BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015242
(411 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQ 306
L + KI +GS+ +++ + DVA+K+L + + EF +EV IM+++RH N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 307 FIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRVAIDVSKGMNYLHRNN- 363
F+GA T+PP L IVTE++S GS+Y LHK +L L +A DV+KGMNYLH N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 364 -IIHRDLKAANLLMNE 378
I+HRDLK+ NLL+++
Sbjct: 159 PIVHRDLKSPNLLVDK 174
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
Query: 233 PAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFA 290
P+ D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 61
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVA 349
+E +M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 121
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+S M YL + N IHRDL A N L+ EN
Sbjct: 122 TQISSAMEYLEKKNFIHRDLAARNCLVGEN 151
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 89/136 (65%), Gaps = 4/136 (2%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQ 306
L + KI +GS+ +++ + DVA+K+L + + EF +EV IM+++RH N+V
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 307 FIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRVAIDVSKGMNYLHRNN- 363
F+GA T+PP L IVTE++S GS+Y LHK +L L +A DV+KGMNYLH N
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP 158
Query: 364 -IIHRDLKAANLLMNE 378
I+HR+LK+ NLL+++
Sbjct: 159 PIVHRNLKSPNLLVDK 174
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 237 IDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVH 294
+D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAA 59
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVS 353
+M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 67
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 63
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGEN 148
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 67
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 64
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 64
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 75
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGEN 160
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 67
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 67
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 64
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGEN 149
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 90/150 (60%), Gaps = 6/150 (4%)
Query: 233 PAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFA 290
P+ D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 58
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVA 349
+E +M++++H N+VQ +G CTR P +I+ EFM+ G++ DYL + + + +LL +A
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 118
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+S M YL + N IHRDL A N L+ EN
Sbjct: 119 TQISSAMEYLEKKNFIHRDLAARNCLVGEN 148
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 90/146 (61%), Gaps = 6/146 (4%)
Query: 237 IDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVH 294
+D WE++ + + +HK+ G + ++Y+G + +S VA+K L + + EF +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAA 59
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVS 353
+M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 19/181 (10%)
Query: 212 HHHVV----------YPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDL 261
HHH YP ++ + I V + D WE++ + + +HK+ G Y ++
Sbjct: 180 HHHSTVADGLITTLHYPAPKRNKPTIYGV---SPNYDKWEMERTDITMKHKLGGGQYGEV 236
Query: 262 YKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFI 319
Y+G + +S VA+K L + + EF +E +M++++H N+VQ +G CTR P +I
Sbjct: 237 YEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293
Query: 320 VTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
+TEFM+ G++ DYL + + + +LL +A +S M YL + N IHR+L A N L+ E
Sbjct: 294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE 353
Query: 379 N 379
N
Sbjct: 354 N 354
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 89/146 (60%), Gaps = 6/146 (4%)
Query: 237 IDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVH 294
+D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAA 59
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVS 353
+M++++H N+VQ +G CTR P +I+ EFM+ G++ DYL + + + +LL +A +S
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 119
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 120 SAMEYLEKKNFIHRDLAARNCLVGEN 145
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 266
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHR+L A N L+ EN
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGEN 351
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+ EFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+ EFM+ G++ DYL + + + +LL +A +S
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGEN 147
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 88/145 (60%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 67
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+ EFM+ G++ DYL + + + +LL +A +S
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHRDL A N L+ EN
Sbjct: 128 AMEYLEKKNFIHRDLAARNCLVGEN 152
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 89/145 (61%), Gaps = 6/145 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
D WE++ + + +HK+ G Y ++Y+G + +S VA+K L + + EF +E +
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAV 308
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSK 354
M++++H N+VQ +G CTR P +I+TEFM+ G++ DYL + + + +LL +A +S
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
M YL + N IHR+L A N L+ EN
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGEN 393
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 92/156 (58%), Gaps = 10/156 (6%)
Query: 231 NIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRRE 288
N+ + +D WE++ + + +HK+ G Y ++Y G + +S VA+K L + + E
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEE 74
Query: 289 FAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG---LKLPLL 345
F +E +M++++H N+VQ +G CT P +IVTE+M G++ DYL ++C + +L
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVL 132
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L +A +S M YL + N IHRDL A N L+ EN V
Sbjct: 133 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHV 168
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 63
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 64 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 122
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHED 144
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 75
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 76 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD 134
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 135 YLHAKSIIHRDLKSNNIFLHED 156
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 87/145 (60%), Gaps = 2/145 (1%)
Query: 235 EGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVH 294
+ D WEI + +I SGS+ +YKG + DVA+K+L + F EV
Sbjct: 14 DAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
++RK RH+N++ F+G T P+L IVT++ G S+Y +LH + ++ L+ +A ++
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
GM+YLH +IIHRDLK+ N+ ++E+
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFLHED 156
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
WEI+AS + +I SGS+ +YKG + DVA+K+L + F EV ++RK
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
RH+N++ F+G T+ L IVT++ G S+Y +LH Q+ ++ L+ +A ++GM+YL
Sbjct: 90 RHVNILLFMGYMTKD-NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 360 HRNNIIHRDLKAANLLMNEN 379
H NIIHRD+K+ N+ ++E
Sbjct: 149 HAKNIIHRDMKSNNIFLHEG 168
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 65 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHED 145
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHED 140
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 64
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 65 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 123
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 124 YLHAKSIIHRDLKSNNIFLHED 145
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKIRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 61
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 62 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 120
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 121 YLHAKSIIHRDLKSNNIFLHED 142
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHED 140
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 79
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 80 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 138
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 139 YLHAKSIIHRDLKSNNIFLHED 160
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHED 168
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 87
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 88 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 146
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 147 YLHAKSIIHRDLKSNNIFLHED 168
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 87/142 (61%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 86
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T+P +L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 87 KTRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 145
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 146 YLHAKSIIHRDLKSNNIFLHED 167
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 95/169 (56%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 316
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 317 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 374
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 375 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 407
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 60
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 61 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 118
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 119 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 151
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 291
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 324
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L +++ F QE +M
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA---FLQEAQVM 234
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 235 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIAS 292
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 293 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 325
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 291
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 324
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI + +I SGS+ +YKG + DVA+K+L + F EV ++R
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLR 59
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K RH+N++ F+G T P+L IVT++ G S+Y +LH + ++ L+ +A ++GM+
Sbjct: 60 KTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118
Query: 358 YLHRNNIIHRDLKAANLLMNEN 379
YLH +IIHRDLK+ N+ ++E+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHED 140
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 58
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 59 KKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIAS 116
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 117 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 149
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLV------CKVADF 158
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 57
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P + IVTE+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 58 KKLRHEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 115
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 148
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IVTE+MS G + D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IV E+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IV E+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 94/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IV E+MS GS+ D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 233
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IV E+MS GS+ D+L K + G L+LP L+ +A ++
Sbjct: 234 KKLRHEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFL-KGETGKYLRLPQLVDMAAQIAS 291
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 292 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 324
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+M+ GS+ D+L K + G L+LP L+ ++ ++
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIAS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 155
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVM 64
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSK 354
+K+RH +VQ + P ++IVTE+M+ GS+ D+L K + G L+LP L+ ++ ++
Sbjct: 65 KKLRHEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFL-KGETGKYLRLPQLVDMSAQIAS 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 123 GMAYVERMNYVHRDLRAANILVGENLV------CKVADF 155
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 92/158 (58%), Gaps = 14/158 (8%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
WEI L+ E K+ G + +++ G + + VAIK L ++ F QE +M+
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA---FLQEAQVMK 57
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKG 355
K+RH +VQ + P ++IVTE+MS GS+ D+L K + G L+LP L+ +A ++ G
Sbjct: 58 KLRHEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFL-KGEMGKYLRLPQLVDMAAQIASG 115
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLV------CKVADF 147
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 14/169 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIR 286
H+ D WEI L+ E K+ G + +++ G + + VAIK L ++
Sbjct: 1 GHMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA- 59
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPL 344
F QE +M+K+RH +VQ + P ++IV E+MS G + D+L K + G L+LP
Sbjct: 60 --FLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFL-KGEMGKYLRLPQ 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
L+ +A ++ GM Y+ R N +HRDL+AAN+L+ EN V C +++F
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV------CKVADF 158
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 218 PVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVL 276
P+G + N + G WEID L F ++ +G + + G + Q DVAIK++
Sbjct: 2 PLGSK-----NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI 56
Query: 277 TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ 336
++E+ EF +E +M + H +VQ G CT+ +FI+TE+M+ G + +YL +
Sbjct: 57 KEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 337 KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ + LL + DV + M YL +HRDL A N L+N+ GV
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV 158
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 218 PVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVL 276
P+G + N + G WEID L F ++ +G + + G + Q DVAIK++
Sbjct: 2 PLGSK-----NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI 56
Query: 277 TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ 336
++E+ EF +E +M + H +VQ G CT+ +FI+TE+M+ G + +YL +
Sbjct: 57 KEGSMSED---EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM 113
Query: 337 KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ + LL + DV + M YL +HRDL A N L+N+ GV
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGV 158
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 81/147 (55%), Gaps = 4/147 (2%)
Query: 236 GIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVH 294
G WEID L F ++ +G + + G + Q DVAIK++ ++E+ EF +E
Sbjct: 6 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAK 62
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
+M + H +VQ G CT+ +FI+TE+M+ G + +YL + + + LL + DV +
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGV 381
M YL +HRDL A N L+N+ GV
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGV 149
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRK 298
W ID S L F +I SG + ++ G + ++D VAIK + ++E +F +E +M K
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMK 59
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
+ H +VQ G C + +VTEFM G + DYL Q+ LL + +DV +GM Y
Sbjct: 60 LSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAY 119
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
L +IHRDL A N L+ EN V
Sbjct: 120 LEEACVIHRDLAARNCLVGENQV 142
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRK 298
WEID L F ++ +G + + G + Q DVAIK++ ++E+ EF +E +M
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 59
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
+ H +VQ G CT+ +FI+TE+M+ G + +YL + + + LL + DV + M Y
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 119
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
L +HRDL A N L+N+ GV
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGV 142
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRK 298
WEID L F ++ +G + + G + Q DVAIK++ ++E+ EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
+ H +VQ G CT+ +FI+TE+M+ G + +YL + + + LL + DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
L +HRDL A N L+N+ GV
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGV 143
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRK 298
WEID L F ++ +G + + G + Q DVAIK++ ++E+ EF +E +M
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMN 60
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
+ H +VQ G CT+ +FI+TE+M+ G + +YL + + + LL + DV + M Y
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEY 120
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
L +HRDL A N L+N+ GV
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGV 143
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
W+I L+ I G + +Y G + +VAI+++ E NE+ + F +EV R+
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQT 86
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
RH NVV F+GAC PP L I+T G ++Y + K L + ++A ++ KGM YL
Sbjct: 87 RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 360 HRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNFLSISTVI 400
H I+H+DLK+ N+ + V +D SIS V+
Sbjct: 147 HAKGILHKDLKSKNVFYDNGKVVITDF-----GLFSISGVL 182
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 236 GIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVH 294
G W ID S L F +I SG + ++ G + ++D VAIK + ++E +F +E
Sbjct: 1 GSGKWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAE 57
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
+M K+ H +VQ G C + +V EFM G + DYL Q+ LL + +DV +
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 117
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGV 381
GM YL +IHRDL A N L+ EN V
Sbjct: 118 GMAYLEEACVIHRDLAARNCLVGENQV 144
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 12/158 (7%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
DVWEI L+ ++ +G + +++ G + + VAIK L ++ F +E IM
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP---ESFLEEAQIM 58
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKG 355
+K++H +VQ + P ++IVTE+M+ GS+ D+L + LKLP L+ +A V+ G
Sbjct: 59 KKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAG 117
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M Y+ R N IHRDL++AN+L+ NG + C +++F
Sbjct: 118 MAYIERMNYIHRDLRSANILVG-NG-----LICKIADF 149
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
ID S L F +I SG + ++ G + ++D VAIK + ++E+ +F +E +M K+
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED---DFIEEAEVMMKLS 80
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H +VQ G C + +V EFM G + DYL Q+ LL + +DV +GM YL
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 361 RNNIIHRDLKAANLLMNENGV 381
+IHRDL A N L+ EN V
Sbjct: 141 EACVIHRDLAARNCLVGENQV 161
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
ID S L F +I SG + ++ G + ++D VAIK + ++E +F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 60
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H +VQ G C + +V EFM G + DYL Q+ LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 361 RNNIIHRDLKAANLLMNENGV 381
++IHRDL A N L+ EN V
Sbjct: 121 EASVIHRDLAARNCLVGENQV 141
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI +K ++ +G + +++ G + S VA+K L ++ + F +E ++M
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKG 355
+ ++H +V+ TR ++I+TE+M+ GS+ D+L + G + LP L+ + +++G
Sbjct: 63 KTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEG 122
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M Y+ R N IHRDL+AAN+L++E+ + C +++F
Sbjct: 123 MAYIERKNYIHRDLRAANVLVSES------LMCKIADF 154
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
ID S L F +I SG + ++ G + ++D VAIK + ++E +F +E +M K+
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 58
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H +VQ G C + +V EFM G + DYL Q+ LL + +DV +GM YL
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 361 RNNIIHRDLKAANLLMNENGV 381
+IHRDL A N L+ EN V
Sbjct: 119 EACVIHRDLAARNCLVGENQV 139
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
ID S L F +I SG + ++ G + ++D VAIK + ++E +F +E +M K+
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS 60
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H +VQ G C + +V EFM G + DYL Q+ LL + +DV +GM YL
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 361 RNNIIHRDLKAANLLMNENGV 381
+IHRDL A N L+ EN V
Sbjct: 121 EACVIHRDLAARNCLVGENQV 141
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
WEI +K K+ +G + +++ G + S VA+K L ++ + F +E ++M+
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS---VQAFLEEANLMK 62
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGM 356
++H +V+ T+ ++I+TEFM+ GS+ D+L + G + LP L+ + +++GM
Sbjct: 63 TLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM 122
Query: 357 NYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
Y+ R N IHRDL+AAN+L++E+ + C +++F
Sbjct: 123 AYIERKNYIHRDLRAANVLVSES------LMCKIADF 153
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
ID L F ++ +G + + G + Q DVAIK++ ++E+ EF +E +M +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED---EFIEEAKVMMNLS 57
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H +VQ G CT+ +FI+TE+M+ G + +YL + + + LL + DV + M YL
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117
Query: 361 RNNIIHRDLKAANLLMNENGV 381
+HRDL A N L+N+ GV
Sbjct: 118 SKQFLHRDLAARNCLVNDQGV 138
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
W ++ LK I G + D+ G + VA+K + N+ + F E +M ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQL 56
Query: 300 RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMN 357
RH N+VQ +G L+IVTE+M+ GS+ DYL + + L LL+ ++DV + M
Sbjct: 57 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 116
Query: 358 YLHRNNIIHRDLKAANLLMNENGV 381
YL NN +HRDL A N+L++E+ V
Sbjct: 117 YLEGNNFVHRDLAARNVLVSEDNV 140
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
W ++ LK I G + D+ G + VA+K + N+ + F E +M ++
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQL 71
Query: 300 RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMN 357
RH N+VQ +G L+IVTE+M+ GS+ DYL + + L LL+ ++DV + M
Sbjct: 72 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 131
Query: 358 YLHRNNIIHRDLKAANLLMNENGV 381
YL NN +HRDL A N+L++E+ V
Sbjct: 132 YLEGNNFVHRDLAARNVLVSEDNV 155
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
W ++ LK I G + D+ G + VA+K + N+ + F E +M ++
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND----ATAQAFLAEASVMTQL 243
Query: 300 RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMN 357
RH N+VQ +G L+IVTE+M+ GS+ DYL + + L LL+ ++DV + M
Sbjct: 244 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 303
Query: 358 YLHRNNIIHRDLKAANLLMNENGV 381
YL NN +HRDL A N+L++E+ V
Sbjct: 304 YLEGNNFVHRDLAARNVLVSEDNV 327
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV 299
W ++ LK I G + D+ G + VA+K + N+ + F E +M ++
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----TAQAFLAEASVMTQL 62
Query: 300 RHMNVVQFIGACTR-PPRLFIVTEFMSGGSIYDYLH-KQKCGLKLPLLLRVAIDVSKGMN 357
RH N+VQ +G L+IVTE+M+ GS+ DYL + + L LL+ ++DV + M
Sbjct: 63 RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 122
Query: 358 YLHRNNIIHRDLKAANLLMNENGV 381
YL NN +HRDL A N+L++E+ V
Sbjct: 123 YLEGNNFVHRDLAARNVLVSEDNV 146
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIM 296
D W ++ L +I G++ +++ G + + + V + E L +++ +F QE I+
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
++ H N+V+ IG CT+ ++IV E + GG +L + L++ LL++ D + GM
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 357 NYLHRNNIIHRDLKAANLLMNENGV 381
YL IHRDL A N L+ E V
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNV 251
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIM 296
D W ++ L +I G++ +++ G + + + V + E L +++ +F QE I+
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARIL 166
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
++ H N+V+ IG CT+ ++IV E + GG +L + L++ LL++ D + GM
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGM 226
Query: 357 NYLHRNNIIHRDLKAANLLMNENGV 381
YL IHRDL A N L+ E V
Sbjct: 227 EYLESKCCIHRDLAARNCLVTEKNV 251
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 70
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 71 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 128
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 129 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 161
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 126
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 159
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 72
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 73 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 130
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 131 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 71
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 72 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 129
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 130 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 162
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 68
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 69 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 126
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 127 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 159
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 120
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 153
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 67
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 68 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 125
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 126 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 158
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 64
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 65 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 123 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 155
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 63
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 64 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 121
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 122 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 154
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 120
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 153
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 120
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 153
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 92/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 57
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 58 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 115
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 116 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 148
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 91/159 (57%), Gaps = 14/159 (8%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WE+ LK ++ +G +++ G + VA+K L ++ + F E ++M
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA---FLAEANLM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSK 354
++++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++
Sbjct: 63 KQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAE 120
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM ++ N IHRDL+AAN+L+++ + C +++F
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDT------LSCKIADF 153
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 262 YKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVT 321
+KG + DVA+K++ ++E+ EF QE M K+ H +V+F G C++ ++IVT
Sbjct: 29 WKGQY---DVAVKMIKEGSMSED---EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82
Query: 322 EFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
E++S G + +YL GL+ LL + DV +GM +L + IHRDL A N L++ +
Sbjct: 83 EYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRD 140
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI LK E K+ +G + +++ + VA+K + ++ F E ++M
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 231
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK-LPLLLRVAIDVSKG 355
+ ++H +V+ T+ P ++I+TEFM+ GS+ D+L + + LP L+ + +++G
Sbjct: 232 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M ++ + N IHRDL+AAN+L++ + V C +++F
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLV------CKIADF 322
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI LK E K+ +G + +++ + VA+K + ++ F E ++M
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA---FLAEANVM 237
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK-LPLLLRVAIDVSKG 355
+ ++H +V+ T+ P ++I+TEFM+ GS+ D+L + + LP L+ + +++G
Sbjct: 238 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M ++ + N IHRDL+AAN+L++ + + C +++F
Sbjct: 297 MAFIEQRNYIHRDLRAANILVS------ASLVCKIADF 328
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 89/158 (56%), Gaps = 12/158 (7%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIM 296
D WEI LK E K+ +G + +++ + VA+K + ++ F E ++M
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMS---VEAFLAEANVM 64
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK-LPLLLRVAIDVSKG 355
+ ++H +V+ T+ P ++I+TEFM+ GS+ D+L + + LP L+ + +++G
Sbjct: 65 KTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M ++ + N IHRDL+AAN+L++ + + C +++F
Sbjct: 124 MAFIEQRNYIHRDLRAANILVS------ASLVCKIADF 155
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 91/157 (57%), Gaps = 14/157 (8%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQ-DVAIKVLTNEHLNENIRREFAQEVHIMRK 298
WE+ LK ++ +G + +++ G + VA+K L ++ + F E ++M++
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQ 60
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL--LLRVAIDVSKGM 356
++H +V+ T+ P ++I+TE+M GS+ D+L K G+KL + LL +A +++GM
Sbjct: 61 LQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGM 118
Query: 357 NYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
++ N IHR+L+AAN+L+++ + C +++F
Sbjct: 119 AFIEERNYIHRNLRAANILVSDT------LSCKIADF 149
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EID S +K E I +G + ++ G VAIK L + + E RR+F E I
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASI 87
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H NV+ G T+ + I+TEFM GS+ +L + + L+ + ++ G
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL N +HRDL A N+L+N N V C +S+F
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLV------CKVSDF 179
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 82/164 (50%), Gaps = 11/164 (6%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAF---FSQDVAIKVLT-NEHLNENIRREFAQEVHIM 296
E+DAS +K E I +G + ++ G +DVA+ + T E RR+F E IM
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+ H NVV G TR + IV EFM G++ +L K + L+ + ++ GM
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 357 NYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNFLSISTVI 400
YL +HRDL A N+L+N N V C +S+F +S VI
Sbjct: 159 RYLADMGYVHRDLAARNILVNSNLV------CKVSDF-GLSRVI 195
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EID S +K E I +G + ++ +G + VAIK L + E RREF E I
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRREFLSEASI 68
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T + I+TEFM G++ +L + L+ + ++ G
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 128
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL + +HRDL A N+L+N N V C +S+F
Sbjct: 129 MRYLAEMSYVHRDLAARNILVNSNLV------CKVSDF 160
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EID S +K E I +G + ++ +G + VAIK L + E RREF E I
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY-TERQRREFLSEASI 70
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T + I+TEFM G++ +L + L+ + ++ G
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASG 130
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL + +HRDL A N+L+N N V C +S+F
Sbjct: 131 MRYLAEMSYVHRDLAARNILVNSNLV------CKVSDF 162
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK+L NE EF E IM + H ++V+ +
Sbjct: 48 SGAFGTVYKGIWVPEGETVKIPVAIKIL-NETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C P + +VT+ M G + +Y+H+ K + LLL + ++KGM YL ++HRD
Sbjct: 107 GVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD 165
Query: 369 LKAANLLM-NENGVRDSD 385
L A N+L+ + N V+ +D
Sbjct: 166 LAARNVLVKSPNHVKITD 183
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EID S +K E I +G + ++ G VAIK L + + E RR+F E I
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASI 61
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H NV+ G T+ + I+TEFM GS+ +L + + L+ + ++ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL N +HR L A N+L+N N V C +S+F
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLV------CKVSDF 153
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EIDAS +K E I G + ++ G VAIK L + ++ RR+F E I
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASI 83
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N++ G T+ + I+TE+M GS+ +L K + L+ + + G
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL + +HRDL A N+L+N N V C +S+F
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLV------CKVSDF 175
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 9/138 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK+L NE EF E IM + H ++V+ +
Sbjct: 25 SGAFGTVYKGIWVPEGETVKIPVAIKIL-NETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C P + +VT+ M G + +Y+H+ K + LLL + ++KGM YL ++HRD
Sbjct: 84 GVCLSP-TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRD 142
Query: 369 LKAANLLM-NENGVRDSD 385
L A N+L+ + N V+ +D
Sbjct: 143 LAARNVLVKSPNHVKITD 160
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EIDAS +K E I G + ++ G VAIK L + ++ RR+F E I
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASI 62
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N++ G T+ + I+TE+M GS+ +L K + L+ + + G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL + +HRDL A N+L+N N V C +S+F
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLV------CKVSDF 154
