENNGLGWIVK--DVEEAIMKVK 299 (339)
T ss_dssp HHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHT-CCEEEETTCTTT--HHHHHHTCEEEES--SHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcC-CCEEEccChhHH--HHHHhCCeEEEeC--CHHHHHHHHH
Confidence 45667787899999971 10 11245799999999 599987743221 2233334455554 5778888899
Q ss_pred cCCHHHHHHHHHHHHHhhccce
Q 015235 362 NISDAEFVSLHNNLVKVQKHFQ 383 (411)
Q Consensus 362 ~i~~~~~~~mq~~l~~~~~~f~ 383 (411)
.++++++.+|+++.++..+.+.
T Consensus 300 ~l~~~~~~~m~~na~~~a~~~~ 321 (339)
T 3rhz_A 300 NVNEDEYIELVKNVRSFNPILR 321 (339)
T ss_dssp HCCHHHHHHHHHHHHHHTHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999998877764
No 17
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=92.22 E-value=0.15 Score=51.18 Aligned_cols=91 Identities=9% Similarity=0.183 Sum_probs=61.5
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCC---------cEEEEEcccCHHHHHHHH
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWR---------KFAVILNERDVYQLKQIL 360 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~---------~fsV~v~e~~~~~l~~~L 360 (411)
...+.++.+..++.|.-.+....-+.|||++|| |||.++.- ...+++.-. ...+.++..|..++.+.|
T Consensus 359 ~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i 435 (485)
T 2qzs_A 359 FSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTG--GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAI 435 (485)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCC--CccceeccCccccccccccceEEECCCCHHHHHHHH
Confidence 345788999999999877777888999999996 67777631 122333322 456677877877766655
Q ss_pred hcC-----CHHHHHHHHHHHHHhhccceec
Q 015235 361 KNI-----SDAEFVSLHNNLVKVQKHFQWN 385 (411)
Q Consensus 361 ~~i-----~~~~~~~mq~~l~~~~~~f~y~ 385 (411)
..+ .++...+|.++.++ +.|.|.
T Consensus 436 ~~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 463 (485)
T 2qzs_A 436 RRAFVLWSRPSLWRFVQRQAMA--MDFSWQ 463 (485)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHH--CCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHh--hcCCHH
Confidence 553 46667777776643 555554
No 18
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=92.18 E-value=0.15 Score=51.22 Aligned_cols=90 Identities=13% Similarity=0.142 Sum_probs=60.5
Q ss_pred HHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCC---------cEEEEEcccCHHHHHHHHh
Q 015235 291 YQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWR---------KFAVILNERDVYQLKQILK 361 (411)
Q Consensus 291 y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~---------~fsV~v~e~~~~~l~~~L~ 361 (411)
..+.++.+..++.|.-......-+.|||++|| |||.++.- ...+++.=. ...+.++..|..++.+.|.
T Consensus 359 ~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~ 435 (485)
T 1rzu_A 359 SHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTG--GLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIR 435 (485)
T ss_dssp HHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHH
T ss_pred HHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCC--ChhheecccccccccccCCcceEeCCCCHHHHHHHHH
Confidence 45788999999999877777888999999996 67777641 112333322 4456678778777666555
Q ss_pred cC-----CHHHHHHHHHHHHHhhccceec
Q 015235 362 NI-----SDAEFVSLHNNLVKVQKHFQWN 385 (411)
Q Consensus 362 ~i-----~~~~~~~mq~~l~~~~~~f~y~ 385 (411)
.+ .++...+|.++.++ ++|.|.
