Query 015238
Match_columns 411
No_of_seqs 244 out of 1767
Neff 7.1
Searched_HMMs 13730
Date Mon Mar 25 09:06:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015238.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015238hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2heka1 a.211.1.1 (A:1-369) Hy 13.4 37 0.0027 29.9 2.1 17 170-186 78-94 (369)
2 d2o6ia1 a.211.1.1 (A:1-453) Hy 10.7 42 0.003 31.2 1.5 15 171-185 105-119 (453)
3 g1h8d.1 b.47.1.2 (L:,H:) Throm 7.5 55 0.004 27.4 0.8 9 7-15 2-10 (289)
4 d1my6a1 a.2.11.1 (A:1-88) Fe s 5.5 1.2E+02 0.0084 21.2 1.5 18 200-217 16-33 (88)
5 d1h8ba_ a.39.1.7 (A:) alpha-Ac 3.9 1.8E+02 0.013 19.7 1.5 17 105-121 20-36 (73)
6 d2nyba1 a.2.11.1 (A:1-82) Fe s 3.0 2.2E+02 0.016 19.5 1.3 15 203-217 18-32 (82)
7 d1twfl_ g.41.9.2 (L:) RBP12 su 3.0 2.3E+02 0.017 17.4 1.2 14 175-188 24-37 (46)
8 d2i47a1 d.92.1.10 (A:220-473) 2.9 1.4E+02 0.0098 24.5 -0.1 10 172-181 182-191 (254)
9 d1mnga1 a.2.11.1 (A:1-92) Mn s 2.7 2.4E+02 0.018 19.6 1.3 16 202-217 19-34 (92)
10 d1coja1 a.2.11.1 (A:2-90) Fe s 2.7 2.6E+02 0.019 19.1 1.4 16 202-217 17-32 (89)
No 1
>d2heka1 a.211.1.1 (A:1-369) Hypothetical protein aq_1910 {Aquifex aeolicus [TaxId: 63363]}
Probab=13.37 E-value=37 Score=29.87 Aligned_cols=17 Identities=47% Similarity=0.561 Sum_probs=13.5
Q ss_pred HHhhhhccccCCCCcCC
Q 015238 170 ALFVLGHDCGHGSFSND 186 (411)
Q Consensus 170 ~l~~l~HDa~H~s~~~~ 186 (411)
.+..|.||.||+.|+..
T Consensus 78 ~~A~LlHDiGh~PFsH~ 94 (369)
T d2heka1 78 KLAGLLHDLGHPPFSHT 94 (369)
T ss_dssp HHHHHTTTTTCCSSSSC
T ss_pred HHHHHHhhcccchhhhh
Confidence 34468999999999863
No 2
>d2o6ia1 a.211.1.1 (A:1-453) Hypothetical protein EF1143 {Enterococcus faecalis [TaxId: 1351]}
Probab=10.66 E-value=42 Score=31.18 Aligned_cols=15 Identities=47% Similarity=0.771 Sum_probs=12.2
Q ss_pred HhhhhccccCCCCcC
Q 015238 171 LFVLGHDCGHGSFSN 185 (411)
Q Consensus 171 l~~l~HDa~H~s~~~ 185 (411)
+..|.||-||+.||.
T Consensus 105 ~AaLlHDiGHgPfSH 119 (453)
T d2o6ia1 105 CAALLHDVGHGPYSH 119 (453)
T ss_dssp HHHHHTTTTCCTTHH
T ss_pred HHHHHhccCcccccc
Confidence 345889999999975
No 3
>g1h8d.1 b.47.1.2 (L:,H:) Thrombin {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.47 E-value=55 Score=27.44 Aligned_cols=9 Identities=56% Similarity=1.346 Sum_probs=7.0
Q ss_pred cccCCCCCC
Q 015238 7 SECGLKPLP 15 (411)
Q Consensus 7 ~~~~~~~~~ 15 (411)
+|||+||+-
T Consensus 2 ~~~~~~~~~ 10 (289)
T g1h8d.1 2 ADCGLRPLF 10 (289)
T ss_dssp CC-CCCTTT
T ss_pred CccccCccc
Confidence 799999985
No 4
>d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD) {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.45 E-value=1.2e+02 Score=21.24 Aligned_cols=18 Identities=11% Similarity=0.104 Sum_probs=15.0
Q ss_pred hccCChHHhHHHHhhhcc
Q 015238 200 SILVPYHGWRISHRTHHQ 217 (411)
Q Consensus 200 ~~g~p~~~wr~~H~~HH~ 217 (411)
|.+++.+.-+..|.+||+
T Consensus 16 P~~Is~~tm~~Hh~kHH~ 33 (88)
T d1my6a1 16 PYGMSAKTLEFHYGKHHK 33 (88)