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHI 295
EIDAS +K E I G + ++ G VAIK L + ++ RR+F E I
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASI 68
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N++ G T+ + I+TE+M GS+ +L K + L+ + + G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL + +HRDL A N+L+N N V C +S+F
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLV------CKVSDF 160
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAF-----FSQDVAIKVLTNEHLNENIRREFAQEVHI 295
EI+AS + E I +G + ++ G VAIK L + E RR+F E I
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY-TEKQRRDFLGEASI 76
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N++ G T+ + IVTE+M GS+ +L K + L+ + +S G
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 168
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 81/151 (53%), Gaps = 16/151 (10%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVL---TNEHLNENIRREFAQEVHIMR 297
EID + L E I G + +Y+ + +VA+K +E +++ I QE +
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIEN-VRQEAKLFA 61
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRVAIDVSKG 355
++H N++ G C + P L +V EF GG L++ G ++P +L+ A+ +++G
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARG 117
Query: 356 MNYLHRNN---IIHRDLKAANLLM---NENG 380
MNYLH IIHRDLK++N+L+ ENG
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENG 148
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 251 HKIVSGSYCDLYKGAFFSQDVAIKVLTN--EHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+K+ G + +YKG + VA+K L + E ++++F QE+ +M K +H N+V+ +
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGMNYLHRNN 363
G + L +V +M GS+ D L C P L ++A + G+N+LH N+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 364 IIHRDLKAANLLMNE 378
IHRD+K+AN+L++E
Sbjct: 154 HIHRDIKSANILLDE 168
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 251 HKIVSGSYCDLYKGAFFSQDVAIKVLTN--EHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+K+ G + +YKG + VA+K L + E ++++F QE+ +M K +H N+V+ +
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGMNYLHRNN 363
G + L +V +M GS+ D L C P L ++A + G+N+LH N+
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 153
Query: 364 IIHRDLKAANLLMNE 378
IHRD+K+AN+L++E
Sbjct: 154 HIHRDIKSANILLDE 168
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 70
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 162
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 87
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 179
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 251 HKIVSGSYCDLYKGAFFSQDVAIKVLTN--EHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+K+ G + +YKG + VA+K L + E ++++F QE+ +M K +H N+V+ +
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGMNYLHRNN 363
G + L +V +M GS+ D L C P L ++A + G+N+LH N+
Sbjct: 91 GFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLSWHMRCKIAQGAANGINFLHENH 147
Query: 364 IIHRDLKAANLLMNE 378
IHRD+K+AN+L++E
Sbjct: 148 HIHRDIKSANILLDE 162
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 97
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 189
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE+M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 261 LYKGAFFSQDVAIKVLTNE-----------HLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
L KG F AIKV E +E +R F +EV +MR + H NV++FIG
Sbjct: 18 LGKGCFGQ---AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+ RL +TE++ GG++ + + A D++ GM YLH NIIHRDL
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDL 134
Query: 370 KAANLLMNEN 379
+ N L+ EN
Sbjct: 135 NSHNCLVREN 144
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLV------CKVSDF 191
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 70
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE M GS+ +L K + L+ + ++ G
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 162
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 21/160 (13%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
+D + +KF+ I G++ + K D AIK + E+ +++ R+FA E+ ++
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLC 70
Query: 298 KV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK---------------CGLK 341
K+ H N++ +GAC L++ E+ G++ D+L K + L
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
LL A DV++GM+YL + IHRDL A N+L+ EN V
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 170
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 13/159 (8%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVH 294
EI S + + I +G + ++YKG + VAIK L + E R +F E
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAG 98
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
IM + H N+++ G ++ + I+TE+M G++ +L ++ + L+ + ++
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 158
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
GM YL N +HRDL A N+L+N N V C +S+F
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLV------CKVSDF 191
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-----SQDVAIKVLTNEHLNENIRREFAQEVHI 295
E+DA+ + + + +G + ++ G VAIK L + E RR+F E I
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASI 99
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G T+ + IVTE M GS+ +L K + L+ + ++ G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+N N V C +S+F
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLV------CKVSDF 191
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 21/160 (13%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
+D + +KF+ I G++ + K D AIK + E+ +++ R+FA E+ ++
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLC 80
Query: 298 KV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK---------------CGLK 341
K+ H N++ +GAC L++ E+ G++ D+L K + L
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
LL A DV++GM+YL + IHRDL A N+L+ EN V
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 180
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH 301
ID ++ E + G++ + K + ++DVAIK + +E + R+ F E+ + +V H
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 61
Query: 302 MNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL-----LLRVAIDVSKGM 356
N+V+ GAC P + +V E+ GGS+Y+ LH + LP + + S+G+
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGV 116
Query: 357 NYLHR---NNIIHRDLKAANLLMNENGV 381
YLH +IHRDLK NLL+ G
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGT 144
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 11/160 (6%)
Query: 236 GIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-QD-----VAIKVLTNEHLNENIRREF 289
G D + + LKF ++ G++ + + QD VA+K L +H E R+F
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDF 58
Query: 290 AQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLR 347
+E+ I++ ++H N+V++ G C R L ++ E++ GS+ DYL K K + LL+
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118
Query: 348 VAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDSDI 386
+ KGM YL IHRDL N+L+ NEN V+ D
Sbjct: 119 YTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 17/163 (10%)
Query: 236 GIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-QD-----VAIKVL---TNEHLNENIR 286
G D + + LKF ++ G++ + + QD VA+K L T EHL
Sbjct: 1 GSDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL----- 55
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGSIYDYLHKQKCGLKLPL 344
R+F +E+ I++ ++H N+V++ G C R L ++ E++ GS+ DYL K K +
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDSDI 386
LL+ + KGM YL IHRDL N+L+ NEN V+ D
Sbjct: 116 LLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDF 158
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 17/148 (11%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH 301
ID ++ E + G++ + K + ++DVAIK + +E + R+ F E+ + +V H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----SERKAFIVELRQLSRVNH 60
Query: 302 MNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGM 356
N+V+ GAC P + +V E+ GGS+Y+ LH + LP + + S+G+
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAE---PLPYYTAAHAMSWCLQCSQGV 115
Query: 357 NYLHR---NNIIHRDLKAANLLMNENGV 381
YLH +IHRDLK NLL+ G
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGT 143
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAF---FSQDV--AIKVLTNEHLNENIRREFAQEVHI 295
EI+AS + E I SG ++ G +DV AIK L + E RR+F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASI 103
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G TR IVTE+M GS+ +L + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+ DS++ C +S+F
Sbjct: 164 MRYLSDLGYVHRDLAARNVLV------DSNLVCKVSDF 195
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 77/158 (48%), Gaps = 12/158 (7%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAF---FSQDV--AIKVLTNEHLNENIRREFAQEVHI 295
EI+AS + E I SG ++ G +DV AIK L + E RR+F E I
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASI 103
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKG 355
M + H N+++ G TR IVTE+M GS+ +L + L+ + V G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 356 MNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
M YL +HRDL A N+L+ DS++ C +S+F
Sbjct: 164 MRYLSDLGYVHRDLAARNVLV------DSNLVCKVSDF 195
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 73 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 128 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 187
Query: 385 DI 386
D
Sbjct: 188 DF 189
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 49 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 103
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 104 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 163
Query: 385 DI 386
D
Sbjct: 164 DF 165
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 45 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 100 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 159
Query: 385 DI 386
D
Sbjct: 160 DF 161
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 47 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 101
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 102 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 161
Query: 385 DI 386
D
Sbjct: 162 DF 163
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 48 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 102
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 103 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 162
Query: 385 DI 386
D
Sbjct: 163 DF 164
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 46 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 100
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 101 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 160
Query: 385 DI 386
D
Sbjct: 161 DF 162
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 41 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 95
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 96 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 155
Query: 385 DI 386
D
Sbjct: 156 DF 157
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 40 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 94
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 95 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 154
Query: 385 DI 386
D
Sbjct: 155 DF 156
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 42 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 96
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 97 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 156
Query: 385 DI 386
D
Sbjct: 157 DF 158
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 60 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 115 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 174
Query: 385 DI 386
D
Sbjct: 175 DF 176
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 60 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 114
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 115 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 174
Query: 385 DI 386
D
Sbjct: 175 DF 176
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ EF+
Sbjct: 45 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLP 99
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ +YL K K + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 100 YGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 159
Query: 385 DI 386
D
Sbjct: 160 DF 161
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 21/160 (13%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
+D + +KF+ I G++ + K D AIK + E+ +++ R+FA E+ ++
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRM-KEYASKDDHRDFAGELEVLC 77
Query: 298 KV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK---------------CGLK 341
K+ H N++ +GAC L++ E+ G++ D+L K + L
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
LL A DV++GM+YL + IHR+L A N+L+ EN V
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYV 177
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEAL 443
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 444 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENG-VRDSDIHCYLSNFLSIST 398
+ YL +HRD+ A N+L++ N V+ D LS ++ ST
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDST 545
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 60
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 61 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENG-VRDSDIHCYLSNFLSIST 398
+ YL +HRD+ A N+L++ N V+ D LS ++ ST
Sbjct: 120 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDST 162
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEAL 63
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 64 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
+ YL +HRD+ A N+L++ N
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN 147
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 91
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 92 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 150
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
+ YL +HRD+ A N+L++ N
Sbjct: 151 ALAYLESKRFVHRDIAARNVLVSSN 175
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 65
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 66 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENG-VRDSDIHCYLSNFLSIST 398
+ YL +HRD+ A N+L++ N V+ D LS ++ ST
Sbjct: 125 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDST 167
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 66
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 67 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 355 GMNYLHRNNIIHRDLKAANLLMNENG-VRDSDIHCYLSNFLSIST 398
+ YL +HRD+ A N+L++ N V+ D LS ++ ST
Sbjct: 126 ALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFG--LSRYMEDST 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 63
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 64 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
+ YL +HRD+ A N+L++ N
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN 147
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN-CTSDSVREKFLQEAL 68
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 69 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
+ YL +HRD+ A N+L++ N
Sbjct: 128 ALAYLESKRFVHRDIAARNVLVSSN 152
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 76/145 (52%), Gaps = 7/145 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEAL 63
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 64 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNEN 379
+ YL +HRD+ A N+L++ N
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSSN 147
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 3/116 (2%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIV 320
+G + VA+K L E +I + +E+ I+R + H N+V++ G CT + ++
Sbjct: 45 EGDNTGEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 103
Query: 321 TEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
EF+ GS+ +YL K K + L L+ A+ + KGM+YL +HRDL A N+L+
Sbjct: 104 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 159
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIV 320
+G + VA+K L E +I + +E+ I+R + H N+V++ G CT + ++
Sbjct: 33 EGDNTGEQVAVKSLKPESGGNHIA-DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLI 91
Query: 321 TEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NEN 379
EF+ GS+ +YL K K + L L+ A+ + KGM+YL +HRDL A N+L+ +E+
Sbjct: 92 MEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH 151
Query: 380 GVRDSDI 386
V+ D
Sbjct: 152 QVKIGDF 158
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 43 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 97
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL K K + LL+ + KGM YL IHR+L N+L+ NEN V+
Sbjct: 98 YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIG 157
Query: 385 DI 386
D
Sbjct: 158 DF 159
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 22/165 (13%)
Query: 233 PAEGIDVWEIDASLLK-----FE--HKIVSGSYCDLYKGAFF--SQDVAIKVLTNEHLNE 283
PA +D EID S L+ FE + +G+Y +YKG Q AIKV+ +
Sbjct: 7 PARSLD--EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTG 61
Query: 284 NIRREFAQEVHIMRKVRH-MNVVQFIGACTR--PP----RLFIVTEFMSGGSIYDYLHKQ 336
+ E QE+++++K H N+ + GA + PP +L++V EF GS+ D +
Sbjct: 62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT 121
Query: 337 KCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
K LK + + ++ +G+++LH++ +IHRD+K N+L+ EN
Sbjct: 122 KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 166
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 74 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 133 SKRFIHRDLAARNLLL 148
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 251 HKIVSGSYCDLYKGAFFSQDVAIKVLTN--EHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+K G + +YKG + VA+K L + E ++++F QE+ + K +H N+V+ +
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-----LRVAIDVSKGMNYLHRNN 363
G + L +V + GS+ D L C P L ++A + G+N+LH N+
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPLSWHXRCKIAQGAANGINFLHENH 144
Query: 364 IIHRDLKAANLLMNE 378
IHRD+K+AN+L++E
Sbjct: 145 HIHRDIKSANILLDE 159
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 80 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 139 SKRFIHRDLAARNLLL 154
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 80 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 139 SKRFIHRDLAARNLLL 154
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 70 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 129 SKRFIHRDLAARNLLL 144
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 74 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 133 SKRFIHRDLAARNLLL 148
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 70 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 129 SKRFIHRDLAARNLLL 144
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 7/136 (5%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNE-NIRREFAQEVHIMRKVR 300
L+ K+ GS+ + +G + + VA+K L + L++ +F +EV+ M +
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
H N+++ G PP + +VTE GS+ D L K + L L R A+ V++GM YL
Sbjct: 70 HRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 361 RNNIIHRDLKAANLLM 376
IHRDL A NLL+
Sbjct: 129 SKRFIHRDLAARNLLL 144
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEAL 443
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 444 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 502
Query: 355 GMNYLHRNNIIHRDLKAANLLMN 377
+ YL +HRD+ A N+L++
Sbjct: 503 ALAYLESKRFVHRDIAARNVLVS 525
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLT---NEHLNENIRR--EFAQEVHIMRKV 299
+++E +I G + ++KG VAIK L +E E I + EF +EV IM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H N+V+ G PPR+ V EF+ G +Y L + +K + LR+ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 360 HRNN--IIHRDLKAANLLM 376
N I+HRDL++ N+ +
Sbjct: 139 QNQNPPIVHRDLRSPNIFL 157
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLT---NEHLNENIRR--EFAQEVHIMRKV 299
+++E +I G + ++KG VAIK L +E E I + EF +EV IM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H N+V+ G PPR+ V EF+ G +Y L + +K + LR+ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 360 HRNN--IIHRDLKAANLLM 376
N I+HRDL++ N+ +
Sbjct: 139 QNQNPPIVHRDLRSPNIFL 157
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 85/165 (51%), Gaps = 10/165 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVH 294
+EI ++ I G + D+++G + S + VAIK N ++++R +F QE
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN-CTSDSVREKFLQEAL 63
Query: 295 IMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
MR+ H ++V+ IG T P ++I+ E + G + +L +K L L L+ A +S
Sbjct: 64 TMRQFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 355 GMNYLHRNNIIHRDLKAANLLMNE-NGVRDSDIHCYLSNFLSIST 398
+ YL +HRD+ A N+L++ + V+ D LS ++ ST
Sbjct: 123 ALAYLESKRFVHRDIAARNVLVSATDCVKLGDFG--LSRYMEDST 165
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLT---NEHLNENIRR--EFAQEVHIMRKV 299
+++E +I G + ++KG VAIK L +E E I + EF +EV IM +
Sbjct: 21 IEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H N+V+ G PPR+ V EF+ G +Y L + +K + LR+ +D++ G+ Y+
Sbjct: 81 NHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 360 HRNN--IIHRDLKAANLLM 376
N I+HRDL++ N+ +
Sbjct: 139 QNQNPPIVHRDLRSPNIFL 157
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 11/122 (9%)
Query: 271 VAIKVL---TNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMS 325
VA+K L T EHL R+F +E+ I++ ++H N+V++ G C R L ++ E++
Sbjct: 45 VAVKKLQHSTEEHL-----RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 99
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM-NENGVRDS 384
GS+ DYL + LL+ + KGM YL IHRDL N+L+ NEN V+
Sbjct: 100 YGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIG 159
Query: 385 DI 386
D
Sbjct: 160 DF 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 15/153 (9%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIM 296
ID +LL + G + + +G +D VA+K + ++ ++ EF E M
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 297 RKVRHMNVVQFIGACTRP-----PRLFIVTEFMSGGSIYDYL--HKQKCGLK-LPL--LL 346
+ H NV++ +G C P+ ++ FM G ++ YL + + G K +PL LL
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 347 RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +D++ GM YL N +HRDL A N ++ ++
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDD 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D +E+ + +V +YC K + VAIK + E ++ E +E+ M
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKK-----EKVAIKRINLEKCQTSMD-ELLKEIQAMS 63
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCG-LKLPLLLRVAI 350
+ H N+V + + L++V + +SGGS+ D + + K G L + +
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG---VRDSDIHCYLSNFLSIS 397
+V +G+ YLH+N IHRD+KA N+L+ E+G + D + +L+ I+
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 173
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 253 IVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACT 312
+V +YC K + VAIK + E ++ E +E+ M + H N+V + +
Sbjct: 30 VVQAAYCAPKK-----EKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVSYYTSFV 83
Query: 313 RPPRLFIVTEFMSGGSIYDYLH------KQKCG-LKLPLLLRVAIDVSKGMNYLHRNNII 365
L++V + +SGGS+ D + + K G L + + +V +G+ YLH+N I
Sbjct: 84 VKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQI 143
Query: 366 HRDLKAANLLMNENG---VRDSDIHCYLSNFLSIS 397
HRD+KA N+L+ E+G + D + +L+ I+
Sbjct: 144 HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
+VWEI L G++ +YK E +E ++ E+ I+
Sbjct: 19 EVWEIVGEL-------GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILA 71
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H +V+ +GA +L+I+ EF GG++ + + GL P + V + + +N
Sbjct: 72 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 131
Query: 358 YLHRNNIIHRDLKAANLLMN-ENGVRDSDIHCYLSNFLSI 396
+LH IIHRDLKA N+LM E +R +D N ++
Sbjct: 132 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 171
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 86 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 145 LAARNVLVK 153
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 19 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 78 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 136
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 137 LAARNVLVK 145
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 8/160 (5%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
+VWEI L G++ +YK E +E ++ E+ I+
Sbjct: 11 EVWEIVGEL-------GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILA 63
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H +V+ +GA +L+I+ EF GG++ + + GL P + V + + +N
Sbjct: 64 TCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALN 123
Query: 358 YLHRNNIIHRDLKAANLLMN-ENGVRDSDIHCYLSNFLSI 396
+LH IIHRDLKA N+LM E +R +D N ++
Sbjct: 124 FLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL 163
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 91 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 150 LAARNVLVK 158
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 87 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 146 LAARNVLVK 154
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 31 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 90 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 148
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 149 LAARNVLVK 157
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 35 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 94 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 152
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 153 LAARNVLVK 161
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 50 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 109 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 167
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 168 LAARNVLVK 176
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 10 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 335 -KQKCGLKLPL--------------LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ GL+ L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 127 ARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 380 GV 381
V
Sbjct: 187 NV 188
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 87 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 146 LAARNVLVK 154
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 87 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 146 LAARNVLVK 154
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 86 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 145 LAARNVLVK 153
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 91 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 150 LAARNVLVK 158
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 91 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 150 LAARNVLVK 158
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 71
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++TEF G++ YL +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA+K++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 150 MNIKIADF 157
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 71
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++TEF G++ YL +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA+K++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 150 MNIKIADF 157
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA+K++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 150 MNIKIADF 157
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 71
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++TEF G++ YL +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VAIK++ LN ++ +EV IM+ + H N+V+ L+++ E+ SGG
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 97 EVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQKRIVHRDLKAENLLL------DAD 147
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 148 MNIKIADF 155
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VAIK++ LN ++ +EV IM+ + H N+V+ L+++ E+ SGG
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 100 EVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQKRIVHRDLKAENLLL------DAD 150
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 151 MNIKIADF 158
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K+ H N+V+ I
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKLNHQNIVRCI 100
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 161 HFIHRDIAARNCLLTCPG 178
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 6/128 (4%)
Query: 255 SGSYCDLYKGAFFSQDVAIKVLT-----NEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
SG++ +YKG + + +K+ E + +E E ++M V + +V + +G
Sbjct: 59 SGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLG 118
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
C + ++T+ M G + DY+ + K + LL + ++KGMNYL ++HRDL
Sbjct: 119 ICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDL 177
Query: 370 KAANLLMN 377
A N+L+
Sbjct: 178 AARNVLVK 185
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 252 KIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+I GS+ ++YKG + VAIK++ + E+ + QE+ ++ + + ++ G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+ + +L+I+ E++ GGS D L + L+ + + ++ KG++YLH IHRD+
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 370 KAANLLMNENG 380
KAAN+L++E G
Sbjct: 143 KAANVLLSEQG 153
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA+K++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIH 387
++DYL + + VS + Y H+ I+HRDLKA NLL+ D+D++
Sbjct: 92 EVFDYLVAHGWMKEKEARAKFRQIVS-AVQYCHQKFIVHRDLKAENLLL------DADMN 144
Query: 388 CYLSNF 393
+++F
Sbjct: 145 IKIADF 150
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ E++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEEDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K+ H N+V+ I
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKLNHQNIVRCI 114
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 115 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 175 HFIHRDIAARNCLLTCPG 192
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 23/164 (14%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 24 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSE 82
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------K 337
+ I+ + H+NVV +GACT+P L ++ EF G++ YL + K
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 338 CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV 186
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 256 GSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRP 314
G + +YKG VA+K L E + +F EV ++ H N+++ G C P
Sbjct: 41 GGFGKVYKGRLADGXLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 99
Query: 315 PRLFIVTEFMSGGSIYDYLHKQ---KCGLKLPLLLRVAIDVSKGMNYLHRN---NIIHRD 368
+V +M+ GS+ L ++ + L P R+A+ ++G+ YLH + IIHRD
Sbjct: 100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 159
Query: 369 LKAANLLMNEN 379
+KAAN+L++E
Sbjct: 160 VKAANILLDEE 170
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 248 KFEHKIVSGSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVV 305
+ + I G++ L + ++VA+K++ LN ++ +EV IM+ + H N+V
Sbjct: 18 RLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 306 QFIGACTRPPRLFIVTEFMSGGSIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ L++V E+ SGG ++DYL H + + R + + Y H+
Sbjct: 78 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY 134
Query: 364 IIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
I+HRDLKA NLL+ D D++ +++F
Sbjct: 135 IVHRDLKAENLLL------DGDMNIKIADF 158
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 10 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 335 -KQKCGLKLPL--------------LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ GL+ L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 127 AREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 380 GV 381
V
Sbjct: 187 NV 188
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 126
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 127 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 186
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 187 HFIHRDIAARNCLLTCPG 204
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 2 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 59
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL- 333
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 60 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 118
Query: 334 --------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 119 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 178
Query: 380 GV 381
V
Sbjct: 179 NV 180
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 99
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 160 HFIHRDIAARNCLLTCPG 177
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 106
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 107 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 166
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 167 HFIHRDIAARNCLLTCPG 184
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 8/130 (6%)
Query: 256 GSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRP 314
G + +YKG VA+K L E + +F EV ++ H N+++ G C P
Sbjct: 49 GGFGKVYKGRLADGTLVAVKRLKEER-XQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 107
Query: 315 PRLFIVTEFMSGGSIYDYLHKQ---KCGLKLPLLLRVAIDVSKGMNYLHRN---NIIHRD 368
+V +M+ GS+ L ++ + L P R+A+ ++G+ YLH + IIHRD
Sbjct: 108 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRD 167
Query: 369 LKAANLLMNE 378
+KAAN+L++E
Sbjct: 168 VKAANILLDE 177
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 100
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 161 HFIHRDIAARNCLLTCPG 178
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 114
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 115 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 175 HFIHRDIAARNCLLTCPG 192
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 82 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 140
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 200
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 201 HFIHRDIAARNCLLTCPG 218
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 116
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 117 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 176
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 177 HFIHRDIAARNCLLTCPG 194
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 3 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 60
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL- 333
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 61 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 119
Query: 334 --------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 120 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 179
Query: 380 GV 381
V
Sbjct: 180 NV 181
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 100
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 101 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 160
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 161 HFIHRDIAARNCLLTCPG 178