T Consensus 436 ~ll~~~~~~~~~~~~~~~~~~--~~fs~~ 462 (485)
T 1rzu_A 436 RTVRYYHDPKLWTQMQKLGMK--SDVSWE 462 (485)
T ss_dssp HHHHHHTCHHHHHHHHHHHHT--CCCBHH
T ss_pred HHHHHhCCHHHHHHHHHHHHH--HhCChH
Confidence 43 46667777776643 455443
No 19
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=89.02 E-value=0.15 Score=48.53 Aligned_cols=73 Identities=7% Similarity=0.019 Sum_probs=53.1
Q ss_pred hhHHhhccCceEEeecCC----------CCCCchhHHHHHhhCceeEEEeCceecCCCCCCCC--CcEEEEEcccCHHHH
Q 015235 289 LVYQRRFYKTKFCICPGG----------SQVNSARIADSIHYGCVPVILSNYYDLPFNDILDW--RKFAVILNERDVYQL 356 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G----------~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw--~~fsV~v~e~~~~~l 356 (411)
.+..+.++.+..++.|.- .+.....+.|||.+|| |||.++. -...+++.- ....+.++. |..++
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~--~~~~e~~~~~~~~~g~~~~~-d~~~l 298 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGN--GCLAEIVPSVGEVVGYGTDF-APDEA 298 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCT--TTHHHHGGGGEEECCSSSCC-CHHHH
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCC--CChHHHhcccCCCceEEcCC-CHHHH
Confidence 455788999999999976 5667889999999996 8888774 123344433 344556677 88888
Q ss_pred HHHHhcCCH
Q 015235 357 KQILKNISD 365 (411)
Q Consensus 357 ~~~L~~i~~ 365 (411)
.+.|..+-+
T Consensus 299 ~~~i~~l~~ 307 (342)
T 2iuy_A 299 RRTLAGLPA 307 (342)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHHHHH
Confidence 888877754
No 20
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=87.40 E-value=0.35 Score=46.55 Aligned_cols=77 Identities=9% Similarity=0.165 Sum_probs=49.1
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.+..+.|+.+..++.|.|. . +.||+.+|+ |||.++..- ...++++-. ..+.++. |..+|.+.+..+ .++
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~---~--~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~ 344 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG---I--QEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDEN 344 (384)
T ss_dssp HHHHHHHHHCSEEEESSST---G--GGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCcEEEECCcc---h--HHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhChH
Confidence 4567888999998888732 2 789999996 999887521 122334333 5666655 666666655544 455
Q ss_pred HHHHHHHH
Q 015235 367 EFVSLHNN 374 (411)
Q Consensus 367 ~~~~mq~~ 374 (411)
...+|.++
T Consensus 345 ~~~~~~~~ 352 (384)
T 1vgv_A 345 EYQAMSRA 352 (384)
T ss_dssp HHHHHHSS
T ss_pred HHhhhhhc
Confidence 55555543
No 21
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=85.54 E-value=0.67 Score=44.24 Aligned_cols=76 Identities=7% Similarity=0.105 Sum_probs=47.4
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.+..+.|+.+.+++.|.| .-+.||+.+|+ |||.++..- ...++++-. ..+.++. |..+|.+.+..+ .++
T Consensus 274 ~~~~~~~~~ad~~v~~sg-----~~~lEA~a~G~-Pvi~~~~~~-~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~~ 344 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDSG-----GVQEEAPSLGV-PVLVLRDTT-ERPEGIEAG-TLKLAGT-DEETIFSLADELLSDKE 344 (375)
T ss_dssp HHHHHHHHTCSEEEECCH-----HHHHHHHHHTC-CEEECSSCC-SCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCcEEEECCC-----ChHHHHHhcCC-CEEEecCCC-CCceeecCC-ceEEcCC-CHHHHHHHHHHHHhChH
Confidence 366788999999999862 23899999996 999885421 123344433 4555654 666665555544 344
Q ss_pred HHHHHHH
Q 015235 367 EFVSLHN 373 (411)
Q Consensus 367 ~~~~mq~ 373 (411)
...+|.+
T Consensus 345 ~~~~~~~ 351 (375)
T 3beo_A 345 AHDKMSK 351 (375)
T ss_dssp HHHHHCC
T ss_pred hHhhhhh
Confidence 4455543
No 22
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=85.09 E-value=0.96 Score=49.59 Aligned_cols=93 Identities=10% Similarity=0.158 Sum_probs=62.2
Q ss_pred HHhhcc-CceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhc------C
Q 015235 291 YQRRFY-KTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKN------I 363 (411)
Q Consensus 291 y~~~~~-~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~------i 363 (411)
..+.+. .+..++.|.=......-+.|||++|| |||.++.-- ..+++.-....+.++..|...+.+.|.. -
T Consensus 657 L~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~ 733 (816)
T 3s28_A 657 LYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKE 733 (816)
T ss_dssp HHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhcc
Confidence 344555 45677888766667888999999997 788876321 2233434455677888787766655532 1
Q ss_pred CHHHHHHHHHHHHH-hhccceecC
Q 015235 364 SDAEFVSLHNNLVK-VQKHFQWNS 386 (411)
Q Consensus 364 ~~~~~~~mq~~l~~-~~~~f~y~~ 386 (411)
.++...+|.++.++ +.++|.|..