T ss_dssp GGTCCHHHHHHHHHTHHH
T ss_pred ccccCHHHHHHHHHHHHH
Confidence 446788899999999997
No 5
>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.89 E-value=1.8e+02 Score=19.71 Aligned_cols=17 Identities=18% Similarity=0.415 Sum_probs=14.2
Q ss_pred CCCCCCHHHHHHHcccc
Q 015238 105 APPPFKLADIRAAIPKH 121 (411)
Q Consensus 105 ~~~~~~l~~ir~~lpk~ 121 (411)
..|++|-.|||+.++++
T Consensus 20 ~KpyVT~~dL~~~L~pe 36 (73)
T d1h8ba_ 20 DKPYILAEELRRELPPD 36 (73)
T ss_dssp SCSSBCHHHHHHHSCHH
T ss_pred CCCeeCHHHHHhhcCHH
Confidence 47889999999999854
No 6
>d2nyba1 a.2.11.1 (A:1-82) Fe superoxide dismutase (FeSOD) {Escherichia coli [TaxId: 562]}
Probab=3.01 E-value=2.2e+02 Score=19.47 Aligned_cols=15 Identities=20% Similarity=0.222 Sum_probs=12.6
Q ss_pred CChHHhHHHHhhhcc
Q 015238 203 VPYHGWRISHRTHHQ 217 (411)
Q Consensus 203 ~p~~~wr~~H~~HH~ 217 (411)
++.+.-+..|.+||+
T Consensus 18 Is~~tm~~Hh~KHH~ 32 (82)
T d2nyba1 18 ISAETIEYHYGKHHQ 32 (82)
T ss_dssp SCHHHHHHHHHTHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 667788889999997
No 7
>d1twfl_ g.41.9.2 (L:) RBP12 subunit of RNA polymerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.97 E-value=2.3e+02 Score=17.45 Aligned_cols=14 Identities=29% Similarity=0.612 Sum_probs=9.6
Q ss_pred hccccCCCCcCCCh
Q 015238 175 GHDCGHGSFSNDHK 188 (411)
Q Consensus 175 ~HDa~H~s~~~~~~ 188 (411)
-.||||..+.|.+.
T Consensus 24 CreCG~RIlYK~RT 37 (46)
T d1twfl_ 24 CKDCGHRILLKART 37 (46)
T ss_dssp CSSSCCCCCBCCCC
T ss_pred eccCCcEEEEeecc
Confidence 35788888877553
No 8
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.90 E-value=1.4e+02 Score=24.49 Aligned_cols=10 Identities=40% Similarity=0.773 Sum_probs=5.6
Q ss_pred hhhhccccCC
Q 015238 172 FVLGHDCGHG 181 (411)
Q Consensus 172 ~~l~HDa~H~ 181 (411)
++++||.||.
T Consensus 182 ~~~AHElGH~ 191 (254)
T d2i47a1 182 LVTTHELGHN 191 (254)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 3566775554
No 9
>d1mnga1 a.2.11.1 (A:1-92) Mn superoxide dismutase (MnSOD) {Thermus thermophilus [TaxId: 274]}
Probab=2.74 E-value=2.4e+02 Score=19.60 Aligned_cols=16 Identities=25% Similarity=0.410 Sum_probs=13.2
Q ss_pred cCChHHhHHHHhhhcc
Q 015238 202 LVPYHGWRISHRTHHQ 217 (411)
Q Consensus 202 g~p~~~wr~~H~~HH~ 217 (411)
.++.+.-+..|.+||+
T Consensus 19 ~Is~~Tm~~Hh~KHH~ 34 (92)
T d1mnga1 19 HIDAKTMEIHHQKHHG 34 (92)
T ss_dssp TSCHHHHHHHHHTHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 3677888889999997
No 10
>d1coja1 a.2.11.1 (A:2-90) Fe superoxide dismutase (FeSOD) {Aquifex pyrophilus [TaxId: 2714]}
Probab=2.66 E-value=2.6e+02 Score=19.12 Aligned_cols=16 Identities=6% Similarity=-0.016 Sum_probs=13.9
Q ss_pred cCChHHhHHHHhhhcc
Q 015238 202 LVPYHGWRISHRTHHQ 217 (411)
Q Consensus 202 g~p~~~wr~~H~~HH~ 217 (411)
|++-..-+..|..||+
T Consensus 17 gIs~~tm~~H~~kHh~ 32 (89)
T d1coja1 17 GISNEQIEPHFEAHYK 32 (89)
T ss_dssp SSCHHHHHHHHHTHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 6888899988899997
Done!