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 230 VNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRR 287
V +P ++ + + K E +I GS+ +++KG Q VAIK++ + E+
Sbjct: 9 VQVPGMQNNIADPEELFTKLE-RIGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIE 66
Query: 288 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLL 346
+ QE+ ++ + V ++ G+ + +L+I+ E++ GGS D L ++ +L
Sbjct: 67 DIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML 126
Query: 347 RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ ++ KG++YLH IHRD+KAAN+L++E G
Sbjct: 127 K---EILKGLDYLHSEKKIHRDIKAANVLLSEQG 157
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 10 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL- 333
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 334 --------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 127 ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 380 GV 381
V
Sbjct: 187 NV 188
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 59 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 117
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 118 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 177
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 178 HFIHRDIAARNCLLTCPG 195
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 10 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 67
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL- 333
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 68 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 126
Query: 334 --------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 127 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 186
Query: 380 GV 381
V
Sbjct: 187 NV 188
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA++++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 150 MNIKIADF 157
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA++++ LN + ++ +EV IM+ + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
++ +++F
Sbjct: 150 MNIKIADF 157
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 33 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 91
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 92 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 151
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 152 HFIHRDIAARNCLLTCPG 169
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 22 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++T+ M G + DY+ + K + LL + +++GMNYL ++HRD
Sbjct: 81 GICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRD 139
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 140 LAARNVLVK 148
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVCSEQDELDFLMEALIISKFNHQNIVRCI 99
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 100 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 160 HFIHRDIAARNCLLTCPG 177
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGGS 328
VA+K L + ++ R + QE+ I+R + H +++++ G C L +V E++ GS
Sbjct: 63 VAVKALKADAGPQH-RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGS 121
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ DYL + GL LL A + +GM YLH + IHRDL A N+L++ +
Sbjct: 122 LRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDND 170
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 251 HKIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI GS+ +++KG + VAIK++ + E+ + QE+ ++ + V ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
G+ + +L+I+ E++ GGS D L ++ +LR ++ KG++YLH IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKIHR 128
Query: 368 DLKAANLLMNENG 380
D+KAAN+L++E+G
Sbjct: 129 DIKAANVLLSEHG 141
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 252 KIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI GS+ +++KG + VAIK++ + E+ + QE+ ++ + V ++ G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+ + +L+I+ E++ GGS D L ++ +LR ++ KG++YLH IHRD
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKIHRD 144
Query: 369 LKAANLLMNENG 380
+KAAN+L++E+G
Sbjct: 145 IKAANVLLSEHG 156
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 251 HKIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI GS+ +++KG + VAIK++ + E+ + QE+ ++ + V ++
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
G+ + +L+I+ E++ GGS D L ++ +LR ++ KG++YLH IHR
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKIHR 128
Query: 368 DLKAANLLMNENG 380
D+KAAN+L++E+G
Sbjct: 129 DIKAANVLLSEHG 141
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
Query: 251 HKIVSGSYCDLYKGA--FFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI GS+ +++KG + VAIK++ + E+ + QE+ ++ + V ++
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
G+ + +L+I+ E++ GGS D L ++ +LR ++ KG++YLH IHR
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKIHR 148
Query: 368 DLKAANLLMNENG 380
D+KAAN+L++E+G
Sbjct: 149 DIKAANVLLSEHG 161
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 57
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 58 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 115
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 147
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 28 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 82
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 140
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 172
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 17/127 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++
Sbjct: 52 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 330 YDYL---------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
+YL H + L L+ A V++GM YL IHRDL A N+
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 170
Query: 375 LMNENGV 381
L+ E+ V
Sbjct: 171 LVTEDNV 177
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 41 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 95
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 153
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 222 QEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNE 279
Q+Q I + A G D LKF+ +I GS+ +YKG + +VA L +
Sbjct: 6 QQQDDIEELETKAVGXSN---DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDR 62
Query: 280 HLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR----LFIVTEFMSGGSIYDYLHK 335
L ++ R+ F +E ++ ++H N+V+F + + + +VTE + G++ YL +
Sbjct: 63 KLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR 122
Query: 336 QKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMN 377
K K+ +L + KG+ +LH IIHRDLK N+ +
Sbjct: 123 FKV-XKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 165
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 17/127 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++
Sbjct: 48 VAVKMLKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 330 YDYL---------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
+YL H + L L+ A V++GM YL IHRDL A N+
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 166
Query: 375 LMNENGV 381
L+ E+ V
Sbjct: 167 LVTEDNV 173
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 5 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 59
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 117
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 149
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 256 GSYCDLYKGAFFSQ-------DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
G++ ++Y+G VA+K L E +E +F E I+ K H N+V+ I
Sbjct: 56 GAFGEVYEGQVSGMPNDPSPLQVAVKTLP-EVYSEQDELDFLMEALIISKFNHQNIVRCI 114
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRN 362
G + FI+ E M+GG + +L + Q L + LL VA D++ G YL N
Sbjct: 115 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 174
Query: 363 NIIHRDLKAANLLMNENG 380
+ IHRD+ A N L+ G
Sbjct: 175 HFIHRDIAARNCLLTCPG 192
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 56
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 114
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 146
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 83/152 (54%), Gaps = 21/152 (13%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKV--RH 301
A + + I G + ++++G + ++VA+K+ ++ R + +E I + V RH
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH 62
Query: 302 MNVVQFIGACTRP----PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
N++ FI A + +L++V+++ GS++DYL++ + + ++++A+ + G+
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLA 120
Query: 358 YLH--------RNNIIHRDLKAANLLMNENGV 381
+LH + I HRDLK+ N+L+ +NG
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 152
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRP--PRLFIVTEFMSGGS 328
VA+K L +H + +R+F +E+ I++ + +V++ G P P L +V E++ G
Sbjct: 39 VAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGC 96
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHC 388
+ D+L + + L LL + + KGM YL +HRDL A N+L+ +S+ H
Sbjct: 97 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV------ESEAHV 150
Query: 389 YLSNF 393
+++F
Sbjct: 151 KIADF 155
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE+ L + G++ + D VA+K+
Sbjct: 51 AGVSEYELPED--PRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM 108
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 109 LKSDATEKDLS-DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQ 167
Query: 335 -KQKCGLKLPL--------------LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ GL+ L+ A V++GM YL IHRDL A N+L+ E+
Sbjct: 168 ARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227
Query: 380 GV 381
V
Sbjct: 228 NV 229
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 29 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 88 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 146
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 147 LAARNVLVK 155
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 86 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 145 LAARNVLVK 153
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 86 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 145 LAARNVLVK 153
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 26 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 85 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 143
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 144 LAARNVLVK 152
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE L + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-----------KCG 339
+ I+ + H+NVV +GACT+P L ++ EF G++ YL + K
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV 182
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 25 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 84 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 142
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 143 LAARNVLVK 151
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 29 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 88 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 146
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 147 LAARNVLVK 155
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 28 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 87 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 145
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 146 LAARNVLVK 154
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 71
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 72 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 131
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 132 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 177
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 32 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 91 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 149
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 150 LAARNVLVK 158
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 26 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 85 GICLTS-TVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 143
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 144 LAARNVLVK 152
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 224 QSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD----VAIKVLTNE 279
Q G ++P + WE+ + ++ +G + Y + QD VAIK E
Sbjct: 1 QGGGRSPSLPTQTCGPWEM-------KERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQE 51
Query: 280 HLNENIRREFAQEVHIMRKVRHMNVV---------QFIGACTRPPRLFIVTEFMSGGSIY 330
L+ R + E+ IM+K+ H NVV Q + P + E+ GG +
Sbjct: 52 -LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLR 107
Query: 331 DYLHK--QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVR 382
YL++ CGLK + + D+S + YLH N IIHRDLK N+++ R
Sbjct: 108 KYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR 161
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH 301
ID L F K+ +L+KG + D+ +KVL + R+F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 302 MNVVQFIGACTRP--PRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNY 358
NV+ +GAC P P ++T +M GS+Y+ LH+ + ++ A+D+++GM +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126
Query: 359 LH 360
LH
Sbjct: 127 LH 128
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 117
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 118 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 177
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 178 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 223
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 259 CDLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
C L KG+F Q+ A+KV+ +EV +++K+ H N+++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+IV E +GG ++D + K+K R+ V G+ Y+H++NI+HRD
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 369 LKAANLLMNENGVRDSDI 386
LK N+L+ E+ +D DI
Sbjct: 147 LKPENILL-ESKEKDCDI 163
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + + VAIK L E + +E E ++M V + +V + +
Sbjct: 27 SGAFGTVYKGLWIPEGEKVKIPVAIKEL-REATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + ++ + M G + DY+ + K + LL + ++KGMNYL ++HRD
Sbjct: 86 GICLTS-TVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRD 144
Query: 369 LKAANLLMN 377
L A N+L+
Sbjct: 145 LAARNVLVK 153
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 259 CDLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
C L KG+F Q+ A+KV+ +EV +++K+ H N+++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+IV E +GG ++D + K+K R+ V G+ Y+H++NI+HRD
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 369 LKAANLLMNENGVRDSDI 386
LK N+L+ E+ +D DI
Sbjct: 147 LKPENILL-ESKEKDCDI 163
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 251 HKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
K+ GSY +YK Q VAIK + E + +E +E+ IM++ +VV++
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G+ + L+IV E+ GS+ D + + L + + KG+ YLH IHRD
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRD 150
Query: 369 LKAANLLMNENGVRDSDIHCYLSNF 393
+KA N+L+N G H L++F
Sbjct: 151 IKAGNILLNTEG------HAKLADF 169
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 24 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 82
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDL 142
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 143 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 188
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL 140
Query: 337 -KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 259 CDLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
C L KG+F Q+ A+KV+ +EV +++K+ H N+++
Sbjct: 28 CMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+IV E +GG ++D + K+K R+ V G+ Y+H++NI+HRD
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNIVHRD 146
Query: 369 LKAANLLMNENGVRDSDI 386
LK N+L+ E+ +D DI
Sbjct: 147 LKPENILL-ESKEKDCDI 163
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 83/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G + + D VA+K+
Sbjct: 63 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM 120
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++ +YL
Sbjct: 121 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLR 179
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 180 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 239
Query: 380 GV 381
V
Sbjct: 240 NV 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++
Sbjct: 59 VAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 330 YDYLHKQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
+YL ++ + L+ +++GM YL IHRDL A N+
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 177
Query: 375 LMNENGV 381
L+ EN V
Sbjct: 178 LVTENNV 184
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++
Sbjct: 57 VAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 330 YDYLHKQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
+YL ++ + L+ +++GM YL IHRDL A N+
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNV 175
Query: 375 LMNENGV 381
L+ EN V
Sbjct: 176 LVTENNV 182
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ E+ S G++
Sbjct: 62 VAVKMLKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 330 YDYLHKQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
+YL ++ + L+ +++GM YL IHRDL A N+
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 180
Query: 375 LMNENGV 381
L+ EN V
Sbjct: 181 LVTENNV 187
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 11/128 (8%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
++VA+K++ LN + ++ +EV I + + H N+V+ L++V E+ SGG
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 328 SIYDYL--HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
++DYL H + + R + + Y H+ I+HRDLKA NLL+ D+D
Sbjct: 99 EVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKFIVHRDLKAENLLL------DAD 149
Query: 386 IHCYLSNF 393
+ +++F
Sbjct: 150 XNIKIADF 157
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 262 YKGAFFSQDV------AIKVLTNEHLNENIR-REFAQEVHIMRKVRHMNVVQFIGACTRP 314
+ +F++DV AIK ++ N + ++ +EV ++K+RH N +Q+ G R
Sbjct: 28 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 87
Query: 315 PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
++V E+ G S D L K L+ + V +G+ YLH +N+IHRD+KA N+
Sbjct: 88 HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 146
Query: 375 LMNENGV 381
L++E G+
Sbjct: 147 LLSEPGL 153
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Query: 262 YKGAFFSQDV------AIKVLTNEHLNENIR-REFAQEVHIMRKVRHMNVVQFIGACTRP 314
+ +F++DV AIK ++ N + ++ +EV ++K+RH N +Q+ G R
Sbjct: 67 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE 126
Query: 315 PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
++V E+ G S D L K L+ + V +G+ YLH +N+IHRD+KA N+
Sbjct: 127 HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNI 185
Query: 375 LMNENGV 381
L++E G+
Sbjct: 186 LLSEPGL 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE L + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-----------KCG 339
+ I+ + H+NVV +GACT+P L ++ EF G++ YL + K
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV 182
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGS 328
VA+K L +H + +R+F +E+ I++ + +V++ G P R L +V E++ G
Sbjct: 42 VAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 99
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHC 388
+ D+L + + L LL + + KGM YL +HRDL A N+L+ +S+ H
Sbjct: 100 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV------ESEAHV 153
Query: 389 YLSNF 393
+++F
Sbjct: 154 KIADF 158
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGS 328
VA+K L +H + +R+F +E+ I++ + +V++ G P R L +V E++ G
Sbjct: 55 VAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 112
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHC 388
+ D+L + + L LL + + KGM YL +HRDL A N+L+ +S+ H
Sbjct: 113 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV------ESEAHV 166
Query: 389 YLSNF 393
+++F
Sbjct: 167 KIADF 171
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPR--LFIVTEFMSGGS 328
VA+K L +H + +R+F +E+ I++ + +V++ G P R L +V E++ G
Sbjct: 43 VAVKQL--QHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGC 100
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHC 388
+ D+L + + L LL + + KGM YL +HRDL A N+L+ +S+ H
Sbjct: 101 LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV------ESEAHV 154
Query: 389 YLSNF 393
+++F
Sbjct: 155 KIADF 159
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK ++ +++ +E+ +++++RH N+V + C + R ++V EF+ +I
Sbjct: 53 VAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TIL 111
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
D L GL ++ + + G+ + H +NIIHRD+K N+L++++GV
Sbjct: 112 DDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGV 162
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 20/150 (13%)
Query: 243 DASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHM 302
D +LL+ K G Y ++++G++ ++VA+K+ ++ R E++ +RH
Sbjct: 9 DITLLECVGK---GRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHE 62
Query: 303 NVVQFIGA--CTR--PPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
N++ FI + +R +L+++T + GS+YDYL Q L LR+ + ++ G+ +
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAH 120
Query: 359 LH--------RNNIIHRDLKAANLLMNENG 380
LH + I HRDLK+ N+L+ +NG
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNG 150
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA--CTR 313
G Y ++++G++ ++VA+K+ ++ R E++ +RH N++ FI + +R
Sbjct: 19 GRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIASDMTSR 75
Query: 314 --PPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--------RNN 363
+L+++T + GS+YDYL Q L LR+ + ++ G+ +LH +
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 133
Query: 364 IIHRDLKAANLLMNENG 380
I HRDLK+ N+L+ +NG
Sbjct: 134 IAHRDLKSKNILVKKNG 150
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 13/127 (10%)
Query: 264 GAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG------ACTRPPRL 317
G+F VA+K+L + + + EF +E M++ H +V + +G A R P
Sbjct: 49 GSFVK--VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106
Query: 318 FIVTEFMSGGSIYDYLHKQKCG---LKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++ FM G ++ +L + G LPL L+R +D++ GM YL N IHRDL A
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166
Query: 373 NLLMNEN 379
N ++ E+
Sbjct: 167 NCMLAED 173
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 222 QEQSGINHVNIPAEGIDV---WEIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDV 271
+E +G N+V I + WE + L F + +G++ + + + + V
Sbjct: 20 EEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 272 AIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
A+K+L + HL E R E+ ++ + HMN+V +GACT ++TE+ G +
Sbjct: 80 AVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 330 YDYLHKQK----CGLKLPLLL-------------RVAIDVSKGMNYLHRNNIIHRDLKAA 372
++L +++ C P ++ + V+KGM +L N IHRDL A
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 373 NLLMN 377
N+L+
Sbjct: 198 NILLT 202
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 222 QEQSGINHVNIPAEGIDV---WEIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDV 271
+E +G N+V I + WE + L F + +G++ + + + + V
Sbjct: 20 EEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 79
Query: 272 AIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
A+K+L + HL E R E+ ++ + HMN+V +GACT ++TE+ G +
Sbjct: 80 AVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 137
Query: 330 YDYLHKQK----CGLKLPLLL-------------RVAIDVSKGMNYLHRNNIIHRDLKAA 372
++L +++ C P ++ + V+KGM +L N IHRDL A
Sbjct: 138 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 197
Query: 373 NLLMN 377
N+L+
Sbjct: 198 NILLT 202
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Query: 222 QEQSGINHVNIPAEGIDV---WEIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDV 271
+E +G N+V I + WE + L F + +G++ + + + + V
Sbjct: 15 EEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTV 74
Query: 272 AIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
A+K+L + HL E R E+ ++ + HMN+V +GACT ++TE+ G +
Sbjct: 75 AVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL 132
Query: 330 YDYLHKQK----CGLKLPLLL-------------RVAIDVSKGMNYLHRNNIIHRDLKAA 372
++L +++ C P ++ + V+KGM +L N IHRDL A
Sbjct: 133 LNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAAR 192
Query: 373 NLLMN 377
N+L+
Sbjct: 193 NILLT 197
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 76
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL---------K 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + +
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 174
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+L++V EF+S + D++ G+ LPL+ + +G+ + H + ++HRD
Sbjct: 73 VIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 131
Query: 369 LKAANLLMNENG 380
LK NLL+N G
Sbjct: 132 LKPQNLLINTEG 143
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA--CTR 313
G Y ++++G++ ++VA+K+ ++ R E++ +RH N++ FI + +R
Sbjct: 48 GRYGEVWRGSWQGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIASDMTSR 104
Query: 314 --PPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--------RNN 363
+L+++T + GS+YDYL Q L LR+ + ++ G+ +LH +
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA 162
Query: 364 IIHRDLKAANLLMNENG 380
I HRDLK+ N+L+ +NG
Sbjct: 163 IAHRDLKSKNILVKKNG 179
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 207 PKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAF 266
P E VV + I+ +P + WE + L F + +G++ + +
Sbjct: 3 PMYEVQWKVVEEINGNNXVXIDPTQLPYD--HKWEFPRNRLSFGKTLGAGAFGKVVEATA 60
Query: 267 F-------SQDVAIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRL 317
+ + VA+K+L + HL E R E+ ++ + HMN+V +GACT
Sbjct: 61 YGLIKSDAAMTVAVKMLKPSAHLTE--REALMSELKVLSYLGNHMNIVNLLGACTIGGPT 118
Query: 318 FIVTEFMSGGSIYDYLHKQK----CGLKLPLLL-------------RVAIDVSKGMNYLH 360
++TE+ G + ++L +++ C P ++ + V+KGM +L
Sbjct: 119 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA 178
Query: 361 RNNIIHRDLKAANLLMN 377
N IHRDL A N+L+
Sbjct: 179 SKNCIHRDLAARNILLT 195
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+L++V EF+S + D++ G+ LPL+ + +G+ + H + ++HRD
Sbjct: 72 VIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 130
Query: 369 LKAANLLMNENG 380
LK NLL+N G
Sbjct: 131 LKPQNLLINTEG 142
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 66
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL---------K 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + +
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 164
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 24/165 (14%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE L + G++ + + F D VA+K+L E + R E
Sbjct: 23 WEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 81
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQ-------------- 336
+ I+ + H+NVV +GACT+P L ++ EF G++ YL +
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 337 KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
K L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 186
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGS 328
+V + L+ E L E +R +E HI+R+V H +++ I + +F+V + M G
Sbjct: 128 EVTAERLSPEQLEE-VREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGE 186
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD-- 385
++DYL +K L + + + +++LH NNI+HRDLK N+L+++N +R SD
Sbjct: 187 LFDYL-TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245
Query: 386 IHCYL 390
C+L
Sbjct: 246 FSCHL 250
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD----VAIKVLTNEH 280
G ++P + WE+ + ++ +G + Y + QD VAIK E
Sbjct: 1 GGGRSPSLPTQTCGPWEM-------KERLGTGGFG--YVLRWIHQDTGEQVAIKQCRQE- 50
Query: 281 LNENIRREFAQEVHIMRKVRHMNVV---------QFIGACTRPPRLFIVTEFMSGGSIYD 331
L+ R + E+ IM+K+ H NVV Q + P + E+ GG +
Sbjct: 51 LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRK 107
Query: 332 YLHK--QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVR 382
YL++ CGLK + + D+S + YLH N IIHRDLK N+++ R
Sbjct: 108 YLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQR 160
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGGS 328
VA+K L + R + QE+ I+R + H +++++ G C L +V E++ GS
Sbjct: 46 VAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ DYL + GL LL A + +GM YLH + IHR+L A N+L++ +
Sbjct: 105 LRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDND 153
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDVAIKVL-TNEHLNENIRREFAQ 291
WE + L F + +G++ + + + + VA+K+L + HL E R
Sbjct: 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTE--REALMS 75
Query: 292 EVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK----CGLKLPLLL 346
E+ ++ + HMN+V +GACT ++TE+ G + ++L +++ C P ++
Sbjct: 76 ELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 347 -------------RVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ V+KGM +L N IHRDL A N+L+
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT 179
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 22/196 (11%)
Query: 204 KEIPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYK 263
K+ PK + ++ + I+ +P + WE + L+F + +G++ + +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 264 GAFFS---QD----VAIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRP 314
F +D VA+K+L + H +E + E+ IM + +H N+V +GACT
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 315 PRLFIVTEFMSGGSIYDYLHKQKCG---------LKLPLLLRVAIDVSKGMNYLHRNNII 365
+ ++TE+ G + ++L ++ L+L LL + V++GM +L N I
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 182
Query: 366 HRDLKAANLLMNENGV 381
HRD+ A N+L+ V
Sbjct: 183 HRDVAARNVLLTNGHV 198
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 70
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 168
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 76
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 174
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVL-TNEHLNENIRREFAQEVHIMRKVRHM 302
A ++ +I G Y +++ G + + VA+KV T E + E Q V + RH
Sbjct: 36 AKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLM----RHE 91
Query: 303 NVVQFIGACTRPP----RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNY 358
N++ FI A + +L+++T++ GS+YDYL + L +L++A G+ +
Sbjct: 92 NILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLCH 149
Query: 359 LH--------RNNIIHRDLKAANLLMNENGV 381
LH + I HRDLK+ N+L+ +NG
Sbjct: 150 LHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 63
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 161
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGGS 328
VA+K L + R + QE+ I+R + H +++++ G C L +V E++ GS
Sbjct: 46 VAVKALKAD-CGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGS 104
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ DYL + GL LL A + +GM YLH + IHR+L A N+L++ +
Sbjct: 105 LRDYLPRHSIGLAQ--LLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDND 153
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 67
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 128 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 165
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDVAIKVLTNEHLNENIRREFAQEV 293
EI S ++F ++ + +YKG F +Q VAIK L ++ +R EF E
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEA 80
Query: 294 HIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL---------------HKQKC 338
+ +++H NVV +G T+ L ++ + S G ++++L K
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 339 GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSDI 386
L+ P + + ++ GM YL ++++H+DL N+L+ + V+ SD+
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 189
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 69
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 167
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVL-TNEHLNENIRREFAQ 291
WE + L+F + +G++ + + F VA+K+L + H +E +
Sbjct: 33 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMS 90
Query: 292 EVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG---------LK 341
E+ IM + +H N+V +GACT + ++TE+ G + ++L ++ L+
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L LL + V++GM +L N IHRD+ A N+L+ V
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 190
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 70
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 168
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 61
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 159
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ + S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 69
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 167
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 256 GSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACT 312
GS+ + L K Q+ A+KV++ + + +E +EV +++++ H N+++
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++V E +GG ++D + +K ++ R+ V G+ Y+H+N I+HRDLK
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKNKIVHRDLKPE 155
Query: 373 NLLMNENGVRDSDI 386
NLL+ E+ +D++I
Sbjct: 156 NLLL-ESKSKDANI 168
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 241 EIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDVAIKVLTNEHLNENIRREFAQEV 293
EI S ++F ++ + +YKG F +Q VAIK L ++ +R EF E
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDK-AEGPLREEFRHEA 63
Query: 294 HIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL---------------HKQKC 338
+ +++H NVV +G T+ L ++ + S G ++++L K
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 339 GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSDI 386
L+ P + + ++ GM YL ++++H+DL N+L+ + V+ SD+
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 172
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---------VAIKV 275
+G++ +P + WE L + G++ + D VA+K+
Sbjct: 17 AGVSEYELPED--PKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM 74
Query: 276 LTNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH 334
L ++ +++ + E+ +M+ + +H N++ +GACT+ L+++ + S G++ +YL
Sbjct: 75 LKDDATEKDLS-DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLR 133
Query: 335 KQKCG---------------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ + L+ +++GM YL IHRDL A N+L+ EN
Sbjct: 134 ARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193
Query: 380 GV 381
V
Sbjct: 194 NV 195
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 256 GSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACT 312
GS+ + L K Q+ A+KV++ + + +E +EV +++++ H N+++
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++V E +GG ++D + +K ++ R+ V G+ Y+H+N I+HRDLK
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKNKIVHRDLKPE 161
Query: 373 NLLMNENGVRDSDI 386
NLL+ E+ +D++I
Sbjct: 162 NLLL-ESKSKDANI 174
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 98
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 99 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N ++ E+
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 196
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 256 GSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACT 312
GS+ + L K Q+ A+KV++ + + +E +EV +++++ H N+++
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++V E +GG ++D + +K ++ R+ V G+ Y+H+N I+HRDLK
Sbjct: 120 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKNKIVHRDLKPE 178
Query: 373 NLLMNENGVRDSDI 386
NLL+ E+ +D++I
Sbjct: 179 NLLL-ESKSKDANI 191
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGGS 328