T Consensus 734 d~~~~~~m~~~ar~~a~~~fSwe~ 757 (816)
T 3s28_A 734 DPSHWDEISKGGLQRIEEKYTWQI 757 (816)
T ss_dssp CTHHHHHHHHHHHHHHHHSCCHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCHHH
Confidence 46777888888776 447887765
No 23
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=83.39 E-value=0.32 Score=52.31 Aligned_cols=109 Identities=14% Similarity=0.233 Sum_probs=70.4
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCc-----eecCCCCCCCCCcEEEEEcc---cC----HHHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNY-----YDLPFNDILDWRKFAVILNE---RD----VYQL 356 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~-----~~lPf~~~idw~~fsV~v~e---~~----~~~l 356 (411)
.+|.+.++.+...+.|.=+++...-..||+++|+ |||.++- ++......-+=....+.|+. .+ +..|
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aeaL 588 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFGSYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQL 588 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHHHHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChhhhhhccccccCCCCceEEEeCCCCCCHHHHHHHH
Confidence 5789999999999999878888999999999995 6666763 33322100000012233321 12 3345
Q ss_pred HHHHh---cCCHHHHHHHHHHHHHhhccceecCCCCCc-CHHHHHH
Q 015235 357 KQILK---NISDAEFVSLHNNLVKVQKHFQWNSPPVRF-DAFHMVM 398 (411)
Q Consensus 357 ~~~L~---~i~~~~~~~mq~~l~~~~~~f~y~~~~~~~-DAf~~il 398 (411)
.+.|. ..++++..+|+++.+++.+.|.|......+ ++++.++
T Consensus 589 a~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~iA~~Yl~~Ye~aL 634 (725)
T 3nb0_A 589 VDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYVKARQLAL 634 (725)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 55554 346788889999998888999998754333 4554444
No 24
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=81.03 E-value=2.4 Score=43.12 Aligned_cols=101 Identities=17% Similarity=0.247 Sum_probs=61.2
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEE-------eCce-----ecCCCCCCCCCcEEEEEcccCHHHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVIL-------SNYY-----DLPFNDILDWRKFAVILNERDVYQL 356 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii-------~d~~-----~lPf~~~idw~~fsV~v~e~~~~~l 356 (411)
.+..+.+..+..++.|.-. .....+.|||.+|| |||. ++.- ..-..++|. ++..++
T Consensus 445 ~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~----------~~~~~l 512 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPY-NAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGLDEMNV----------ADDAAF 512 (568)
T ss_dssp HHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTCGGGBC----------SSHHHH
T ss_pred HHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCChhhhc----------CCHHHH
Confidence 3677889999999998766 56778999999996 9998 5422 001122221 144444
Q ss_pred HHHHhcC--CHHHHHHHHHHHHHhh---ccceecCCCCCcCHHHHHHHHHHHH
Q 015235 357 KQILKNI--SDAEFVSLHNNLVKVQ---KHFQWNSPPVRFDAFHMVMYELWLR 404 (411)
Q Consensus 357 ~~~L~~i--~~~~~~~mq~~l~~~~---~~f~y~~~~~~~DAf~~il~~l~~R 404 (411)
.+.+..+ .++...+|+++.++.. +.|.|..- -+.+.-+..++|.+
T Consensus 513 a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~---~~~~~~~y~~~~~~ 562 (568)
T 2vsy_A 513 VAKAVALASDPAALTALHARVDVLRRASGVFHMDGF---ADDFGALLQALARR 562 (568)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCHHHH---HHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCHHHH---HHHHHHHHHHHHHH
Confidence 4433332 5677888888887654 66655432 23333444444443
No 25
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=80.97 E-value=2.7 Score=43.04 Aligned_cols=91 Identities=16% Similarity=0.113 Sum_probs=60.0
Q ss_pred chhHHhhccCceEEeecCCCCCCchhHHHHHhhCc----eeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhc-
Q 015235 288 PLVYQRRFYKTKFCICPGGSQVNSARIADSIHYGC----VPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKN- 362 (411)
Q Consensus 288 ~~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GC----IPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~- 362 (411)
..+....++.+.-|+.|.=......-..|||++|+ -|||+++.-=. .+.++ -++.|+..|...+.+.|..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l~---~g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANELT---SALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHhC---CeEEECCCCHHHHHHHHHHH
Confidence 45677888999999998755556778999999998 68999873211 12233 2567888887765554433
Q ss_pred --CCHHHHHHHHHHHHHhhccce
Q 015235 363 --ISDAEFVSLHNNLVKVQKHFQ 383 (411)
Q Consensus 363 --i~~~~~~~mq~~l~~~~~~f~ 383 (411)
.++++..+|.+++++....+.
T Consensus 417 L~~~~~~r~~~~~~~~~~v~~~s 439 (482)
T 1uqt_A 417 LTMSLAERISRHAEMLDVIVKND 439 (482)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHHHHHHHHhCC
Confidence 356666666666655444443
No 26
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=69.74 E-value=4.5 Score=39.82 Aligned_cols=64 Identities=16% Similarity=0.211 Sum_probs=45.8
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHH-------hhCceeEEEeCceecCCCCCCCCCcEEEE-EcccCHHHHHHHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSI-------HYGCVPVILSNYYDLPFNDILDWRKFAVI-LNERDVYQLKQIL 360 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai-------~~GCIPVii~d~~~lPf~~~idw~~fsV~-v~e~~~~~l~~~L 360 (411)
.+..+.++.+..++.|.-.+.....+.||+ ++| +|||.+|. +.+ ....+. ++..|..++.+.+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G-~PVIas~~-------v~~-~~~G~l~v~~~d~~~la~ai 346 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFG-LPAVCPNA-------VVG-PYKSRFGYTPGNADSVIAAI 346 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHT-CCEEEEGG-------GTC-SCSSEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCC-CcEEEehh-------ccc-CcceEEEeCCCCHHHHHHHH
Confidence 456778999999999976666677899999 999 59998887 222 223345 7777777655544
Q ss_pred h
Q 015235 361 K 361 (411)
Q Consensus 361 ~ 361 (411)
.
T Consensus 347 ~ 347 (406)
T 2hy7_A 347 T 347 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 27
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=69.51 E-value=3.2 Score=42.88 Aligned_cols=95 Identities=9% Similarity=0.122 Sum_probs=56.8
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCc-----eecCCCCC---CCCCcEEEEEcccCHHHHHHH--
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNY-----YDLPFNDI---LDWRKFAVILNERDVYQLKQI-- 359 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~-----~~lPf~~~---idw~~fsV~v~e~~~~~l~~~-- 359 (411)
...+.++.+...++|.=+++...-+.|||.+||.+| .++- .+..-..- -+.+.-...++..|...|.+.
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI-~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ 472 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCA-CASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLK 472 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEE-ECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhheeecccccCCCCHHHHHHHHcCCCEE-EcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHH
Confidence 345678889999999877888889999999997555 4541 11110000 000111123555666554443
Q ss_pred --HhcCCHHHHHHHHHHHHHhhccceecCC
Q 015235 360 --LKNISDAEFVSLHNNLVKVQKHFQWNSP 387 (411)
Q Consensus 360 --L~~i~~~~~~~mq~~l~~~~~~f~y~~~ 387 (411)
|....++++.+|+++. +.+.|.|...
T Consensus 473 ral~~~~~~~~~~~~~~a--m~~~fSW~~~ 500 (536)
T 3vue_A 473 RAIKVVGTPAYEEMVRNC--MNQDLSWKGP 500 (536)
T ss_dssp HHHHHTTSHHHHHHHHHH--HHSCCSSHHH
T ss_pred HHHHhcCcHHHHHHHHHH--HHhcCCHHHH
Confidence 4444556677777765 4567888654
No 28
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=61.42 E-value=13 Score=36.37 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=54.8
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-ecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-DLPFNDILDWRKFAVILNERDVYQLKQILKNI--SD 365 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~ 365 (411)
.++...|+.|...+.+.| +. ..||+.+| +|||+.++. ..| +.++-. ..+.++. |..+|.+.+..+ .+
T Consensus 299 ~~~~~l~~~ad~vv~~SG-g~----~~EA~a~G-~PvV~~~~~~~~~--e~v~~G-~~~lv~~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 299 LPFVYLMDRAHIILTDSG-GI----QEEAPSLG-KPVLVMRETTERP--EAVAAG-TVKLVGT-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHCSEEEESCS-GG----GTTGGGGT-CCEEECCSSCSCH--HHHHHT-SEEECTT-CHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHhcCEEEECCc-cH----HHHHHHcC-CCEEEccCCCcch--HHHHcC-ceEEcCC-CHHHHHHHHHHHHcCH
Confidence 467789999999998886 22 27999999 599987432 112 233222 3455554 455555444443 45
Q ss_pred HHHHHHHHHHHHhhccceecCCCCCcCHHHHHHHHH
Q 015235 366 AEFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYEL 401 (411)