VA+K L E +R + +E+ I+R + H ++V++ G C + +V E++ GS
Sbjct: 41 VAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 99
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ DYL + GL LL A + +GM YLH + IHR L A N+L++ +
Sbjct: 100 LRDYLPRHCVGLAQLLLF--AQQICEGMAYLHAQHYIHRALAARNVLLDND 148
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGGS 328
VA+K L E +R + +E+ I+R + H ++V++ G C + +V E++ GS
Sbjct: 40 VAVKAL-KEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGS 98
Query: 329 IYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ DYL + GL LL A + +GM YLH + IHR L A N+L++ +
Sbjct: 99 LRDYLPRHCVGLAQLLLF--AQQICEGMAYLHAQHYIHRALAARNVLLDND 147
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 256 GSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACT 312
GS+ + L K Q+ A+KV++ + + +E +EV +++++ H N+++
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++V E +GG ++D + +K ++ R+ V G+ Y+H+N I+HRDLK
Sbjct: 121 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYMHKNKIVHRDLKPE 179
Query: 373 NLLMNENGVRDSDI 386
NLL+ E+ +D++I
Sbjct: 180 NLLL-ESKSKDANI 192
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 11/149 (7%)
Query: 255 SGSYCDLYKGAFFSQD------VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
SG++ +YKG + VAIKVL E+ + +E E ++M V V + +
Sbjct: 27 SGAFGTVYKGIWIPDGENVKIPVAIKVL-RENTSPKANKEILDEAYVMAGVGSPYVSRLL 85
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
G C + +VT+ M G + D++ + + L LL + ++KGM+YL ++HRD
Sbjct: 86 GICLTS-TVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRD 144
Query: 369 LKAANLLM-NENGVRDSDIHCYLSNFLSI 396
L A N+L+ + N V+ +D L+ L I
Sbjct: 145 LAARNVLVKSPNHVKITDFG--LARLLDI 171
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+L++V EF+ + D++ G+ LPL+ + +G+ + H + ++HRD
Sbjct: 70 VIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRD 128
Query: 369 LKAANLLMNENG 380
LK NLL+N G
Sbjct: 129 LKPENLLINTEG 140
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 75/158 (47%), Gaps = 17/158 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VAIK + NE + R EF
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-NEAASMRERIEFL 63
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK--------- 341
E +M++ +VV+ +G ++ ++ E M+ G + YL + ++
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
L ++++A +++ GM YL+ N +HRDL A N + E+
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAED 161
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI L G++ +YK V + +E ++ E+ I+
Sbjct: 37 DFWEIIGEL-------GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H N+V+ + A L+I+ EF +GG++ + + + L + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 358 YLHRNNIIHRDLKAANLLMNENG 380
YLH N IIHRDLKA N+L +G
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDG 172
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI L G++ +YK V + +E ++ E+ I+
Sbjct: 37 DFWEIIGEL-------GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H N+V+ + A L+I+ EF +GG++ + + + L + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 358 YLHRNNIIHRDLKAANLLMNENG 380
YLH N IIHRDLKA N+L +G
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDG 172
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K L + +E+ R++F +E ++ ++H ++V+F G CT L +V E+M G +
Sbjct: 74 VAVKAL--KEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 131
Query: 331 DYLHKQKCGLKL----------PL----LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+L KL PL LL VA V+ GM YL + +HRDL N L+
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 191
Query: 377 NEN 379
+
Sbjct: 192 GQG 194
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI L G++ +YK V + +E ++ E+ I+
Sbjct: 37 DFWEIIGEL-------GDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 89
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H N+V+ + A L+I+ EF +GG++ + + + L + V +N
Sbjct: 90 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 358 YLHRNNIIHRDLKAANLLMNENG 380
YLH N IIHRDLKA N+L +G
Sbjct: 150 YLHDNKIIHRDLKAGNILFTLDG 172
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K L + +E+ R++F +E ++ ++H ++V+F G CT L +V E+M G +
Sbjct: 51 VAVKAL--KEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 108
Query: 331 DYLHKQKCGLKL----------PL----LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+L KL PL LL VA V+ GM YL + +HRDL N L+
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 168
Query: 377 NEN 379
+
Sbjct: 169 GQG 171
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K L + +E+ R++F +E ++ ++H ++V+F G CT L +V E+M G +
Sbjct: 45 VAVKAL--KEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLN 102
Query: 331 DYLHKQKCGLKL----------PL----LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+L KL PL LL VA V+ GM YL + +HRDL N L+
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV 162
Query: 377 NEN 379
+
Sbjct: 163 GQG 165
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D WEI L G + +YK V + +E ++ E+ I+
Sbjct: 12 DFWEIIGEL---------GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILA 62
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
H N+V+ + A L+I+ EF +GG++ + + + L + V +N
Sbjct: 63 SCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 122
Query: 358 YLHRNNIIHRDLKAANLLMNENG 380
YLH N IIHRDLKA N+L +G
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDG 145
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K+L + + ++ + +E+ ++ RH ++++ + P +F+V E++SGG +
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGEL 103
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+DY+ K L R+ + G++Y HR+ ++HRDLK N+L++
Sbjct: 104 FDYICKNG-RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD 150
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 72/134 (53%), Gaps = 5/134 (3%)
Query: 256 GSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNVVQFIGACT 312
GS+ + L K Q+ A+KV++ + + +E +EV +++++ H N+ +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
++V E +GG ++D + +K ++ R+ V G+ Y H+N I+HRDLK
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-RIIRQVLSGITYXHKNKIVHRDLKPE 155
Query: 373 NLLMNENGVRDSDI 386
NLL+ E+ +D++I
Sbjct: 156 NLLL-ESKSKDANI 168
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+S G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 73 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 133 KPENLLINTEG 143
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+S G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 71 VIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 131 KPENLLINTEG 141
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 17/136 (12%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGAC---- 311
G Y ++++G + + VA+K+ ++ R E++ +RH N++ FI +
Sbjct: 19 GRYGEVWRGLWHGESVAVKIFSSRDEQSWFRE---TEIYNTVLLRHDNILGFIASDMTSR 75
Query: 312 TRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH--------RNN 363
+L+++T + GS+YD+L +Q L+ L LR+A+ + G+ +LH +
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQRQT--LEPHLALRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 364 IIHRDLKAANLLMNEN 379
I HRD K+ N+L+ N
Sbjct: 134 IAHRDFKSRNVLVKSN 149
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 252 KIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G++ +++K Q VA+K + E+ E +E+ I++ ++H NVV I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 310 ACTRPPRLFIVTEFMSGGSIY---DYLHKQKCGLKLPLLLRVAIDVSK--------GMNY 358
C R GSIY D+ GL +L++ + K G+ Y
Sbjct: 85 IC----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
+HRN I+HRD+KAAN+L+ +GV
Sbjct: 141 IHRNKILHRDMKAANVLITRDGV 163
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 31/170 (18%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFAQE 292
WE L + G + + K F VA+K+L E+ + + R+ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSE 76
Query: 293 VHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL------------------- 333
+++++V H +V++ GAC++ L ++ E+ GS+ +L
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 334 ----HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L + L+ A +S+GM YL +++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEG 186
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 252 KIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G++ +++K Q VA+K + E+ E +E+ I++ ++H NVV I
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 310 ACTRPPRLFIVTEFMSGGSIY---DYLHKQKCGLKLPLLLRVAIDVSK--------GMNY 358
C R GSIY D+ GL +L++ + K G+ Y
Sbjct: 84 IC----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
+HRN I+HRD+KAAN+L+ +GV
Sbjct: 140 IHRNKILHRDMKAANVLITRDGV 162
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH 301
ID L F K+ +L+KG + D+ +KVL + R+F +E +R H
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 302 MNVVQFIGACTRP--PRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNY 358
NV+ +GAC P P ++T + GS+Y+ LH+ + ++ A+D ++G +
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAF 126
Query: 359 LH 360
LH
Sbjct: 127 LH 128
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 17/143 (11%)
Query: 252 KIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G++ +++K Q VA+K + E+ E +E+ I++ ++H NVV I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 310 ACTRPPRLFIVTEFMSGGSIY---DYLHKQKCGLKLPLLLRVAIDVSK--------GMNY 358
C R GSIY D+ GL +L++ + K G+ Y
Sbjct: 85 IC----RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
+HRN I+HRD+KAAN+L+ +GV
Sbjct: 141 IHRNKILHRDMKAANVLITRDGV 163
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 26/200 (13%)
Query: 204 KEIPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYK 263
K+ PK + ++ + I+ +P + WE + L+F + +G++ + +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 264 GAFFSQD-------VAIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRP 314
F VA+K+L + H +E + E+ IM + +H N+V +GACT
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 315 PRLFIVTEFMSGGSIYDYLHKQ-------------KCGLKLPLLLRVAIDVSKGMNYLHR 361
+ ++TE+ G + ++L ++ L LL + V++GM +L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS 182
Query: 362 NNIIHRDLKAANLLMNENGV 381
N IHRD+ A N+L+ V
Sbjct: 183 KNCIHRDVAARNVLLTNGHV 202
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFAQE 292
WE L + G + + K F VA+K+L E+ + + R+ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSE 76
Query: 293 VHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL------------------- 333
+++++V H +V++ GAC++ L ++ E+ GS+ +L
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 334 ----HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L + L+ A +S+GM YL ++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 255 SGSYCDLYKGAFFSQDVAIKV-LTNEHLNENIRREFAQEV--HIMR--KVRHMNVVQFIG 309
SG + ++KG + + +IK+ + + + + R+ Q V H++ + H ++V+ +G
Sbjct: 41 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 100
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
C L +VT+++ GS+ D++ + + L LLL + ++KGM YL + ++HR+L
Sbjct: 101 LCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNL 159
Query: 370 KAANLLMN 377
A N+L+
Sbjct: 160 AARNVLLK 167
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 28/202 (13%)
Query: 204 KEIPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYK 263
K+ PK + ++ + I+ +P + WE + L+F + +G++ + +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 264 GAFFS---QD----VAIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRP 314
F +D VA+K+L + H +E + E+ IM + +H N+V +GACT
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 315 PRLFIVTEFMSGGSIYDYLHKQK-CGLKLPL--------------LLRVAIDVSKGMNYL 359
+ ++TE+ G + ++L +++ GL+ LL + V++GM +L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL 182
Query: 360 HRNNIIHRDLKAANLLMNENGV 381
N IHRD+ A N+L+ V
Sbjct: 183 ASKNCIHRDVAARNVLLTNGHV 204
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 31/170 (18%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFAQE 292
WE L + G + + K F VA+K+L E+ + + R+ E
Sbjct: 18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKML-KENASPSELRDLLSE 76
Query: 293 VHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL------------------- 333
+++++V H +V++ GAC++ L ++ E+ GS+ +L
Sbjct: 77 FNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 334 ----HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + L + L+ A +S+GM YL ++HRDL A N+L+ E
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG 186
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 255 SGSYCDLYKGAFFSQDVAIKV-LTNEHLNENIRREFAQEV--HIMR--KVRHMNVVQFIG 309
SG + ++KG + + +IK+ + + + + R+ Q V H++ + H ++V+ +G
Sbjct: 23 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
C L +VT+++ GS+ D++ + + L LLL + ++KGM YL + ++HR+L
Sbjct: 83 LCPGS-SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNL 141
Query: 370 KAANLLMN 377
A N+L+
Sbjct: 142 AARNVLLK 149
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 256 GSYCDLYKGAFFSQ-----DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
G + ++Y+G + + +VA+K + +N + +F E IM+ + H ++V+ IG
Sbjct: 35 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLDHPHIVKLIGI 93
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
P +I+ E G + YL + K LK+ L+ ++ + K M YL N +HRD+
Sbjct: 94 IEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIA 152
Query: 371 AANLLM 376
N+L+
Sbjct: 153 VRNILV 158
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 256 GSYCDLYKGAFFSQ-----DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
G + ++Y+G + + +VA+K + +N + +F E IM+ + H ++V+ IG
Sbjct: 19 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLDHPHIVKLIGI 77
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
P +I+ E G + YL + K LK+ L+ ++ + K M YL N +HRD+
Sbjct: 78 IEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIA 136
Query: 371 AANLLM 376
N+L+
Sbjct: 137 VRNILV 142
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+++ H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K L + ++N R++F +E ++ ++H ++V+F G C L +V E+M G +
Sbjct: 46 VAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLN 103
Query: 331 DYLHKQ------------KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
+L L +L +A ++ GM YL + +HRDL N L+ E
Sbjct: 104 KFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE 163
Query: 379 N 379
N
Sbjct: 164 N 164
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 256 GSYCDLYKGAFFSQ-----DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
G + ++Y+G + + +VA+K + +N + +F E IM+ + H ++V+ IG
Sbjct: 23 GFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDN-KEKFMSEAVIMKNLDHPHIVKLIGI 81
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
P +I+ E G + YL + K LK+ L+ ++ + K M YL N +HRD+
Sbjct: 82 IEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIA 140
Query: 371 AANLLM 376
N+L+
Sbjct: 141 VRNILV 146
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 249 FEHK--IVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVV 305
F+HK I G + +YKG VA+K T E + EF E+ + RH ++V
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLV 98
Query: 306 QFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-------LRVAIDVSKGMNY 358
IG C + ++ ++M G++ +L+ G LP + L + I ++G++Y
Sbjct: 99 SLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
LH IIHRD+K+ N+L++EN V
Sbjct: 155 LHTRAIIHRDVKSINILLDENFV 177
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 249 FEHK--IVSGSYCDLYKGAFF-SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVV 305
F+HK I G + +YKG VA+K T E + EF E+ + RH ++V
Sbjct: 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE--SSQGIEEFETEIETLSFCRHPHLV 98
Query: 306 QFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL-------LRVAIDVSKGMNY 358
IG C + ++ ++M G++ +L+ G LP + L + I ++G++Y
Sbjct: 99 SLIGFCDERNEMILIYKYMENGNLKRHLY----GSDLPTMSMSWEQRLEICIGAARGLHY 154
Query: 359 LHRNNIIHRDLKAANLLMNENGV 381
LH IIHRD+K+ N+L++EN V
Sbjct: 155 LHTRAIIHRDVKSINILLDENFV 177
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
DVAIKVL + + E +E IM ++ + +V+ IG C + L +V E GG +
Sbjct: 39 DVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL 96
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN-LLMNENGVRDSDI 386
+ +L ++ + + + + VS GM YL N +HRDL A N LL+N + + SD
Sbjct: 97 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 154
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 26/200 (13%)
Query: 204 KEIPKVENHHHVVYPVGEQEQSGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYK 263
K+ PK + ++ + I+ +P + WE + L+F + +G++ + +
Sbjct: 7 KQKPKYQVRWKIIESYEGNSYTFIDPTQLPYN--EKWEFPRNNLQFGKTLGAGAFGKVVE 64
Query: 264 GAFFSQD-------VAIKVL-TNEHLNENIRREFAQEVHIMRKV-RHMNVVQFIGACTRP 314
F VA+K+L + H +E + E+ IM + +H N+V +GACT
Sbjct: 65 ATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 315 PRLFIVTEFMSGGSIYDYLHKQKCGLKL-PL------------LLRVAIDVSKGMNYLHR 361
+ ++TE+ G + ++L ++ L+ P LL + V++GM +L
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182
Query: 362 NNIIHRDLKAANLLMNENGV 381
N IHRD+ A N+L+ V
Sbjct: 183 KNCIHRDVAARNVLLTNGHV 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 129 KPQNLLINTEG 139
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 129 KPQNLLINTEG 139
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 134 KPQNLLINTEG 144
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 247 LKFEHKIVSGSYCDLYKGA---------FFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
L F + G++ ++KG +V +KVL H N F + +M
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMS 67
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K+ H ++V G C +V EF+ GS+ YL K K + + L VA ++ M+
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMH 127
Query: 358 YLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNFLSIS 397
+L N +IH ++ A N+L+ +R+ D F+ +S
Sbjct: 128 FLEENTLIHGNVCAKNILL----IREEDRKTGNPPFIKLS 163
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 129 KPQNLLINTEG 139
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 73 VIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 133 KPQNLLINTEG 143
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 137 KPQNLLINTEG 147
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 131 KPQNLLINTEG 141
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 129 KPQNLLINTEG 139
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 131 KPENLLINTEG 141
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 76
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 77 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 136
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 137 KPQNLLINTEG 147
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 132 KPQNLLINTEG 142
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 132 KPENLLINTEG 142
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 131 KPQNLLINTEG 141
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 71 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 131 KPQNLLINTEG 141
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 133 KPQNLLINTEG 143
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 71
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 72 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 132 KPQNLLINTEG 142
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 73 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 133 KPQNLLINTEG 143
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 73
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 74 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 134 KPQNLLINTEG 144
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 244 ASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNE---HLNENIRREFAQEVHIMRKVR 300
+S K K+ +G+Y +YKG ++ + V E E +E+ +M++++
Sbjct: 4 SSQFKQLEKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 301 HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-----LKLPLLLRVAIDVSKG 355
H N+V+ +L +V EFM + Y+ + G L+L L+ + +G
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 356 MNYLHRNNIIHRDLKAANLLMNENG 380
+ + H N I+HRDLK NLL+N+ G
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRG 145
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K L + L R++F +E ++ ++H ++V+F G C L +V E+M G +
Sbjct: 48 VAVKALKDPTLAA--RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 331 DYL---------------HKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
+L + K L L +L +A ++ GM YL + +HRDL N L
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 165
Query: 376 MNEN 379
+ N
Sbjct: 166 VGAN 169
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 248 KFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNV 304
+FE KI G+ +Y Q+VAI+ + +L + ++E E+ +MR+ ++ N+
Sbjct: 25 RFE-KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNI 80
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V ++ + L++V E+++GGS+ D + + C + + V + + + +LH N +
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSNQV 138
Query: 365 IHRDLKAANLLMNENG 380
IHRD+K+ N+L+ +G
Sbjct: 139 IHRDIKSDNILLGMDG 154
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
DVAIKVL + + E +E IM ++ + +V+ IG C + L +V E GG +
Sbjct: 365 DVAIKVL-KQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL 422
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN-LLMNENGVRDSDI 386
+ +L ++ + + + + VS GM YL N +HR+L A N LL+N + + SD
Sbjct: 423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDF 480
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 68
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HRDL A N ++
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 248 KFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNV 304
+FE KI G+ +Y Q+VAI+ + +L + ++E E+ +MR+ ++ N+
Sbjct: 24 RFE-KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNI 79
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V ++ + L++V E+++GGS+ D + + C + + V + + + +LH N +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 365 IHRDLKAANLLMNENG 380
IHRD+K+ N+L+ +G
Sbjct: 138 IHRDIKSDNILLGMDG 153
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 65
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 66 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 125
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HRDL A N ++
Sbjct: 126 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 160
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 248 KFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNV 304
+FE KI G+ +Y Q+VAI+ + +L + ++E E+ +MR+ ++ N+
Sbjct: 24 RFE-KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNI 79
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V ++ + L++V E+++GGS+ D + + C + + V + + + +LH N +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 365 IHRDLKAANLLMNENG 380
IHRD+K+ N+L+ +G
Sbjct: 138 IHRDIKSDNILLGMDG 153
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 248 KFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNV 304
+FE KI G+ +Y Q+VAI+ + +L + ++E E+ +MR+ ++ N+
Sbjct: 24 RFE-KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNI 79
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V ++ + L++V E+++GGS+ D + + C + + V + + + +LH N +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 365 IHRDLKAANLLMNENG 380
IHRD+K+ N+L+ +G
Sbjct: 138 IHRDIKSDNILLGMDG 153
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 68
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HRDL A N ++
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 252 KIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G++ +++K Q VA+K + E+ E +E+ I++ ++H NVV I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHR 361
C + + S ++D+ GL +L++ + K G+ Y+HR
Sbjct: 85 ICRTKASPYNRCK-ASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 362 NNIIHRDLKAANLLMNENGV 381
N I+HRD+KAAN+L+ +GV
Sbjct: 144 NKILHRDMKAANVLITRDGV 163
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 33/173 (19%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVL-TNEHLNENIRREFAQ 291
WE + L+F + +G++ + + F VA+K+L + H +E +
Sbjct: 26 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADE--KEALMS 83
Query: 292 EVHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG----------- 339
E+ IM + +H N+V +GACT + ++TE+ G + ++L ++
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 340 -----------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L+L LL + V++GM +L N IHRD+ A N+L+ V
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHV 196
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 68
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HRDL A N ++
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 68
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HRDL A N ++
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 163
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 247 LKFEHKIVSGSYCDLYKGA---------FFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
L F + G++ ++KG +V +KVL H N F + +M
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMS 67
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
K+ H ++V G C +V EF+ GS+ YL K K + + L VA ++ M+
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMH 127
Query: 358 YLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNFLSIS 397
+L N +IH ++ A N+L+ +R+ D F+ +S
Sbjct: 128 FLEENTLIHGNVCAKNILL----IREEDRKTGNPPFIKLS 163
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 256 GSYCDLYK-----GAFFSQDVAIKVLTNEHLNENIR--REFAQEVHIMRKVRHMNVVQFI 308
G Y +++ GA + A+KVL + N + E +I+ +V+H +V I
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
A +L+++ E++SGG ++ L ++ ++ +A ++S + +LH+ II+RD
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLHQKGIIYRD 146
Query: 369 LKAANLLMNENGVRDSDIHCYLSNF 393
LK N+++N G H L++F
Sbjct: 147 LKPENIMLNHQG------HVKLTDF 165
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 256 GSYCDLYK-----GAFFSQDVAIKVLTNEHLNENIR--REFAQEVHIMRKVRHMNVVQFI 308
G Y +++ GA + A+KVL + N + E +I+ +V+H +V I
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLI 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
A +L+++ E++SGG ++ L ++ ++ +A ++S + +LH+ II+RD
Sbjct: 88 YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA-EISMALGHLHQKGIIYRD 146
Query: 369 LKAANLLMNENGVRDSDIHCYLSNF 393
LK N+++N G H L++F
Sbjct: 147 LKPENIMLNHQG------HVKLTDF 165
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G+Y +Y G S V I + + + +E+ + + ++H N+VQ++G+ +
Sbjct: 33 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG 92
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLK--LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
+ I E + GGS+ L + LK + + +G+ YLH N I+HRD+K N
Sbjct: 93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 152
Query: 374 LLMN 377
+L+N
Sbjct: 153 VLIN 156
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G+Y +Y G S V I + + + +E+ + + ++H N+VQ++G+ +
Sbjct: 19 GTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG 78
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLK--LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
+ I E + GGS+ L + LK + + +G+ YLH N I+HRD+K N
Sbjct: 79 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN 138
Query: 374 LLMN 377
+L+N
Sbjct: 139 VLIN 142
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 112
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 113 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 268 SQDVAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
VA+K+L + + ++ + +E+ ++ RH ++++ + P F+V E++SG
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
G ++DY+ K ++ R+ + ++Y HR+ ++HRDLK N+L++
Sbjct: 96 GELFDYICKHGRVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 268 SQDVAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
VA+K+L + + ++ + +E+ ++ RH ++++ + P F+V E++SG
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
G ++DY+ K ++ R+ + ++Y HR+ ++HRDLK N+L++
Sbjct: 96 GELFDYICKHGRVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 114
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 114
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 115 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 153
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 118
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 119 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 157
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 78 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 136
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 137 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 175
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTE--------FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
+L++V E FM ++ G+ LPL+ + +G+ + H
Sbjct: 69 VIHTENKLYLVFEHVHQDLKTFMDASAL--------TGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 362 NNIIHRDLKAANLLMNENG 380
+ ++HRDLK NLL+N G
Sbjct: 121 HRVLHRDLKPQNLLINTEG 139
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
Query: 281 LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL 340
L + R + + E+ I R + H +VV F G +F+V E S+ + LHK++ L
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKAL 138
Query: 341 KLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P + G YLHRN +IHRDLK NL +NE+
Sbjct: 139 TEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNED 177
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+ + + E + +E+ +++++ H N+V+ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 70 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 130 KPQNLLINTEG 140
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+ + + E + +E+ +++++ H N+V+ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 68
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+L++V EF+ G+ LPL+ + +G+ + H + ++HRDL
Sbjct: 69 VIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 370 KAANLLMNENG 380
K NLL+N G
Sbjct: 129 KPQNLLINTEG 139
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI G+Y +YK + VA+K + + E + +E+ +++++ H N+V+ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLD 72
Query: 310 ACTRPPRLFIVTE--------FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
+L++V E FM ++ G+ LPL+ + +G+ + H
Sbjct: 73 VIHTENKLYLVFEHVDQDLKKFMDASAL--------TGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 362 NNIIHRDLKAANLLMNENG 380
+ ++HRDLK NLL+N G
Sbjct: 125 HRVLHRDLKPQNLLINTEG 143
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 268 SQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
+ VA+K + L + RRE EV IMR H NVV + L++V EF+ G
Sbjct: 70 GKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEG 126
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
G++ D + + + + V + V + ++YLH +IHRD+K+ ++L+ +G
Sbjct: 127 GALTDIVTHTR--MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG 178
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 255 SGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTR 313
+G C L + + VA+K++ L + RRE EV IMR +H NVV+ +
Sbjct: 58 TGIVC-LAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 314 PPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
L+++ EF+ GG++ D + + + L + V V + + YLH +IHRD+K+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS 171
Query: 374 LLMNENG-VRDSD 385
+L+ +G V+ SD
Sbjct: 172 ILLTLDGRVKLSD 184
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 88
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 149 ASKKFVHRDLAARNCMLDE 167
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 49 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 107
Query: 301 HMNVVQFIGACTRP-PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 168 ASKKFVHRDLAARNCMLDE 186
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 82
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 140
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 141 KYLEESNFVHRDLAARNVLL 160
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 82
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 140
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 141 KYLEESNFVHRDLAARNVLL 160
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 89
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 150 ASKKFVHRDLAARNCMLDE 168
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 50 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 108
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 169 ASKKFVHRDLAARNCMLDE 187
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 30 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 88
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 149 ASKKFVHRDLAARNCMLDE 167
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 89
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 150 ASKKFVHRDLAARNCMLDE 168
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 87
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 148 ASKKFVHRDLAARNCMLDE 166
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 84
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 145 ASKKFVHRDLAARNCMLDE 163
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 365 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 424
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGM 482
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 483 KYLEESNFVHRDLAARNVLL 502
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 366 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 425
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGM 483
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 484 KYLEESNFVHRDLAARNVLL 503
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 28 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 86
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 147 ASKKFVHRDLAARNCMLDE 165
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK--CGLKLPLLLRVA 349
E+ ++RK++H N+V P L++V + +SGG ++D + ++ L+R
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLL 375
+D + YLHR I+HRDLK NLL
Sbjct: 130 LD---AVYYLHRMGIVHRDLKPENLL 152
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 73 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 130
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 131 KYLEESNFVHRDLAARNVLL 150
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 23 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 81
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM YL
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 142 ASKKFVHRDLAARNCMLDE 160
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 21 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 80
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 81 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 138
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 139 KYLEESNFVHRDLAARNVLL 158
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFF-------SQDVAIKVLTNEHLNENIRREFAQE 292
WE L+F + SG++ + + S VA+K+L E + + R E
Sbjct: 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-KEKADSSEREALMSE 98
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG------------ 339
+ +M ++ H N+V +GACT ++++ E+ G + +YL ++
Sbjct: 99 LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQK 158
Query: 340 ----------LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L LL A V+KGM +L + +HRDL A N+L+ V
Sbjct: 159 RLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV 210
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 69
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 70 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 129
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HR+L A N ++
Sbjct: 130 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMV 164
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 60
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 118
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 119 KYLEESNFVHRDLAARNVLL 138
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKG-------AFFSQDVAIKVLTNEHLNENIRREFA 290
D WE+ + ++ GS+ +Y+G VA+K + NE + R EF
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-NESASLRERIEFL 68
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPL 344
E +M+ +VV+ +G ++ +V E M+ G + YL + G P
Sbjct: 69 NEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 128
Query: 345 L---LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L +++A +++ GM YL+ +HR+L A N ++
Sbjct: 129 LQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMV 163
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 124
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 125 KYLEESNFVHRDLAARNVLL 144
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 248 KFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNV 304
+FE KI G+ +Y Q+VAI+ + +L + ++E E+ +MR+ ++ N+
Sbjct: 25 RFE-KIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVMRENKNPNI 80
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V ++ + L++V E+++GGS+ D + + C + + V + + + +LH N +
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETC-MDEGQIAAVCRECLQALEFLHSNQV 138
Query: 365 IHRDLKAANLLMNENG 380
IHR++K+ N+L+ +G
Sbjct: 139 IHRNIKSDNILLGMDG 154
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 62
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 120
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 121 KYLEESNFVHRDLAARNVLL 140
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 22/137 (16%)
Query: 269 QDVAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
Q VA+K ++ + L + ++ +E+ ++ +RH ++++ T P + +V E+ +GG
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGG 93
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMNEN 379
++DY+ ++K R+ D + + Y HR+ I+HRDLK NLL+++N
Sbjct: 94 ELFDYIVEKK---------RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN 144
Query: 380 -GVRDSDIHCYLSNFLS 395
V+ +D LSN ++
Sbjct: 145 LNVKIADFG--LSNIMT 159
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 242 IDASLLKFEHK-IVSGSYCDLYKGAF----FSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
+D LL E K + SG++ + KG + + VA+K+L NE + ++ E E ++M
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 66
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
+++ + +V+ IG C +V E G + YL + + +K ++ + VS GM
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGM 124
Query: 357 NYLHRNNIIHRDLKAANLLM 376
YL +N +HRDL A N+L+
Sbjct: 125 KYLEESNFVHRDLAARNVLL 144
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 291 QEVHIM-------RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP 343
+E HIM + V+H +V + +L+ V ++++GG ++ +L +++C L+ P
Sbjct: 81 EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLE-P 139
Query: 344 LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
A +++ + YLH NI++RDLK N+L++ G H L++F
Sbjct: 140 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG------HIVLTDF 183
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 91
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 91
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ NG
Sbjct: 100 YRELQKLSRFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSNG 149
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 91
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ NG
Sbjct: 100 YRELQKLSRFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSNG 149
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 95 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 153
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 154 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 204
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 91
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 33 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 91
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 92 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 36 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 94
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 95 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 145
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 60 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 118
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 119 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 169
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
V + L + + IR + +E+ ++ + +V F GA + I E M GGS+
Sbjct: 52 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL- 110
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
D + K+ + +L +V+I V KG+ YL ++ I+HRD+K +N+L+N G
Sbjct: 111 DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 161
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 148
Query: 301 HMNVVQFIGACTRP-PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 209 ASKKFVHRDLAARNCMLDE 227
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 247 LKFEHKIVSGSYCDLYKGAFFSQDVAI---KVLTNEHLNENIRREFAQEVHIMRKVRHMN 303
+ E KI G + ++Y+ A V + KV + ++ R + +E+ +++++ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSI---YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH 360
V+++ + L IV E G + + KQK + + + + + + ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 361 RNNIIHRDLKAANLLMNENGV 381
++HRD+K AN+ + GV
Sbjct: 154 SRRVMHRDIKPANVFITATGV 174
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 252 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
K+ G+Y +YKG D VA+K + EH E +EV +++ ++H N+V
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEH-EEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCG--LKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
L +V E++ + YL CG + + + + +G+ Y HR ++HR
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHR 124
Query: 368 DLKAANLLMNENG 380
DLK NLL+NE G
Sbjct: 125 DLKPQNLLINERG 137
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 269 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH------MNVVQFIGACTRPPRLFIVTE 322
Q VA+K++ NE + R+ A+E+ I+ +R MNV+ + T + + E
Sbjct: 123 QHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE 179
Query: 323 FMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG- 380
+S ++Y+ + K K G LPL+ + A + + ++ LH+N IIH DLK N+L+ + G
Sbjct: 180 LLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR 238
Query: 381 ----VRDSDIHCY 389
V D CY
Sbjct: 239 SGIKVIDFGSSCY 251
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 29 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 87
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 148 ASKKFVHRDLAARNCMLDE 166
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 89
Query: 301 HMNVVQFIGACTRP-PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 150 ASKKFVHRDLAARNCMLDE 168
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 269 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH------MNVVQFIGACTRPPRLFIVTE 322
Q VA+K++ NE + R+ A+E+ I+ +R MNV+ + T + + E
Sbjct: 123 QHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE 179
Query: 323 FMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG- 380
+S ++Y+ + K K G LPL+ + A + + ++ LH+N IIH DLK N+L+ + G
Sbjct: 180 LLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR 238
Query: 381 ----VRDSDIHCY 389
V D CY
Sbjct: 239 SGIKVIDFGSSCY 251
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 36 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 94
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 155 ASKKFVHRDLAARNCMLDE 173
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 31 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 89
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 150 ASKKFVHRDLAARNCMLDE 168
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 90
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 151 ASKKFVHRDLAARNCMLDE 169
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQD-----VAIKVLTNEHLNENIRREFAQEVHIMRKVR 300
++ F I G + +Y G D A+K L N + +F E IM+
Sbjct: 32 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSL-NRITDIGEVSQFLTEGIIMKDFS 90
Query: 301 HMNVVQFIGACTRPP-RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYL 359
H NV+ +G C R +V +M G + +++ + + L+ + V+KGM +L
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 360 HRNNIIHRDLKAANLLMNE 378
+HRDL A N +++E
Sbjct: 151 ASKKFVHRDLAARNCMLDE 169
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 269 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRH------MNVVQFIGACTRPPRLFIVTE 322
Q VA+K++ NE + R+ A+E+ I+ +R MNV+ + T + + E
Sbjct: 123 QHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFE 179
Query: 323 FMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG- 380
+S ++Y+ + K K G LPL+ + A + + ++ LH+N IIH DLK N+L+ + G
Sbjct: 180 LLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR 238
Query: 381 ----VRDSDIHCY 389
V D CY
Sbjct: 239 SGIKVIDFGSSCY 251
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 252 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
K+ G+Y +YK A SQ VA+K + + +E I +E+ +++++ H N+V I
Sbjct: 28 KVGEGTYGVVYK-AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +V EFM + L + K GL+ + + +G+ + H++ I+HRDL
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 370 KAANLLMNENGV 381
K NLL+N +G
Sbjct: 146 KPQNLLINSDGA 157
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H NV+ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+NYLH I H DLK N+++
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 252 KIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
K+ G+Y +YK A SQ VA+K + + +E I +E+ +++++ H N+V I
Sbjct: 28 KVGEGTYGVVYK-AKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +V EFM + L + K GL+ + + +G+ + H++ I+HRDL
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 370 KAANLLMNENGV 381
K NLL+N +G
Sbjct: 146 KPQNLLINSDGA 157
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 252 KIVSGSYCD--LYKGAFFSQDVAIKVLTNEHL--------NENIRR---EFAQEVHIMRK 298
K+ SG+Y + L K + AIKV+ N+NI + E E+ +++
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 299 VRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYL---HK-QKCGLKLPLLLRVAIDVSK 354
+ H N+++ ++VTEF GG +++ + HK +C + +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDA-----ANIMKQILS 157
Query: 355 GMNYLHRNNIIHRDLKAANLLM-NENGVRDSDIHCY-LSNFLS 395
G+ YLH++NI+HRD+K N+L+ N+N + + I + LS+F S
Sbjct: 158 GICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H NV+ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+NYLH I H DLK N+++
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 251 HKIVSGSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI GS+ L K + IK + ++ R E +EV ++ ++H N+VQ+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGL-KLPLLLRVAIDVSKGMNYLHRNNIIHR 367
+ L+IV ++ GG ++ ++ QK L + +L + + + ++H I+HR
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149
Query: 368 DLKAANLLMNENGV 381
D+K+ N+ + ++G
Sbjct: 150 DIKSQNIFLTKDGT 163
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H NV+ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+NYLH I H DLK N+++
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H NV+ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+NYLH I H DLK N+++
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H NV+ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+NYLH I H DLK N+++
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 7/133 (5%)
Query: 253 IVSGSYCDLYKGAFFSQ-----DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
I G + +Y G + Q AIK L+ + + F +E +MR + H NV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVE-AFLREGLLMRGLNHPNVLAL 87
Query: 308 IGACTRPPRL-FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIH 366
IG P L ++ +M G + ++ + + L+ + V++GM YL +H
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVH 147
Query: 367 RDLKAANLLMNEN 379
RDL A N +++E+
Sbjct: 148 RDLAARNCMLDES 160
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSG 326
SQ+ A+K++ E +IR +EV ++ + + H NV++ I R ++V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
GSI ++HK++ +L + V DV+ +++LH I HRDLK N+L
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENIL 143
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 272 AIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYD 331
A+KVL L R E I+ V H VV+ A +L+++ +F+ GG ++
Sbjct: 60 AMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFT 119
Query: 332 YLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLS 391
L K+ + + +A +++ G+++LH II+RDLK N+L++E G H L+
Sbjct: 120 RLSKEVMFTEEDVKFYLA-ELALGLDHLHSLGIIYRDLKPENILLDEEG------HIKLT 172
Query: 392 NF 393
+F
Sbjct: 173 DF 174
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 252 KIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
KI G+Y +YK + + A+K + E +E I +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
RL +V E + + L + GL+ + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 371 AANLLMNENG 380
NLL+N G
Sbjct: 128 PQNLLINREG 137
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSG 326
SQ+ A+K++ E +IR +EV ++ + + H NV++ I R ++V E M G
Sbjct: 38 SQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG 95
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
GSI ++HK++ +L + V DV+ +++LH I HRDLK N+L
Sbjct: 96 GSILSHIHKRRHFNELEASV-VVQDVASALDFLHNKGIAHRDLKPENIL 143
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 252 KIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
KI G+Y +YK + + A+K + E +E I +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
RL +V E + + L + GL+ + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 371 AANLLMNENG 380
NLL+N G
Sbjct: 128 PQNLLINREG 137
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 3/132 (2%)
Query: 252 KIVSGSYCDLYK--GAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
KI GSY ++K Q VAIK + I++ +E+ ++++++H N+V +
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
R RL +V E+ +++ L + + G+ L+ + + +N+ H++N IHRD+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHE-LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128
Query: 370 KAANLLMNENGV 381
K N+L+ ++ V
Sbjct: 129 KPENILITKHSV 140
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 252 KIVSGSYCDLYKGAF-FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGA 310
KI G+Y +YK + + A+K + E +E I +E+ I+++++H N+V+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
RL +V E + + L + GL+ + + G+ Y H ++HRDLK
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLK 127
Query: 371 AANLLMNENG 380
NLL+N G
Sbjct: 128 PQNLLINREG 137
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 11/133 (8%)
Query: 253 IVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACT 312
+ G+ D+ KG ++ VA+K + NE + R EF E +M+ +VV+ +G +
Sbjct: 32 VYEGNARDIIKGEAETR-VAVKTV-NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS 89
Query: 313 RPPRLFIVTEFMSGGSIYDYLH------KQKCGLKLPLL---LRVAIDVSKGMNYLHRNN 363
+ +V E M+ G + YL + G P L +++A +++ GM YL+
Sbjct: 90 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK 149
Query: 364 IIHRDLKAANLLM 376
+HRDL A N ++
Sbjct: 150 FVHRDLAARNCMV 162
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 8/132 (6%)
Query: 256 GSYCDLYKG--AFFSQDVAIKVLTNEHLNE---NIRREFAQEVHIMRKVRHMNVVQFIGA 310
G + +YK +Q VAIK + H +E I R +E+ +++++ H N++ + A
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 311 CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVS-KGMNYLHRNNIIHRDL 369
+ +V +FM + + + K + P ++ + ++ +G+ YLH++ I+HRDL
Sbjct: 81 FGHKSNISLVFDFME--TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDL 138
Query: 370 KAANLLMNENGV 381
K NLL++ENGV
Sbjct: 139 KPNNLLLDENGV 150
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV+I+R++RH N++ + ++ E +SGG ++D+L +K L
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ + G++YLH I H DLK N+++ + V
Sbjct: 118 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 153
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G + ++K ++ VA+K+ + ++ + E+ EV+ + ++H N++QFIGA R
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQD-KQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 316 R----LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN--------- 362
L+++T F GS+ D+L + L +A +++G+ YLH +
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 363 -NIIHRDLKAANLLMNEN 379
I HRD+K+ N+L+ N
Sbjct: 150 PAISHRDIKSKNVLLKNN 167
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQ-EVHIMRKVRHMNVVQFIGACTRP-PRLFIVTEFMSGGSI 329
A+KV+ E +N++ ++ Q E H+ + + + + +C + RLF V E+++GG +
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 108
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
++ +Q+ KLP + ++S +NYLH II+RDLK N+L++ G
Sbjct: 109 MFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 158
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQ-EVHIMRKVRHMNVVQFIGACTRP-PRLFIVTEFMSGGSI 329
A+KV+ E +N++ ++ Q E H+ + + + + +C + RLF V E+++GG +
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 93
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
++ +Q+ KLP + ++S +NYLH II+RDLK N+L++ G
Sbjct: 94 MFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 143
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQ-EVHIMRKVRHMNVVQFIGACTRP-PRLFIVTEFMSGGSI 329
A+KV+ E +N++ ++ Q E H+ + + + + +C + RLF V E+++GG +
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 97
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
++ +Q+ KLP + ++S +NYLH II+RDLK N+L++ G
Sbjct: 98 MFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 147
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 251 HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI G+Y ++K + VA+K + + +E + +E+ ++++++H N+V+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+L +V EF + Y L ++ + KG+ + H N++HRD
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 369 LKAANLLMNENG 380
LK NLL+N NG
Sbjct: 127 LKPQNLLINRNG 138
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G + ++K + VA+K+ L + + +E+ ++H N++QFI A R
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 316 ----RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN--------- 362
L+++T F GS+ DYL + L VA +S+G++YLH +
Sbjct: 83 NLEVELWLITAFHDKGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 363 --NIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+I HRD K+ N+L+ SD+ L++F
Sbjct: 141 KPSIAHRDFKSKNVLLK------SDLTAVLADF 167
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 251 HKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
KI G+Y ++K + VA+K + + +E + +E+ ++++++H N+V+
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 309 GACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRD 368
+L +V EF + Y L ++ + KG+ + H N++HRD
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRD 126
Query: 369 LKAANLLMNENG 380
LK NLL+N NG
Sbjct: 127 LKPQNLLINRNG 138
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRP--PRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
QE+ I++K+ H NVV+ + P L++V E ++ G + +++P L +
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV----------MEVPTLKPL 134
Query: 349 AIDVS--------KGMNYLHRNNIIHRDLKAANLLMNENG 380
+ D + KG+ YLH IIHRD+K +NLL+ E+G
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG 174
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK++ L ++ R E+ ++ +RH ++ Q ++F+V E+ GG ++
Sbjct: 38 VAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF 96
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
DY+ Q L V + + Y+H HRDLK NLL +E
Sbjct: 97 DYIISQD-RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDE 143
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 262 YKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVT 321
Y +++ +++ EH N+ E ++ V H +++ G ++F++
Sbjct: 34 YAMKVLKKEIVVRLKQVEHTND--------ERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85
Query: 322 EFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+++ GG ++ L K + P+ A +V + YLH +II+RDLK N+L+++NG
Sbjct: 86 DYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG 143
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV I+R+V H N++ + ++ E +SGG ++D+L QK L
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEA 117
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+NYLH I H DLK N+++ + +
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV+I+R++RH N++ + ++ E +SGG ++D+L +K L
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA 110
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ + G++YLH I H DLK N+++ + V
Sbjct: 111 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R E +EV+I+R++RH N++ + ++ E +SGG ++D+L +K L
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEA 131
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ + G++YLH I H DLK N+++ + V
Sbjct: 132 TQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 167
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 285 IRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP- 343
IR + +E+ ++ + +V F GA + I E M GGS+ L + K ++P
Sbjct: 57 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPE 113
Query: 344 -LLLRVAIDVSKGMNYL-HRNNIIHRDLKAANLLMNENG 380
+L +V+I V +G+ YL ++ I+HRD+K +N+L+N G
Sbjct: 114 EILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG 152
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKE----IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKE----IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKE----IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 57 VAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSD 385
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G V+ SD
Sbjct: 114 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 168
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 59 VAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSD 385
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G V+ SD
Sbjct: 116 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 170
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 52 VAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSD 385
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G V+ SD
Sbjct: 109 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 163
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 101 YKELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 48 VAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSD 385
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G V+ SD
Sbjct: 105 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 159
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G +
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEV 100
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 101 YKELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKKVIHRDIKPENLLLGSAG 145
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 92
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 93 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 142
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 94
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 95 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 144
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQ-EVHIMRKVRHMNVVQFIGACTRP-PRLFIVTEFMSGGSI 329
A++V+ E +N++ ++ Q E H+ + + + + +C + RLF V E+++GG +
Sbjct: 81 AMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL 140
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
++ +Q+ KLP + ++S +NYLH II+RDLK N+L++ G
Sbjct: 141 MFHMQRQR---KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 190
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 97 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 252 KIVSGSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
K+ SG+Y + L + + AIK++ ++ + + +EV +++ + H N+++
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 310 ACTRPPRLFIVTEFMSGGSIYD-YLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
++V E GG ++D +H+ K + ++++ V G+ YLH++NI+HR
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK---QVLSGVTYLHKHNIVHR 160
Query: 368 DLKAANLLM 376
DLK NLL+
Sbjct: 161 DLKPENLLL 169
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 99
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 100 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 149
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 101 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 101 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 98 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 147
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 38 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 97
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 98 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 147
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 239 VWEIDASLLKFEHKIVSGSY---CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHI 295
WE+ A + + SG+Y C G ++ VAIK L +E + +E+ +
Sbjct: 20 AWEVRAVYRDLQ-PVGSGAYGAVCSAVDGRTGAK-VAIKKLYRPFQSELFAKRAYRELRL 77
Query: 296 MRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVA 349
++ +RH NV+ + T L ++V FM G + + +K G L
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFL--V 134
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ KG+ Y+H IIHRDLK NL +NE+
Sbjct: 135 YQMLKGLRYIHAAGIIHRDLKPGNLAVNED 164
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 97 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 96
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 97 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 146
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 122 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 283 ENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK 341
+ +R +EV I+RKV H N++Q F+V + M G ++DYL +K L
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLS 122
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
++ + + + LH+ NI+HRDLK N+L+ D D++ L++F
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILL------DDDMNIKLTDF 168
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 243 DASLLKFEHKIVSGSY--CDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKV 299
D+ F I SG++ L + + VA+K + ++EN++RE R +
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH----RSL 73
Query: 300 RHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----- 354
RH N+V+F P L I+ E+ SGG +Y+ + C R + D ++
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERI----CNAG-----RFSEDEARFFFQQ 124
Query: 355 ---GMNYLHRNNIIHRDLKAANLLMN 377
G++Y H I HRDLK N L++
Sbjct: 125 LLSGVSYCHSMQICHRDLKLENTLLD 150
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 62 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 121
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 122 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 171
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 179 VAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G
Sbjct: 236 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 100
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 101 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 150
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 33 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 88
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 89 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 138
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 98
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 99 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 148
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 95
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 96 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 145
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 283 ENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK 341
+ +R +EV I+RKV H N++Q F+V + M G ++DYL +K L
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLS 122
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
++ + + + LH+ NI+HRDLK N+L+ D D++ L++F
Sbjct: 123 EKETRKIMRALLEVICALHKLNIVHRDLKPENILL------DDDMNIKLTDF 168
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E I + + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIC----INKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK + E L E E+ ++ K++H N+V L+++ + +SGG ++
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
D + +K R+ V + YLH I+HRDLK NLL D D +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---LDEDSKIMI 160
Query: 391 SNF 393
S+F
Sbjct: 161 SDF 163
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L + + + +EV I +RH N+++ G R++++ E+ G++
Sbjct: 53 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV 112
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLL+ G
Sbjct: 113 YRELQKLSKFDEQRTATYI-------TELANALSYCHSKRVIHRDIKPENLLLGSAG 162
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + + H NVV+F G ++ E+ SGG
Sbjct: 34 VAVKIVDMKRAVDCPENIKKE----ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 89
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 90 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
Query: 271 VAIKVLTNEHLNENIRREFA-QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + L + RRE EV IMR +H NVV+ + L++V EF+ GG++
Sbjct: 102 VAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSD 385
D + + + + V + V + ++ LH +IHRD+K+ ++L+ +G V+ SD
Sbjct: 159 TDIVTHTRMNEE--QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSD 213
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 24/134 (17%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VA+K+L E + +++ +F +E +M + + N+V+ +G C + ++ E+M+ G +
Sbjct: 80 VAVKML-KEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 331 DYLHKQK----CGLK--------------LPLL-----LRVAIDVSKGMNYLHRNNIIHR 367
++L C L P L L +A V+ GM YL +HR
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR 198
Query: 368 DLKAANLLMNENGV 381
DL N L+ EN V
Sbjct: 199 DLATRNCLVGENMV 212
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 283 ENIRREFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK 341
+ +R +EV I+RKV H N++Q F+V + M G ++DYL +K L
Sbjct: 51 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLS 109
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
++ + + + LH+ NI+HRDLK N+L+ D D++ L++F
Sbjct: 110 EKETRKIMRALLEVICALHKLNIVHRDLKPENILL------DDDMNIKLTDF 155
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
K+ G+Y ++YK ++ VAIK + EH E + +EV ++++++H N+++
Sbjct: 41 KLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS 100
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
RL ++ E+ + + Y+ K + + ++ + G+N+ H +HRDL
Sbjct: 101 VIHHNHRLHLIFEY-AENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCLHRDL 158
Query: 370 KAANLLMNENGVRDSDI 386
K NLL++ + ++ +
Sbjct: 159 KPQNLLLSVSDASETPV 175
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK + E L E E+ ++ K++H N+V L+++ + +SGG ++
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
D + +K R+ V + YLH I+HRDLK NLL D D +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---LDEDSKIMI 160
Query: 391 SNF 393
S+F
Sbjct: 161 SDF 163
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK + E L E E+ ++ K++H N+V L+++ + +SGG ++
Sbjct: 46 VAIKCIAKEAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
D + +K R+ V + YLH I+HRDLK NLL D D +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---LDEDSKIMI 160
Query: 391 SNF 393
S+F
Sbjct: 161 SDF 163
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 29/168 (17%)
Query: 242 IDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRK--V 299
+D LK I G Y +YKG+ + VA+KV + + R+ F E +I R +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLM 64
Query: 300 RHMNVVQFIGA---CTRPPRL--FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK 354
H N+ +FI T R+ +V E+ GS+ YL R+A V++
Sbjct: 65 EHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSS--CRLAHSVTR 122
Query: 355 GMNYLH---------RNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
G+ YLH + I HRDL + N+L+ +G C +S+F
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT------CVISDF 164
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Query: 252 KIVSGSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRR-EFAQEVHIMRKVRHMNVVQFI 308
K+ SG+Y + L K + AIK++ + EV +++++ H N+++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 309 GACTRPPRLFIVTEFMSGGSIYD--YLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIH 366
++V E GG ++D L ++ + ++++ V G YLH++NI+H
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTTYLHKHNIVH 127
Query: 367 RDLKAANLLMNENGVRDS 384
RDLK NLL+ E+ RD+
Sbjct: 128 RDLKPENLLL-ESKSRDA 144
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 9/140 (6%)
Query: 252 KIVSGSYCD--LYKGAFFSQDVAIKVLTNEHLNENIRR-EFAQEVHIMRKVRHMNVVQFI 308
K+ SG+Y + L K + AIK++ + EV +++++ H N+++
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 309 GACTRPPRLFIVTEFMSGGSIYD--YLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIH 366
++V E GG ++D L ++ + ++++ V G YLH++NI+H
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QVLSGTTYLHKHNIVH 144
Query: 367 RDLKAANLLMNENGVRDSDI 386
RDLK NLL+ E+ RD+ I
Sbjct: 145 RDLKPENLLL-ESKSRDALI 163
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 269 QDVAIKVLTNE-HLNENIRREFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEF 323
+DVA+KVL + + + F +E + H +V G P P +IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 324 MSGGSIYDYLHKQKCGLKLP-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ G ++ D +H + G P + V D + +N+ H+N IIHRD+K AN+L++
Sbjct: 98 VDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS 150
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 303 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN 362
N V+ + A + LFI E+ G++YD +H + + R+ + + ++Y+H
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 363 NIIHRDLKAANLLMNEN 379
IIHRDLK N+ ++E+
Sbjct: 136 GIIHRDLKPMNIFIDES 152
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 243 DASLLKFEHKIVSGSYCDLY-----KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D S + + GS+ ++ G+ Q A+KVL L R E I+
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
+V H +V+ A +L+++ +F+ GG ++ L K+ + + +A +++ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALD 140
Query: 358 YLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+LH II+RDLK N+L++E G H L++F
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEG------HIKLTDF 170
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 271 VAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + E ++EN++RE R +RH N+V+F P L IV E+ SGG +
Sbjct: 46 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMN 377
++ + C R + D ++ G++Y H + HRDLK N L++
Sbjct: 102 FERI----CNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 148