Q Consensus 366 ~~~~~mq~~l~~~~~~f~y~~~~~~~DAf~~il~~l 401 (411)
+...+|.++. . +-+.++|-.-|++.|
T Consensus 369 ~~~~~m~~~~----~------~~~~~~aa~ri~~~l 394 (396)
T 3dzc_A 369 QAYQAMSQAH----N------PYGDGKACQRIADIL 394 (396)
T ss_dssp HHHHHHHTSC----C------TTCCSCHHHHHHHHH
T ss_pred HHHHHHhhcc----C------CCcCChHHHHHHHHH
Confidence 5556665432 1 124467777666654
No 29
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.74 E-value=13 Score=35.83 Aligned_cols=81 Identities=17% Similarity=0.300 Sum_probs=53.5
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCC--C-------CCCCCcEEEEEcccCH--HHHHH
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFN--D-------ILDWRKFAVILNERDV--YQLKQ 358 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~--~-------~idw~~fsV~v~e~~~--~~l~~ 358 (411)
+..+.|..+..+++-.| ...+.|++.+|. |+|+-+ +|+. + .+--...++.++++++ .+|.+
T Consensus 245 dm~~~l~~aDlvI~raG----~~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~ 316 (365)
T 3s2u_A 245 DMAAAYAWADLVICRAG----ALTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAA 316 (365)
T ss_dssp CHHHHHHHCSEEEECCC----HHHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred hhhhhhccceEEEecCC----cchHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHH
Confidence 34578899999998776 345899999995 888633 2221 0 1234456888888764 34555
Q ss_pred HHhcC--CHHHHHHHHHHHHHh
Q 015235 359 ILKNI--SDAEFVSLHNNLVKV 378 (411)
Q Consensus 359 ~L~~i--~~~~~~~mq~~l~~~ 378 (411)
.|..+ .++.+.+|.++.+++
T Consensus 317 ~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 317 QLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHCCHHHHHHHHHHHHhc
Confidence 55554 467888898888765
No 30
>2ygg_A Sodium/hydrogen exchanger 1; metal binding protein-transport protein complex; HET: TAM; 2.23A {Homo sapiens}
Probab=58.96 E-value=12 Score=28.05 Aligned_cols=46 Identities=17% Similarity=0.254 Sum_probs=31.6
Q ss_pred CCHHHHHHHHHHH----HHhhcc-ceecCCCCCcCHHHHHHHHHHHHhhhc
Q 015235 363 ISDAEFVSLHNNL----VKVQKH-FQWNSPPVRFDAFHMVMYELWLRRHVI 408 (411)
Q Consensus 363 i~~~~~~~mq~~l----~~~~~~-f~y~~~~~~~DAf~~il~~l~~Rr~~~ 408 (411)
+++++.++||+-| -+++++ ..|+.-.-..|...--+.++.+||+..
T Consensus 4 ls~~~~e~ir~IL~~NLykiRqr~~SYnRHtL~~d~~e~q~~EiLiRr~~s 54 (70)
T 2ygg_A 4 LSKDKEEEIRKILRNNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKA 54 (70)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhccccccccCCCCchHHHHHHHHHHHHhh
Confidence 4555555555443 344444 447766778999999999999999854
No 31
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=56.04 E-value=7.1 Score=32.92 Aligned_cols=80 Identities=25% Similarity=0.300 Sum_probs=45.0
Q ss_pred cCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-ecCC-CCCCCCCcEEEEEccc--CHHHHHHHHhcCCHHHHHHH
Q 015235 296 YKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-DLPF-NDILDWRKFAVILNER--DVYQLKQILKNISDAEFVSL 371 (411)
Q Consensus 296 ~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-~lPf-~~~idw~~fsV~v~e~--~~~~l~~~L~~i~~~~~~~m 371 (411)
..+...++..|. ..+.||+.+| +|+|+.+.. +.+. .+.+......+.++.+ +..+|.+.++.+-.+ .+|
T Consensus 85 ~~ad~~I~~~G~----~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~ 157 (170)
T 2o6l_A 85 PKTRAFITHGGA----NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIND--PSY 157 (170)
T ss_dssp TTEEEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC--HHH
T ss_pred CCcCEEEEcCCc----cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcC--HHH
Confidence 677777776653 5699999999 788886531 0100 1113334567777765 445565555544211 136
Q ss_pred HHHHHHhhccc
Q 015235 372 HNNLVKVQKHF 382 (411)
Q Consensus 372 q~~l~~~~~~f 382 (411)
+++.+++.+.+
T Consensus 158 ~~~a~~~~~~~ 168 (170)
T 2o6l_A 158 KENVMKLSRIQ 168 (170)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHHHh
Confidence 77776665543
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=47.05 E-value=41 Score=31.68 Aligned_cols=76 Identities=11% Similarity=0.135 Sum_probs=44.9