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 271 VAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + E ++EN++RE R +RH N+V+F P L IV E+ SGG +
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMN 377
++ + C R + D ++ G++Y H + HRDLK N L++
Sbjct: 103 FERI----CNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 271 VAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + E ++EN++RE R +RH N+V+F P L IV E+ SGG +
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMN 377
++ + C R + D ++ G++Y H + HRDLK N L++
Sbjct: 103 FERI----CNAG-----RFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLD 149
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 22/116 (18%)
Query: 271 VAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + E ++EN++RE R +RH N+V+F P L IV E+ SGG +
Sbjct: 47 VAVKYIERGEKIDENVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMN 377
++ + C R + D ++ G++Y H + HRDLK N L++
Sbjct: 103 FERI----CNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF--IGACTRPPRLFIVTEFMSGGSI 329
AIKV N + + +E +++K+ H N+V+ I T ++ EF GS+
Sbjct: 38 AIKVFNNISFLRPVDVQM-REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL 96
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLL--MNENG 380
Y L + LP L V DV GMN+L N I+HR++K N++ + E+G
Sbjct: 97 YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 243 DASLLKFEHKIVSGSYCDLY-----KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D S + + GS+ ++ G+ Q A+KVL L R E I+
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 82
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
+V H +V+ A +L+++ +F+ GG ++ L K+ + + +A +++ ++
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALD 141
Query: 358 YLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+LH II+RDLK N+L++E G H L++F
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEG------HIKLTDF 171
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 243 DASLLKFEHKIVSGSYCDLY-----KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D S + + GS+ ++ G+ Q A+KVL L R E I+
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILV 81
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN 357
+V H +V+ A +L+++ +F+ GG ++ L K+ + + +A +++ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALALD 140
Query: 358 YLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+LH II+RDLK N+L++E G H L++F
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEG------HIKLTDF 170
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 271 VAIKVLTNEH---LNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
VA+K++ + ENI++E + I + H NVV+F G ++ E+ SGG
Sbjct: 35 VAVKIVDMKRAVDCPENIKKE----ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
++D + G+ P R + G+ YLH I HRD+K NLL++E
Sbjct: 91 ELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 37/195 (18%)
Query: 225 SGINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAI-------KVLT 277
SG + + + +++ E+ L+ + G + +Y+ +QDV ++L+
Sbjct: 11 SGRDQSDFVGQTVELGELR---LRVRRVLAEGGFAFVYE----AQDVGSGREYALKRLLS 63
Query: 278 NEHLNENIRREFAQEVHIMRKVR-HMNVVQFIGAC--------TRPPRLFIVTEFMSGGS 328
NE E R QEV M+K+ H N+VQF A T ++TE G
Sbjct: 64 NE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG-Q 119
Query: 329 IYDYLHK--QKCGLKLPLLLRVAIDVSKGMNYLHRNN--IIHRDLKAANLLMNENGVRDS 384
+ ++L K + L +L++ + + ++HR IIHRDLK NLL++ G
Sbjct: 120 LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT--- 176
Query: 385 DIHCYLSNFLSISTV 399
L +F S +T+
Sbjct: 177 ---IKLCDFGSATTI 188
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNE-HLNENIR 286
+H+ P+ D +E+ +L F S L + +DVA+KVL + + +
Sbjct: 2 SHMTTPSHLSDRYEL-GEILGFGGM----SEVHLARDLRLHRDVAVKVLRADLARDPSFY 56
Query: 287 REFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEFMSGGSIYDYLHKQKCGLKL 342
F +E + H +V G P P +IV E++ G ++ D +H + G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMT 114
Query: 343 P-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
P + V D + +N+ H+N IIHRD+K AN++++
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 272 AIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF--IGACTRPPRLFIVTEFMSGGSI 329
AIKV N + + +E +++K+ H N+V+ I T ++ EF GS+
Sbjct: 38 AIKVFNNISFLRPVDVQM-REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSL 96
Query: 330 YDYLHKQKCGLKLPL--LLRVAIDVSKGMNYLHRNNIIHRDLKAANLL--MNENG 380
Y L + LP L V DV GMN+L N I+HR++K N++ + E+G
Sbjct: 97 YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDG 151
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNE-HLNENIR 286
+H+ P+ D +E+ +L F S L + +DVA+KVL + + +
Sbjct: 2 SHMTTPSHLSDRYEL-GEILGFGGM----SEVHLARDLRLHRDVAVKVLRADLARDPSFY 56
Query: 287 REFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEFMSGGSIYDYLHKQKCGLKL 342
F +E + H +V G P P +IV E++ G ++ D +H + G
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMT 114
Query: 343 P-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
P + V D + +N+ H+N IIHRD+K AN++++
Sbjct: 115 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 269 QDVAIKVLTNE-HLNENIRREFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEF 323
+DVA+KVL + + + F +E + H +V G P P +IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 324 MSGGSIYDYLHKQKCGLKLP-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ G ++ D +H + G P + V D + +N+ H+N IIHRD+K AN++++
Sbjct: 98 VDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 286 RREFAQEVHIM-RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+R+ +E+ I+ R +H N++ +++VTE M GG + D + +QK
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-FSERE 117
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLL-MNENG----VRDSDIH------------ 387
V ++K + YLH ++HRDLK +N+L ++E+G +R D
Sbjct: 118 ASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 388 ---CYLSNFLS 395
CY +NF++
Sbjct: 178 MTPCYTANFVA 188
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L E + + +E+ I +RH N+++ R++++ EF G +
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLLM G
Sbjct: 102 YKELQKHGRFDEQRSATFME-------ELADALHYCHERKVIHRDIKPENLLMGYKG 151
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 269 QDVAIKVLTNE-HLNENIRREFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEF 323
+DVA+KVL + + + F +E + H +V G P P +IV E+
Sbjct: 38 RDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEY 97
Query: 324 MSGGSIYDYLHKQKCGLKLP-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ G ++ D +H + G P + V D + +N+ H+N IIHRD+K AN++++
Sbjct: 98 VDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L E + + +E+ I +RH N+++ R++++ EF G +
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLLM G
Sbjct: 102 YKELQKHGRFDEQRSATFME-------ELADALHYCHERKVIHRDIKPENLLMGYKG 151
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 271 VAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+A+KVL L E + + +E+ I +RH N+++ R++++ EF G +
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 330 YDYLHK------QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
Y L K Q+ + +++ ++Y H +IHRD+K NLLM G
Sbjct: 103 YKELQKHGRFDEQRSATFME-------ELADALHYCHERKVIHRDIKPENLLMGYKG 152
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 228 NHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNE-HLNENIR 286
+H+ P+ D +E+ +L F S L + +DVA+KVL + + +
Sbjct: 19 SHMTTPSHLSDRYEL-GEILGFGGM----SEVHLARDLRLHRDVAVKVLRADLARDPSFY 73
Query: 287 REFAQEVHIMRKVRHMNVVQF--IGACTRP--PRLFIVTEFMSGGSIYDYLHKQKCGLKL 342
F +E + H +V G P P +IV E++ G ++ D +H + G
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMT 131
Query: 343 P-LLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
P + V D + +N+ H+N IIHRD+K AN++++
Sbjct: 132 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 167
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E+ +++K++H N+V ++V + +SGG ++D + ++ + L V
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-VIQQ 114
Query: 352 VSKGMNYLHRNNIIHRDLKAANLL 375
V + YLH N I+HRDLK NLL
Sbjct: 115 VLSAVKYLHENGIVHRDLKPENLL 138
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Query: 271 VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
VAIK + + L E E+ ++ K++H N+V L+++ + +SGG ++
Sbjct: 46 VAIKCIAKKAL-EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF 104
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
D + +K R+ V + YLH I+HRDLK NLL D D +
Sbjct: 105 DRI-VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---LDEDSKIMI 160
Query: 391 SNF 393
S+F
Sbjct: 161 SDF 163
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 279 EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC 338
++ E++ R F QE+ IM+ + H N+++ +++V E +GG +++ + ++
Sbjct: 61 KYFVEDVDR-FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV 119
Query: 339 GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ R+ DV + Y H+ N+ HRDLK N L
Sbjct: 120 -FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 156
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 279 EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC 338
++ E++ R F QE+ IM+ + H N+++ +++V E +GG +++ + ++
Sbjct: 44 KYFVEDVDR-FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV 102
Query: 339 GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ R+ DV + Y H+ N+ HRDLK N L
Sbjct: 103 -FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
Q VA+K++ + L +++ +E+ +R +RH ++++ + +V E+ +G
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 87
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 385
++DY+ Q+ + R + + Y HR+ I+HRDLK NLL++E+ V+ +D
Sbjct: 88 NELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 146
Query: 386 IHCYLSNFLS 395
LSN ++
Sbjct: 147 FG--LSNIMT 154
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 248 KFEHKIVSGSYCDLY--KGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRKVRHMNV 304
K K+ G +Y + + VAIK + E + F +EVH ++ H N+
Sbjct: 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLH 360
V I ++V E++ G ++ +Y+ PL + AI+ + G+ + H
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAH 128
Query: 361 RNNIIHRDLKAANLLMNEN 379
I+HRD+K N+L++ N
Sbjct: 129 DMRIVHRDIKPQNILIDSN 147
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 24/157 (15%)
Query: 241 EIDASLLKFEHKIVSG-----------SYCDLYKGAFFSQ-----------DVAIKVLTN 278
+I A F+H+IV+ S ++ G F Q +A K++
Sbjct: 65 DIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT 124
Query: 279 EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC 338
+ + + E E+ +M ++ H N++Q A + +V E++ GG ++D + +
Sbjct: 125 RGMKD--KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESY 182
Query: 339 GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L + + +G+ ++H+ I+H DLK N+L
Sbjct: 183 NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENIL 219
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
Q VA+K++ + L +++ +E+ +R +RH ++++ + +V E+ +G
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 97
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 385
++DY+ Q+ + R + + Y HR+ I+HRDLK NLL++E+ V+ +D
Sbjct: 98 NELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 156
Query: 386 IHCYLSNFLS 395
LSN ++
Sbjct: 157 FG--LSNIMT 164
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 239 VWEIDASLLKFEHKIVSGSY---CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHI 295
VWE+ L + SG+Y C Y A Q VA+K L+ + R +E+ +
Sbjct: 23 VWEVPQRLQGL-RPVGSGAYGSVCSAYD-ARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVA 349
++ ++H NV+ + T + ++VT M G + + + Q + L
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHVQFL--V 137
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H IIHRDLK +N+ +NE+
Sbjct: 138 YQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
Q VA+K++ + L +++ +E+ +R +RH ++++ + +V E+ +G
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 96
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 385
++DY+ Q+ + R + + Y HR+ I+HRDLK NLL++E+ V+ +D
Sbjct: 97 NELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 155
Query: 386 IHCYLSNFLS 395
LSN ++
Sbjct: 156 FG--LSNIMT 163
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAIK+++ RE E+ I++K+ H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 303 NVVQ---FIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVS 353
+++ F A +IV E M GG ++D L + C L +L
Sbjct: 76 CIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL------ 125
Query: 354 KGMNYLHRNNIIHRDLKAANLLMN 377
+ YLH N IIHRDLK N+L++
Sbjct: 126 -AVQYLHENGIIHRDLKPENVLLS 148
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAIK+++ RE E+ I++K+ H
Sbjct: 15 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 74
Query: 303 NVVQ---FIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVS 353
+++ F A +IV E M GG ++D L + C L +L
Sbjct: 75 CIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL------ 124
Query: 354 KGMNYLHRNNIIHRDLKAANLLMN 377
+ YLH N IIHRDLK N+L++
Sbjct: 125 -AVQYLHENGIIHRDLKPENVLLS 147
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
Q VA+K++ + L +++ +E+ +R +RH ++++ + +V E+ +G
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY-AG 91
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN-GVRDSD 385
++DY+ Q+ + R + + Y HR+ I+HRDLK NLL++E+ V+ +D
Sbjct: 92 NELFDYI-VQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIAD 150
Query: 386 IHCYLSNFLS 395
LSN ++
Sbjct: 151 FG--LSNIMT 158
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAIK+++ RE E+ I++K+ H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 303 NVVQ---FIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVS 353
+++ F A +IV E M GG ++D L + C L +L
Sbjct: 76 CIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL------ 125
Query: 354 KGMNYLHRNNIIHRDLKAANLLMN 377
+ YLH N IIHRDLK N+L++
Sbjct: 126 -AVQYLHENGIIHRDLKPENVLLS 148
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 35 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 94
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 95 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 147
Query: 387 HCYLSNF 393
H +++F
Sbjct: 148 HIQITDF 154
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
+ A K + H E+ + +E+ M +RH +V A + ++ EFMSGG
Sbjct: 76 GNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 133
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+++ + + + + V KG+ ++H NN +H DLK N++
Sbjct: 134 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 182
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 32 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 91
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 92 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 144
Query: 387 HCYLSNF 393
H +++F
Sbjct: 145 HIQITDF 151
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 34 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 93
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 94 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 146
Query: 387 HCYLSNF 393
H +++F
Sbjct: 147 HIQITDF 153
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAIK+++ RE E+ I++K+ H
Sbjct: 16 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 75
Query: 303 NVVQ---FIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVS 353
+++ F A +IV E M GG ++D L + C L +L
Sbjct: 76 CIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL------ 125
Query: 354 KGMNYLHRNNIIHRDLKAANLLMN 377
+ YLH N IIHRDLK N+L++
Sbjct: 126 -AVQYLHENGIIHRDLKPENVLLS 148
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 39 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 98
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 99 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 151
Query: 387 HCYLSNF 393
H +++F
Sbjct: 152 HIQITDF 158
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 54 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 113
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 166
Query: 387 HCYLSNF 393
H +++F
Sbjct: 167 HIQITDF 173
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 33 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 92
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 93 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 145
Query: 387 HCYLSNF 393
H +++F
Sbjct: 146 HIQITDF 152
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 167
Query: 387 HCYLSNF 393
H +++F
Sbjct: 168 HIQITDF 174
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 58 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 117
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 170
Query: 387 HCYLSNF 393
H +++F
Sbjct: 171 HIQITDF 177
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 54 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 113
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 114 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 166
Query: 387 HCYLSNF 393
H +++F
Sbjct: 167 HIQITDF 173
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 167
Query: 387 HCYLSNF 393
H +++F
Sbjct: 168 HIQITDF 174
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 58 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 117
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 118 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 170
Query: 387 HCYLSNF 393
H +++F
Sbjct: 171 HIQITDF 177
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 167
Query: 387 HCYLSNF 393
H +++F
Sbjct: 168 HIQITDF 174
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 60 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 119
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 120 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 172
Query: 387 HCYLSNF 393
H +++F
Sbjct: 173 HIQITDF 179
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 55 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 114
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 115 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 167
Query: 387 HCYLSNF 393
H +++F
Sbjct: 168 HIQITDF 174
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
+ A K + H E+ + +E+ M +RH +V A + ++ EFMSGG
Sbjct: 182 GNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGG 239
Query: 328 SIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+++ + + + + V KG+ ++H NN +H DLK N++
Sbjct: 240 ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF 288
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAIK+++ RE E+ I++K+ H
Sbjct: 22 KTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHP 81
Query: 303 NVVQ---FIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVS 353
+++ F A +IV E M GG ++D L + C L +L
Sbjct: 82 CIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL------ 131
Query: 354 KGMNYLHRNNIIHRDLKAANLLMN 377
+ YLH N IIHRDLK N+L++
Sbjct: 132 -AVQYLHENGIIHRDLKPENVLLS 154
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 57 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKN 116
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 117 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 169
Query: 387 HCYLSNF 393
H +++F
Sbjct: 170 HIQITDF 176
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 268 SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSG 326
S++ AIK+L H+ EN +E +M ++ H V+ +L+ +
Sbjct: 62 SREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKN 121
Query: 327 GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDI 386
G + Y+ K + A ++ + YLH IIHRDLK N+L+NE D+
Sbjct: 122 GELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKGIIHRDLKPENILLNE------DM 174
Query: 387 HCYLSNF 393
H +++F
Sbjct: 175 HIQITDF 181
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSY---CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHI 295
VWE+ L + SG+Y C Y A Q VA+K L+ + R +E+ +
Sbjct: 23 VWEVPQRLQGL-RPVGSGAYGSVCSAYD-ARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRV 348
++ ++H NV+ + T + ++VT M D + KC L + +
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA----DLNNIVKCQALSDEHVQFL 136
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H IIHRDLK +N+ +NE+
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH---KQKCGLKLPLLLRV 348
E I+ KV +V A L +V M+GG I +++ + G + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
+ G+ +LH+ NII+RDLK N+L++++G VR SD+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 286 RREFAQEVHIM-RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQK--CGLKL 342
+R+ ++E+ I+ R +H N++ +++VTE M GG + D + +QK +
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 343 PLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL-MNENG 380
+L + K + YLH ++HRDLK +N+L ++E+G
Sbjct: 124 SFVLHT---IGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH---KQKCGLKLPLLLRV 348
E I+ KV +V A L +V M+GG I +++ + G + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
+ G+ +LH+ NII+RDLK N+L++++G VR SD+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH---KQKCGLKLPLLLRV 348
E I+ KV +V A L +V M+GG I +++ + G + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
+ G+ +LH+ NII+RDLK N+L++++G VR SD+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLH---KQKCGLKLPLLLRV 348
E I+ KV +V A L +V M+GG I +++ + G + P +
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
+ G+ +LH+ NII+RDLK N+L++++G VR SD+
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSY---CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHI 295
VWE+ L + SG+Y C Y A Q VA+K L+ + R +E+ +
Sbjct: 15 VWEVPQRLQGL-RPVGSGAYGSVCSAYD-ARLRQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 296 MRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRV 348
++ ++H NV+ + T + ++VT M D + KC L + +
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGA----DLNNIVKCQALSDEHVQFL 128
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H IIHRDLK +N+ +NE+
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 159
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 286 RREFAQEVHIM-RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+R+ ++E+ I+ R +H N++ +++VTE M GG + D + +QK +
Sbjct: 64 KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREA 123
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLL-MNENG 380
V + K + YLH ++HRDLK +N+L ++E+G
Sbjct: 124 SF-VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 286 RREFAQEVHIM-RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+R+ +E+ I+ R +H N++ +++VTE GG + D + +QK
Sbjct: 59 KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-FSERE 117
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLL-MNENGVRDS 384
V ++K + YLH ++HRDLK +N+L ++E+G +S
Sbjct: 118 ASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 231 NIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQ---DVAIKVLTNEHLNENIRR 287
++P + D++++ + LL G+Y + +GA Q + A+K++ E + R
Sbjct: 5 SLPGKFEDMYKLTSELLG------EGAYAKV-QGAVSLQNGKEYAVKII--EKQAGHSRS 55
Query: 288 EFAQEVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLL 346
+EV + + + + N+++ I R ++V E + GGSI ++ KQK
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK-HFNEREAS 114
Query: 347 RVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
RV DV+ +++LH I HRDLK N+L
Sbjct: 115 RVVRDVAAALDFLHTKGIAHRDLKPENIL 143
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
RL+ V E+++GG + H Q+ G K P + A ++S G+ +LH+ II+RDLK N+
Sbjct: 94 RLYFVMEYVNGGDLM--YHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNV 151
Query: 375 LMNENG 380
+++ G
Sbjct: 152 MLDSEG 157
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 31/159 (19%)
Query: 236 GIDVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHI 295
G+D EI+ I SG + ++K + ++ NE RE V
Sbjct: 10 GMDFKEIEL--------IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKA 57
Query: 296 MRKVRHMNVVQFIGAC----------------TRPPRLFIVTEFMSGGSIYDYLHKQKCG 339
+ K+ H+N+V + G ++ LFI EF G++ ++ K++ G
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-G 116
Query: 340 LKLPLLLRVAI--DVSKGMNYLHRNNIIHRDLKAANLLM 376
KL +L + + ++KG++Y+H +I+RDLK +N+ +
Sbjct: 117 EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 19/124 (15%)
Query: 261 LYKGAFFSQDVAIKVLTNEHLNENIRREFA-QEVHIMRKV-RHMNVVQFIGACTRPPRLF 318
+Y+G F ++DVA+K + E + FA +EV ++R+ H NV+++ CT R F
Sbjct: 41 VYRGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYF--CTEKDRQF 92
Query: 319 --IVTEFMSGGSIYDYLHKQK---CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
I E + ++ +Y+ ++ GL+ LL+ + G+ +LH NI+HRDLK N
Sbjct: 93 QYIAIE-LCAATLQEYVEQKDFAHLGLEPITLLQ---QTTSGLAHLHSLNIVHRDLKPHN 148
Query: 374 LLMN 377
+L++
Sbjct: 149 ILIS 152
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAI++++ RE E+ I++K+ H
Sbjct: 155 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 214
Query: 303 NVVQFIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVSKGM 356
+++ I +IV E M GG ++D L + C L +L +
Sbjct: 215 CIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 266
Query: 357 NYLHRNNIIHRDLKAANLLMN 377
YLH N IIHRDLK N+L++
Sbjct: 267 QYLHENGIIHRDLKPENVLLS 287
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 23/141 (16%)
Query: 252 KIVSGSYCDLYKGAF---FSQDVAIKVLTNEHLNENIRRE------FAQEVHIMRKVRHM 302
K + C K AF + VAI++++ RE E+ I++K+ H
Sbjct: 141 KTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHP 200
Query: 303 NVVQFIGACTRPPRLFIVTEFMSGGSIYDY------LHKQKCGLKLPLLLRVAIDVSKGM 356
+++ I +IV E M GG ++D L + C L +L +
Sbjct: 201 CIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL-------AV 252
Query: 357 NYLHRNNIIHRDLKAANLLMN 377
YLH N IIHRDLK N+L++
Sbjct: 253 QYLHENGIIHRDLKPENVLLS 273
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 272 AIKVLTNEHLNENIRREFAQ-EVHIMRKVR-HMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
A+KVL + + ++ E E I+ R H + Q P RLF V EF++GG +
Sbjct: 52 AVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL 111
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCY 389
++ K + A ++ + +LH II+RDLK N+L++ G HC
Sbjct: 112 MFHIQKSR-RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG------HCK 164
Query: 390 LSNF 393
L++F
Sbjct: 165 LADF 168
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 303 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN 362
N V+ + A + LFI E+ ++YD +H + + R+ + + ++Y+H
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 363 NIIHRDLKAANLLMNEN 379
IIHRDLK N+ ++E+
Sbjct: 136 GIIHRDLKPMNIFIDES 152
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 22/116 (18%)
Query: 271 VAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+K + E + N++RE R +RH N+V+F P L IV E+ SGG +
Sbjct: 47 VAVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSK--------GMNYLHRNNIIHRDLKAANLLMN 377
++ + C R + D ++ G++Y H + HRDLK N L++
Sbjct: 103 FERI----CNAG-----RFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLD 149
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 238 DVWEIDASLLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMR 297
D +E+++ L + IV Y KG + A+KVL + +++ I R E+ ++
Sbjct: 53 DFFEVESELGRGATSIV---YRCKQKGT--QKPYALKVL-KKTVDKKIVR---TEIGVLL 103
Query: 298 KVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK--- 354
++ H N+++ P + +V E ++GG ++D + ++ + R A D K
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQIL 158
Query: 355 -GMNYLHRNNIIHRDLKAANLL 375
+ YLH N I+HRDLK NLL
Sbjct: 159 EAVAYLHENGIVHRDLKPENLL 180
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAI--DVSKGMNYLHRNNIIHRDLKAANL 374
LFI EF G++ ++ K++ G KL +L + + ++KG++Y+H +IHRDLK +N+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 375 LM 376
+
Sbjct: 168 FL 169
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 290 AQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVA 349
A+E+ + +V GA P + I E + GGS+ + +Q C L L
Sbjct: 133 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYL 191
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+G+ YLH I+H D+KA N+L++ +G H L +F
Sbjct: 192 GQALEGLEYLHSRRILHGDVKADNVLLSSDGS-----HAALCDF 230
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 290 AQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVA 349
A+E+ + +V GA P + I E + GGS+ + +Q C L L
Sbjct: 114 AEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYL 172
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
+G+ YLH I+H D+KA N+L++ +G H L +F
Sbjct: 173 GQALEGLEYLHSRRILHGDVKADNVLLSSDGS-----HAALCDF 211
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 260 DLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQFIGACT---- 312
DL G F ++V T E E + +EV ++R + H NVV+ CT
Sbjct: 32 DLKNGGRFVALKRVRVQTGE---EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88
Query: 313 -RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
R +L +V E + + YL K + G+ + + + +G+++LH + ++HRDLK
Sbjct: 89 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 371 AANLLMNENG 380
N+L+ +G
Sbjct: 148 PQNILVTSSG 157
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI-YDYLHKQKCGLKLPLLLRVAI 350
E I+ KV VV A L +V M+GG + + H + G + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
++ G+ LHR I++RDLK N+L++++G +R SD+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL 330
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 260 DLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQFIGACT---- 312
DL G F ++V T E E + +EV ++R + H NVV+ CT
Sbjct: 32 DLKNGGRFVALKRVRVQTGE---EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88
Query: 313 -RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
R +L +V E + + YL K + G+ + + + +G+++LH + ++HRDLK
Sbjct: 89 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 371 AANLLMNENG 380
N+L+ +G
Sbjct: 148 PQNILVTSSG 157
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI-YDYLHKQKCGLKLPLLLRVAI 350
E I+ KV VV A L +V M+GG + + H + G + A
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAA 293
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG-VRDSDI 386
++ G+ LHR I++RDLK N+L++++G +R SD+
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDL 330
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
WE+ + + H + SG+Y + + VAIK L+ +E + +E+ ++
Sbjct: 19 AWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL 77
Query: 297 RKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRV 348
+ ++H NV+ + T L ++V FM ++ GLK + +
Sbjct: 78 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDL------QKIMGLKFSEEKIQYL 131
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ KG+ Y+H ++HRDLK NL +NE+
Sbjct: 132 VYQMLKGLKYIHSAGVVHRDLKPGNLAVNED 162
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 260 DLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQFIGACT---- 312
DL G F ++V T E E + +EV ++R + H NVV+ CT
Sbjct: 32 DLKNGGRFVALKRVRVQTGE---EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88
Query: 313 -RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLK 370
R +L +V E + + YL K + G+ + + + +G+++LH + ++HRDLK
Sbjct: 89 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLK 147
Query: 371 AANLLMNENG 380
N+L+ +G
Sbjct: 148 PQNILVTSSG 157
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTE 322
K F + V +L H E + + E+ I + + + +VV F G +++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKM----STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 323 FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
S+ + LHK++ + P +G+ YLH N +IHRDLK NL +N++
Sbjct: 123 ICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTE 322
K F + V +L H E + + E+ I + + + +VV F G +++V E
Sbjct: 51 KEVFAGKVVPKSMLLKPHQKEKM----STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 106
Query: 323 FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
S+ + LHK++ + P +G+ YLH N +IHRDLK NL +N++
Sbjct: 107 ICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 162
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 115
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAF--FSQDVAIKVLTNEHLNENIRREFAQEVHI-M 296
W+ A LK +I G+Y + K Q +A+K + + ++E +++ ++ + M
Sbjct: 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST-VDEKEQKQLLMDLDVVM 75
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGG--SIYDYLHKQKCGLKLP--LLLRVAIDV 352
R +VQF GA R +I E MS Y Y++ + +P +L ++ +
Sbjct: 76 RSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDV-IPEEILGKITLAT 134
Query: 353 SKGMNYLHRN-NIIHRDLKAANLLMNENG 380
K +N+L N IIHRD+K +N+L++ +G
Sbjct: 135 VKALNHLKENLKIIHRDIKPSNILLDRSG 163
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTE 322
K F + V +L H E + + E+ I + + + +VV F G +++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKM----STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 323 FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
S+ + LHK++ + P +G+ YLH N +IHRDLK NL +N++
Sbjct: 123 ICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 115
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 5/117 (4%)
Query: 263 KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTE 322
K F + V +L H E + + E+ I + + + +VV F G +++V E
Sbjct: 67 KEVFAGKVVPKSMLLKPHQKEKM----STEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLE 122
Query: 323 FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
S+ + LHK++ + P +G+ YLH N +IHRDLK NL +N++
Sbjct: 123 ICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDD 178
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 268 SQDVAIKVLTNE-HLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP-------RLFI 319
Q VAIK + N + N +R +E+ I++ +H N++ I RP +++
Sbjct: 79 GQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIA-IKDILRPTVPYGEFKSVYV 136
Query: 320 VTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
V + M ++ +H + L L + + +G+ Y+H +IHRDLK +NLL+NEN
Sbjct: 137 VLDLMES-DLHQIIHSSQP-LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 194
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF Q+ A K++ + L+ ++ +E I R ++H N+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ + ++V + ++GG ++ +Y + + +L + +N+ H N
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL-------ESVNHCHLNG 123
Query: 364 IIHRDLKAANLLM 376
I+HRDLK NLL+
Sbjct: 124 IVHRDLKPENLLL 136
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 12/120 (10%)
Query: 268 SQDVAIKVLTNE-HLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP-------RLFI 319
Q VAIK + N + N +R +E+ I++ +H N++ I RP +++
Sbjct: 80 GQQVAIKKIPNAFDVVTNAKRTL-RELKILKHFKHDNIIA-IKDILRPTVPYGEFKSVYV 137
Query: 320 VTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
V + M ++ +H + L L + + +G+ Y+H +IHRDLK +NLL+NEN
Sbjct: 138 VLDLMES-DLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNEN 195
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 67/133 (50%), Gaps = 23/133 (17%)
Query: 260 DLYKGAFF----------SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF +Q+ A K++ + L+ ++ +E I R ++H N+V+
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 97
Query: 310 ACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ + ++V + ++GG ++ +Y + + +L + +N++H+++
Sbjct: 98 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQIL-------ESVNHIHQHD 150
Query: 364 IIHRDLKAANLLM 376
I+HRDLK NLL+
Sbjct: 151 IVHRDLKPENLLL 163
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 242 IDASLLKFEHKIVSG--SYCDLYKGAFFSQDVAIK-VLTNEHLNENIRREFAQEVHIMRK 298
ID F K+ G SY DL +G A+K +L +E + R E +E + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHRL 82
Query: 299 VRHMNVVQFIGACTRPP----RLFIVTEFMSGGSIYDYLHKQKCG---LKLPLLLRVAID 351
H N+++ + C R +++ F G++++ + + K L +L + +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ +G+ +H HRDLK N+L+ + G