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.+..+.|+.+...+.|.| .. +.||+.+|+ |||+.+..- -..++++- ...+.++ .|..+|.+.+..+ .++
T Consensus 266 ~~~~~~~~~ad~~v~~S~----g~-~lEA~a~G~-PvI~~~~~~-~~~~~~~~-g~g~lv~-~d~~~la~~i~~ll~d~~ 336 (376)
T 1v4v_A 266 GSMAALMRASLLLVTDSG----GL-QEEGAALGV-PVVVLRNVT-ERPEGLKA-GILKLAG-TDPEGVYRVVKGLLENPE 336 (376)
T ss_dssp HHHHHHHHTEEEEEESCH----HH-HHHHHHTTC-CEEECSSSC-SCHHHHHH-TSEEECC-SCHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHhCcEEEECCc----CH-HHHHHHcCC-CEEeccCCC-cchhhhcC-CceEECC-CCHHHHHHHHHHHHhChH
Confidence 356788899998888863 22 779999995 888765321 11122322 2345554 3666655555443 455
Q ss_pred HHHHHHH
Q 015235 367 EFVSLHN 373 (411)
Q Consensus 367 ~~~~mq~ 373 (411)
...+|.+
T Consensus 337 ~~~~~~~ 343 (376)
T 1v4v_A 337 ELSRMRK 343 (376)
T ss_dssp HHHHHHH
T ss_pred hhhhhcc
Confidence 6666654
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=42.85 E-value=41 Score=32.97 Aligned_cols=94 Identities=9% Similarity=0.090 Sum_probs=53.2
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhcC--CHH
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKNI--SDA 366 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~i--~~~ 366 (411)
.++...|+.|.+.+.+.| +. ..||+.+| +|||+.++.- -..+.++- ...+.++. +..+|.+.+..+ .++
T Consensus 293 ~~~~~l~~~ad~vv~~SG----g~-~~EA~a~g-~PvV~~~~~~-~~~e~v~~-g~~~lv~~-d~~~l~~ai~~ll~~~~ 363 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTDSG----GV-QEEAPGMG-VPVLVLRDTT-ERPEGIEA-GTLKLIGT-NKENLIKEALDLLDNKE 363 (403)
T ss_dssp HHHHHHHHHEEEEEECCH----HH-HHHGGGTT-CCEEECCSSC-SCHHHHHH-TSEEECCS-CHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhcCEEEECCc----cH-HHHHHHhC-CCEEEecCCC-cchhheeC-CcEEEcCC-CHHHHHHHHHHHHcCHH
Confidence 468889999999887754 11 27999999 6999874321 01122322 23444543 555555444433 456
Q ss_pred HHHHHHHHHHHhhccceecCCCCCcCHHHHHHHHH
Q 015235 367 EFVSLHNNLVKVQKHFQWNSPPVRFDAFHMVMYEL 401 (411)
Q Consensus 367 ~~~~mq~~l~~~~~~f~y~~~~~~~DAf~~il~~l 401 (411)
...+|.++. .. | +.++|-.-|++.|
T Consensus 364 ~~~~m~~~~----~~--~----g~~~aa~rI~~~l 388 (403)
T 3ot5_A 364 SHDKMAQAA----NP--Y----GDGFAANRILAAI 388 (403)
T ss_dssp HHHHHHHSC----CT--T----CCSCHHHHHHHHH
T ss_pred HHHHHHhhc----Cc--c----cCCcHHHHHHHHH
Confidence 666665431 11 2 3467777666655
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=32.66 E-value=21 Score=34.16 Aligned_cols=86 Identities=10% Similarity=0.047 Sum_probs=50.7
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-ecCC-CCCCCCCcEEEEEccc--CHHHHHHHHhcC--
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-DLPF-NDILDWRKFAVILNER--DVYQLKQILKNI-- 363 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-~lPf-~~~idw~~fsV~v~e~--~~~~l~~~L~~i-- 363 (411)
+..+.|..+..++++.|. .-+.||+.+| +|||+.+.. ..+. .+.+.-....+.++.. +..+|.+.++.+
T Consensus 301 ~~~~~l~~ad~~v~~~g~----~t~~Ea~a~G-~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~ 375 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS----GTTLGALGAG-VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLA 375 (412)
T ss_dssp CHHHHGGGCSEEEESCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHH
T ss_pred CHHHHHhcCcEEEECCch----HHHHHHHHhC-CCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHh
Confidence 466789999988888764 3589999999 698884321 0000 0112223456667665 555555555444
Q ss_pred CHHHHHHHHHHHHHhhc
Q 015235 364 SDAEFVSLHNNLVKVQK 380 (411)
Q Consensus 364 ~~~~~~~mq~~l~~~~~ 380 (411)
.++...+|.+..+++..
T Consensus 376 ~~~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 376 EESYRAGARAVAAEIAA 392 (412)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 34555566555555443
No 35
>3s8f_C Cytochrome C oxidase polypeptide 2A; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 2qpd_C* 2qpe_C* 3bvd_C* 3qjq_C* 3qjr_C* 3qjs_C* 3qjt_C* 3qju_C* 3qjv_C* 1xme_C* 3s8g_C* 4esl_C* 4ev3_C* 4f05_C* 4fa7_C* 4faa_C* 1ehk_C* 3eh3_C* 3eh4_C* 3eh5_C* ...