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEG 171
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 23/133 (17%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF Q+ A K++ + L+ ++ +E I R ++H N+V+
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 310 ACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ + ++V + ++GG ++ +Y + + +L + +N+ H N
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL-------ESVNHCHLNG 123
Query: 364 IIHRDLKAANLLM 376
I+HRDLK NLL+
Sbjct: 124 IVHRDLKPENLLL 136
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 272 AIKVLTNEHLNE-NIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
A+K + + E N R +E+ IM+ + H +V + +F+V + + GG +
Sbjct: 44 AMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR 103
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG---VRDSDIH 387
+L +Q K + ++ ++YL IIHRD+K N+L++E+G + D +I
Sbjct: 104 YHL-QQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Query: 388 CYLSNFLSISTV 399
L I+T+
Sbjct: 163 AMLPRETQITTM 174
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ G+ YLH I H DLK N+++
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + ++VT M G +Y L Q L
Sbjct: 90 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYLVTHLM-GADLYKLLKTQH--LSNDH 145
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 286 RREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
R + +EV I+++++H NV+ + ++ E ++GG ++D+L +K L
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEA 116
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I H DLK N+++ + V
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQ 306
+I G+Y +YK VA+K + + E + +EV ++R++ H NVV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 307 FIGAC--TRPPRLFIVTEFMS--GGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLHR 361
+ C +R R VT + YL K GL + + +G+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 130
Query: 362 NNIIHRDLKAANLLMNENGV 381
N I+HRDLK N+L+ G
Sbjct: 131 NCIVHRDLKPENILVTSGGT 150
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 269 QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHM-NVVQFIGACTRPPRLFIVTEFMSGG 327
Q+ A K L ++ R E E+ ++ + V+ + ++ E+ +GG
Sbjct: 55 QEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114
Query: 328 SIYDYLHKQKCGLKLPLL---------LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
I+ L LP L +R+ + +G+ YLH+NNI+H DLK N+L++
Sbjct: 115 EIF--------SLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQ 306
+I G+Y +YK VA+K + + E + +EV ++R++ H NVV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 307 FIGACT-----RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLH 360
+ C R ++ +V E + + YL K GL + + +G+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 361 RNNIIHRDLKAANLLMNENGV 381
N I+HRDLK N+L+ G
Sbjct: 130 ANCIVHRDLKPENILVTSGGT 150
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 252 KIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMNVVQ 306
+I G+Y +YK VA+K + + E + +EV ++R++ H NVV+
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 307 FIGACT-----RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMNYLH 360
+ C R ++ +V E + + YL K GL + + +G+++LH
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 361 RNNIIHRDLKAANLLMNENGV 381
N I+HRDLK N+L+ G
Sbjct: 130 ANCIVHRDLKPENILVTSGGT 150
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 303 NVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRN 362
N V+ A + LFI E+ ++YD +H + + R+ + + ++Y+H
Sbjct: 76 NFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 363 NIIHRDLKAANLLMNEN 379
IIHR+LK N+ ++E+
Sbjct: 136 GIIHRNLKPXNIFIDES 152
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
WE+ + + H + SG+Y + + VAIK L+ +E + +E+ ++
Sbjct: 37 AWELPKTYVSPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLL 95
Query: 297 RKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAI 350
+ ++H NV+ + T L ++V FM + + + K+ L+ +
Sbjct: 96 KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQYLVYQML 154
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
KG+ Y+H ++HRDLK NL +NE+
Sbjct: 155 ---KGLKYIHSAGVVHRDLKPGNLAVNED 180
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 288 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDY------LHKQ-KCGL 340
+F E+ I+ +++ + G T ++I+ E+M SI + L K C +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 341 KLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANLLMNENG-VRDSDI 386
+ ++ + V +Y+H NI HRD+K +N+LM++NG V+ SD
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+V GA P + I E + GGS+ + + C L L +G+ YLH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRR 186
Query: 364 IIHRDLKAANLLMNENGVR 382
I+H D+KA N+L++ +G R
Sbjct: 187 ILHGDVKADNVLLSSDGSR 205
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 251 HKIVSGSY--CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+ I +GSY C + + + K L + E ++ EV+++R+++H N+V++
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 309 GACT--RPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
L+IV E+ GG + + K++ L +LRV ++ + HR +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 364 -----IIHRDLKAANLLMN 377
++HRDLK AN+ ++
Sbjct: 132 DGGHTVLHRDLKPANVFLD 150
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 251 HKIVSGSY--CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+ I +GSY C + + + K L + E ++ EV+++R+++H N+V++
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 309 GACT--RPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
L+IV E+ GG + + K++ L +LRV ++ + HR +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 364 -----IIHRDLKAANLLMN 377
++HRDLK AN+ ++
Sbjct: 132 DGGHTVLHRDLKPANVFLD 150
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 251 HKIVSGSY--CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFI 308
+ I +GSY C + + + K L + E ++ EV+++R+++H N+V++
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 309 GACT--RPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
L+IV E+ GG + + K++ L +LRV ++ + HR +
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 364 -----IIHRDLKAANLLMN 377
++HRDLK AN+ ++
Sbjct: 132 DGGHTVLHRDLKPANVFLD 150
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 252 KIVSGSYCDLYK------GAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNV 304
KI SG + ++K G ++ + K L +N RE +A V +H +V
Sbjct: 14 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV----LGQHSHV 69
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
V++ A + I E+ +GGS+ D + ++ K L + + V +G+ Y+H
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 362 NNIIHRDLKAANLLMNENGVRDS 384
+++H D+K +N+ ++ + ++
Sbjct: 130 MSLVHMDIKPSNIFISRTSIPNA 152
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+V GA P + I E + GGS+ + + C L L +G+ YLH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRR 184
Query: 364 IIHRDLKAANLLMNENGVR 382
I+H D+KA N+L++ +G R
Sbjct: 185 ILHGDVKADNVLLSSDGSR 203
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+V GA P + I E + GGS+ + + C L L +G+ YLH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLHTRR 170
Query: 364 IIHRDLKAANLLMNENGVR 382
I+H D+KA N+L++ +G R
Sbjct: 171 ILHGDVKADNVLLSSDGSR 189
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKSQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 252 KIVSGSYCDLYK------GAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNV 304
KI SG + ++K G ++ + K L +N RE +A V +H +V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV----LGQHSHV 71
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
V++ A + I E+ +GGS+ D + ++ K L + + V +G+ Y+H
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 362 NNIIHRDLKAANLLMNENGVRDS 384
+++H D+K +N+ ++ + ++
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNA 154
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 44/84 (52%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E+ IM ++ H ++ A + ++ EF+SGG ++D + + + ++
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 352 VSKGMNYLHRNNIIHRDLKAANLL 375
+G+ ++H ++I+H D+K N++
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIM 181
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 252 KIVSGSYCDLYK------GAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNV 304
KI SG + ++K G ++ + K L +N RE +A V +H +V
Sbjct: 16 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV----LGQHSHV 71
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
V++ A + I E+ +GGS+ D + ++ K L + + V +G+ Y+H
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 362 NNIIHRDLKAANLLMNENGVRDS 384
+++H D+K +N+ ++ + ++
Sbjct: 132 MSLVHMDIKPSNIFISRTSIPNA 154
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 75
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQK 337
+ I+ + H+NVV +GACT+P L ++ EF G++ YL ++
Sbjct: 76 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 22 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQK 337
+ I+ + H+NVV +GACT+P L ++ EF G++ YL ++
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 236
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 271 VAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
VA+KVL + E + + +E+ I + H N+++ R++++ E+ G +
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL 110
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
Y L K C + +++ + Y H +IHRD+K N
Sbjct: 111 YKELQKS-CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 14/143 (9%)
Query: 252 KIVSGSYCDLYK------GAFFSQDVAIKVLTNEHLNENIRRE-FAQEVHIMRKVRHMNV 304
KI SG + ++K G ++ + K L +N RE +A V +H +V
Sbjct: 18 KIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAV----LGQHSHV 73
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYL---HKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
V++ A + I E+ +GGS+ D + ++ K L + + V +G+ Y+H
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 362 NNIIHRDLKAANLLMNENGVRDS 384
+++H D+K +N+ ++ + ++
Sbjct: 134 MSLVHMDIKPSNIFISRTSIPNA 156
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 24 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 82
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQK 337
+ I+ + H+NVV +GACT+P L ++ EF G++ YL ++
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 129
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFSQD-------VAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + F D VA+K+L E + R E
Sbjct: 15 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKML-KEGATHSEHRALMSE 73
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQK 337
+ I+ + H+NVV +GACT+P L ++ EF G++ YL ++
Sbjct: 74 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 120
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 340 LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L L L+ + V+KGM +L IHRDL A N+L++E V
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ--KCGLKLP--LLLRVAID 351
MR V V F GA R ++I E M + D +KQ G +P +L ++A+
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 352 VSKGMNYLHRN-NIIHRDLKAANLLMNENG 380
+ K + +LH ++IHRD+K +N+L+N G
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALG 147
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 256 GSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACT 312
GS C AF ++ VA+K L+ + + +E+ +++ ++H NV+ + T
Sbjct: 36 GSVC----AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 91
Query: 313 RPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNII 365
P R +++VT M G + + + QK L + + + +G+ Y+H +II
Sbjct: 92 -PARSLEEFNDVYLVTHLM-GADLNNIVKXQK--LTDDHVQFLIYQILRGLKYIHSADII 147
Query: 366 HRDLKAANLLMNEN 379
HRDLK +NL +NE+
Sbjct: 148 HRDLKPSNLAVNED 161
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKXQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ I SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 22 IWEVPERYQNLS-PIGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 80 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 135
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 296 MRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ--KCGLKLP--LLLRVAID 351
MR V V F GA R ++I E M + D +KQ G +P +L ++A+
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVS 161
Query: 352 VSKGMNYLHRN-NIIHRDLKAANLLMNENG 380
+ K + +LH ++IHRD+K +N+L+N G
Sbjct: 162 IVKALEHLHSKLSVIHRDVKPSNVLINALG 191
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAI 350
E+H+ + H N+V + L++VT FM+ GS D + G+ + +
Sbjct: 60 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 119
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
V K ++Y+H +HR +KA+++L++ +G
Sbjct: 120 GVLKALDYIHHMGYVHRSVKASHILISVDG 149
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAI 350
E+H+ + H N+V + L++VT FM+ GS D + G+ + +
Sbjct: 76 ELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ 135
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
V K ++Y+H +HR +KA+++L++ +G
Sbjct: 136 GVLKALDYIHHMGYVHRSVKASHILISVDG 165
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 23 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 81 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 136
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 19 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 77 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 132
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 36 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 94 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 149
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 29 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 87 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 142
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 23 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 81 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 136
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 37 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 95 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 150
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 40 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 98 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 153
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 36 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 94 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 149
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 180
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 37 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 95 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 150
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 24 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 82 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 137
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 24 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 82 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 137
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 13 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 71 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 126
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 23 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 81 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 136
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDS 168
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 19 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 77 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 132
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 22 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 80 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 135
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 14 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 72 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 127
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 16 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 74 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 129
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 160
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 19 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 77 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 132
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 22 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 80 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 135
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 14 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 72 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 127
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 158
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 29 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 87 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 142
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 251 HKIVS-GSYCDLY--KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
H+I+ G + ++Y + A + A+K L + + A IM + F
Sbjct: 193 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 308 IGACT----RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV-AIDVSKGMNYLHRN 362
I + P +L + + M+GG ++ +L + G+ +R A ++ G+ ++H
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR 310
Query: 363 NIIHRDLKAANLLMNENG-VRDSDI 386
+++RDLK AN+L++E+G VR SD+
Sbjct: 311 FVVYRDLKPANILLDEHGHVRISDL 335
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGAC--TRPPRLFIVTEFMSGG--SIYDYLHKQKCGLKLPLLL 346
+E+ ++R++RH NV+Q + ++++V E+ G + D + +++ P+
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR----FPVCQ 110
Query: 347 RVA--IDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
+ G+ YLH I+H+D+K NLL+ G
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT 147
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 13 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 71 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 126
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 24 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 82 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 137
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 29 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 87 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 142
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 251 HKIVS-GSYCDLY--KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
H+I+ G + ++Y + A + A+K L + + A IM + F
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 308 IGACT----RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV-AIDVSKGMNYLHRN 362
I + P +L + + M+GG ++ +L + G+ +R A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR 311
Query: 363 NIIHRDLKAANLLMNENG-VRDSDI 386
+++RDLK AN+L++E+G VR SD+
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDL 336
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 251 HKIVS-GSYCDLY--KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
H+I+ G + ++Y + A + A+K L + + A IM + F
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 308 IGACT----RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV-AIDVSKGMNYLHRN 362
I + P +L + + M+GG ++ +L + G+ +R A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR 311
Query: 363 NIIHRDLKAANLLMNENG-VRDSDI 386
+++RDLK AN+L++E+G VR SD+
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDL 336
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 18/134 (13%)
Query: 256 GSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACT 312
GS C AF ++ VA+K L+ + + +E+ +++ ++H NV+ + T
Sbjct: 46 GSVC----AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 101
Query: 313 RPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNII 365
P R +++VT M G + + + QK L + + + +G+ Y+H +II
Sbjct: 102 -PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADII 157
Query: 366 HRDLKAANLLMNEN 379
HRDLK +NL +NE+
Sbjct: 158 HRDLKPSNLAVNED 171
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 37 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 95 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 150
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 181
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 17 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 75 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 130
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 15 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 73 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 128
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 159
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 23 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 81 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 136
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 167
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 19 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 77 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 132
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 163
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 24 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 82 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 137
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 168
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 13 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 71 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 126
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 251 HKIVS-GSYCDLY--KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
H+I+ G + ++Y + A + A+K L + + A IM + F
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 308 IGACT----RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV-AIDVSKGMNYLHRN 362
I + P +L + + M+GG ++ +L + G+ +R A ++ G+ ++H
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR 311
Query: 363 NIIHRDLKAANLLMNENG-VRDSDI 386
+++RDLK AN+L++E+G VR SD+
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDL 336
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 22 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 80 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 135
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 166
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 28 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 86 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 141
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 28 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 86 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 141
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 172
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 40 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M G + + + QK L + +
Sbjct: 98 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFL 153
Query: 349 AIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNED 184
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
LF V E+++GG + H Q C L A ++ G+ +LH I++RDLK N+L
Sbjct: 94 LFFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 376 MNENG 380
++++G
Sbjct: 152 LDKDG 156
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 251 HKIVS-GSYCDLYKGAF--FSQDVAIKVLTNE--HLNENIRREFAQEVHIMRKVRHMNVV 305
HK++ GS+ ++ F +Q AIK L + +++++ ++ + H +
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT 81
Query: 306 QFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKC-GLKLPLLLRVAIDVSKGMNYLHRNNI 364
LF V E+++GG + H Q C L A ++ G+ +LH I
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLM--YHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 139
Query: 365 IHRDLKAANLLMNENG 380
++RDLK N+L++++G
Sbjct: 140 VYRDLKLDNILLDKDG 155
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 29/143 (20%)
Query: 250 EHKIVSGSYCDLYKGAFFSQDVAIK-----VLTNEHLNENIRREFAQEVHIMRKVRHMNV 304
EH I G+ D+ + ++ DV IK +E L+ENIR+ R+ R++ +
Sbjct: 341 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKS-----RTAREARYLAL 395
Query: 305 VQFIGACTRPPRLF--------IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
V+ G P +F I+ +++G D + L +A + + +
Sbjct: 396 VKDFGIPA--PYIFDVDLDNKRIMMSYINGKLAKDVIEDN---------LDIAYKIGEIV 444
Query: 357 NYLHRNNIIHRDLKAANLLMNEN 379
LH+N++IH DL +N + +++
Sbjct: 445 GKLHKNDVIHNDLTTSNFIFDKD 467
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLYQML---XGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 29/143 (20%)
Query: 250 EHKIVSGSYCDLYKGAFFSQDVAIK-----VLTNEHLNENIRREFAQEVHIMRKVRHMNV 304
EH I G+ D+ + ++ DV IK +E L+ENIR+ R+ R++ +
Sbjct: 336 EHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKS-----RTAREARYLAL 390
Query: 305 VQFIGACTRPPRLF--------IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGM 356
V+ G P +F I+ +++G D + L +A + + +
Sbjct: 391 VKDFGIPA--PYIFDVDLDNKRIMMSYINGKLAKDVIEDN---------LDIAYKIGEIV 439
Query: 357 NYLHRNNIIHRDLKAANLLMNEN 379
LH+N++IH DL +N + +++
Sbjct: 440 GKLHKNDVIHNDLTTSNFIFDKD 462
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
RL+ V E+++GG + H Q+ G K P + A +++ G+ +L II+RDLK N+
Sbjct: 95 RLYFVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV 152
Query: 375 LMNENG 380
+++ G
Sbjct: 153 MLDSEG 158
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQML---VGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNENGV 381
K +N+++ +
Sbjct: 153 KPSNIVVKSDAT 164
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQML---VGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNENGV 381
K +N+++ +
Sbjct: 153 KPSNIVVKSDAT 164
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+ A K++ + L+ ++ +E I RK++H N+V+ + ++V + ++GG +
Sbjct: 33 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVS-------KGMNYLHRNNIIHRDLKAANLLM 376
++ + ++ D S + + Y H N I+HR+LK NLL+
Sbjct: 93 FEDIVARE--------FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLL 138
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 256 GSYCDLY--KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTR 313
GS C Y K +A+K L+ + + +E+ +++ ++H NV+ + T
Sbjct: 65 GSVCSSYDVKSGL---KIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 121
Query: 314 PPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHR 367
L ++VT M G + + + QK L + + + +G+ Y+H +IIHR
Sbjct: 122 ATSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIHSADIIHR 178
Query: 368 DLKAANLLMNEN 379
DLK +NL +NE+
Sbjct: 179 DLKPSNLAVNED 190
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 3/66 (4%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANL 374
RL+ V E+++GG + H Q+ G K P + A +++ G+ +L II+RDLK N+
Sbjct: 416 RLYFVMEYVNGGDLM--YHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNV 473
Query: 375 LMNENG 380
+++ G
Sbjct: 474 MLDSEG 479
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 62/127 (48%), Gaps = 11/127 (8%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF + A K++ + L+ ++ +E I RK++H N+V+
Sbjct: 13 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
+ ++V + ++GG +++ + ++ + + + + + Y H N I+HR+L
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHSNGIVHRNL 131
Query: 370 KAANLLM 376
K NLL+
Sbjct: 132 KPENLLL 138
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 239 VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD---VAIKVLTNEHLNENIRREFAQEVHI 295
+WE+ + SG+Y + AF ++ VA+K L+ + + +E+ +
Sbjct: 13 IWEVPERYQNLS-PVGSGAYGSVC-AAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 296 MRKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
++ ++H NV+ + T P R +++VT M D + KC ++
Sbjct: 71 LKHMKHENVIGLLDVFT-PARSLEEFNDVYLVTHLMGA----DLNNIVKCAKLTDDHVQF 125
Query: 349 AI-DVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
I + +G+ Y+H +IIHRDLK +NL +NE+
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNENGV 381
K +N+++ +
Sbjct: 153 KPSNIVVKSDAT 164
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/107 (22%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI 329
+ A K++ + L+ ++ +E I RK++H N+V+ + ++V + ++GG +
Sbjct: 32 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 330 YDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
++ + ++ + + + + + Y H N I+HR+LK NLL+
Sbjct: 92 FEDIVAREFYSEADASHCIQ-QILESIAYCHSNGIVHRNLKPENLLL 137
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 70 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 125
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 70 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 125
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 271 VAIKVLTN-EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEF 323
VAIK ++ EH + + +E+ I+ + RH N++ I R P + +IV +
Sbjct: 55 VAIKKISPFEH--QTYXQRTLREIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDL 111
Query: 324 MSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
M +Y L Q L + + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 112 MET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 72 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 127
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 113
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 70 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 125
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 78 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 133
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 166
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 70 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 125
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 70 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 125
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 25/105 (23%)
Query: 291 QEVHIMRKVRHMNVVQF--------------IGACTRPPRLFIVTEFMSGGSIYDYLHKQ 336
+E+ I+R++ H N+V+ +G+ T ++IV E+M D +
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME----TDLANVL 112
Query: 337 KCGLKLPLLLRVA----IDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ G PLL A + +G+ Y+H N++HRDLK ANL +N
Sbjct: 113 EQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 68 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 123
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 68 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 123
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 74 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 129
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 75 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 130
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 76 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 131
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 164
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 67 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 122
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 155
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 74 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 129
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNENGV 381
K +N+++ +
Sbjct: 153 KPSNIVVKSDAT 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 116
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 117 IVSALEYLHSRDVVYRDIKLENLMLDKDG 145
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 74 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 129
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 118
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 119 IVSALEYLHSRDVVYRDIKLENLMLDKDG 147
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 74 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 129
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 75 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 130
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 113
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 90 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 145
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 113
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 113
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLYQML---XGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 31 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 90 TLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLYQML---XGIKHLHSAGIIHRDL 145
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 146 KPSNIVVKSD 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 25/134 (18%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF + A K++ + L+ ++ +E I RK++H N+V+
Sbjct: 36 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 310 ACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVS-------KGMNYLHRN 362
+ ++V + ++GG +++ + ++ D S + + Y H N
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVARE--------FYSEADASHCIQQILESIAYCHSN 147
Query: 363 NIIHRDLKAANLLM 376
I+HR+LK NLL+
Sbjct: 148 GIVHRNLKPENLLL 161
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + A RL V E+ +GG ++ +L +++ + A +
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-E 113
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ + YLH ++++RD+K NL+++++G
Sbjct: 114 IVSALEYLHSRDVVYRDIKLENLMLDKDG 142
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 288 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI-YDYLHKQKCGL--KLPL 344
+ +E I ++H ++V+ + + L++V EFM G + ++ + + G +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ + + Y H NNIIHRD+K N+L+
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLL 163
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF Q+ A K++ + L+ ++ +E I R ++H N+V+
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 310 ACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ + +++ + ++GG ++ +Y + + +L + + H+
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMG 141
Query: 364 IIHRDLKAANLLM 376
++HRDLK NLL+
Sbjct: 142 VVHRDLKPENLLL 154
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 40 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 98
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 99 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 154
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 155 KPSNIVVKSD 164
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 268 SQDV-AIKVLTN-EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMS 325
SQ V A+K+L+ E + + F +E IM VVQ A L++V E+M
Sbjct: 99 SQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMP 158
Query: 326 GGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSD 385
GG + + + K +V ++ +H +IHRD+K N+L++++G
Sbjct: 159 GGDLVNLMSNYDVPEKWAKFYTA--EVVLALDAIHSMGLIHRDVKPDNMLLDKHG----- 211
Query: 386 IHCYLSNF 393
H L++F
Sbjct: 212 -HLKLADF 218
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 39 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 97
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 98 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 153
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 154 KPSNIVVKSD 163
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 32 GIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 90
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 91 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 146
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 147 KPSNIVVKSD 156
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 43 GIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 101
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 102 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 157
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 158 KPSNIVVKSD 167
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ + RH N++ I R P + +IV + M +Y L Q L
Sbjct: 74 REIKILLRFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKCQH--LSNDH 129
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L +IV E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 15/144 (10%)
Query: 252 KIVSGSYCDLYKG-----AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVR---HMN 303
+I G+Y +YK F +++V + +EV ++R++ H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 304 VVQFIGACT-----RPPRLFIVTEFMSGGSIYDYLHK-QKCGLKLPLLLRVAIDVSKGMN 357
VV+ + C R ++ +V E + + YL K GL + + +G++
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 358 YLHRNNIIHRDLKAANLLMNENGV 381
+LH N I+HRDLK N+L+ G
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGT 158
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ RH N++ I R P + +IV + M +Y L Q L
Sbjct: 72 REIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 127
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEFMSGGSIYDYLHKQKCGLKLPL 344
+E+ I+ RH N++ I R P + +IV + M +Y L Q L
Sbjct: 72 REIKILLAFRHENIIG-INDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQH--LSNDH 127
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ + +G+ Y+H N++HRDLK +NLL+N
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 258 YCDLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQF 307
Y D+ KGAF + A K++ + L+ ++ +E I R ++H N+V+
Sbjct: 9 YEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 308 IGACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
+ + ++V + ++GG ++ +Y + + +L + + H+
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQ 121
Query: 362 NNIIHRDLKAANLLM 376
++HRDLK NLL+
Sbjct: 122 MGVVHRDLKPENLLL 136
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 265 AFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL------F 318
A ++VAIK L+ N+ + +E+ +M+ V H N++ + T L +
Sbjct: 46 AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVY 105
Query: 319 IVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
IV E M ++ + + ++ LL + G+ +LH IIHRDLK +N+++
Sbjct: 106 IVMELMDA-NLSQVIQMELDHERMSYLLYQML---VGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 379 NGV 381
+
Sbjct: 162 DAT 164
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 291 QEVHIMRKVRHMNVV---QFIGACTRPPR--LFIVTEFMSGGSIYDYLHKQKCGLKLPLL 345
+E+ I+ + RH NV+ + A T ++IV + M +Y L Q+ L +
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQ--LSNDHI 146
Query: 346 LRVAIDVSKGMNYLHRNNIIHRDLKAANLLMN 377
+ +G+ Y+H N++HRDLK +NLL+N
Sbjct: 147 CYFLYQILRGLKYIHSANVLHRDLKPSNLLIN 178
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 76 GIVCAAYD-AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 134
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 135 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 190
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 191 KPSNIVVKSD 200
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Query: 248 KFEHKIVSGSYCDLYKGAFFS--QDVAIKV--LTNEHLNENIRREFAQEVHIMRKVRHMN 303
+ KI SGS+ D+Y GA + ++VAIK+ + +H +I +F + +M+ +
Sbjct: 12 RLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYK---MMQGGVGIP 68
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+++ GA +V E + G S+ D + L +L +A + + Y+H N
Sbjct: 69 SIKWCGA--EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 125
Query: 364 IIHRDLKAANLLMN 377
IHRD+K N LM
Sbjct: 126 FIHRDVKPDNFLMG 139
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 37 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 95
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 96 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 151
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 152 KPSNIVVKSD 161
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 39 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 97
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 98 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 153
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 154 KPSNIVVKSD 163
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 38 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 96
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 97 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 152
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 153 KPSNIVVKSD 162
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 135
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL++E G
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQG 165
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 39 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 97
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 98 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 153
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 154 KPSNIVVKSD 163
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 32 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 90
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 91 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 146
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 147 KPSNIVVKSD 156
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 32 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 90
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 91 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 146
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 147 KPSNIVVKSD 156
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 31 GIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 90 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 145
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 146 KPSNIVVKSD 155
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 256 GSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPP 315
G C Y A ++VAIK L+ N+ + +E+ +M+ V H N++ + T
Sbjct: 76 GIVCAAYD-AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 134
Query: 316 RL------FIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDL 369
L ++V E M ++ + + ++ LL + G+ +LH IIHRDL
Sbjct: 135 TLEEFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQML---CGIKHLHSAGIIHRDL 190
Query: 370 KAANLLMNEN 379
K +N+++ +
Sbjct: 191 KPSNIVVKSD 200
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 272 AIKVLTN-EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
A+K+L+ E + + F +E IM VVQ A L++V E+M GG +
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
+ + K +V ++ +H IHRD+K N+L++++G H L
Sbjct: 163 NLMSNYDVPEKWARFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG------HLKL 214
Query: 391 SNF 393
++F
Sbjct: 215 ADF 217
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+M GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+M GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 272 AIKVLTN-EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
A+K+L+ E + + F +E IM VVQ A L++V E+M GG +
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
+ + K +V ++ +H IHRD+K N+L++++G H L
Sbjct: 158 NLMSNYDVPEKWARFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG------HLKL 209
Query: 391 SNF 393
++F
Sbjct: 210 ADF 212
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 272 AIKVLTN-EHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY 330
A+K+L+ E + + F +E IM VVQ A L++V E+M GG +
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 331 DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYL 390
+ + K +V ++ +H IHRD+K N+L++++G H L
Sbjct: 163 NLMSNYDVPEKWARFY--TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG------HLKL 214
Query: 391 SNF 393
++F
Sbjct: 215 ADF 217
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 253 IVSGSYCDLYKGAFFSQD-VAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQ----F 307
I +GS+ +++ D VAIK + + +N +E+ IMR V+H NVV F
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN------RELQIMRIVKHPNVVDLKAFF 101
Query: 308 IGACTRPPRLFI--VTEFMSGGSIYDYLHKQKCGLKLPLLL--RVAIDVSKGMNYLHRNN 363
+ +F+ V E++ H K +P+LL + + + Y+H
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG 161
Query: 364 IIHRDLKAANLLMN 377
I HRD+K NLL++
Sbjct: 162 ICHRDIKPQNLLLD 175
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 297 RKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ--KCGLKLP--LLLRVAIDV 352
R V V F GA R ++I E + D +KQ G +P +L ++A+ +
Sbjct: 88 RTVDCPFTVTFYGALFREGDVWICXELXD--TSLDKFYKQVIDKGQTIPEDILGKIAVSI 145
Query: 353 SKGMNYLHRN-NIIHRDLKAANLLMNENG 380
K + +LH ++IHRD+K +N+L+N G
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALG 174
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 256 GSYCDLYKGAFF--SQDVAIKVLTNEHL-NENIRREFAQEVHIMRKVRHMNVVQFIGACT 312
GS+ +Y+ +VAIK++ + + + + EV I +++H ++++
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 313 RPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAA 372
+++V E G + YL + + GM YLH + I+HRDL +
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLS 141
Query: 373 NLLMNEN 379
NLL+ N
Sbjct: 142 NLLLTRN 148
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 304 VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLP--LLLRVAIDVSKGMNYL-H 360
+VQ G +FI E M G+ + L K+ G +P +L ++ + + K + YL
Sbjct: 86 IVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQG-PIPERILGKMTVAIVKALYYLKE 142
Query: 361 RNNIIHRDLKAANLLMNENG 380
++ +IHRD+K +N+L++E G
Sbjct: 143 KHGVIHRDVKPSNILLDERG 162
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAA 143
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 173
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGV 381
L+ + V++GM +L IHRDL A N+L++EN V
Sbjct: 201 LISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV 237
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 240 WEIDASLLKFEHKIVSGSYCDLYKGAFFS-------QDVAIKVLTNEHLNENIRREFAQE 292
WE LK + G++ + + + F + VA+K+L E + + E
Sbjct: 22 WEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKML-KEGATASEYKALMTE 80
Query: 293 VHIMRKV-RHMNVVQFIGACTRPPR-LFIVTEFMSGGSIYDYLHKQK 337
+ I+ + H+NVV +GACT+ L ++ E+ G++ +YL ++
Sbjct: 81 LKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKR 127
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 246 LLKFEHKIVSGSYCDLYKGAFFSQDVAIKVLT-NEHLNENIRREFAQEVHIMRKVRHMNV 304
L F+ K+ SG++ D++ S + + T N+ ++ + E+ +++ + H N+
Sbjct: 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMN---YLHR 361
++ ++IV E GG + + + + K VA + + MN Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 362 NNIIHRDLKAANLLMNEN 379
+++H+DLK N+L +
Sbjct: 143 QHVVHKDLKPENILFQDT 160
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAI 350
E I++ V +V+ + L++V E+++GG ++ +L ++ G P A
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAA 148
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
+ YLH ++I+RDLK NLL+++ G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 137 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 376 MNENG 380
+++ G
Sbjct: 195 IDQQG 199
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 137 LYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 376 MNENG 380
+++ G
Sbjct: 195 IDQQG 199
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 12/102 (11%)
Query: 294 HIMRKVRHMNVVQ---FIGACTR--PPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRV 348
+ +V H ++VQ F+ R P +IV E++ G S+ K+ G KLP+ +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAI 185
Query: 349 A--IDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHC 388
A +++ ++YLH +++ DLK N+++ E ++ D+
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGA 227
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 43/85 (50%)
Query: 291 QEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAI 350
+E+ I+ RH N++ + L ++ EF+SG I++ ++ L ++
Sbjct: 50 KEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVH 109
Query: 351 DVSKGMNYLHRNNIIHRDLKAANLL 375
V + + +LH +NI H D++ N++
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPENII 134
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 248 KFEHKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMN-- 303
+ KI SGS+ D+Y G + ++VAIK+ E ++ + Q +HI K+ M
Sbjct: 12 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-------ECVKTKHPQ-LHIESKIYKMMQG 63
Query: 304 --VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
+ I C ++ + G S+ D + L +L +A + + Y+H
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123
Query: 362 NNIIHRDLKAANLLMN 377
N IHRD+K N LM
Sbjct: 124 KNFIHRDVKPDNFLMG 139
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 233 PAEGIDVWEIDASLLKFEHKIVSGS--YCDLYKGAFFSQDV-----------AIKVLTNE 279
P++ E++ SL K +H++ Y L F + + A+K+L E
Sbjct: 128 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE 187
Query: 280 HLNENIRREFAQ---EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ 336
+ + E A E +++ RH + + RL V E+ +GG ++ +L ++
Sbjct: 188 VIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 245
Query: 337 KCGLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANLLMNENG 380
+ ++ ++YLH N+++RDLK NL+++++G
Sbjct: 246 RV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 289
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 102 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 159
Query: 376 MNENG 380
+++ G
Sbjct: 160 IDQQG 164
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEF 323
+VA+K L+ N+ + +E+ +++ V H N++ + T L ++V E
Sbjct: 49 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 108
Query: 324 MSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
M ++ +H + ++ LL + G+ +LH IIHRDLK +N+++ +
Sbjct: 109 MDA-NLCQVIHMELDHERMSYLLYQML---CGIKHLHSAGIIHRDLKPSNIVVKSD 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 47/78 (60%), Gaps = 7/78 (8%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
+L ++ ++++GG ++ +L +++ + + + V ++ + +LH+ II+RD+K N+L
Sbjct: 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHKLGIIYRDIKLENIL 191
Query: 376 MNENGVRDSDIHCYLSNF 393
++ NG H L++F
Sbjct: 192 LDSNG------HVVLTDF 203
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 233 PAEGIDVWEIDASLLKFEHKIVSGS--YCDLYKGAFFSQDV-----------AIKVLTNE 279
P++ E++ SL K +H++ Y L F + + A+K+L E
Sbjct: 125 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKE 184
Query: 280 HLNENIRREFAQ---EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQ 336
+ + E A E +++ RH + + RL V E+ +GG ++ +L ++
Sbjct: 185 VIV--AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 242
Query: 337 KCGLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANLLMNENG 380
+ ++ ++YLH N+++RDLK NL+++++G
Sbjct: 243 RV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG 286
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 109 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 166
Query: 376 MNENG 380
+++ G
Sbjct: 167 IDQQG 171
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 109 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 166
Query: 376 MNENG 380
+++ G
Sbjct: 167 IDQQG 171
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 270 DVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRL------FIVTEF 323
+VA+K L+ N+ + +E+ +++ V H N++ + T L ++V E
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 324 MSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
M ++ +H + ++ LL + G+ +LH IIHRDLK +N+++ +
Sbjct: 111 MDA-NLCQVIHMELDHERMSYLLYQML---CGIKHLHSAGIIHRDLKPSNIVVKSD 162
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 248 KFEHKIVSGSYCDLYKGAFFS--QDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMN-- 303
+ KI SGS+ D+Y G + ++VAIK+ E ++ + Q +HI K+ M
Sbjct: 10 RLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-------ECVKTKHPQ-LHIESKIYKMMQG 61
Query: 304 --VVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHR 361
+ I C ++ + G S+ D + L +L +A + + Y+H
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 121
Query: 362 NNIIHRDLKAANLLMN 377
N IHRD+K N LM
Sbjct: 122 KNFIHRDVKPDNFLMG 137
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 116 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 137 LYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 376 MNENG 380
+++ G
Sbjct: 195 IDQQG 199
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+++GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLI 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E++ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 288 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI-YDYLHKQKCGL--KLPL 344
+ +E I ++H ++V+ + + L++V EFM G + ++ + + G +
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ + + Y H NNIIHRD+K +L+
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 292 EVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAID 351
E +++ RH + + RL V E+ +GG ++ +L +++ +
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV-FSEDRARFYGAE 116
Query: 352 VSKGMNYLH-RNNIIHRDLKAANLLMNENG 380
+ ++YLH N+++RDLK NL+++++G
Sbjct: 117 IVSALDYLHSEKNVVYRDLKLENLMLDKDG 146
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NLL
Sbjct: 117 LYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANL 374
RL V E+ +GG ++ +L +++ ++ ++YLH N+++RDLK NL
Sbjct: 84 RLCFVMEYANGGELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 142
Query: 375 LMNENG 380
+++++G
Sbjct: 143 MLDKDG 148
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANL 374
RL V E+ +GG ++ +L +++ ++ ++YLH N+++RDLK NL
Sbjct: 83 RLCFVMEYANGGELFFHLSRERV-FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 141
Query: 375 LMNENG 380
+++++G
Sbjct: 142 MLDKDG 147
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 252 KIVSGSYCDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQ----F 307
K+ G+Y +YK + I +E+ ++R+++H NV+ F
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 308 IGACTRPPRLFIVTEFMSGGSIYDYLH---------KQKCGLKLP--LLLRVAIDVSKGM 356
+ R +++++ ++ +D H K ++LP ++ + + G+
Sbjct: 88 LSHADR--KVWLLFDYAE----HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 357 NYLHRNNIIHRDLKAANLLMNENG 380
+YLH N ++HRDLK AN+L+ G
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEG 165
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 288 EFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSI-YDYLHKQKCGL--KLPL 344
+ +E I ++H ++V+ + + L++V EFM G + ++ + + G +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 345 LLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
+ + + Y H NNIIHRD+K +L+
Sbjct: 134 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 34/168 (20%)
Query: 226 GINHVNIPAEGIDVWEIDASLLKFEHKIVSGSYCDLYKG--AFFSQDVAIKVLTNEHLNE 283
GI +V++P I +H I GSY +Y ++VAIK
Sbjct: 18 GIKNVHVPDNYI-----------IKHLIGRGSYGYVYLAYDKNTEKNVAIK--------- 57
Query: 284 NIRREFAQEVHIMRKVRHMNVVQFIGA--CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK 341
+ R F + R +R + ++ + + R L I + + +Y L LK
Sbjct: 58 KVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLK 117
Query: 342 ----LPLLLR------VAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
P+ L + ++ G N++H + IIHRDLK AN L+N++
Sbjct: 118 KLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQD 165
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/133 (19%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 260 DLYKGAF----------FSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIG 309
+L KGAF Q+ A ++ + L+ ++ +E I R ++H N+V+
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 77
Query: 310 ACTRPPRLFIVTEFMSGGSIY------DYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNN 363
+ + +++ + ++GG ++ +Y + + +L + + H+
Sbjct: 78 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL-------HCHQMG 130
Query: 364 IIHRDLKAANLLM 376
++HR+LK NLL+
Sbjct: 131 VVHRNLKPENLLL 143
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 339 GLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANLLMNEN 379
GL LP + ++ V +G++YLH + IIH D+K N+L++ N
Sbjct: 142 GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 183
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 117 LYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 376 MNENG 380
+++ G
Sbjct: 175 IDQQG 179
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCG-LKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L++V E+ GG ++ +L ++ G P A + YLH ++I+RDLK NL+
Sbjct: 116 LYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 376 MNENG 380
+++ G
Sbjct: 174 IDQQG 178
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 339 GLKLPLLLRVAIDVSKGMNYLH-RNNIIHRDLKAANLLMNEN 379
GL LP + ++ V +G++YLH + IIH D+K N+L++ N
Sbjct: 126 GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN 167
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 317 LFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L I+ E M GG ++ + ++ + D+ + +LH +NI HRD+K NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 376 MNENGVRDSDIHCYLSNF 393
++ D L++F
Sbjct: 161 YTS---KEKDAVLKLTDF 175
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 317 LFIVTEFMSGGSIYDYLHKQ-KCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
L I+ E M GG ++ + ++ + D+ + +LH +NI HRD+K NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 319 IVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
IV E + G S YD++ + +L + ++A + K +N+LH N + H DLK N+L
Sbjct: 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 319 IVTEFMSGGSIYDYLHKQK-CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
IV E + G S YD++ + +L + ++A + K +N+LH N + H DLK N+L
Sbjct: 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
+ + LH +N+IHRDLK +NLL+N N
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSN 148
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 43 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 97
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 98 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 145
Query: 334 -HKQKCGLKLPLL-LRVAI-DVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ +++ + + + + Y+H I HRD+K NLL++ +
Sbjct: 146 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 194
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 41 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 95
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 96 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 192
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 35 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 89
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 90 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 137
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 138 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 186
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
+ + LH +N+IHRDLK +NLL+N N
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSN 148
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 354 KGMNYLHRNNIIHRDLKAANLLMNEN 379
+ + LH +N+IHRDLK +NLL+N N
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSN 148
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 41 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 95
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 96 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 143
Query: 334 -HKQKCGLKLPLL-LRVAI-DVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ +++ + + + + Y+H I HRD+K NLL++ +
Sbjct: 144 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 192
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 45 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 99
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 100 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 147
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 148 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 196
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 86 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 140
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 141 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 188
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 189 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 237
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 12 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 66
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 67 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 114
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 115 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 163
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 15 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 69
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 70 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 117
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 118 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 166
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 19 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 73
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 74 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 170
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 20 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 74
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 75 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 122
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 123 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 171
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 19 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 73
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 74 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 121
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 122 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 170
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 35.4 bits (80), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 26 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 80
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 81 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 128
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 129 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 177
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 8 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 62
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 63 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 110
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 111 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 159
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 11 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 65
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 66 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 113
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 114 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 162
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENG 380
L +L +AI + M Y+H N+I+RD+K N L+ G
Sbjct: 96 LKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQG 134
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDVVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V + G C + + V E + G S+ D L +L +AI + M Y+H N+
Sbjct: 70 VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 365 IHRDLKAANLLMNENGVRDSDI 386
I+RD+K N L+ G + +
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQV 148
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V + G C + + V E + G S+ D L +L +AI + M Y+H N+
Sbjct: 91 VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 147
Query: 365 IHRDLKAANLLMNENGVRDSDI 386
I+RD+K N L+ G + +
Sbjct: 148 IYRDVKPENFLIGRPGNKTQQV 169
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 305 VQFIGACTRPPRLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
V + G C + + V E + G S+ D L +L +AI + M Y+H N+
Sbjct: 70 VYYFGPCGKYNAM--VLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126
Query: 365 IHRDLKAANLLMNENGVRDSDI 386
I+RD+K N L+ G + +
Sbjct: 127 IYRDVKPENFLIGRPGNKTQQV 148
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 16/150 (10%)
Query: 240 WEIDASLLKFEHKIVSGSY---CDLYKGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIM 296
W+I + H I +GSY C+ Y + VAIK + + + +E+ I+
Sbjct: 49 WQI-PDRYEIRHLIGTGSYGHVCEAY-DKLEKRVVAIKKILRVFEDLIDCKRILREIAIL 106
Query: 297 RKVRHMNVVQFIGACTRPPR-------LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVA 349
++ H +VV+ + P+ L++V E S + L + L + +
Sbjct: 107 NRLNHDHVVKVLDIVI--PKDVEKFDELYVVLEI--ADSDFKKLFRTPVYLTELHIKTLL 162
Query: 350 IDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
++ G+ Y+H I+HRDLK AN L+N++
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLVNQD 192
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 230 VNIPAEGID-VWEIDASLLKFEHKIVSGSYCDLYKGAFFSQD--VAIKVLTNEHLNENIR 286
V P +G D E+ + K I +GS+ +Y+ VAIK + +N
Sbjct: 7 VATPGQGPDRPQEVSYTDTKV---IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-- 61
Query: 287 REFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGGSIY-----DYL-------- 333
+E+ IMRK+ H N+V+ R F + +Y DY+
Sbjct: 62 ----RELQIMRKLDHCNIVRL--------RYFFYSSGEKKDEVYLNLVLDYVPATVYRVA 109
Query: 334 -HKQKCGLKLPLLL--RVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
H + LP++ + + + Y+H I HRD+K NLL++ +
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD 158
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQ------EVHIMRKVRHMNVVQFIGACTRPPRLFIVT 321
+++V +K + E + E+ E + E+ I+ +V H N+++ + +V
Sbjct: 49 NKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVM 108
Query: 322 E-FMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNEN 379
E SG ++ ++ + L PL + + + YL +IIHRD+K N+++ E+
Sbjct: 109 EKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAED 166
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 248 KFEHKIVSGSYCDLY----KGAFFSQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMN 303
+ +H I GSY +Y K A +++VAIK + R F + R +R +
Sbjct: 31 EIKHLIGRGSYGYVYLAYDKNA--NKNVAIK---------KVNRMFEDLIDCKRILREIT 79
Query: 304 VVQFIGA--CTRPPRLFIVTEFMSGGSIYDYLHKQKCGLK----LPLLLR------VAID 351
++ + + R L I + + +Y L LK P+ L + +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYN 139
Query: 352 VSKGMNYLHRNNIIHRDLKAANLLMNEN 379
+ G ++H + IIHRDLK AN L+N++
Sbjct: 140 LLLGEKFIHESGIIHRDLKPANCLLNQD 167
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 268 SQDVAIKVLTNEHLNENIRREFAQEVHIMRKVRHMNVVQFIGACTRPPRLFIVTEFMSGG 327
+Q A+K+++ + + N ++E + H N+V+ F+V E ++GG
Sbjct: 36 NQAFAVKIIS-KRMEANTQKEITA---LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91
Query: 328 SIYDYLHKQK--CGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNE 378
+++ + K+K + ++R + ++++H ++HRDLK NLL +
Sbjct: 92 ELFERIKKKKHFSETEASYIMRKLVSA---VSHMHDVGVVHRDLKPENLLFTD 141
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 336 QKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVRDSDIHCYLSNF 393
Q K +L++ I + + Y+H N +H D+KAANLL+ G ++ D YL+++
Sbjct: 144 QNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL---GYKNPD-QVYLADY 197
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 255 SGSYCDLYKGAFFSQD--VAIKVLTNEHLNE-----NIRREFAQEVHIMRKVRH--MNVV 305
SG + +Y G S + VAIK + + +++ N R EV +++KV V+
Sbjct: 18 SGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVI 76
Query: 306 QFIGACTRPPRLFIVTEFMSG-GSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNI 364
+ + RP ++ E M ++D++ ++ L+ L V + + + H +
Sbjct: 77 RLLDWFERPDSFVLILERMEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGV 135
Query: 365 IHRDLKAANLLMNEN 379
+HRD+K N+L++ N
Sbjct: 136 LHRDIKDENILIDLN 150
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPL-LLRVAI-DVSKGMNYLHRNNIIHRDLKAANL 374
L++V E+ GG + L K G ++P + R + ++ ++ +HR +HRD+K N+
Sbjct: 136 LYLVMEYYVGGDLLTLL--SKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 375 LMNENGVRDSDIHCYLSNFLS 395
L++ G H L++F S
Sbjct: 194 LLDRCG------HIRLADFGS 208
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLHRNNIIHRDLKAA 372
L IV E + GG ++ + + R A ++ K + YLH NI HRD+K
Sbjct: 134 LLIVXECLDGGELFSRIQDRG---DQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPE 190
Query: 373 NLL 375
NLL
Sbjct: 191 NLL 193
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKL---PLLLRVAIDVSKGMNYLHRNNIIHRDLKAAN 373
L+I + ++ D++++ +C L+ + L + I +++ + +LH ++HRDLK +N
Sbjct: 136 LYIQMQLCRKENLKDWMNR-RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 374 LLMNENGV 381
+ + V
Sbjct: 195 IFFTMDDV 202
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
+L++VTE M + +H Q+ + + + G++ LH ++HRDL N+L
Sbjct: 108 KLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL 166
Query: 376 MNEN 379
+ +N
Sbjct: 167 LADN 170
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 316 RLFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLL 375
+L++VTE M + +H Q+ + + + G++ LH ++HRDL N+L
Sbjct: 108 KLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL 166
Query: 376 MNEN 379
+ +N
Sbjct: 167 LADN 170
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 342 LPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLMNENGVR 382
L +L +AI + M Y+H ++I+RD+K N L+ G +
Sbjct: 99 LKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTK 139
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLHRNNIIHRDLKAA 372
L IV E + GG ++ + + R A ++ K + YLH NI HRD+K
Sbjct: 96 LLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 152
Query: 373 NLL 375
NLL
Sbjct: 153 NLL 155
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLHRNNIIHRDLKAA 372
L IV E + GG ++ + + R A ++ K + YLH NI HRD+K
Sbjct: 94 LLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 150
Query: 373 NLL 375
NLL
Sbjct: 151 NLL 153
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSKGMNYLHRNNIIHRDLKAANLLM 376
L++V ++ GG + L K + L + ++ ++ +H+ + +HRD+K N+LM
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208
Query: 377 NENGVRDSDIHCYLSNFLS 395
+ NG H L++F S
Sbjct: 209 DMNG------HIRLADFGS 221
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLHRNNIIHRDLKAA 372
L IV E + GG ++ + + R A ++ K + YLH NI HRD+K
Sbjct: 88 LLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 144
Query: 373 NLL 375
NLL
Sbjct: 145 NLL 147
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 317 LFIVTEFMSGGSIYDYLHKQKCGLKLPLLLRVAIDVSK----GMNYLHRNNIIHRDLKAA 372
L IV E + GG ++ + + R A ++ K + YLH NI HRD+K
Sbjct: 95 LLIVMECLDGGELFSRIQDRG---DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPE 151
Query: 373 NLL 375
NLL
Sbjct: 152 NLL 154
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,658,641
Number of Sequences: 62578
Number of extensions: 472352
Number of successful extensions: 3095
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 1392
Number of HSP's gapped (non-prelim): 1099
length of query: 411
length of database: 14,973,337
effective HSP length: 101
effective length of query: 310
effective length of database: 8,652,959
effective search space: 2682417290
effective search space used: 2682417290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)