Probab=29.39 E-value=43 Score=21.52 Aligned_cols=21 Identities=14% Similarity=0.200 Sum_probs=16.8
Q ss_pred cchhhHHHHHHHHHHHHHhhh
Q 015235 18 SLRSSLLTLALVTLLCFTCLS 38 (411)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~ 38 (411)
|++|++..+.+|++..+.+|-
T Consensus 4 ~l~GTl~~V~ilg~~I~i~W~ 24 (34)
T 3s8f_C 4 KPKGALAVILVLTLTILVFWL 24 (34)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccceehHHHHHHHHHHHHHH
Confidence 689999888888887776664
No 36
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=28.62 E-value=49 Score=31.88 Aligned_cols=81 Identities=12% Similarity=0.066 Sum_probs=45.6
Q ss_pred HhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-ecCC-CCCCCCCcEEEEEccc--CHHHHHHHHhcC--CH
Q 015235 292 QRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-DLPF-NDILDWRKFAVILNER--DVYQLKQILKNI--SD 365 (411)
Q Consensus 292 ~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-~lPf-~~~idw~~fsV~v~e~--~~~~l~~~L~~i--~~ 365 (411)
.+.|..+...++..|. ..+.||+.+| +|||+.+.. +.++ .+.+......+.++.+ +..+|.+.++.+ .+
T Consensus 294 ~~~l~~ad~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~~ 368 (430)
T 2iyf_A 294 LAILRQADLFVTHAGA----GGSQEGLATA-TPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDP 368 (430)
T ss_dssp HHHHTTCSEEEECCCH----HHHHHHHHTT-CCEEECCCSHHHHHHHHHHHHTTSEEECCCC-CCHHHHHHHHHHHHHCH
T ss_pred HHHhhccCEEEECCCc----cHHHHHHHhC-CCEEECCCccchHHHHHHHHHcCCEEEcCCCCCCHHHHHHHHHHHHcCH
Confidence 3678888877776663 4599999999 788876431 1111 0112223456777655 445555555444 34
Q ss_pred HHHHHHHHHHHH
Q 015235 366 AEFVSLHNNLVK 377 (411)
Q Consensus 366 ~~~~~mq~~l~~ 377 (411)
+...+|++..++
T Consensus 369 ~~~~~~~~~~~~ 380 (430)
T 2iyf_A 369 EVARRLRRIQAE 380 (430)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444455444433
No 37
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=27.15 E-value=1.3e+02 Score=28.40 Aligned_cols=83 Identities=11% Similarity=0.185 Sum_probs=48.7
Q ss_pred hHHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCc-eecCCC---CCCCCCcEEEEEcccC--HHHHHHHHhcC
Q 015235 290 VYQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNY-YDLPFN---DILDWRKFAVILNERD--VYQLKQILKNI 363 (411)
Q Consensus 290 ~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~-~~lPf~---~~idw~~fsV~v~e~~--~~~l~~~L~~i 363 (411)
+..+.|..+.-.++..|. ..+.||+.+| +|||+-+. ...+.. +.+......+.++..+ ...|.++|.
T Consensus 292 ~~~~ll~~ad~~v~~~G~----~t~~Eal~~G-~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~~ll~-- 364 (398)
T 3oti_A 292 PLHTLLRTCTAVVHHGGG----GTVMTAIDAG-IPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLRRLIG-- 364 (398)
T ss_dssp CHHHHHTTCSEEEECCCH----HHHHHHHHHT-CCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHHHHHH--
T ss_pred CHHHHHhhCCEEEECCCH----HHHHHHHHhC-CCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHHHHHc--
Confidence 466788889888877664 3589999999 68887432 111211 1122234567777653 445665554
Q ss_pred CHHHHHHHHHHHHHhh
Q 015235 364 SDAEFVSLHNNLVKVQ 379 (411)
Q Consensus 364 ~~~~~~~mq~~l~~~~ 379 (411)
.++..++|++..+++.
T Consensus 365 ~~~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 365 DESLRTAAREVREEMV 380 (398)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 3444555555554443
No 38
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=23.99 E-value=73 Score=22.66 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=29.7
Q ss_pred CcEEEEEcccCHHHHHHHHhcCCH-HHHHHHHHHHHHhhc
Q 015235 342 RKFAVILNERDVYQLKQILKNISD-AEFVSLHNNLVKVQK 380 (411)
Q Consensus 342 ~~fsV~v~e~~~~~l~~~L~~i~~-~~~~~mq~~l~~~~~ 380 (411)
.+-.+.|..+|.++|-++|+++|. ..-+.+|+.+++..+
T Consensus 25 tkhllkikkedypqifdflenvprgtktahirealrryie 64 (70)
T 2q2k_A 25 TKHLLKIKKEDYPQIFDFLENVPRGTKTAHIREALRRYIE 64 (70)
T ss_dssp EEEEEEEETTTSHHHHHHHTTSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhchHHHHHHHcCCCccchHHHHHHHHHHHH
Confidence 466788999999999999999984 345566666766544
No 39
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=23.22 E-value=1e+02 Score=31.55 Aligned_cols=85 Identities=11% Similarity=0.052 Sum_probs=52.2
Q ss_pred hhHHhhccCceEEeecCCCCCCchhHHHHHhhC--ceeEEEeCceecCCCCCCCCCcEEEEEcccCHHHHHHHHhc---C
Q 015235 289 LVYQRRFYKTKFCICPGGSQVNSARIADSIHYG--CVPVILSNYYDLPFNDILDWRKFAVILNERDVYQLKQILKN---I 363 (411)
Q Consensus 289 ~~y~~~~~~S~FCL~p~G~~~~s~rl~dai~~G--CIPVii~d~~~lPf~~~idw~~fsV~v~e~~~~~l~~~L~~---i 363 (411)
.++...++.+.-|++|.=.....--..|||++| --|||+++.-=. .+++ .+-++.|+..|...+.+.|.. .
T Consensus 363 ~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa--~~~l--~~~allVnP~D~~~lA~AI~~aL~m 438 (496)
T 3t5t_A 363 NHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA--AEVL--GEYCRSVNPFDLVEQAEAISAALAA 438 (496)
T ss_dssp HHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT--HHHH--GGGSEEECTTBHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC--HHHh--CCCEEEECCCCHHHHHHHHHHHHcC
Confidence 456778889999999874444456689999986 346777763110 0111 123678888888776554433 3
Q ss_pred CHHHHHHHHHHHHH
Q 015235 364 SDAEFVSLHNNLVK 377 (411)
Q Consensus 364 ~~~~~~~mq~~l~~ 377 (411)
|+++..++.+++.+
T Consensus 439 ~~~er~~r~~~~~~ 452 (496)
T 3t5t_A 439 GPRQRAEAAARRRD 452 (496)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 65555555555544
No 40
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=20.85 E-value=60 Score=31.33 Aligned_cols=84 Identities=19% Similarity=0.154 Sum_probs=50.1
Q ss_pred HHhhccCceEEeecCCCCCCchhHHHHHhhCceeEEEeCce-ecCCC-CCCCCCcEEEEEccc--CHHHHHHHHhcCCHH
Q 015235 291 YQRRFYKTKFCICPGGSQVNSARIADSIHYGCVPVILSNYY-DLPFN-DILDWRKFAVILNER--DVYQLKQILKNISDA 366 (411)
Q Consensus 291 y~~~~~~S~FCL~p~G~~~~s~rl~dai~~GCIPVii~d~~-~lPf~-~~idw~~fsV~v~e~--~~~~l~~~L~~i~~~ 366 (411)
..+.|.++...++..|. ..+.||+.+| +|+|+-+.. +.++. ..+......+.++.+ +..+|.+.++.+ .+
T Consensus 295 ~~~~l~~~d~~v~~~G~----~t~~Ea~~~G-~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~ 368 (415)
T 1iir_A 295 HQVLFGRVAAVIHHGGA----GTTHVAARAG-APQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA-LT 368 (415)
T ss_dssp HHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS
T ss_pred hHHHHhhCCEEEeCCCh----hHHHHHHHcC-CCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC
Confidence 45678999999987765 4599999999 788875421 01110 113334566777654 345677777666 22
Q ss_pred HHHHHHHHHHHhhccc
Q 015235 367 EFVSLHNNLVKVQKHF 382 (411)
Q Consensus 367 ~~~~mq~~l~~~~~~f 382 (411)
.+++++.+++.+.+
T Consensus 369 --~~~~~~~~~~~~~~ 382 (415)
T 1iir_A 369 --PETHARATAVAGTI 382 (415)
T ss_dssp --HHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHHHHH
Confidence 23455555555444
No 41
>2xze_Q Charged multivesicular BODY protein 3; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=20.69 E-value=63 Score=21.52 Aligned_cols=15 Identities=7% Similarity=0.370 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHhh
Q 015235 365 DAEFVSLHNNLVKVQ 379 (411)
Q Consensus 365 ~~~~~~mq~~l~~~~ 379 (411)
++++.+||.+|.-++
T Consensus 25 Eedi~~MqsRLaALR 39 (40)
T 2xze_Q 25 EEALEAMQSRLATLR 39 (40)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhc
Confidence 356889999998664
Done!